HHsearch results for GI: 254780347 and protein with PDBid: 1i8d_A

>1i8d_A Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli} SCOP: b.43.4.3 b.43.4.3 PDB: 1hze_A* 1i18_A* 1pkv_A*
Probab=100.00  E-value=0  Score=495.09  Aligned_cols=197  Identities=33%  Similarity=0.483  Sum_probs=185.2

Q ss_pred             CCCEEEEEEEEEEEEEECCCCEEEEEEECC-CCCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf             945337118999999876993599998175-5112667724653331542365045556686799998656553201355
Q gi|254780347|r    1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSY-NTSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS   79 (204)
Q Consensus         1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~~~-~~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~   79 (204)
                      |||||||++|+|.++++.+++.++.+.++. .++++++|||||||||||||++++.     ++|+|+++|||+++|||+.
T Consensus         1 MFTGIIe~~G~v~~i~~~~~~~~~~i~~~~~~~~~l~iG~SIavnGvCLTV~~~~~-----~~~~fdv~~ETl~~T~l~~   75 (213)
T 1i8d_A            1 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEING-----NHVSFDLMKETLRITNLGD   75 (213)
T ss_dssp             CBCSCCCEEEEEEEEEECSSEEEEEEECCGGGTTTCCTTCEEEETTEEEEEEEEET-----TEEEEEEEHHHHHHSGGGG
T ss_pred             CCCEECCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEECCEEEEEEEECC-----CCEEEEEEHHHHHCCCCCC
T ss_conf             94962272999999998799569999917410044778987997789978899818-----9289998045220051110


Q ss_pred             CCCCCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECC-CCCCCEECCCCEEEEEEEEEEEEEECCC
Q ss_conf             565663133543200000476424540100110111002331379875134-2112100235719982345787741685
Q gi|254780347|r   80 WGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLP-HNLEQFIAVKGSVCLNGVSLTVNLVGKN  158 (204)
Q Consensus        80 l~~G~~VNLE~a~~~g~~lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~~~-~~~~~~l~~KgsI~idGvSLTV~~~~~~  158 (204)
                      |++|++|||||||++|||+|||+|||||||+|+|.++++.++++.+++..| +.+++|+++|||||+|||||||+++.++
T Consensus        76 l~~G~~VNLEral~~gd~lgGH~V~GHVD~~~~i~~i~~~~~~~~~~~~~~~~~l~~yiv~KGSIaidGvSLTV~~v~~~  155 (213)
T 1i8d_A           76 LKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPT  155 (213)
T ss_dssp             CCTTCEEEEEECCBTTSCCSSCCBCCCCCEEEEEEEEEEETTEEEEEEEESCGGGGGGCCTTCEEEETTEEEECCSBCSS
T ss_pred             CCCCCEEEECCCEECCCCCCCCCEEEEECCCCEEEEEEECCCCEEEEEEECCHHHHHHHHHCCEEEEEEEEEEEEEECCC
T ss_conf             34698686366610886318963798867411388999839967999982435776545413408984179998747398


Q ss_pred             EEEEEEEHHHHCCCCHHHCCCCCEEEEEHHHHHHHH----HHHHCCCC
Q ss_conf             499998444330133002489967469713588999----99860233
Q gi|254780347|r  159 FFDVLLIRHTIEETTWKMHKVGDLINIEVDSMMRYI----ARLYALNT  202 (204)
Q Consensus       159 ~f~v~lIp~Tl~~T~l~~~k~Gd~VNiE~D~l~kyv----~r~~~~~~  202 (204)
                      +|+|+||||||++|||+.+++||+||||+|+|+||+    +|+++.+.
T Consensus       156 ~f~v~lIP~Tl~~T~l~~~~~Gd~VNiE~D~~~kyi~~~~er~l~~~~  203 (213)
T 1i8d_A          156 RFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARE  203 (213)
T ss_dssp             EEEEEECHHHHHHSSGGGCCTTCEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCC
T ss_conf             899999846755463235878998998180457899999999864241