HHsearch alignment of GI: 254780346 and MMDB domain: 3ksm_A_107-242
>3ksm_A (A:107-242) ABC-type sugar transport system, periplasmic component; PSI- II, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis kctc 2396}
Probab=91.97 E-value=1 Score=25.15 Aligned_cols=103 Identities=14% Similarity=0.069 Sum_probs=77.7
Q ss_pred CEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHH
Q ss_conf 71799980312899999999999999987995555530014422699999986331137853566541200066524678
Q gi|254780346|r 6 PHVLIIEARFYENLSAMLFEGCVNVLHSRAVQWSSIVTPGVLEIPAAVSMVMNAKTRSVTYDGIIVLGVVMRGKTAHCDV 85 (149)
Q Consensus 6 ~kI~IV~s~~~~~i~~~ll~ga~~~l~~~~~~~~~i~VPGa~EiP~a~~~~~~~~~~~~~~D~vIaLG~VIkGeT~H~e~ 85 (149)
.||++|...=....+..-..|+.+.+.+++.........+.+....+.+.+........+.|++++.
T Consensus 22 ~~i~~i~~~~~~~~~~~R~~gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~------------- 88 (136)
T 3ksm_A 22 RNIALLRLRAGNASTDQREQGFLDVLRKHDKIRIIAAPYAGDDRGAARSEXLRLLKETPTIDGLFTP------------- 88 (136)
T ss_dssp EEEEECBCCTTCHHHHHHHHHHHHHHTTCTTEEEEECCBCCSSHHHHHHHHHHHHHHCSCCCEEECC-------------
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEC-------------
T ss_conf 4799953767764077898779999986798642021101022588999988764148876356625-------------
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 9999999999999743997056542558899999950
Q gi|254780346|r 86 IAHAVTRGLVDLSINGSLPIGNGIVVVDSEQQAFDRV 122 (149)
Q Consensus 86 I~~~v~~gl~~lsl~~~~PI~~gILt~~n~~QA~~R~ 122 (149)
.+..+.|+++.--+.++|=-..|.+.++...+.+-.
T Consensus 89 -~d~~a~g~~~al~~~g~p~di~v~g~d~~~~~~~~~ 124 (136)
T 3ksm_A 89 -NESTTIGALVAIRQSGXSKQFGFIGFDQTEELEAAX 124 (136)
T ss_dssp -SHHHHHHHHHHHHHTTCTTSSEEEEESCCHHHHHHH
T ss_pred -CHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHH
T ss_conf -719999999999975999992899878989999999