HHsearch alignment of GI: 254780346 and MMDB domain: 2dri_A_1-104_237-271
>2dri_A (A:1-104,A:237-271) D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli}
Probab=94.91 E-value=0.32 Score=28.26 Aligned_cols=109 Identities=8% Similarity=0.054 Sum_probs=69.7
Q ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHH-HHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHH
Q ss_conf 8717999803128999999999999999879955555300144226-999999863311378535665412000665246
Q gi|254780346|r 5 IPHVLIIEARFYENLSAMLFEGCVNVLHSRAVQWSSIVTPGVLEIP-AAVSMVMNAKTRSVTYDGIIVLGVVMRGKTAHC 83 (149)
Q Consensus 5 ~~kI~IV~s~~~~~i~~~ll~ga~~~l~~~~~~~~~i~VPGa~EiP-~a~~~~~~~~~~~~~~D~vIaLG~VIkGeT~H~ 83 (149)
+.+|+++..+........+++|+.+.++++|++.........-+-= -.++.+ ...++||+|..++--...+++.
T Consensus 1 K~tIgvi~~~~~~~f~~~i~~gi~~~a~~~G~~l~i~~~~~~~~~~~~~i~~l-----i~~~vdgiIi~~~~~~~~~~~l 75 (139)
T 2dri_A 1 KDTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLVVLDSQNNPAKELANVQDL-----TVRGTKILLINPTDSDAVGNAV 75 (139)
T ss_dssp CCEEEEEESCSSSHHHHHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHH-----TTTTEEEEEECCSSTTTTHHHH
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHH-----HHCCCCCCCCCCCCCCCCHHHH
T ss_conf 98899992889898999999999999998599899995899999999999999-----8618764432122222316899
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEEE-----------EECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 7899999999999997439970565-----------4255889999995065657456999999999999
Q gi|254780346|r 84 DVIAHAVTRGLVDLSINGSLPIGNG-----------IVVVDSEQQAFDRVSPSHLDRGGCAARSALAMIE 142 (149)
Q Consensus 84 e~I~~~v~~gl~~lsl~~~~PI~~g-----------ILt~~n~~QA~~R~~~~~~nkG~eaa~Aal~mi~ 142 (149)
+...+.++|+++- +.+.+..+ -|..|.++|.+|++
T Consensus 76 ------------~~l~~~gIPvV~id~~~~~~~~~~~v~~d~~~------------~~~~~~~~~~~~~~ 121 (139)
T 2dri_A 76 ------------KMANQANIPVITLDRQATKGEVVSHIASDPDQ------------IGAKGVETADKVLK 121 (139)
T ss_dssp ------------HHHHHTTCCEEEESSCCSSSCCSEEEEECHHH------------HHHHHHHHHHHHHT
T ss_pred ------------HHHHHCCCCCCCCCCCCCCCCCCEEEEECHHH------------HHHHHHHHHHHHHC
T ss_conf ------------99986377532356555545542378522999------------99999999999977