HHsearch alignment for GI: 254780346 and conserved domain: TIGR00114
>TIGR00114 lumazine-synth 6,7-dimethyl-8-ribityllumazine synthase; InterPro: IPR002180 This family includes the beta chain of 6,7-dimethyl-8-ribityllumazine synthase 2.5.1.9 from EC, an enzyme involved in riboflavin biosynthesis. The family also includes a subfamily of distant archaebacterial proteins that may also have the same function for example O28856 from SWISSPROT.; GO: 0004746 riboflavin synthase activity, 0009231 riboflavin biosynthetic process, 0009349 riboflavin synthase complex.
Probab=100.00 E-value=0 Score=317.82 Aligned_cols=138 Identities=31% Similarity=0.511 Sum_probs=130.6
Q ss_pred CEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEE----EEEHHHHHHHHHHHHHHHHHHH-CCCCCCEEEEEEEEECCCC
Q ss_conf 7179998031289999999999999998799555----5530014422699999986331-1378535665412000665
Q gi|254780346|r 6 PHVLIIEARFYENLSAMLFEGCVNVLHSRAVQWS----SIVTPGVLEIPAAVSMVMNAKT-RSVTYDGIIVLGVVMRGKT 80 (149)
Q Consensus 6 ~kI~IV~s~~~~~i~~~ll~ga~~~l~~~~~~~~----~i~VPGa~EiP~a~~~~~~~~~-~~~~~D~vIaLG~VIkGeT 80 (149)
T Consensus 1 ~rvg~v~ARFN~~It~~L~~gA~d~~~~~G~~~~~~i~~~~VPGafElP~~~~kL~~~~~klGkP~DAVi~LG~VIrG~T 80 (148)
T TIGR00114 1 VRVGIVIARFNRFITDKLLEGAIDALKRLGAEVDENIDVIRVPGAFELPLAVKKLAESGKKLGKPYDAVIALGAVIRGGT 80 (148)
T ss_pred CEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCEEEECCC
T ss_conf 92678771220689998999999999966895278635897068311268999998500201796335885114773796
Q ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCC----CCHHHHHHHHHHHHHH
Q ss_conf 24678999999999999974399705654255889999995065657----4569999999999999
Q gi|254780346|r 81 AHCDVIAHAVTRGLVDLSINGSLPIGNGIVVVDSEQQAFDRVSPSHL----DRGGCAARSALAMIEL 143 (149)
Q Consensus 81 ~H~e~I~~~v~~gl~~lsl~~~~PI~~gILt~~n~~QA~~R~~~~~~----nkG~eaa~Aal~mi~l 143 (149)
T Consensus 81 ~HfeyV~~~A~~gia~~a~~~~~PV~fGilTt~~~eqA~~raG~~ag~sm~nkG~eaa~~a~e~~~~ 147 (148)
T TIGR00114 81 PHFEYVADEAAKGIADLALDYDVPVIFGILTTETIEQAIERAGDKAGVSMENKGVEAAVKALEMAKL 147 (148)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
T ss_conf 6557777789999999998659877603328867999999601120121356679999999999850