HHsearch alignment for GI: 254780349 and conserved domain: PRK05093
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed.
Probab=98.57 E-value=8.4e-05 Score=53.96 Aligned_cols=266 Identities=13% Similarity=0.156 Sum_probs=130.9
Q ss_pred CHHHHHHHHHHHHHHH-------C-CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCC---CHHHHHHH
Q ss_conf 0016799999999831-------5-487488123344841114766543333322013665832-3565---98999999
Q gi|254780349|r 101 SHSGSQMNQGVFLALM-------H-PGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKE-DGLL---DMHEIESL 168 (433)
Q Consensus 101 p~SG~~An~av~~ALl-------~-pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~-~~~I---D~d~~~~~ 168 (433)
T Consensus 103 ~~SGSEAvE~AiklAr~~~~~~~~~~r~~ii~~~~~yHG~t~--~a~s~~g~~~~~~~~~p~~~~~~~~p~~d~~~l~~~ 180 (403)
T PRK05093 103 ANSGAEANEAALKLARRYACDRHGPEKTEIIAFHNSFHGRTL--FTVSVGGQPKYSDGFGPKPADITHVPFNDLAALKAV 180 (403)
T ss_pred ECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCH--HHHHHCCCCHHCCCCCCCCCCCEECCCCCHHHHHHC
T ss_conf 386778999999999999997289987547777588688836--877625880110277899977565563368888603
Q ss_pred HHHHCCCEEEEEC------CCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCC-CCCCC-CCEEEECCCCCCC
Q ss_conf 9860466789705------524353637999988641797899186201244-3200012-32200-2356740456522
Q gi|254780349|r 169 AIEYNPKLIIVGG------TAYSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHP-SPVPH-CHIVTTTTHKSLR 239 (433)
Q Consensus 169 a~~~kPklIi~G~------S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~-~Pl~~-ADvvt~sTHKtl~ 239 (433)
T Consensus 181 ~~-~~iaAviiEPi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~t-G~GRtG~~fa~e~~gv~PDiv~~g--Kglg 256 (403)
T PRK05093 181 ID-DKTCAVVVEPIQGEGGVIPATPEFLQGLRELCDKHNALLIFDEVQT-GMGRTGDLYAYMHYGVTPDILTSA--KALG 256 (403)
T ss_pred CC-CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEE-CCCCCCCCCCCCCCCCCCCEEEEC--CCCC
T ss_conf 37-7447999957667899758999999999986301683798601342-688777752223689899889973--0015
Q ss_pred C--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH------CC
Q ss_conf 5--674489833620565016646543223445566689999999973564899999999888999999861------68
Q gi|254780349|r 240 G--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQF------LG 311 (433)
Q Consensus 240 G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~------~G 311 (433)
T Consensus 257 gG~Plsav~~~-~-~i~~~~~~~~~g~T~~g~pla~aaala~L--~~i~~------~~l~~~a~~~G~~l~~~L~~l~~~ 326 (403)
T PRK05093 257 GGFPIGAMLTT-A-EIASHFKVGTHGSTYGGNPLACAVAEAVF--DIINT------PEVLEGVKAREQRFVDGLQKINEK 326 (403)
T ss_pred CCCCEEEEEEC-H-HHHHHCCCCCCCCCCCCCHHHHHHHHHHH--HHHHH------CCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88642799872-8-87865078772658985899999999999--99963------449999999999999999999862
Q ss_pred CCCCCCCCCCCEEE-ECCCCC-CCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf 52334588898126-316655-6767999998885671880378998999988898512246667307999899999999
Q gi|254780349|r 312 FDIVSGGTDNHLML-VDLRSK-RMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGE 389 (433)
Q Consensus 312 ~~vv~ggTd~H~vl-vdl~~~-~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~ 389 (433)
T Consensus 327 ~~~i~~VRG~Glm~giel~~~~~~~a~~i~~~~~~~Gll~~~~g----------~n~irl~PPL~----it~~eid~~l~ 392 (403)
T PRK05093 327 YGVFSEIRGKGLLIGAELNEQYKGRARDFLYAAAEEGVMVLVAG----------PDVLRFAPSLV----IPDADIDEGLA 392 (403)
T ss_pred CCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCEEECCC----------CCEEEEECCCC----CCHHHHHHHHH
T ss_conf 89826665412699999658752169999999996892895279----------99799978844----89999999999
Q ss_pred HHHHHHH
Q ss_conf 9999960
Q gi|254780349|r 390 LIAQILD 396 (433)
Q Consensus 390 li~~~L~ 396 (433)
T Consensus 393 ~l~~al~ 399 (403)
T PRK05093 393 RFEKAVA 399 (403)
T ss_pred HHHHHHH
T ss_conf 9999999