HHsearch alignment for GI: 254780346 and conserved domain: cd06310
>cd06310 PBP1_ABC_sugar_binding_like_2 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=92.35 E-value=1.1 Score=25.43 Aligned_cols=35 Identities=6% Similarity=0.032 Sum_probs=19.8
Q ss_pred EEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 17999803128999999999999999879955555
Q gi|254780346|r 7 HVLIIEARFYENLSAMLFEGCVNVLHSRAVQWSSI 41 (149)
Q Consensus 7 kI~IV~s~~~~~i~~~ll~ga~~~l~~~~~~~~~i 41 (149)
T Consensus 1 kIg~i~~~~~npf~~~v~~G~e~aA~~~G~~v~~~ 35 (273)
T cd06310 1 KIALVPKGTTSDFWQAVKAGAEAAAKELGVKVTFQ 35 (273)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 98999599998599999999999999809989997