HHsearch alignment for GI: 254780348 and conserved domain: cd01286
>cd01286 deoxycytidylate_deaminase Deoxycytidylate deaminase domain. Deoxycytidylate deaminase catalyzes the deamination of dCMP to dUMP, providing the nucleotide substrate for thymidylate synthase. The enzyme binds Zn++, which is required for catalytic activity. The activity of the enzyme is allosterically regulated by the ratio of dCTP to dTTP not only in eukaryotic cells but also in T-even phage-infected Escherichia coli, with dCTP acting as an activator and dTTP as an inhibitor.
Probab=99.86 E-value=1.6e-21 Score=165.51 Aligned_cols=93 Identities=40% Similarity=0.569 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECCC-CCCC------------------------HHHHHHHH
Q ss_conf 9999999999998708821888964799986998999984388-7698------------------------48999999
Q gi|254780348|r 7 DARFMSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRGVTAY-GGCP------------------------HAEVQALE 61 (364)
Q Consensus 7 d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~~g~ii~~g~~~~-~G~~------------------------HAE~~al~ 61 (364)
T Consensus 1 De~fM~lA~~~A~rS---~~~~~~VGaVIV~~~~iIs~GyNG~p~g~~~~~~~~~~~~~~~~~~~~~~~~~iHAE~nAi~ 77 (131)
T cd01286 1 DEYFMAIARLAALRS---TCPRRQVGAVIVKDKRIISTGYNGSPSGLPHCAEVGCERDDLPSGEDQKCCRTVHAEQNAIL 77 (131)
T ss_pred CHHHHHHHHHHHHHC---CCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 988999999999866---99999868999979938966448998888874000331124443323222221789999999
Q ss_pred HHC---CHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 730---01069889990573211575210555653013432466301012
Q gi|254780348|r 62 EAG---EEARGATAYVTLEPCSHYGRSPPCAQFIIECGIRRVVVCVDDPD 108 (364)
Q Consensus 62 ~~~---~~~~~atlyvtLEPC~h~GktppC~~~ii~~gIk~Vvi~~~DPn 108 (364)
T Consensus 78 ~a~~~~~~~~g~tlYvT~~PC~~------Ca~~Ii~aGI~rVvy~~~y~~ 121 (131)
T cd01286 78 QAARHGVSLEGATLYVTLFPCIE------CAKLIIQAGIKKVVYAEPYDD 121 (131)
T ss_pred HHHHCCCCCCCCEEECCCCCHHH------HHHHHHHCCCCEEEECCCCCC
T ss_conf 99982998888666607897799------999999829999998997699