HHsearch results for GI: 254780348 and protein with PDBid: 1vdr_A
>1vdr_A DHFR, dihydrofolate reductase; oxidoreductase, halophilic enzyme; 2.55A {Haloferax volcanii} SCOP: c.71.1.1 PDB: 2ith_A 2jyb_A
Probab=98.55 E-value=1e-06 Score=64.24 Aligned_cols=157 Identities=15% Similarity=0.138 Sum_probs=101.3
Q ss_pred HHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 01101027877202113653222210135666764201440366312201345423544344443442157644668998
Q gi|254780348|r 152 ITLKIAVSQDNMIGMAGCGSVPITGFISKNQVHLLRAQSDAILVGIGTVLADDPELTCRLNGLQEHSPMRIILDPHFKLS 231 (364)
Q Consensus 152 V~lK~A~SlDGkIa~~~g~s~wIT~~~sr~~vh~lRa~~DaIlvG~~Tv~~DnP~Lt~R~~~~~~~~P~riVld~~l~i~ 231 (364)
+++=+|++.||-|+ .+|+--|..-++..++...+ ....++++|.+|... |--.+ +++ ..+|++++..-
T Consensus 3 i~~I~A~~~~~~IG-~~~~lPW~~~~~Dl~~F~~~-T~~~~vIMGrkT~es----l~~pl---p~R--~~iVlsr~~~~- 70 (162)
T 1vdr_A 3 LVSVAALAENRVIG-RDGELPWPSIPADKKQYRSR-IADDPVVLGRTTFES----MRDDL---PGS--AQIVMSRSERS- 70 (162)
T ss_dssp EEEEEEEEETSEEE-BTTBCSSCCCHHHHHHHHHH-TSSSCEEEEHHHHHH----TTTSC---CSS--SEEEECSSCCC-
T ss_pred EEEEEEECCCCCCC-CCCCCCCCCCHHHHHHHHHH-CCCCEEEEECCCHHH----HHHCC---CCC--CEEEEEECCCC-
T ss_conf 99999998999576-79968773588899999985-589779998770254----31125---687--32999712121-
Q ss_pred HHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEE
Q ss_conf 02210034446707985465542101100223222223332227889999860799699981238999999978898899
Q gi|254780348|r 232 LDSKIIKTALLAPVIIVTENDDPVLALAFRKKNINIIYCDCRDLKKLLTILVGRGVTSLLVEGGAAVAHSFINSRLVDSI 311 (364)
Q Consensus 232 ~~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~v~vi~~~~~dl~~iL~~L~~~gi~~iLVEGG~~l~~sfl~~~LvDEl 311 (364)
....++.+ ..++.++++.+.+.+.+.|+|-||+++...|+. ++||+
T Consensus 71 ----------------------------~~~~~~~~----~~~~~~ai~~~~~~~~~~I~ViGG~~Iy~~~l~--~~dei 116 (162)
T 1vdr_A 71 ----------------------------FSVDTAHR----AASVEEAVDIAASLDAETAYVIGGAAIYALFQP--HLDRM 116 (162)
T ss_dssp ----------------------------CCSSSCCE----ESSHHHHHHHHHHTTCSCEEEEECHHHHHHHGG--GCSEE
T ss_pred ----------------------------CCCCCEEE----EEEHHHHHHHHHCCCCCEEEEECCHHHHHHHHH--HCCEE
T ss_conf ----------------------------02697699----612999999986289966999877899999987--43857
Q ss_pred EEEEECEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECC
Q ss_conf 99960743268875233345454446405446886793699995074
Q gi|254780348|r 312 ILYRSQIVIGEGGIPSPLEEGYLEKNFMCVRRDYFGSDVCLEYIGKN 358 (364)
Q Consensus 312 ~ifiaP~ilG~~g~~s~~~~~~~~~~~~l~~~~~ig~Dv~~~y~~k~ 358 (364)
++++-+....++. -.| . .....|++++.....+=.+.+|.|+.
T Consensus 117 ~iT~I~~~~~~D~-~fP--~-~d~~~~~~~~~~~~~~f~~~~y~Rk~ 159 (162)
T 1vdr_A 117 VLSRVPGEYEGDT-YYP--E-WDAAEWELDAETDHEGFTLQEWVRSA 159 (162)
T ss_dssp EEEEEEEECCCSE-ECC--C-CCTTTEEEEEEEECSSCEEEEEEEC-
T ss_pred EEEEECCCCCCCE-ECC--C-CCHHHCEEEEEEECCCEEEEEEEECC
T ss_conf 9999756646767-888--8-98689899999616997999999369