HHsearch alignment for GI: 254780349 and conserved domain: TIGR01977
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein; InterPro: IPR010969 This entry describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulphurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N terminus. The function of members of this family are unknown..
Probab=99.65 E-value=1.6e-13 Score=114.69 Aligned_cols=331 Identities=19% Similarity=0.288 Sum_probs=216.3
Q ss_pred CCCCC-CHHHHHHHHCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHCCCCC-EECCC-HHHHHHHHHHHHH-H
Q ss_conf 30102-98999983051028865798887-5336006799999999999998718863-01000-0167999999998-3
Q gi|254780349|r 41 SENIV-SRAVLEAQGSILTNKYAEGYPSK-RYYGGCQYVDDIENIAIERAKKLFNVNF-VNVQS-HSGSQMNQGVFLA-L 115 (433)
Q Consensus 41 SEN~~-S~~v~~~l~S~l~nkyaeG~pg~-ryy~G~~~~d~iE~la~~~a~~lF~a~~-anvqp-~SG~~An~av~~A-L 115 (433)
T Consensus 7 ATtyPKP~ev~~a~~~~~~~-~g-g~~gRG~~~~~l~~~~~v~E-tR~~lA~Lf~~~~~~~v~Ft~nAT~aLN~~L~Gl~ 83 (384)
T TIGR01977 7 ATTYPKPDEVYEAMADFLKN-YG-GSPGRGRYRLALRASREVEE-TRELLAKLFNAPSKAHVVFTNNATTALNIALKGLI 83 (384)
T ss_pred CCCCCCHHHHHHHHHHHHHH-CC-CCCCCCCCHHHHHCCCHHHH-HHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCC
T ss_conf 56899738999999999873-48-75688875034541422889-99999998488974627840607799999984330
Q ss_pred HC--CCCEEEECCCCCCCCCCCCCCCCC-CCC--CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEE-CCCC-CCCC
Q ss_conf 15--487488123344841114766543-333--322013665832356598999999986046678970-5524-3536
Q gi|254780349|r 116 MH--PGDSFMGLSLDSGGHLTHGSSVNM-SGK--WFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVG-GTAY-SRVW 188 (433)
Q Consensus 116 l~--pGD~Il~~~l~~GGHlshg~~~~~-~g~--~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G-~S~y-~~~~ 188 (433)
T Consensus 84 lknr~g~hVi~t~mEH---NsV~RPL~~L~~~~~g~~~~iv~~~~-~G~~~~e~i~~~~~~~kTk~iv~~HaSNV~G~il 159 (384)
T TIGR01977 84 LKNREGDHVITTPMEH---NSVLRPLEKLKEERIGVEITIVKCDN-EGLISPERIKRAIKKNKTKLIVVSHASNVTGTIL 159 (384)
T ss_pred CCCCCCCCEEECCCCH---HHHHHHHHHHHHCCCCEEEEEECCCC-CCCCCHHHHHHHCCCCCCCEEEEECHHHHCCCCC
T ss_conf 0055999678647602---36643899997359975899862788-8521679999853378830043220030103112
Q ss_pred CHHHHH-HHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC----CCEEEECCCCCCCCCCC--EEEEECCCCHHHHCCHHH
Q ss_conf 379999-88641797899186201244320001232200----23567404565225674--489833620565016646
Q gi|254780349|r 189 DWERFR-SIADSIGAYLMADISHISGLVVGGQHPSPVPH----CHIVTTTTHKSLRGPRG--GLIMTNHADLAKKINSAI 261 (433)
Q Consensus 189 d~~~l~-eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~----ADvvt~sTHKtl~GPrg--GiI~~~~~e~~~~i~~av 261 (433)
T Consensus 160 piEEIgR~lA~e~g~~~~~DAaQtAGv~-------~Id~~~~~i~~lAF~GHKgLlGP~GtGGl~~~-e-~~~~~l-~pl 229 (384)
T TIGR01977 160 PIEEIGRELAKENGIFFILDAAQTAGVI-------PIDMEELAIDMLAFTGHKGLLGPQGTGGLIIK-E-GIKEIL-KPL 229 (384)
T ss_pred CHHHHHHHHHHHCCCEEEEECCCCCCCC-------HHCCCHHHCCEEEECCCHHHHCCCCCEEEEEE-C-CHHHHH-HHH
T ss_conf 5789999999867973998320003754-------10103220676763775220011363157887-3-705674-532
Q ss_pred CHH-------------------HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCC-CCCC
Q ss_conf 543-------------------22344556668999999997356489999999988899999986-16852334-5888
Q gi|254780349|r 262 FPG-------------------LQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQ-FLGFDIVS-GGTD 320 (433)
Q Consensus 262 fPg-------------------~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~-~~G~~vv~-ggTd 320 (433)
T Consensus 230 ~~GGTGs~S~~~~~P~~~PdrfE~GTLN~pGI~gL~agik~~~~~gi~~i~~kE~~l~~~l~~~L~~~~~V~iyG~~d~~ 309 (384)
T TIGR01977 230 KSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKELKLTEKLLNGLKEIKKVKIYGPKDPA 309 (384)
T ss_pred CCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHH
T ss_conf 06887545344457760432011440037999999888788756447789999999999998740167806762770343
Q ss_pred CCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCC---CC--CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 98126316655676799999888567188037899899---99--88898512246667307999899999999999
Q gi|254780349|r 321 NHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDP---ES--PFITSGIRLGTPSGTTRGFKEKDFEYIGELIA 392 (433)
Q Consensus 321 ~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~---~~--~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~ 392 (433)
T Consensus 310 ~~~~vvSf~~~g~d~~~va~~L~~~~~I~~RtGlHCAPLAH~~~GT~~~Gt~R~S~gyFnt----~ee~~~l~~al~ 382 (384)
T TIGR01977 310 KRVGVVSFTVEGIDSEEVADILDEKFDIAVRTGLHCAPLAHKTIGTFATGTIRLSLGYFNT----EEEIEKLVEALS 382 (384)
T ss_pred HCCCEEEEEECCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCCCEEEEECCCCCC----HHHHHHHHHHHH
T ss_conf 3267589983488877899999861891897676664123035311676538872787788----899999999985