HHsearch results for GI: 254780348 and protein with PDBid: 3jtw_A

>3jtw_A Dihydrofolate reductase; YP_805003.1, structural genomics, joint center for structural genomics, JCSG; 1.90A {Pediococcus pentosaceus atcc 25745}
Probab=99.94  E-value=6e-27  Score=200.73  Aligned_cols=168  Identities=18%  Similarity=0.148  Sum_probs=133.6

Q ss_pred             HHHHHCCCHHHHCCCCCCCCCCCC----CHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf             011010278772021136532222----1013566676420144036631220134542354434444344215764466
Q gi|254780348|r  152 ITLKIAVSQDNMIGMAGCGSVPIT----GFISKNQVHLLRAQSDAILVGIGTVLADDPELTCRLNGLQEHSPMRIILDPH  227 (364)
Q Consensus       152 V~lK~A~SlDGkIa~~~g~s~wIT----~~~sr~~vh~lRa~~DaIlvG~~Tv~~DnP~Lt~R~~~~~~~~P~riVld~~  227 (364)
                      |++++|+|+|||||..+|++.|++    +++++.++|.+|+.+||||+|.+|+..|+|.|+.|..... .. ..+|++++
T Consensus         6 vi~~~a~SlDG~Ia~~~g~~~w~~~~~~~~~~~~~~~~~~~~~dail~Gr~T~~~~~~~~~~~~~~~~-~~-~~~v~~~~   83 (178)
T 3jtw_A            6 VILFIAMSIDNYIADDQGAVDWLEKNVHGTESDDSYEKMYSKIDTVIMGRTTYEQVTQKLSPEKYVYA-DR-QTYIVTSH   83 (178)
T ss_dssp             EEEEEEEETTCEEECTTSCCHHHHTTCCCCCCCCHHHHHHHHEEEEEEEHHHHHHHHHHTCSSSCTTT-TS-EEEEECSS
T ss_pred             EEEEEEEECCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHCCCCCCCCCCCCC-CC-CEEEEEEC
T ss_conf             98999991898678999995772478887799999999984399899894363301535894433458-98-47999632


Q ss_pred             CCCCHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCC
Q ss_conf             89980221003444670798546554210110022322222333222788999986079969998123899999997889
Q gi|254780348|r  228 FKLSLDSKIIKTALLAPVIIVTENDDPVLALAFRKKNINIIYCDCRDLKKLLTILVGRGVTSLLVEGGAAVAHSFINSRL  307 (364)
Q Consensus       228 l~i~~~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~v~vi~~~~~dl~~iL~~L~~~gi~~iLVEGG~~l~~sfl~~~L  307 (364)
                      ..-                        .      ..++.   .-..++.++++.|.+++.++++||||+.++++||+++|
T Consensus        84 ~~~------------------------~------~~~~~---~~~~~~~~~~~~l~~~~~~~i~v~GG~~l~~~fl~~~L  130 (178)
T 3jtw_A           84 LGE------------------------D------TDKIK---YWKQSPVELVKRIQKEKGKDVWIVGGAKIIDPLVQANL  130 (178)
T ss_dssp             CCC------------------------C------CSSEE---EECSCHHHHHHHHHTSSCCEEEEEECHHHHHHHHHTTC
T ss_pred             CCC------------------------C------CCCCE---ECCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCC
T ss_conf             443------------------------2------34530---02799999999999747995699864999999987798


Q ss_pred             CCEEEEEEECEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEE
Q ss_conf             8899999607432688752333454544464054468867936999950
Q gi|254780348|r  308 VDSIILYRSQIVIGEGGIPSPLEEGYLEKNFMCVRRDYFGSDVCLEYIG  356 (364)
Q Consensus       308 vDEl~ifiaP~ilG~~g~~s~~~~~~~~~~~~l~~~~~ig~Dv~~~y~~  356 (364)
                      |||+++|++|.++|+ |.+.+ .......+|++++++.++++++++|.|
T Consensus       131 vDel~l~~~P~ilG~-G~~lf-~~~~~~~~l~L~~~~~~~~~v~l~Y~R  177 (178)
T 3jtw_A          131 IDTYILTTVPIFLGS-GIRLF-DRLEEQVPVRLIDVYQKNELVYSIYQR  177 (178)
T ss_dssp             CSEEEEEEESCCCCS-SEESS-SCCCSCCCEEEEEEEEETTEEEEEEEE
T ss_pred             CCEEEEEEEEEEECC-CCCCC-CCCCCCCCCEEEEEEEECCEEEEEEEC
T ss_conf             777576991088668-86077-887667784897899969999999827