HHsearch alignment for GI: 254780349 and conserved domain: COG1167
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].
Probab=99.37 E-value=2e-09 Score=86.20 Aligned_cols=300 Identities=18% Similarity=0.219 Sum_probs=177.9
Q ss_pred HHHHHHHHHHHHH-HHHCCCCCEECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 7999999999999-987188630100001679-99999998315487488123344841114766543333322013665
Q gi|254780349|r 76 YVDDIENIAIERA-KKLFNVNFVNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNV 153 (433)
Q Consensus 76 ~~d~iE~la~~~a-~~lF~a~~anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~ 153 (433)
T Consensus 134 ~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~-----~~~~~~g~~~~~vp~ 208 (459)
T COG1167 134 LPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGAL-----QALEALGARVIPVPV 208 (459)
T ss_pred CHHHHHHHHHHHHHHCCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHH-----HHHHHCCCCEEEECC
T ss_conf 899999999999997499888303898064999999999984799999998999828999-----999986994786067
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCC----CC---HHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC
Q ss_conf 8323565989999999860466789705524353----63---7999988641797899186201244320001232200
Q gi|254780349|r 154 RKEDGLLDMHEIESLAIEYNPKLIIVGGTAYSRV----WD---WERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH 226 (433)
Q Consensus 154 d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~----~d---~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ 226 (433)
T Consensus 209 d~~-G-~~~e~le~~~~~~~~k~~y~~-P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~-el~~~~~p~~~l~~ 284 (459)
T COG1167 209 DED-G-IDPEALEEALAQWKPKAVYVT-PTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYG-ELRYDGPPPPPLKA 284 (459)
T ss_pred CCC-C-CCHHHHHHHHHCCCCCEEEEC-CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCH-HHCCCCCCCCCHHH
T ss_conf 888-9-897999999850697289978-8963889874599999999999997598799867743-32158899834576
Q ss_pred C----C-EEEECCCCCC-CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH---H
Q ss_conf 2----3-5674045652-2567448983362056501664654322344556668999999997356489999999---9
Q gi|254780349|r 227 C----H-IVTTTTHKSL-RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQI---V 297 (433)
Q Consensus 227 A----D-vvt~sTHKtl-~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qv---v 297 (433)
T Consensus 285 ld~~~rViy~gSFSK~l~PglRlG~vv~p~-~~~~~~~~~k~~~~~~---~s~~~Q~~la~~l-~~G~~~~hl~~lR~~y 359 (459)
T COG1167 285 LDAPGRVIYLGSFSKTLAPGLRLGYVVAPP-ELIEKLLRLKQAADLG---PSSLSQAALAAFL-LSGHYDRHLRRLRREY 359 (459)
T ss_pred HCCCCCEEEECCCHHHHCCCCCEEEEECCH-HHHHHHHHHHHHHCCC---CCHHHHHHHHHHH-HCCHHHHHHHHHHHHH
T ss_conf 289997899913266514675549997299-9999999998762569---9899999999999-7285999999999999
Q ss_pred -HHHHHHHHHHHHCCCCCC--CCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf -888999999861685233--45888981263166556767999998885671880378998999988898512246667
Q gi|254780349|r 298 -LNSQALAKKLQFLGFDIV--SGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSG 374 (433)
Q Consensus 298 -~NA~~La~~L~~~G~~vv--~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~ai 374 (433)
T Consensus 360 ~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l-~~~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~-~~~~~Rl~~s~~ 437 (459)
T COG1167 360 ARRRDALLEALAEYLPELATWTRPEGGLFLWLEL-PEGIDARELLAAALEKGVVVTPLGSAFSADGD-PRNGLRLSFSSP 437 (459)
T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEC-CCCCCHHHHHHHHHHCCCEEECCCCCCCCCCC-CCCEEEEECCCC
T ss_conf 9999999999997478763772699558999986-99888899999999869979458866357898-898289988989
Q ss_pred HHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 3079998999999999999960
Q gi|254780349|r 375 TTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 375 TtrG~~e~em~~iA~li~~~L~ 396 (433)
T Consensus 438 ~-----~e~i~~gi~~l~~~~~ 454 (459)
T COG1167 438 S-----EEEIEEGIKRLAALLR 454 (459)
T ss_pred C-----HHHHHHHHHHHHHHHH
T ss_conf 9-----9999999999999999