HHsearch results for GI: 254780348 and protein with PDBid: 2b3j_A

>2b3j_A TRNA adenosine deaminase; mixed alpha-beta, protein-RNA complex, RNA stem-loop, hydrolase/RNA complex; HET: P5P; 2.00A {Staphylococcus aureus subsp} SCOP: c.97.1.2
Probab=100.00  E-value=1.6e-34  Score=251.79  Aligned_cols=139  Identities=31%  Similarity=0.436  Sum_probs=125.8

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECC----CCCCCHHHHHHHHHHCC-----HHCCCEEEEE
Q ss_conf             78999999999999870882188896479998699899998438----87698489999997300-----1069889990
Q gi|254780348|r    5 SFDARFMSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRGVTA----YGGCPHAEVQALEEAGE-----EARGATAYVT   75 (364)
Q Consensus         5 ~~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~~g~ii~~g~~~----~~G~~HAE~~al~~~~~-----~~~~atlyvt   75 (364)
                      +.|++||++||++|+++.  +.|||+||||||++|++|+.|+++    ..+.+|||++|+.++..     ...++|+|+|
T Consensus         5 ~~D~~fM~~Al~~A~~a~--~~g~~pVGaViV~~~~ii~~g~~~~~~~~~~~~HAE~~ai~~a~~~~~~~~l~~~tly~t   82 (159)
T 2b3j_A            5 TNDIYFMTLAIEEAKKAA--QLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVLGSWRLEGCTLYVT   82 (159)
T ss_dssp             HHHHHHHHHHHHHHHHHH--HTTSCCCEEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTSSCCTTEEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHC--CCCCCCEEEEEEECCEEEEEEECCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
T ss_conf             679999999999999854--069998999998699389876231005886335899999999999838877788557403


Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCC----EEE-ECCCCHHHHHHHHHHHHCCCCCC
Q ss_conf             5732115752105556530134324663010121101243311001898----896-22210123200122220113422
Q gi|254780348|r   76 LEPCSHYGRSPPCAQFIIECGIRRVVVCVDDPDVRVSGRGLQWLSQKGI----IVD-RMMESEGKIFLHAYLTRQVEKRS  150 (364)
Q Consensus        76 LEPC~h~GktppC~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~~L~~~GI----~V~-~~~~~~~~~ln~~f~~~~~~~rP  150 (364)
                      ||||.      +|+.+|+++||+|||||+.|||+.++|+|..+|+++||    +|. |++++||.+|++.||++.+.++|
T Consensus        83 ~EPC~------mC~~ai~~agI~~Vv~g~~dp~~~~~g~~~~~l~~~~i~~~~~v~~Gvl~~e~~~Ll~~ff~~~R~~~~  156 (159)
T 2b3j_A           83 LEPCV------MCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRAIVDKGVLKEACSTLLTTFFKNLRANKK  156 (159)
T ss_dssp             ECCCH------HHHHHHHHTTCSEEEEEECCTTTCTBTTSCBTTSCTTSSCCCEEECCTTHHHHHHHHHHHHHHHHHC--
T ss_pred             CCCCH------HHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf             79968------999999996999899997489987556388998726999998798284999999999999999985048


Q ss_pred             H
Q ss_conf             2
Q gi|254780348|r  151 H  151 (364)
Q Consensus       151 ~  151 (364)
                      -
T Consensus       157 ~  157 (159)
T 2b3j_A          157 S  157 (159)
T ss_dssp             -
T ss_pred             C
T ss_conf             9