HHsearch alignment for GI: 254780348 and conserved domain: PRK08298

Probab=93.06  E-value=0.81  Score=25.83  Aligned_cols=94  Identities=20%  Similarity=0.263  Sum_probs=57.6

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE-EECCEEEEEEECC----CCCCCHHHHHHHHHH---CCHHCCC------
Q ss_conf             7899999999999987088218889647999-8699899998438----876984899999973---0010698------
Q gi|254780348|r    5 SFDARFMSAALRFSRWHVGLTSTNPSVACLI-VKDGIVIGRGVTA----YGGCPHAEVQALEEA---GEEARGA------   70 (364)
Q Consensus         5 ~~d~~~m~~a~~~a~~~~g~t~pNP~Vg~vi-v~~g~ii~~g~~~----~~G~~HAE~~al~~~---~~~~~~a------   70 (364)
T Consensus         2 ~~~q~Lv~~A~~~~~~ry~~~~---~gaAAllt~dG~I~-tG~NvEnasy~~~lCAEr~Ai~~Avs~G~r~~~~I~V~~~   77 (128)
T PRK08298          2 NIEQALYDAAKELLEQRYPNGW---GGAAAMRTEDGTIL-TSVAPEVINASTELCMETGAICEAHKLQKRVTHSICVARE   77 (128)
T ss_pred             CHHHHHHHHHHHHHHHHCCCCC---CEEEEEEECCCCEE-EEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEC
T ss_conf             4789999999999997474667---53899994799799-9742155667745157789999999769946999999916


Q ss_pred             ---EEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf             ---899905732115752105556530134324663010121
Q gi|254780348|r   71 ---TAYVTLEPCSHYGRSPPCAQFIIECGIRRVVVCVDDPDV  109 (364)
Q Consensus        71 ---tlyvtLEPC~h~GktppC~~~ii~~gIk~Vvi~~~DPnp  109 (364)
T Consensus        78 ~~~~~~~vl~PC------G~CRQ~L~Efg-~d~~V~v~~~d~  112 (128)
T PRK08298         78 NEHSPLKVLSPC------GVCQERLFYWG-PDVMVAVTNADD  112 (128)
T ss_pred             CCCCCEEEECCC------HHHHHHHHHHC-CCCEEEEECCCC
T ss_conf             888872665897------79999999979-997899968999