HHsearch results for GI: 254780346 and protein with PDBid: 3gv0_A

>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics, protein structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=93.09  E-value=0.37  Score=26.86  Aligned_cols=122  Identities=16%  Similarity=0.030  Sum_probs=62.7

Q ss_pred             CEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEE---EHHHHHHHH-HHHHHHHHHHHCCCCCCEEEEEEEEECCCCC
Q ss_conf             717999803128999999999999999879955555---300144226-9999998633113785356654120006652
Q gi|254780346|r    6 PHVLIIEARFYENLSAMLFEGCVNVLHSRAVQWSSI---VTPGVLEIP-AAVSMVMNAKTRSVTYDGIIVLGVVMRGKTA   81 (149)
Q Consensus         6 ~kI~IV~s~~~~~i~~~ll~ga~~~l~~~~~~~~~i---~VPGa~EiP-~a~~~~~~~~~~~~~~D~vIaLG~VIkGeT~   81 (149)
                      .||+++...=.....+.-++|+.+.++++|.+....   ..+...|-- -.++.++   ....++|++++.         
T Consensus       128 ~~I~~i~~~~~~~~~~~R~~Gf~~a~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~ai~~~---------  195 (288)
T 3gv0_A          128 KRIAVIVPPSRFSFHDHARKGFNRGIRDFGLTEFPIDAVTIETPLEKIRDFGQRLM---QSSDRPDGIVSI---------  195 (288)
T ss_dssp             CEEEEECCCTTSHHHHHHHHHHHHHHHHTTCEECCCCSCCTTSCHHHHHHHHHHHT---TSSSCCSEEEES---------
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHH---HHCCCCCCCCCC---------
T ss_conf             60899648754323878889999999983998562331133100236789999986---422577523446---------


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH------CCCCCCCHHHHHHHHHHHHH
Q ss_conf             46789999999999999743997056542558899999950------65657456999999999999
Q gi|254780346|r   82 HCDVIAHAVTRGLVDLSINGSLPIGNGIVVVDSEQQAFDRV------SPSHLDRGGCAARSALAMIE  142 (149)
Q Consensus        82 H~e~I~~~v~~gl~~lsl~~~~PI~~gILt~~n~~QA~~R~------~~~~~nkG~eaa~Aal~mi~  142 (149)
                       .|.++..+.+++.+..  ..+|=-..|++.++...+.--.      .....-.|+.|++.++++++
T Consensus       196 -~d~~a~~~~~~l~~~g--~~vP~dv~iigfd~~~~~~~~~p~ltti~~~~~~~g~~a~~~l~~~i~  259 (288)
T 3gv0_A          196 -SGSSTIALVAGFEAAG--VKIGEDVDIVSKQSAEFLNWIKPQIHTVNEDIKLAGRELAKALLARIN  259 (288)
T ss_dssp             -CHHHHHHHHHHHHTTT--CCTTTSCEEEEEESSTTHHHHCTTSEEEECCHHHHHHHHHHHHHHHHT
T ss_pred             -CHHHHHHHHHHHHHCC--CCCCCCEEEEEECCCHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHC
T ss_conf             -6699999999999849--988985189997782899826998469997999999999999999976