HHsearch results for GI: 254780348 and protein with PDBid: 1ctt_A
>1ctt_A Cytidine deaminase; hydrolase; HET: DHZ; 2.20A {Escherichia coli} SCOP: c.97.1.1 c.97.1.1 PDB: 1aln_A* 1af2_A* 1ctu_A*
Probab=94.98 E-value=0.15 Score=29.23 Aligned_cols=80 Identities=29% Similarity=0.338 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCEEEEEE-ECCEEEEEEECCC------CCCCHHHHHHHHHH---CCHHCCCEEEEECCC
Q ss_conf 9999999999870882188896479998-6998999984388------76984899999973---001069889990573
Q gi|254780348|r 9 RFMSAALRFSRWHVGLTSTNPSVACLIV-KDGIVIGRGVTAY------GGCPHAEVQALEEA---GEEARGATAYVTLEP 78 (364)
Q Consensus 9 ~~m~~a~~~a~~~~g~t~pNP~Vg~viv-~~g~ii~~g~~~~------~G~~HAE~~al~~~---~~~~~~atlyvtLEP 78 (364)
..+...+.+|......-.-|=.|||++. ++|+|. .|.... .-+-|||..|+.+| |++. -.++.|+.-|
T Consensus 51 ~l~~~llp~A~~~A~aPyS~F~VGAa~~~~sG~iy-~G~NvE~~nas~~~ticAEq~Ai~~A~~~Ge~~-i~~i~v~~sP 128 (294)
T 1ctt_A 51 ALAFALLPLAAACARTPLSNFNVGAIARGVSGTWY-FGANMEFIGATMQQTVHAEQSAISHAWLSGEKA-LAAITVNYTP 128 (294)
T ss_dssp HHHHHHHHHHHHTCBCTTTCCCCEEEEEETTSCEE-EEECBCCTTSCGGGCBCHHHHHHHHHHHTTCCC-EEEEEESSCC
T ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEE-EEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCC-EEEEEEECCC
T ss_conf 99998899999625198789937899994899899-976034578888875458999999998748973-6999997898
Q ss_pred CCCCCCCCHHHHHHHHCC
Q ss_conf 211575210555653013
Q gi|254780348|r 79 CSHYGRSPPCAQFIIECG 96 (364)
Q Consensus 79 C~h~GktppC~~~ii~~g 96 (364)
|-| |-+.|.+..
T Consensus 129 CG~------CRQ~l~E~~ 140 (294)
T 1ctt_A 129 CGH------CRQFMNELN 140 (294)
T ss_dssp CHH------HHHHHTTBT
T ss_pred CHH------HHHHHHHHC
T ss_conf 388------899998614