HHsearch results for GI: 254780348 and protein with PDBid: 3dmo_A
>3dmo_A Cytidine deaminase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.60A {Burkholderia pseudomallei}
Probab=96.42 E-value=0.014 Score=36.28 Aligned_cols=96 Identities=27% Similarity=0.349 Sum_probs=52.8
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE-ECCEEEEEEECCCC----CCCHHHHHHHHHH---CCHHCC-CEEEE
Q ss_conf 778999999999999870882188896479998-69989999843887----6984899999973---001069-88999
Q gi|254780348|r 4 SSFDARFMSAALRFSRWHVGLTSTNPSVACLIV-KDGIVIGRGVTAYG----GCPHAEVQALEEA---GEEARG-ATAYV 74 (364)
Q Consensus 4 ~~~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv-~~g~ii~~g~~~~~----G~~HAE~~al~~~---~~~~~~-atlyv 74 (364)
.-||.+=+-.+...|++....-.-|=.|||++. +||+|. .|.+... .+-|||..||-++ |.+... ..++|
T Consensus 7 ~~m~~~~L~~~A~~a~~~ayaPyS~f~VGAAl~~~~G~i~-~G~NvEnas~~~~~CAEr~Ai~~a~~~g~~~~~~~~iav 85 (138)
T 3dmo_A 7 HHMTHHALIEAAKAAREKAYAPYSNFKVGAALVTNDGKVF-HGCNVENASYGLCNCAERTALFSALAAGYRPGEFAAIAV 85 (138)
T ss_dssp TTCCHHHHHHHHHHHHTTCBCTTTCCCEEEEEEETTSCEE-EEECBCCSSGGGCBCHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEE-EEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf 5639999999999999838198568858999997899999-899670565666647888999999974887553699999
Q ss_pred -E-----CCCCCCCCCCCHHHHHHHHCCCCEEEEECCC
Q ss_conf -0-----5732115752105556530134324663010
Q gi|254780348|r 75 -T-----LEPCSHYGRSPPCAQFIIECGIRRVVVCVDD 106 (364)
Q Consensus 75 -t-----LEPC~h~GktppC~~~ii~~gIk~Vvi~~~D 106 (364)
+ +-|| +.|.+.|.+.+=..+.|-..+
T Consensus 86 ~~~~~~~~sPC------G~CRQ~l~E~~~~~~~i~l~~ 117 (138)
T 3dmo_A 86 VGETHGPIAPC------GACRQVMIELGKPTLEVVLTN 117 (138)
T ss_dssp EESCSSSCCCC------HHHHHHHHHHHCTTCEEEEEC
T ss_pred ECCCCCCCCCC------HHHHHHHHHHCCCCCEEEEEC
T ss_conf 84899867989------889999999679994899998