HHsearch results for GI: 254780347 and protein with PDBid: 1i8d_A
>1i8d_A Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli} SCOP: b.43.4.3 b.43.4.3 PDB: 1hze_A* 1i18_A* 1pkv_A*
Probab=100.00 E-value=0 Score=495.09 Aligned_cols=197 Identities=33% Similarity=0.483 Sum_probs=185.2
Q ss_pred CCCEEEEEEEEEEEEEECCCCEEEEEEECC-CCCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf 945337118999999876993599998175-5112667724653331542365045556686799998656553201355
Q gi|254780347|r 1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSY-NTSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS 79 (204)
Q Consensus 1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~~~-~~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~ 79 (204)
|||||||++|+|.++++.+++.++.+.++. .++++++|||||||||||||++++. ++|+|+++|||+++|||+.
T Consensus 1 MFTGIIe~~G~v~~i~~~~~~~~~~i~~~~~~~~~l~iG~SIavnGvCLTV~~~~~-----~~~~fdv~~ETl~~T~l~~ 75 (213)
T 1i8d_A 1 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEING-----NHVSFDLMKETLRITNLGD 75 (213)
T ss_dssp CBCSCCCEEEEEEEEEECSSEEEEEEECCGGGTTTCCTTCEEEETTEEEEEEEEET-----TEEEEEEEHHHHHHSGGGG
T ss_pred CCCEECCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEECCEEEEEEEECC-----CCEEEEEEHHHHHCCCCCC
T ss_conf 94962272999999998799569999917410044778987997789978899818-----9289998045220051110
Q ss_pred CCCCCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECC-CCCCCEECCCCEEEEEEEEEEEEEECCC
Q ss_conf 565663133543200000476424540100110111002331379875134-2112100235719982345787741685
Q gi|254780347|r 80 WGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLP-HNLEQFIAVKGSVCLNGVSLTVNLVGKN 158 (204)
Q Consensus 80 l~~G~~VNLE~a~~~g~~lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~~~-~~~~~~l~~KgsI~idGvSLTV~~~~~~ 158 (204)
|++|++|||||||++|||+|||+|||||||+|+|.++++.++++.+++..| +.+++|+++|||||+|||||||+++.++
T Consensus 76 l~~G~~VNLEral~~gd~lgGH~V~GHVD~~~~i~~i~~~~~~~~~~~~~~~~~l~~yiv~KGSIaidGvSLTV~~v~~~ 155 (213)
T 1i8d_A 76 LKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPT 155 (213)
T ss_dssp CCTTCEEEEEECCBTTSCCSSCCBCCCCCEEEEEEEEEEETTEEEEEEEESCGGGGGGCCTTCEEEETTEEEECCSBCSS
T ss_pred CCCCCEEEECCCEECCCCCCCCCEEEEECCCCEEEEEEECCCCEEEEEEECCHHHHHHHHHCCEEEEEEEEEEEEEECCC
T ss_conf 34698686366610886318963798867411388999839967999982435776545413408984179998747398
Q ss_pred EEEEEEEHHHHCCCCHHHCCCCCEEEEEHHHHHHHH----HHHHCCCC
Q ss_conf 499998444330133002489967469713588999----99860233
Q gi|254780347|r 159 FFDVLLIRHTIEETTWKMHKVGDLINIEVDSMMRYI----ARLYALNT 202 (204)
Q Consensus 159 ~f~v~lIp~Tl~~T~l~~~k~Gd~VNiE~D~l~kyv----~r~~~~~~ 202 (204)
+|+|+||||||++|||+.+++||+||||+|+|+||+ +|+++.+.
T Consensus 156 ~f~v~lIP~Tl~~T~l~~~~~Gd~VNiE~D~~~kyi~~~~er~l~~~~ 203 (213)
T 1i8d_A 156 RFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARE 203 (213)
T ss_dssp EEEEEECHHHHHHSSGGGCCTTCEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCC
T ss_conf 899999846755463235878998998180457899999999864241