HHsearch alignment for GI: 254780349 and conserved domain: TIGR02006
>TIGR02006 IscS cysteine desulfurase IscS; InterPro: IPR010240 This entry represents cysteine deusulphurase (IscS), one of several cysteine desulphurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulphur cluster assembly.; GO: 0030170 pyridoxal phosphate binding, 0031071 cysteine desulfurase activity, 0006534 cysteine metabolic process.
Probab=97.64 E-value=0.003 Score=43.13 Aligned_cols=338 Identities=17% Similarity=0.223 Sum_probs=195.2
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH-HHHHHHHHH---
Q ss_conf 4301029899998305102886579888753360067999999999999987188630100001679-999999983---
Q gi|254780349|r 40 ASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQ-MNQGVFLAL--- 115 (433)
Q Consensus 40 ASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~-An~av~~AL--- 115 (433)
T Consensus 10 ~~t~P~~~~v~~~m~~~~~~~g~fGnP~s~sh~fGW~a~~~v~~ar~~~~~~~~~d~~ei~ftsGate~~nl~i~G~a~f 89 (404)
T TIGR02006 10 AATTPVDKRVAEKMLEYLTEKGNFGNPASRSHKFGWEAEEAVENARNEVAELIGADSREIVFTSGATESDNLAIKGVAKF 89 (404)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 35686458999999998874156688642343345306889999999999984588740787237753024788889999
Q ss_pred -HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEE-EEE-CCCCCCCCCHHH
Q ss_conf -15487488123344841114766543333322013665832356598999999986046678-970-552435363799
Q gi|254780349|r 116 -MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLI-IVG-GTAYSRVWDWER 192 (433)
Q Consensus 116 -l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklI-i~G-~S~y~~~~d~~~ 192 (433)
T Consensus 90 y~~k~~h~it~~~ehk~vl~~~r--~le~~G~~vtyl~~~-~~G~~~~~~l~~~~~~~t-~lvs~m~vnne~G~~~~~~~ 165 (404)
T TIGR02006 90 YKSKGKHIITSKTEHKAVLDTCR--ELEREGFEVTYLEVK-EDGLIDLEELKAAIRDDT-ILVSVMAVNNEIGVIQDIAA 165 (404)
T ss_pred HHCCCCEEEEEEHHHHHHHHHHH--HHHHCCCEEEEEECC-CCCCEEHHHHHHHHHCCE-EEEEEEEECCCCCHHHHHHH
T ss_conf 74237667864003678999999--887578168985014-566210899998741270-57875531144330465889
Q ss_pred HHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCCCCCCC-EEEE-ECCCCHHHHCCHHHC-----H
Q ss_conf 9988641797899186201244320001232200--23567404565225674-4898-336205650166465-----4
Q gi|254780349|r 193 FRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSLRGPRG-GLIM-TNHADLAKKINSAIF-----P 263 (433)
Q Consensus 193 l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl~GPrg-GiI~-~~~~e~~~~i~~avf-----P 263 (433)
T Consensus 166 i~~~~r~~~~~fh~d~~q~~Gk~~~-----~~~~~~~dl~s~s~hk~y-GPkGiGalyv~~~P--rvr~~~~~~GGG~er 237 (404)
T TIGR02006 166 IGELCRERKVLFHVDAAQSVGKIPI-----DVEELKVDLMSISGHKIY-GPKGIGALYVRRKP--RVRLEALIHGGGHER 237 (404)
T ss_pred HHHHHHHCCEEEEEECCCCCCCEEE-----EHHHHHHHHHHHCCCCCC-CCCCCCEEEEECCC--CEEEEEECCCCCCCC
T ss_conf 9987630441476400013451134-----353431012100123102-67552124551277--335520004887435
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE--CCCCCCCCHHHHHH
Q ss_conf 322-344556668999999997356489999999988899999986168523345888981263--16655676799999
Q gi|254780349|r 264 GLQ-GGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLV--DLRSKRMTGKRAES 340 (433)
Q Consensus 264 g~q-g~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlv--dl~~~~~~G~~a~~ 340 (433)
T Consensus 238 G~r~Gtl~~~~ivG~G~~~~~a~~-~~~~~~~~~~~l~~~~~~~~~~~-~~~~~n~~~~~~~~~~ln~sf~~veGesl~~ 315 (404)
T TIGR02006 238 GMRSGTLPTHQIVGLGEAFRIAKE-ELAKDTARVLKLRDRLLNGIESI-EEVYLNGDLEQRVKGNLNVSFNYVEGESLIM 315 (404)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCHHHHHHHHHHEEEEEEECHHHHHH
T ss_conf 410244320143210167899999-99888999999999999987445-6533121144311222101222002047888
Q ss_pred HHHHCCEEEECCCCCCC-----------CCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 88856718803789989-----------99988898512246667307999899999999999996
Q gi|254780349|r 341 ILGRVSITCNKNSIPFD-----------PESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 341 ~Le~~gI~~Nkn~iP~D-----------~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
T Consensus 316 a~~~~avssGsaCts~slePsyvlr~lG~~~elah~s~r~~~Gr~tt----~~e~~~~~~~v~~~~ 377 (404)
T TIGR02006 316 ALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFTLGRFTT----EEEIDYAVKLVKSAV 377 (404)
T ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCH----HHHHHHHHHHHHHHH
T ss_conf 88887530564100133535578876064201223222100111210----789999999999999