HHsearch alignment for GI: 254780349 and conserved domain: PRK05639

Probab=98.44  E-value=0.00027  Score=50.39  Aligned_cols=189  Identities=14%  Similarity=0.178  Sum_probs=95.0

Q ss_pred             CCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCC-CCCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCC
Q ss_conf             4353637999988641797899186201244-32000123-2200-23567404565225--674489833620565016
Q gi|254780349|r  184 YSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPS-PVPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKIN  258 (433)
Q Consensus       184 y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~-Pl~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~  258 (433)
T Consensus       239 ~~~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~fa~e~~gv~PDii~~g--Kgl~~G~plsav-~~~~-~i~~~~~  313 (457)
T PRK05639        239 VPPENFFKELKKLLNELGILLVMDEVQT-GIGRTGKWFASEWFSVKPDMIIFG--KGVASGMGLSGV-IGRK-EIMDITS  313 (457)
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEEECCCC-CCCCCCCHHHHHCCCCCCCEEEEC--CHHCCCCCCEEE-EECH-HHHHHHC
T ss_conf             2898998899999976398687310322-776256545664379999999977--221079870799-9848-8775405


Q ss_pred             HHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH----HHC--CCCCCCCCCCCCEEE-ECCCCC
Q ss_conf             6465432234455666899999999735648999999998889999998----616--852334588898126-316655
Q gi|254780349|r  259 SAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKL----QFL--GFDIVSGGTDNHLML-VDLRSK  331 (433)
Q Consensus       259 ~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L----~~~--G~~vv~ggTd~H~vl-vdl~~~  331 (433)
T Consensus       314 g~~~~T~~gnp-la~Aaa~a~--L~~i~~------~~l~~~a~~~g~~l~~~L~~L~~~~~~v~dVRG~GL~~giel~~~  384 (457)
T PRK05639        314 GSALLTPAANP-VISAAAEAT--LEIIEE------ENLLKNALEVGNFIMKRLEEMKEVFEIIGDVRGKGLMIGVEIVKE  384 (457)
T ss_pred             CCCCCCCCCCH-HHHHHHHHH--HHHHHH------CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECC
T ss_conf             76555788652-999999999--999996------559999999999999999998863897565503780999999437


Q ss_pred             --CCC---HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf             --676---7999998885671880378998999988898512246667307999899999999999996025
Q gi|254780349|r  332 --RMT---GKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDGS  398 (433)
Q Consensus       332 --~~~---G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~~  398 (433)
T Consensus       385 ~~~~~~~~~~~v~~~~~~~Gll~~~~g~~--------~nvirl~-PPL~---it~~eid~~~~il~~al~ea  444 (457)
T PRK05639        385 NGRPDPEMTGKICWRAFELGLILPSYGMF--------GNVIRIT-PPLV---LTKEVAEKGLEIIERAIKDA  444 (457)
T ss_pred             CCCCCHHHHHHHHHHHHHCCCEEECCCCC--------CCEEEEE-CCEE---CCHHHHHHHHHHHHHHHHHH
T ss_conf             89989999999999999679688158999--------9989997-8931---68999999999999999999