HHsearch alignment of GI: 254780346 and MMDB domain: 1dbq_A_1-109_242-289
>1dbq_A (A:1-109,A:242-289) Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli}
Probab=95.23 E-value=0.18 Score=29.84 Aligned_cols=120 Identities=14% Similarity=-0.012 Sum_probs=74.9
Q ss_pred CCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH-HHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCH
Q ss_conf 5871799980312899999999999999987995555530014422-699999986331137853566541200066524
Q gi|254780346|r 4 FIPHVLIIEARFYENLSAMLFEGCVNVLHSRAVQWSSIVTPGVLEI-PAAVSMVMNAKTRSVTYDGIIVLGVVMRGKTAH 82 (149)
Q Consensus 4 ~~~kI~IV~s~~~~~i~~~ll~ga~~~l~~~~~~~~~i~VPGa~Ei-P~a~~~~~~~~~~~~~~D~vIaLG~VIkGeT~H 82 (149)
...+|+++...+....-..+++|..+.+.+.|+........+..|- ...++.+. ..++||+|.+++-...+
T Consensus 6 ~s~~Igviip~~~~~f~~~~~~gi~~~a~~~g~~v~i~~~~~~~~~~~~~i~~l~-----~~~vDGiIi~~~~~~~~--- 77 (157)
T 1dbq_A 6 HTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMA-----QKRVDGLLVMCSEYPEP--- 77 (157)
T ss_dssp --CEEEEEESCTTSHHHHHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHH-----HTTCSEEEEECSCCCHH---
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHH-----HCCCCEEEECCCCCCHH---
T ss_conf 9997999959998989999999999999986999999968999899999999988-----45876688426556505---
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 678999999999999974399705654255889999995065657456999999999999
Q gi|254780346|r 83 CDVIAHAVTRGLVDLSINGSLPIGNGIVVVDSEQQAFDRVSPSHLDRGGCAARSALAMIE 142 (149)
Q Consensus 83 ~e~I~~~v~~gl~~lsl~~~~PI~~gILt~~n~~QA~~R~~~~~~nkG~eaa~Aal~mi~ 142 (149)
.+.+..-+.++|+..-=-..++.....--+ .+...-|+.|++.++++++
T Consensus 78 ----------~~~~~l~~~~iPvV~id~~~~~~~~~~V~~-Dn~~~~~~~a~~~l~~~i~ 126 (157)
T 1dbq_A 78 ----------LLAMLEEYRHIPMVVMDWGEAKADFTDAVI-DNKDSLGETAFNMLLDRIV 126 (157)
T ss_dssp ----------HHHHHHHTTTSCEEEEECSSCCSSSCEEEE-ECSHHHHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHCCCCEEEEEECCCCCCCCEEEE-ECHHHHHHHHHHHHHHHHC
T ss_conf ----------789998606996899850368899884997-0799999999999999970