HHsearch results for GI: 254780347 and protein with PDBid: 3a35_A
>3a35_A Lumazine protein, LUMP; luminous bacteria, homologue of riboflavin synthase, luminescent protein; HET: RBF; 1.42A {Photobacterium kishitanii} PDB: 3a3b_B* 3a3g_A*
Probab=100.00 E-value=0 Score=467.28 Aligned_cols=187 Identities=20% Similarity=0.296 Sum_probs=179.5
Q ss_pred CCCEEEEEEEEEEEEEECCCCEEEEEEECCC-CCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf 9453371189999998769935999981755-112667724653331542365045556686799998656553201355
Q gi|254780347|r 1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYN-TSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS 79 (204)
Q Consensus 1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~~~~-~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~ 79 (204)
|||||||++|+|.++++.+++.++.|.+|.. ++++++|+|||||||||||++++. +.|.|++ +||+++|||+.
T Consensus 1 MFTGIIe~~G~I~~i~~~~~~~~l~i~~~~~~~~~l~iG~SIavnGvCLTV~~~~~-----~~~~fdv-~ETl~~T~l~~ 74 (190)
T 3a35_A 1 MFKGIVQGAGIIKKISKNDDTQRHGITFPKDILESVEKGTVMLVNGCSLTVVRISG-----DVVYFDI-DQAINTTTFRE 74 (190)
T ss_dssp CBCSCCCEEEEEEEEEECSSCEEEEEECCHHHHHTCCTTCEEEETTEEEEEEEEET-----TEEEEEE-STTTTTSSGGG
T ss_pred CCCEECCEEEEEEEEEECCCCEEEEEEECHHHHHCCCCCCEEEECCEEEEEEEECC-----CEEEEEH-HHHHHHHHCCC
T ss_conf 95952280999999998799389999947456531667987998979889999637-----5089997-99566523357
Q ss_pred CCCCCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCE
Q ss_conf 56566313354320000047642454010011011100233137987513421121002357199823457877416854
Q gi|254780347|r 80 WGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNF 159 (204)
Q Consensus 80 l~~G~~VNLE~a~~~g~~lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~~~~~~~~~l~~KgsI~idGvSLTV~~~~~~~ 159 (204)
|++|++|||||||++|||+|||+|||||||+|+|.++++.++++.++|++|+++++|+++|||||+|||||||+++.+++
T Consensus 75 l~~g~~VNLEral~~gdrlgGH~V~GHVD~~~~i~~i~~~~~~~~~~~~~p~~~~~yiv~KGSIaidGvSLTV~~v~~~~ 154 (190)
T 3a35_A 75 LEVGNKVNLEVRPEFGSLLGKGALTGNIKGVATVDNITEEEDRLKVYIKIPKDLIENILSEDHIGINGVSHSIEEISDDI 154 (190)
T ss_dssp CCTTCEEEEECCCSSCCCCCSSCBCSCCCEEEEEEEEEEETTEEEEEEECCTTSCSCCCTTSEEEETTEEEECCEEETTE
T ss_pred CCCCCEECCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEECCCEEEEEECCHHHHCCCCCCCEEEEEEEEEEEEEECCCE
T ss_conf 76695872333433772759974578836656999998615723799986968941455665899965899988871989
Q ss_pred EEEEEEHHHHCCCCHHHCCCCCEEEEEH-HHHHHH
Q ss_conf 9999844433013300248996746971-358899
Q gi|254780347|r 160 FDVLLIRHTIEETTWKMHKVGDLINIEV-DSMMRY 193 (204)
Q Consensus 160 f~v~lIp~Tl~~T~l~~~k~Gd~VNiE~-D~l~ky 193 (204)
|+++|||||+++|||+.+++||+||||+ ||++||
T Consensus 155 f~v~lip~T~~~T~l~~~k~Gd~VNiE~~~~~gk~ 189 (190)
T 3a35_A 155 IFINYPKNLSITTNLGTLEKGSDVNVETLNVSNEW 189 (190)
T ss_dssp EEEEEETTHHHHSGGGGCCTTCEEEEEECC-----
T ss_pred EEEEECHHHHHHCCCCCCCCCCEEEECCHHCCCCC
T ss_conf 99996807775013555888999997882217678