HHsearch alignment of GI: 254780346 and MMDB domain: 3c3k_A_1-107_239-285
>3c3k_A (A:1-107,A:239-285) Alanine racemase; structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.99A {Actinobacillus succinogenes 130Z}
Probab=90.93 E-value=1.3 Score=24.49 Aligned_cols=85 Identities=13% Similarity=0.109 Sum_probs=59.2
Q ss_pred CCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHH
Q ss_conf 58717999803128999999999999999879955555300144226999999863311378535665412000665246
Q gi|254780346|r 4 FIPHVLIIEARFYENLSAMLFEGCVNVLHSRAVQWSSIVTPGVLEIPAAVSMVMNAKTRSVTYDGIIVLGVVMRGKTAHC 83 (149)
Q Consensus 4 ~~~kI~IV~s~~~~~i~~~ll~ga~~~l~~~~~~~~~i~VPGa~EiP~a~~~~~~~~~~~~~~D~vIaLG~VIkGeT~H~ 83 (149)
.+..|+++..++-...-..+++|..+.+.+.|+........+-.+.-..+-.. ..+..+||+|..|.-. -
T Consensus 7 ks~~IgvIipdl~npf~~~ii~gi~~~a~~~Gy~lvI~~~~~d~~~~~~~i~~----l~~~~vDGIII~~~~~------~ 76 (154)
T 3c3k_A 7 KTGMLLVMVSNIANPFCAAVVKGIEKTAEKNGYRILLCNTESDLARSRSCLTL----LSGKMVDGVITMDALS------E 76 (154)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHTHH----HHTTCCSEEEECCCGG------G
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHH----HHCCCCCCCCCCCCCC------C
T ss_conf 99989999698878899999999999999859989999789998999998766----5404554233212343------2
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 789999999999999743997056
Q gi|254780346|r 84 DVIAHAVTRGLVDLSINGSLPIGN 107 (149)
Q Consensus 84 e~I~~~v~~gl~~lsl~~~~PI~~ 107 (149)
+.+-. .++.++|+.+
T Consensus 77 ~~~~~---------~l~~~IPvVl 91 (154)
T 3c3k_A 77 LPELQ---------NIIGAFPWVQ 91 (154)
T ss_dssp HHHHH---------HHHTTSSEEE
T ss_pred HHHHH---------HHCCCCCEEE
T ss_conf 89998---------5036887899