HHsearch alignment for GI: 254780349 and conserved domain: PRK08360

Probab=98.59  E-value=2.4e-05  Score=57.77  Aligned_cols=189  Identities=19%  Similarity=0.213  Sum_probs=99.9

Q ss_pred             CHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCC-CCCCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCHHHCH
Q ss_conf             37999988641797899186201244-3200012-32200-23567404565225--67448983362056501664654
Q gi|254780349|r  189 DWERFRSIADSIGAYLMADISHISGL-VVGGQHP-SPVPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINSAIFP  263 (433)
Q Consensus       189 d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~-~Pl~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~avfP  263 (433)
T Consensus       226 yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~fa~e~~gv~PDiv~~g--Kgl~~G~Pisav~~~-~-ei~~~~~~~~h~  300 (443)
T PRK08360        226 YFKKVKKILDEHGILLVVDEVQS-GLGRTGKWFAIEHFGVEPDIITLG--KPLGGGLPISATIGR-A-EIMDSLPPLSHA  300 (443)
T ss_pred             HHHHHHHHHHHCCCEEEEECCCC-CCCCCCHHHHHHCCCCCCCEEEEC--CCCCCCCCCCCCCCH-H-HHHHHCCCCCCC
T ss_conf             97689887776590798511303-876544055764579698657763--444578886231114-9-898504887656


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCEEE-ECCC-CCCC------
Q ss_conf             32234455666899999999735648999999998889999998616--852334588898126-3166-5567------
Q gi|254780349|r  264 GLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL--GFDIVSGGTDNHLML-VDLR-SKRM------  333 (433)
Q Consensus       264 g~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~--G~~vv~ggTd~H~vl-vdl~-~~~~------  333 (433)
T Consensus       301 ~T~~gnpl~caaa~a~L--~~i~~~--~l~~~~~~~G~~l~~~L~~l~~~~p~i~dVRG~Gl~~gie~v~d~~~~~~~~~  376 (443)
T PRK08360        301 FTLSGNPTASRAALAVI--EEIEEK--DLLKRAEKLGNYTKKRLEEMKEKHELIGDVRGLGLMIGVDLVKDRETKERAYE  376 (443)
T ss_pred             CCCCCCHHHHHHHHHHH--HHHHHC--CHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCCCCCCCCHH
T ss_conf             68789979999999999--999863--59999999999999999998871898885203646999998127765544579


Q ss_pred             CHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf             6799999888567188037899899998889851224666730799989999999999999602577
Q gi|254780349|r  334 TGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDGSSS  400 (433)
Q Consensus       334 ~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~~~~  400 (433)
T Consensus       377 ~~~~i~~~~~~~Glli~~----------~~~~~i~~~PPL~----it~~eid~~~~~l~~al~ev~~  429 (443)
T PRK08360        377 ETKKVVWRAFELGLIVTF----------FQGNVLRIEPPLT----IEEEVLDEGLDILEEAIEDVEE  429 (443)
T ss_pred             HHHHHHHHHHHCCCEEEE----------CCCCEEEEECCCC----CCHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999968938811----------6999899979912----8999999999999999999985