HHsearch alignment of GI: 254780346 and MMDB domain: 1c2y_A_
>1c2y_A (A:) Protein (lumazine synthase); riboflavin biosynthesis; HET: LMZ; 3.30A {Spinacia oleracea}
Probab=100.00 E-value=0 Score=325.16 Aligned_cols=144 Identities=24% Similarity=0.413 Sum_probs=136.6
Q ss_pred CCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCC--EEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCC
Q ss_conf 665871799980312899999999999999987995--555530014422699999986331137853566541200066
Q gi|254780346|r 2 EVFIPHVLIIEARFYENLSAMLFEGCVNVLHSRAVQ--WSSIVTPGVLEIPAAVSMVMNAKTRSVTYDGIIVLGVVMRGK 79 (149)
Q Consensus 2 ~~~~~kI~IV~s~~~~~i~~~ll~ga~~~l~~~~~~--~~~i~VPGa~EiP~a~~~~~~~~~~~~~~D~vIaLG~VIkGe 79 (149)
+....||+||.|+||++|++.|++||.+.|+++|++ +++++|||+||+|++++++++ +++|||+||||||||||
T Consensus 10 ~~~~~ri~IV~s~fn~~i~~~L~~ga~~~l~~~g~~~~i~v~~VPGa~EiP~a~~~l~~----~~~~daiiaLG~VIrGe 85 (156)
T 1c2y_A 10 KAQSFRFAIVVARFNEFVTRRLMEGALDTFKKYSVNEDIDVVWVPGAYELGVTAQALGK----SGKYHAIVCLGAVVKGD 85 (156)
T ss_dssp SCTTCCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCSCCEEEEESSHHHHHHHHHHHHH----TTCCSEEEEEEECCCCS
T ss_pred CCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHH----CCCCCEEEEEEEEECCC
T ss_conf 78998899998208799999999999999998499977289995537888999999985----37988499998997277
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 5246789999999999999743997056542558899999950656574569999999999999986369
Q gi|254780346|r 80 TAHCDVIAHAVTRGLVDLSINGSLPIGNGIVVVDSEQQAFDRVSPSHLDRGGCAARSALAMIELKKSLSE 149 (149)
Q Consensus 80 T~H~e~I~~~v~~gl~~lsl~~~~PI~~gILt~~n~~QA~~R~~~~~~nkG~eaa~Aal~mi~l~~~l~~ 149 (149)
|+||||||+++++|||++++++++||+|||||++|++||++|++++.+|||.|||++|++|++++|+|.+
T Consensus 86 T~H~~~v~~~vs~gl~~v~l~~~~PV~~Gvlt~~~~eQa~~R~~~~~~nkG~eaA~aal~m~~l~~~l~~ 155 (156)
T 1c2y_A 86 TSHYDAVVNSASSGVLSAGLNSGVPCVFGVLTCDNMDQAINRAGGKAGNKGAESALTAIEMASLFEHHLK 155 (156)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCSSHHHHHHHEEETTEEHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 6145689999999999975306986796004789889999885664345799999999999999998744