HHsearch alignment for GI: 254780349 and conserved domain: PRK03715
>PRK03715 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional.
Probab=97.95 E-value=0.0027 Score=43.45 Aligned_cols=262 Identities=18% Similarity=0.226 Sum_probs=120.9
Q ss_pred CHHHHHHHHHHHHHHH------CCC-CEEEECCCCCCCCCCCCCCCCCCCCC-CCCCCCCCC---CCCCCCCHHHHHHHH
Q ss_conf 0016799999999831------548-74881233448411147665433333-220136658---323565989999999
Q gi|254780349|r 101 SHSGSQMNQGVFLALM------HPG-DSFMGLSLDSGGHLTHGSSVNMSGKW-FKAIPYNVR---KEDGLLDMHEIESLA 169 (433)
Q Consensus 101 p~SG~~An~av~~ALl------~pG-D~Il~~~l~~GGHlshg~~~~~~g~~-~~~~~y~~d---~~~~~ID~d~~~~~a 169 (433)
T Consensus 99 ~~sGsEAvE~AlKlAr~y~~~~~~gr~~ii~~~~~yHG~T-~-~~~s~sg~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~ 176 (395)
T PRK03715 99 ANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRT-L-ATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLI 176 (395)
T ss_pred ECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC-H-HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
T ss_conf 1875889999999999986246899845999757889874-0-2210468644455678988996755545589999734
Q ss_pred HHHCCCE--EEE----ECCC-C-CCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCCC-CCC-CCEEEECCCCCC
Q ss_conf 8604667--897----0552-4-353637999988641797899186201244-320001232-200-235674045652
Q gi|254780349|r 170 IEYNPKL--IIV----GGTA-Y-SRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPSP-VPH-CHIVTTTTHKSL 238 (433)
Q Consensus 170 ~~~kPkl--Ii~----G~S~-y-~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~P-l~~-ADvvt~sTHKtl 238 (433)
T Consensus 177 ---~~~~aAviiEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~fa~e~~gv~PDiv~~g--Kgl 250 (395)
T PRK03715 177 ---TDKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-GCGRTGTLFAYELAGIEPDIMTLG--KGI 250 (395)
T ss_pred ---CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCC-CCCCCCCCCCCCCCCCCCCEEEEC--CHH
T ss_conf ---99807999937888779852988999999999951897356201103-888666853000489999989975--244
Q ss_pred CC--CCCEEEEECCCCHHHHCCHHHCHHHH----HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--
Q ss_conf 25--67448983362056501664654322----34455666899999999735648999999998889999998616--
Q gi|254780349|r 239 RG--PRGGLIMTNHADLAKKINSAIFPGLQ----GGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-- 310 (433)
Q Consensus 239 ~G--PrgGiI~~~~~e~~~~i~~avfPg~q----g~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-- 310 (433)
T Consensus 251 ~gG~Pl~av~~~-~-~i~~-----~~~g~~g~T~~gnpla~aaa~a~--L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~ 319 (395)
T PRK03715 251 GGGVPLAALLAK-A-EVAV-----FEAGDQGGTYNGNPLMTAVGYAV--ISQLVA--PGFLEGVRARGEYLKEKLLELSA 319 (395)
T ss_pred HCCCCEEEEEEC-H-HHCC-----CCCCCCCCCCCCCHHHHHHHHHH--HHHHHC--CCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 289852899982-6-7424-----77898887989971899999999--999962--68999999999999999998650
Q ss_pred CCCCCCCCCCCCEEE-ECCCCCCCCHHHH--HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHH
Q ss_conf 852334588898126-3166556767999--9988856718803789989999888985122466673079998999999
Q gi|254780349|r 311 GFDIVSGGTDNHLML-VDLRSKRMTGKRA--ESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYI 387 (433)
Q Consensus 311 G~~vv~ggTd~H~vl-vdl~~~~~~G~~a--~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~i 387 (433)
T Consensus 320 ~~~i~-~vRG~Gl~~~iel~~-~~~~~~~~~~~~~~~~gll~~~---~~-------~n~irl~-PpL~---it~~eid~~ 383 (395)
T PRK03715 320 ERGLE-GERGEGLLRALLLGK-DIGPQIVEKARDMQPDGLLLNA---PR-------PNLLRFM-PALN---VTTDEIDQM 383 (395)
T ss_pred CCCCE-EEEECCEEEEEEECC-CCCHHHHHHHHHHHHCCEEEEC---CC-------CCEEEEE-CCCC---CCHHHHHHH
T ss_conf 39913-574355899999678-8708999999999839989922---89-------9989997-9943---889999999
Q ss_pred HHHHHHHHHC
Q ss_conf 9999999602
Q gi|254780349|r 388 GELIAQILDG 397 (433)
Q Consensus 388 A~li~~~L~~ 397 (433)
T Consensus 384 ~~~l~~aL~~ 393 (395)
T PRK03715 384 IAMLRSVLDK 393 (395)
T ss_pred HHHHHHHHHH
T ss_conf 9999999998