HHsearch alignment of GI: 254780346 and MMDB domain: 3d8u_A_103-223
>3d8u_A (A:103-223) PURR transcriptional regulator; APC91343.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=91.20 E-value=1.2 Score=24.65 Aligned_cols=103 Identities=11% Similarity=0.031 Sum_probs=72.5
Q ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEH-HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHH
Q ss_conf 871799980312899999999999999987995555530-0144226999999863311378535665412000665246
Q gi|254780346|r 5 IPHVLIIEARFYENLSAMLFEGCVNVLHSRAVQWSSIVT-PGVLEIPAAVSMVMNAKTRSVTYDGIIVLGVVMRGKTAHC 83 (149)
Q Consensus 5 ~~kI~IV~s~~~~~i~~~ll~ga~~~l~~~~~~~~~i~V-PGa~EiP~a~~~~~~~~~~~~~~D~vIaLG~VIkGeT~H~ 83 (149)
-.||++|...-..........|+.+.+.+.+.......+ .+.++..........-......+||+++. .
T Consensus 18 ~~~i~~i~~~~~~~~~~~r~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~----------~ 87 (121)
T 3d8u_A 18 FKNVGFIGARGNHSTLQRQLHGWQSAXIENYLTPDHFLTTHEAPSSQLGAEGLAKLLLRDSSLNALVCS----------H 87 (121)
T ss_dssp CCCEEEEECSCSSHHHHHHHHHHHHHHHHTTCCCCCEEECSSCCCHHHHHHHHHHHHTTCTTCCEEEES----------S
T ss_pred CCEEEECCCCCCCCHHHHCCHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE----------H
T ss_conf 623641135765301221000135555422776640001235752226889999876523786078750----------2
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH
Q ss_conf 789999999999999743997056542558899999
Q gi|254780346|r 84 DVIAHAVTRGLVDLSINGSLPIGNGIVVVDSEQQAF 119 (149)
Q Consensus 84 e~I~~~v~~gl~~lsl~~~~PI~~gILt~~n~~QA~ 119 (149)
+.++..+.+.+.+.. ..+|==.+|++.+|.+-|+
T Consensus 88 d~~a~~~l~~l~~~g--~~vP~di~iig~d~~~~a~ 121 (121)
T 3d8u_A 88 EEIAIGALFECHRRV--LKVPTDIAIICLEGSSXGE 121 (121)
T ss_dssp HHHHHHHHHHHHHTT--CCTTTTCEEEESSCCHHHH
T ss_pred HHHHHHHHHHHHHCC--CCCCCCEEEEECCCHHHHH
T ss_conf 777766666554213--3223321013216827897