HHsearch alignment for GI: 254780348 and conserved domain: COG1985

Probab=100.00  E-value=0  Score=362.11  Aligned_cols=210  Identities=39%  Similarity=0.556  Sum_probs=188.7

Q ss_pred             CCCCHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCCCCCCC-CCCCCEEEEEC
Q ss_conf             34222011010278772021136532222101356667642014403663122013454235443444-43442157644
Q gi|254780348|r  147 EKRSHITLKIAVSQDNMIGMAGCGSVPITGFISKNQVHLLRAQSDAILVGIGTVLADDPELTCRLNGL-QEHSPMRIILD  225 (364)
Q Consensus       147 ~~rP~V~lK~A~SlDGkIa~~~g~s~wIT~~~sr~~vh~lRa~~DaIlvG~~Tv~~DnP~Lt~R~~~~-~~~~P~riVld  225 (364)
T Consensus         1 ~~rP~v~lk~a~SlDGkia~~~g~s~~it~~~ar~~vh~lRa~~daIlvG~~TV~~DnP~Ltvr~~~~~~~~~P~rVIlD   80 (218)
T COG1985           1 RGRPFVTLKLAMSLDGKIATASGSSKWITGEEARADVHELRAESDAILVGSGTVLADNPSLTVRLPEGGEERNPVRVILD   80 (218)
T ss_pred             CCCCEEEEEEEEECCCCCCCCCCCCEEEECHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCEECCCCCCCCCCEEEEEC
T ss_conf             99963999999713676126798753673988999999999875989977667980288522424888766798799987


Q ss_pred             CCCCCCHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCC--CCCHHHHHHHHHHCCCCEEEECCHHHHHHHHH
Q ss_conf             6689980221003444670798546554210110022322222333--22278899998607996999812389999999
Q gi|254780348|r  226 PHFKLSLDSKIIKTALLAPVIIVTENDDPVLALAFRKKNINIIYCD--CRDLKKLLTILVGRGVTSLLVEGGAAVAHSFI  303 (364)
Q Consensus       226 ~~l~i~~~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~v~vi~~~--~~dl~~iL~~L~~~gi~~iLVEGG~~l~~sfl  303 (364)
T Consensus        81 ~~~rlp~~~~v~~~~~~~p~~v~~~~~-~~~~~~~~~~g~~~i~~~~~~vdl~~~l~~L~~~~i~~vlvEGG~~L~~s~l  159 (218)
T COG1985          81 SRLRLPLDSRVFRTGEGAPTIVVTTEP-EEKLRELKEAGVEVILLPDGRVDLAALLEELAERGINSVLVEGGATLNGSFL  159 (218)
T ss_pred             CCCCCCCHHHHHCCCCCCCEEEEECCC-HHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHH
T ss_conf             898887133322068888489994684-3666778747977998486654899999999866672899843899999999


Q ss_pred             HCCCCCEEEEEEECEEECCCCCCCCCCCCCC-----CCCCEEEEEEEECCCEEEEEEECC
Q ss_conf             7889889999960743268875233345454-----446405446886793699995074
Q gi|254780348|r  304 NSRLVDSIILYRSQIVIGEGGIPSPLEEGYL-----EKNFMCVRRDYFGSDVCLEYIGKN  358 (364)
Q Consensus       304 ~~~LvDEl~ifiaP~ilG~~g~~s~~~~~~~-----~~~~~l~~~~~ig~Dv~~~y~~k~  358 (364)
T Consensus       160 ~~glVDel~l~iaP~i~G~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~g~d~~l~~~~~~  218 (218)
T COG1985         160 EAGLVDELLLYIAPKILGGS-ARTLVGGLGFLSLADAPKLELLRVEQVGDDVLLEYRVNG  218 (218)
T ss_pred             HCCCCCEEEEEECCHHCCCC-CCCCCCCCCCCCHHHCCCCEEEEEEEECCEEEEEEEECC
T ss_conf             77997189999833211788-865526766432110433215658997891899999789