HHsearch results for GI: 254780348 and protein with PDBid: 2b3j_A
>2b3j_A TRNA adenosine deaminase; mixed alpha-beta, protein-RNA complex, RNA stem-loop, hydrolase/RNA complex; HET: P5P; 2.00A {Staphylococcus aureus subsp} SCOP: c.97.1.2
Probab=100.00 E-value=1.6e-34 Score=251.79 Aligned_cols=139 Identities=31% Similarity=0.436 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECC----CCCCCHHHHHHHHHHCC-----HHCCCEEEEE
Q ss_conf 78999999999999870882188896479998699899998438----87698489999997300-----1069889990
Q gi|254780348|r 5 SFDARFMSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRGVTA----YGGCPHAEVQALEEAGE-----EARGATAYVT 75 (364)
Q Consensus 5 ~~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~~g~ii~~g~~~----~~G~~HAE~~al~~~~~-----~~~~atlyvt 75 (364)
+.|++||++||++|+++. +.|||+||||||++|++|+.|+++ ..+.+|||++|+.++.. ...++|+|+|
T Consensus 5 ~~D~~fM~~Al~~A~~a~--~~g~~pVGaViV~~~~ii~~g~~~~~~~~~~~~HAE~~ai~~a~~~~~~~~l~~~tly~t 82 (159)
T 2b3j_A 5 TNDIYFMTLAIEEAKKAA--QLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVLGSWRLEGCTLYVT 82 (159)
T ss_dssp HHHHHHHHHHHHHHHHHH--HTTSCCCEEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTSSCCTTEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHC--CCCCCCEEEEEEECCEEEEEEECCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
T ss_conf 679999999999999854--069998999998699389876231005886335899999999999838877788557403
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCC----EEE-ECCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 5732115752105556530134324663010121101243311001898----896-22210123200122220113422
Q gi|254780348|r 76 LEPCSHYGRSPPCAQFIIECGIRRVVVCVDDPDVRVSGRGLQWLSQKGI----IVD-RMMESEGKIFLHAYLTRQVEKRS 150 (364)
Q Consensus 76 LEPC~h~GktppC~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~~L~~~GI----~V~-~~~~~~~~~ln~~f~~~~~~~rP 150 (364)
||||. +|+.+|+++||+|||||+.|||+.++|+|..+|+++|| +|. |++++||.+|++.||++.+.++|
T Consensus 83 ~EPC~------mC~~ai~~agI~~Vv~g~~dp~~~~~g~~~~~l~~~~i~~~~~v~~Gvl~~e~~~Ll~~ff~~~R~~~~ 156 (159)
T 2b3j_A 83 LEPCV------MCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRAIVDKGVLKEACSTLLTTFFKNLRANKK 156 (159)
T ss_dssp ECCCH------HHHHHHHHTTCSEEEEEECCTTTCTBTTSCBTTSCTTSSCCCEEECCTTHHHHHHHHHHHHHHHHHC--
T ss_pred CCCCH------HHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 79968------999999996999899997489987556388998726999998798284999999999999999985048
Q ss_pred H
Q ss_conf 2
Q gi|254780348|r 151 H 151 (364)
Q Consensus 151 ~ 151 (364)
-
T Consensus 157 ~ 157 (159)
T 2b3j_A 157 S 157 (159)
T ss_dssp -
T ss_pred C
T ss_conf 9