HHsearch alignment for GI: 254780349 and conserved domain: TIGR01328

>TIGR01328 met_gam_lyase methionine gamma-lyase; InterPro: IPR006237 This family of sequences is a methionine gamma-lyase subset of a family of PLP-dependent trans-sulphuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine..
Probab=99.11  E-value=1.7e-09  Score=86.61  Aligned_cols=222  Identities=19%  Similarity=0.235  Sum_probs=158.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             00679999999999999871886301000016799999999831548748812334484111476654333332201366
Q gi|254780349|r   73 GCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN  152 (433)
Q Consensus        73 G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~  152 (433)
T Consensus        57 gNPTv~~LE~----riA~LEg~EAa-vAt~SGMgAi~A~l~~~lkAgDh~i~d~~lYGC--------Tfall~~~ltkfg  123 (392)
T TIGR01328        57 GNPTVDLLER----RIAELEGAEAA-VATASGMGAIAATLLSLLKAGDHVISDETLYGC--------TFALLEDALTKFG  123 (392)
T ss_pred             CCCHHHHHHH----HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC--------HHHHHHHHHHHHC
T ss_conf             7713778888----98754204677-887512899999999998528757743874201--------4899873267737


Q ss_pred             CCCCCCCCCHHHHHHHHHHHCC--CEEEEECCCCC--CCCCHHHHHHHHHHCC-CEEEECCCCHHHHHHHHCCCCCCCC-
Q ss_conf             5832356598999999986046--67897055243--5363799998864179-7899186201244320001232200-
Q gi|254780349|r  153 VRKEDGLLDMHEIESLAIEYNP--KLIIVGGTAYS--RVWDWERFRSIADSIG-AYLMADISHISGLVVGGQHPSPVPH-  226 (433)
Q Consensus       153 ~d~~~~~ID~d~~~~~a~~~kP--klIi~G~S~y~--~~~d~~~l~eIa~~~g-a~l~~D~aH~~GLIa~g~~~~Pl~~-  226 (433)
T Consensus       124 i~v~--f~~~~~pee~~a~i~dnT~ivYfETPaNPtm~liD~e~v~r~A~~~gG~kVivDNTf-----atP~lt~P~alG  196 (392)
T TIGR01328       124 IDVK--FVDMASPEEVKAAIKDNTKIVYFETPANPTMKLIDLELVVRVAHEKGGVKVIVDNTF-----ATPYLTRPVALG  196 (392)
T ss_pred             CEEE--EECCCCHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC-----CCHHHCCHHHCC
T ss_conf             5279--831787799998448997799986599875257759999999975298289985662-----770013803618


Q ss_pred             CCEEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHH---CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
Q ss_conf             2356740456522567---4489833620565016646---543223445566689999999973564899999999888
Q gi|254780349|r  227 CHIVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAI---FPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNS  300 (433)
Q Consensus       227 ADvvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~av---fPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA  300 (433)
T Consensus       197 ~D~VVHSATKYigGHgDvVaG~~~G~~-e~~q~iR~~g~KD~tG~ViSPfdAwL~lRG------Lk-TL~~RM~rhsenA  268 (392)
T TIGR01328       197 VDVVVHSATKYIGGHGDVVAGVLIGDA-ELLQRIRLVGVKDMTGAVISPFDAWLVLRG------LK-TLAVRMKRHSENA  268 (392)
T ss_pred             CCEEEECCCCCCCCCHHHHHHHHCCCH-HHHHHHCCCCCCCCCCCEECHHHHHHHHHH------HH-HHHHHHHHHHHHH
T ss_conf             776894241213761221122110775-667440111100056650055789999743------66-7778887730538


Q ss_pred             HHHHHHHHHCC--CCCCCCCCCCC
Q ss_conf             99999986168--52334588898
Q gi|254780349|r  301 QALAKKLQFLG--FDIVSGGTDNH  322 (433)
Q Consensus       301 ~~La~~L~~~G--~~vv~ggTd~H  322 (433)
T Consensus       269 ~kvAe~Lk~HPaVe~V~YPG~~~h  292 (392)
T TIGR01328       269 EKVAEYLKEHPAVEKVYYPGLEEH  292 (392)
T ss_pred             HHHHHHHHCCCCCCEEECCCCCCC
T ss_conf             999998523886021236887788