HHsearch alignment for GI: 254780349 and conserved domain: PRK01278
>PRK01278 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional.
Probab=98.55 E-value=3e-05 Score=57.07 Aligned_cols=266 Identities=16% Similarity=0.193 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHHHHH-------CCC-CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCC---CHHHHHHHH
Q ss_conf 016799999999831-------548-74881233448411147665433333220136-658323565---989999999
Q gi|254780349|r 102 HSGSQMNQGVFLALM-------HPG-DSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPY-NVRKEDGLL---DMHEIESLA 169 (433)
Q Consensus 102 ~SG~~An~av~~ALl-------~pG-D~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y-~~d~~~~~I---D~d~~~~~a 169 (433)
T Consensus 95 ~sGsEAve~AlklAr~~~~~~g~t~r~~ii~~~~~yHG~t-~-~~~s~sg~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~ 172 (389)
T PRK01278 95 NSGAEAVECAIKTARRYQYGKGHPERYRIITFEGAFHGRT-L-ATIAATGQEKYLEGFGPLVDGFDQVPFGDIEALKAAI 172 (389)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC-C-CCCCCCCCHHHCCCCCCCCCCEEECCCCCHHHHHHHH
T ss_conf 8748999999999999888539999728999888888676-3-5113578844336668998882467789789999862
Q ss_pred HHHCCCEEEEEC------CCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCCC-CCC-CCEEEECCCCCCCC
Q ss_conf 860466789705------524353637999988641797899186201244-320001232-200-23567404565225
Q gi|254780349|r 170 IEYNPKLIIVGG------TAYSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPSP-VPH-CHIVTTTTHKSLRG 240 (433)
Q Consensus 170 ~~~kPklIi~G~------S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~P-l~~-ADvvt~sTHKtl~G 240 (433)
T Consensus 173 ~~-~iAaviiEPi~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEV~t-GfGRtG~~fa~e~~gv~PDiv~~g--K~l~g 248 (389)
T PRK01278 173 TP-NTAAILIEPIQGEGGIRPLPDEFLKGLRQLCDENGLLLIFDEVQC-GVGRTGKLFAHEWAGVTPDIMALA--KGIGG 248 (389)
T ss_pred CC-CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEC-CCCCCCCCCHHHCCCCCCCEEEEC--CCCCC
T ss_conf 88-817999968888889606999999999999986065387421000-777556642200367689867870--12468
Q ss_pred --CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--CCC-CC
Q ss_conf --6744898336205650166465432234455666899999999735648999999998889999998616--852-33
Q gi|254780349|r 241 --PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL--GFD-IV 315 (433)
Q Consensus 241 --PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~--G~~-vv 315 (433)
T Consensus 249 G~P~sav~~~-~-ei~~~~~~g~~~~T~~gnp~~~aaala~L--~~i~~--~~l~~~v~~~G~~l~~~L~~l~~~~p~~i 322 (389)
T PRK01278 249 GFPLGACLAT-E-EAAKGMTPGTHGSTYGGNPLAMAVGNAVL--DVVLA--PGFLDNVQKMGLYLKQKLESLVDRFPDVI 322 (389)
T ss_pred CCCEEEEEEC-H-HHHHHCCCCCCCCCCCCCHHHHHHHHHHH--HHHHH--CCHHHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 8742799863-8-87854368876779997999999999999--99986--46999999999999999999987686713
Q ss_pred CCCCCCCEEE-ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 4588898126-316655676799999888567188037899899998889851224666730799989999999999999
Q gi|254780349|r 316 SGGTDNHLML-VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQI 394 (433)
Q Consensus 316 ~ggTd~H~vl-vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~ 394 (433)
T Consensus 323 ~~vRG~Gl~~gie~~~---~~~~i~~~~~~~Gll~~----~~g------~~~lr~~-PpL~---it~~ei~~~~~~l~~a 385 (389)
T PRK01278 323 EEVRGEGLMLGLKCVV---PSRDLVAALRDEGLLTV----PAG------DNVVRLL-PPLI---ITEEEIDEALERLERA 385 (389)
T ss_pred EEEEEEEEEEEEEECC---CHHHHHHHHHHCCCEEE----ECC------CCEEEEE-CCCC---CCHHHHHHHHHHHHHH
T ss_conf 5564503699999458---89999999997993897----279------9979997-8813---9899999999999999
Q ss_pred HH
Q ss_conf 60
Q gi|254780349|r 395 LD 396 (433)
Q Consensus 395 L~ 396 (433)
T Consensus 386 l~ 387 (389)
T PRK01278 386 AE 387 (389)
T ss_pred HH
T ss_conf 97