HHsearch alignment for GI: 254780349 and conserved domain: PRK13578
>PRK13578 ornithine decarboxylase; Provisional.
Probab=99.64 E-value=9.3e-13 Score=109.33 Aligned_cols=332 Identities=18% Similarity=0.159 Sum_probs=202.0
Q ss_pred CCCCCHHHHHHHHCCCCCCCCCCCCCC----------------CCCCCCHHHHHH----------------HHHHHHHHH
Q ss_conf 010298999983051028865798887----------------533600679999----------------999999999
Q gi|254780349|r 42 ENIVSRAVLEAQGSILTNKYAEGYPSK----------------RYYGGCQYVDDI----------------ENIAIERAK 89 (433)
Q Consensus 42 EN~~S~~v~~~l~S~l~nkyaeG~pg~----------------ryy~G~~~~d~i----------------E~la~~~a~ 89 (433)
T Consensus 105 ~~llPpff~al~~y~~~~~~s~~~PGH~gG~~f~k~p~G~~f~~f~Gen~fraD~~~~~~~lg~ll~h~G~~~eAq~~AA 184 (720)
T PRK13578 105 ENLLPPFFRTLTQYVEMGNSTFDCPGHQGGQFFRKHPAGRQFYDFFGENLFRSDMCNADVKLGDLLIHEGAAKDAQKHAA 184 (720)
T ss_pred HHCCCHHHHHHHHHHHCCCCEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 83698689999999854685012898877542215822889999850677776630000244330037884479999999
Q ss_pred HHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC-CCCCCCCCC-----CCCCCCC----CCCCCC
Q ss_conf 871886301000016799999999831548748812334484111476-654333332-----2013665----832356
Q gi|254780349|r 90 KLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGS-SVNMSGKWF-----KAIPYNV----RKEDGL 159 (433)
Q Consensus 90 ~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~-~~~~~g~~~-----~~~~y~~----d~~~~~ 159 (433)
T Consensus 185 ~~FGAD~TyFvvNGTS~~nk~v~~a~~~pGD~VLvd---RN~HKSv~~GALIlsGA~PVYl~p~rN~~GiiggI~~--~~ 259 (720)
T PRK13578 185 KVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFD---RNNHKSNHHGALIQAGATPVYLETARNPFGFIGGIDA--HC 259 (720)
T ss_pred HHHCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEC---CCCHHHHHHHHHHHCCCEEEEECCCCCCCCEECCCCH--HH
T ss_conf 984998269995771088999999745899999965---6435777778898669767996664675651167485--75
Q ss_pred CCHHHHHHHHHH--------HCC-CEEEEE-CCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCC--CC--CC
Q ss_conf 598999999986--------046-678970-55243536379999886417978991862012443200012--32--20
Q gi|254780349|r 160 LDMHEIESLAIE--------YNP-KLIIVG-GTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHP--SP--VP 225 (433)
Q Consensus 160 ID~d~~~~~a~~--------~kP-klIi~G-~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~--~P--l~ 225 (433)
T Consensus 260 f~~~~i~~~I~~~~~~~a~~~~p~~~aVit~~TYdGi~yn~~~I~~~i~~~~~~ilfDEAw~~~~~F~P~~~d~~p~~l~ 339 (720)
T PRK13578 260 FDEEYLREQIREVAPERADEARPFRLAIIQLGTYDGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCSPLLLE 339 (720)
T ss_pred CCHHHHHHHHHHHCHHHHCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHHCCEEEEECCHHHHHHCCCCCCCCCCCCCC
T ss_conf 27577898887436333123488618999468753542349999999864078389851102144328531124643334
Q ss_pred C-CC----EEEECCCCCCCC-CCCEEEEECCCCH--------HHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
Q ss_conf 0-23----567404565225-6744898336205--------65016646543223445566689999999973564899
Q gi|254780349|r 226 H-CH----IVTTTTHKSLRG-PRGGLIMTNHADL--------AKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRD 291 (433)
Q Consensus 226 ~-AD----vvt~sTHKtl~G-PrgGiI~~~~~e~--------~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~ 291 (433)
T Consensus 340 ~gaddp~i~vtQStHK~LaafSQaS~IHvkd~hI~g~~r~v~~~rfn~a~mmh~STSPsY~L~ASLDv~A~m~~g~~G~~ 419 (720)
T PRK13578 340 LNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGESGRR 419 (720)
T ss_pred CCCCCCCEEEEEEHHHHHHHHCHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHH
T ss_conf 58777650466306555443222210122454346665667889999999877078808999998799999973121458
Q ss_pred HHHHHHHHHHHHHHHHHH--CCCC-----CCC----------------------------CC--CCCCEEEECC------
Q ss_conf 999999888999999861--6852-----334----------------------------58--8898126316------
Q gi|254780349|r 292 YAKQIVLNSQALAKKLQF--LGFD-----IVS----------------------------GG--TDNHLMLVDL------ 328 (433)
Q Consensus 292 Ya~qvv~NA~~La~~L~~--~G~~-----vv~----------------------------gg--Td~H~vlvdl------ 328 (433)
T Consensus 420 L~~e~i~~aie~Rk~il~~~~~~k~~~p~~v~g~~~~~~~~e~l~~d~~~w~~~Pg~~WHGf~g~~~~~~~lDP~Klti~ 499 (720)
T PRK13578 420 LWMDCVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLT 499 (720)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCCCCCCCCEECCCCEEEEE
T ss_conf 99999999999999998654442255752126860354888886125010246887422465555766342267379985
Q ss_pred -----------CCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf -----------6556767999998885671880378998999988898512246667307999899999999999
Q gi|254780349|r 329 -----------RSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIA 392 (433)
Q Consensus 329 -----------~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~ 392 (433)
T Consensus 500 tPGi~~~~g~~~~~GIpA~il~~yLre~gIvvEktd----l~~I-----L-----fL~T~G~t~~k~~~Lv~aL~ 560 (720)
T PRK13578 500 TPGIDAETGEYEDFGVPATILANYLRENGIVPEKCD----LNSI-----L-----FLLTPAEDMAKLQQLVAMLA 560 (720)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECC----CCEE-----E-----EEECCCCCHHHHHHHHHHHH
T ss_conf 367455665421368758999999987690798547----7507-----9-----99726788899999999999