HHSEARCH alignment of GI: 254780348 and SCOP domain: d1uwza_

Alignment
>d1uwza_ c.97.1.1 (A:) mono-domain cytidine deaminase {Bacillus subtilis [TaxId: 1423]}
Probab=95.92  E-value=0.017  Score=34.12  Aligned_cols=90  Identities=28%  Similarity=0.385  Sum_probs=54.6

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCEEEEEE-ECCEEEEEEECCCC----CCCHHHHHHHHHHC---CHHCCCEEEEE-----
Q ss_conf             9999999999870882188896479998-69989999843887----69848999999730---01069889990-----
Q gi|254780348|r    9 RFMSAALRFSRWHVGLTSTNPSVACLIV-KDGIVIGRGVTAYG----GCPHAEVQALEEAG---EEARGATAYVT-----   75 (364)
Q Consensus         9 ~~m~~a~~~a~~~~g~t~pNP~Vg~viv-~~g~ii~~g~~~~~----G~~HAE~~al~~~~---~~~~~atlyvt-----   75 (364)
                      ..+..|++ |++....-+-|-.|||++. .+|+|+ .|.....    .+-+||..||-++-   +....+...++     
T Consensus         5 ~L~~~A~~-a~~~ayaPyS~f~VGAa~~~~~G~i~-~G~NvEnas~~~~~CAEr~Ai~~a~~~g~~~~~~i~v~~~~~~~   82 (130)
T d1uwza_           5 ELITEALK-ARDMAYAPYSKFQVGAALLTKDGKVY-RGCNIENAAYSMCNCAEATALFKAVSEGDTEFQMLAVAADTPGP   82 (130)
T ss_dssp             HHHHHHHH-HHTTCBCTTTCCCEEEEEEETTSCEE-EEECBCCSSGGGCBCHHHHHHHHHHHHTCCCEEEEEEEESCSSS
T ss_pred             HHHHHHHH-HHHHCCCCCCCCCEEEEEEECCCCEE-EEEEECCCCCCCCCCCEEHHHHHHHHHHHCCEEEEEEECCCCCC
T ss_conf             99999999-99718287569948899996899999-87600345666553200035678888642012268997289986


Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCCEEEEECCC
Q ss_conf             5732115752105556530134324663010
Q gi|254780348|r   76 LEPCSHYGRSPPCAQFIIECGIRRVVVCVDD  106 (364)
Q Consensus        76 LEPC~h~GktppC~~~ii~~gIk~Vvi~~~D  106 (364)
                      +-||-+      |-+.|.+.+-+.+.|-..+
T Consensus        83 ~sPCG~------CRQ~l~E~~~~~~~i~l~~  107 (130)
T d1uwza_          83 VSPCGA------CRQVISELCTKDVIVVLTN  107 (130)
T ss_dssp             CCCCHH------HHHHHHHHSCTTCEEEEEC
T ss_pred             CCCCHH------HHHHHHHHCCCCCEEEEEC
T ss_conf             676789------9999998478984899987


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Cytidine deaminase-like
superfamily: Cytidine deaminase-like
family: Cytidine deaminase
domain: mono-domain cytidine deaminase
species: Bacillus subtilis [TaxId: 1423]