HHsearch alignment for GI: 254780347 and conserved domain: PRK13020
>PRK13020 riboflavin synthase subunit alpha; Provisional.
Probab=100.00 E-value=0 Score=505.18 Aligned_cols=197 Identities=34% Similarity=0.559 Sum_probs=190.4
Q ss_pred CCCEEEEEEEEEEEEEECCCCEEEEEEECCC-CCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf 9453371189999998769935999981755-112667724653331542365045556686799998656553201355
Q gi|254780347|r 1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYN-TSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS 79 (204)
Q Consensus 1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~~~~-~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~ 79 (204)
T Consensus 1 MFTGIIe~~G~I~~i~~~~~~~~l~I~~~~~~~~~l~iGdSIavnGvCLTV~~~~-----~~~~~fdv~~ETl~~T~l~~ 75 (207)
T PRK13020 1 MFTGIVQAVAEVVAIHKKDGLNTLEIAFPPDLLEGLEIGASVAVNGVCLTVTKIE-----GDRVFFDVMEETLRLTNLAN 75 (207)
T ss_pred CCCEECCEEEEEEEEEECCCCEEEEEECCCHHHCCCCCCCEEEECCEEEEEEECC-----CCEEEEEEEHHHHHHCCHHH
T ss_conf 9885516389999999769968999986822413577898799888898889748-----98599998789631252313
Q ss_pred CCCCCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCE
Q ss_conf 56566313354320000047642454010011011100233137987513421121002357199823457877416854
Q gi|254780347|r 80 WGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNF 159 (204)
Q Consensus 80 l~~G~~VNLE~a~~~g~~lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~~~~~~~~~l~~KgsI~idGvSLTV~~~~~~~ 159 (204)
T Consensus 76 ~~~G~~VNLEral~~gdrlgGH~V~GHVD~~~~i~~i~~~~~~~~~~i~~p~~~~~~iv~KGSIaidGVSLTV~~v~~~~ 155 (207)
T PRK13020 76 LRVGDRVNIERSAKFGAEIGGHILSGHVDTTAEVVEISETEENYDIRFRVPPEWMKYIFAKGFIGVNGCSLTVGDVEEGW 155 (207)
T ss_pred CCCCCEEEECCCCCCCCEECCCEEEEECCEEEEEEEEEECCCCEEEEEECCHHHHCCCCCCCEEEEEEEEEEEEEECCCE
T ss_conf 23598760044756876517816789800599999999848938999955979953667687799924899998773998
Q ss_pred EEEEEEHHHHCCCCHHHCCCCCEEEEEHH----HHHHHHHHHHCCCC
Q ss_conf 99998444330133002489967469713----58899999860233
Q gi|254780347|r 160 FDVLLIRHTIEETTWKMHKVGDLINIEVD----SMMRYIARLYALNT 202 (204)
Q Consensus 160 f~v~lIp~Tl~~T~l~~~k~Gd~VNiE~D----~l~kyv~r~~~~~~ 202 (204)
T Consensus 156 f~V~lIPhTl~~T~l~~~k~Gd~VNiE~D~~~~~i~k~ver~l~~~~ 202 (207)
T PRK13020 156 FEVHLIPETLRATNLGAKKVGDKVNIEIDSQTQVIVDTVERVLAARL 202 (207)
T ss_pred EEEEEEEHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 99999511354384434868998998385883489999999987543