HHsearch alignment for GI: 254780349 and conserved domain: PRK13355
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional.
Probab=99.17 E-value=2e-08 Score=79.19 Aligned_cols=284 Identities=18% Similarity=0.193 Sum_probs=157.5
Q ss_pred HHHCCCCCEECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHH
Q ss_conf 987188630100001679-9999999831548748812334484111476654333332201366583235-65989999
Q gi|254780349|r 89 KKLFNVNFVNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDG-LLDMHEIE 166 (433)
Q Consensus 89 ~~lF~a~~anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~-~ID~d~~~ 166 (433)
T Consensus 201 ~~~~~~~~~di~~gnGvSE~i~~am~Alln~GDeVLiP~P~Y---Plyta~--v~L~Gg~pV~y~~dEe~~w~PDiedLe 275 (518)
T PRK13355 201 KNIPNVDIDDIYTGNGVSELINLSMSALLDDGDEVLVPSPDY---PLWTAC--VNLAGGTAVHYRCDEESEWYPDIDDIR 275 (518)
T ss_pred CCCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCC---CCHHHH--HHHCCCEEEEEEECCCCCCCCCHHHHH
T ss_conf 699998740356547767999999998368999898259999---778999--886098788987452217788999998
Q ss_pred HHHHHHCCCEEEEECC------CCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHH-CCCCCCCCC-C--EEE-ECCC
Q ss_conf 9998604667897055------243536379999886417978991862012443200-012322002-3--567-4045
Q gi|254780349|r 167 SLAIEYNPKLIIVGGT------AYSRVWDWERFRSIADSIGAYLMADISHISGLVVGG-QHPSPVPHC-H--IVT-TTTH 235 (433)
Q Consensus 167 ~~a~~~kPklIi~G~S------~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g-~~~~Pl~~A-D--vvt-~sTH 235 (433)
T Consensus 276 ~kIT-~kTKAIVInNPNNPTGAVyS-~E~LeeIaeiArehdLiIISDEI-Y~~LvYDg~~h~Siasla~d~~~It~NG~S 352 (518)
T PRK13355 276 SKIT-SKTKAIVIINPNNPTGALYP-KEVLQQIVDIAREHQLIIFSDEI-YDRLVMDGLEHTSIASLAPDLFCVTFSGLS 352 (518)
T ss_pred HHCC-CCCEEEEEECCCCCCCCCCC-HHHHHHHHHHHHHCCEEEEECCC-HHHCCCCCCCCCCHHHCCCCCEEEEECCCC
T ss_conf 5357-15579999689898887889-99999999999985969996230-221006898630476708864599988776
Q ss_pred CCCC--CCCCEE-EEECCCCHHHHCCHHHC----HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH---HHHHHHHHHHHH
Q ss_conf 6522--567448-98336205650166465----4322344556668999999997356489999---999988899999
Q gi|254780349|r 236 KSLR--GPRGGL-IMTNHADLAKKINSAIF----PGLQGGPFMHSIAAKAVAFGEALSSEFRDYA---KQIVLNSQALAK 305 (433)
Q Consensus 236 Ktl~--GPrgGi-I~~~~~e~~~~i~~avf----Pg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya---~qvv~NA~~La~ 305 (433)
T Consensus 353 KsyaMtGWRiGwmv~sG~~~~a~~~Ie~l~~Las~~lcsn-vpaQ~A~~-aAL~g--~qs~~d~~~~~~rl~erRdlv~e 428 (518)
T PRK13355 353 KSHMIAGFRAGWMMLSGNKRHAKDYIEGLNMLANMRMCSN-VPAQSVVQ-TALGG--HQSVKDYTVPGGRLYDQRELVYD 428 (518)
T ss_pred CCEECCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC-HHHHHHHH-HHHCC--CCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 6633220113665424858999999999999860456636-89999999-98628--76489999999999999999999
Q ss_pred HHHHC-CCCCCC-CCCCCCEEE--ECCCCCCC-C-HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCC
Q ss_conf 98616-852334-588898126--31665567-6-799999888567188037899899998889851224666730799
Q gi|254780349|r 306 KLQFL-GFDIVS-GGTDNHLML--VDLRSKRM-T-GKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGF 379 (433)
Q Consensus 306 ~L~~~-G~~vv~-ggTd~H~vl--vdl~~~~~-~-G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~ 379 (433)
T Consensus 429 ~Ln~IpGvscvkP~GA--FYlFPkID~~~~~i~dDeeFal~LL~Ee~VlV----VPGsaFG~~~pghfRIsya--ps~e~ 500 (518)
T PRK13355 429 MLNAIPGISAVKPKAA--FYIFPKIDVKIFNIHSDEQFALDLLHEKHILI----SHGGAFNWDKPDHFRVVYL--PRLGM 500 (518)
T ss_pred HHHCCCCCEECCCCEE--EEEEEECCCCCCCCCCHHHHHHHHHHHCCEEE----ECCCCCCCCCCCEEEEEEC--CCHHH
T ss_conf 9835999765899815--89955415344899899999999998589999----5875448999897999927--99999
Q ss_pred CHHHHHHHHHHHH
Q ss_conf 9899999999999
Q gi|254780349|r 380 KEKDFEYIGELIA 392 (433)
Q Consensus 380 ~e~em~~iA~li~ 392 (433)
T Consensus 501 L~EA~~RI~~FL~ 513 (518)
T PRK13355 501 LEETMDELDDFFS 513 (518)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999999