HHSEARCH alignment of GI: 254780348 and SCOP domain: d2b3za1

Alignment
>d2b3za1 c.71.1.2 (A:146-359) Riboflavin biosynthesis protein RibD {Bacillus subtilis [TaxId: 1423]}
Probab=100.00  E-value=0  Score=355.15  Aligned_cols=206  Identities=30%  Similarity=0.412  Sum_probs=186.1

Q ss_pred             CHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf             22011010278772021136532222101356667642014403663122013454235443444434421576446689
Q gi|254780348|r  150 SHITLKIAVSQDNMIGMAGCGSVPITGFISKNQVHLLRAQSDAILVGIGTVLADDPELTCRLNGLQEHSPMRIILDPHFK  229 (364)
Q Consensus       150 P~V~lK~A~SlDGkIa~~~g~s~wIT~~~sr~~vh~lRa~~DaIlvG~~Tv~~DnP~Lt~R~~~~~~~~P~riVld~~l~  229 (364)
                      |||++|+|+|+|||||..+|+++||||++||+++|+||+++||||+|++|++.|||+||+|.++. .++|.+||+|++++
T Consensus         1 P~V~~k~A~SlDG~Ia~~~g~s~wit~~~sr~~~h~lR~~~dailvG~~Tv~~D~p~l~~R~~~~-~~~p~~vv~d~~l~   79 (214)
T d2b3za1           1 PYVTLKAAASLDGKIATSTGDSKWITSEAARQDAQQYRKTHQSILVGVGTVKADNPSLTCRLPNV-TKQPVRVILDTVLS   79 (214)
T ss_dssp             CEEEEEEEEETTSBSSCTTSCCTTSSCHHHHHHHTTHHHHSSEEEEEHHHHHHHCCCCCCCSTTC-CSCCEEEEECTTCC
T ss_pred             CEEEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHCCCCCCC-CCCCCCCCCCCCCC
T ss_conf             97999998879788788899667889989999999999861211233053101320000246543-23330211133455


Q ss_pred             CCHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCC--CCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCC
Q ss_conf             980221003444670798546554210110022322222333--222788999986079969998123899999997889
Q gi|254780348|r  230 LSLDSKIIKTALLAPVIIVTENDDPVLALAFRKKNINIIYCD--CRDLKKLLTILVGRGVTSLLVEGGAAVAHSFINSRL  307 (364)
Q Consensus       230 i~~~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~v~vi~~~--~~dl~~iL~~L~~~gi~~iLVEGG~~l~~sfl~~~L  307 (364)
                      +++++++|.......+++++...+..+...+...++.++...  ..|++++++.|+++||++||||||++++++||++||
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~L~~~gi~~ilvEGG~~l~~sfl~~~L  159 (214)
T d2b3za1          80 IPEDAKVICDQIAPTWIFTTARADEEKKKRLSAFGVNIFTLETERIQIPDVLKILAEEGIMSVYVEGGSAVHGSFVKEGC  159 (214)
T ss_dssp             CCTTCHHHHSCSSCEEEEECTTSCHHHHHHHHTTTCEEEECSSSSCCHHHHHHHHHHTTCCEEEEEECHHHHHHHHHHTC
T ss_pred             CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCC
T ss_conf             35211278740356411111112344555553036542112111212389999998779977999726788899985574


Q ss_pred             CCEEEEEEECEEECCCCCCCCCCCCCC-----CCCCEEEEEEEECCCEEEEEEE
Q ss_conf             889999960743268875233345454-----4464054468867936999950
Q gi|254780348|r  308 VDSIILYRSQIVIGEGGIPSPLEEGYL-----EKNFMCVRRDYFGSDVCLEYIG  356 (364)
Q Consensus       308 vDEl~ifiaP~ilG~~g~~s~~~~~~~-----~~~~~l~~~~~ig~Dv~~~y~~  356 (364)
                      |||+++|+||+++|+++.+++++....     ...|++++++++|+|++++|++
T Consensus       160 vDEl~l~iaP~ilG~~~~~~~~~~~~~~~l~~~~~l~l~~~~~~g~Di~l~~~p  213 (214)
T d2b3za1         160 FQEIIFYFAPKLIGGTHAPSLISGEGFQSMKDVPLLQFTDITQIGRDIKLTAKP  213 (214)
T ss_dssp             CSEEEEEEESBCCCCSSSCBSSCSSCCSSTTSSCBEEEEEEEEETTEEEEEEEE
T ss_pred             HHEEEEEECCEEECCCCCCCCCCCCCCCCHHHCCCCEEEEEEEECCEEEEEEEE
T ss_conf             213656887756558887654477571284446265864689989829999997


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Dihydrofolate reductase-like
superfamily: Dihydrofolate reductase-like
family: RibD C-terminal domain-like
domain: Riboflavin biosynthesis protein RibD
species: Bacillus subtilis [TaxId: 1423]