HHsearch alignment for GI: 254780349 and conserved domain: cd00609

>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.71  E-value=4e-14  Score=118.84  Aligned_cols=297  Identities=19%  Similarity=0.210  Sum_probs=192.1

Q ss_pred             HHHHHHHHHHHHHHHCC--CCCEECCCHHH-HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99999999999998718--86301000016-7999999998315487488123344841114766543333322013665
Q gi|254780349|r   77 VDDIENIAIERAKKLFN--VNFVNVQSHSG-SQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNV  153 (433)
Q Consensus        77 ~d~iE~la~~~a~~lF~--a~~anvqp~SG-~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~  153 (433)
T Consensus        38 ~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~-----~~~g~~~~~v~~  112 (350)
T cd00609          38 LPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAA-----RLAGAEVVPVPL  112 (350)
T ss_pred             CHHHHHHHHHHHHHHHCCCCCHHHEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH-----HHCCCCCCCCCC
T ss_conf             199999999998787389974797899269999999999998089898999479863069999-----982994125565


Q ss_pred             CCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCC---CHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCC-
Q ss_conf             83235659899999998604667897055243--536---379999886417978991862012443200012322002-
Q gi|254780349|r  154 RKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVW---DWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHC-  227 (433)
Q Consensus       154 d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~---d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~A-  227 (433)
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~  191 (350)
T cd00609         113 DEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYA-ELVYDGEPPPALALLD  191 (350)
T ss_pred             CCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCH-HHCCCCCCCCHHHHCC
T ss_conf             600386766899998568899789856994972546337889899999862386268853412-2036998889678557


Q ss_pred             ----CEEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf             ----35674045652--256744898336205650166465432234455666899999999735648999999998889
Q gi|254780349|r  228 ----HIVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQ  301 (433)
Q Consensus       228 ----Dvvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~  301 (433)
T Consensus       192 ~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~  269 (350)
T cd00609         192 AYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLL-PYTTSGPSTLSQAAAAAALDD-GEEHLEELRERYRRRRD  269 (350)
T ss_pred             CCCEEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHH
T ss_conf             7980899911723037945377999988899999998624-214678987999999999868-29999999999999999


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCH
Q ss_conf             99999861685233458889812631665567679999988856718803789989999888985122466673079998
Q gi|254780349|r  302 ALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKE  381 (433)
Q Consensus       302 ~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e  381 (433)
T Consensus       270 ~l~~~l~~~~~~~~~~p~~g~f~~~~~~~-~~~~~~~~~~l~~~gv~v~~----g~~f~~~~~~~iRl~~~~------~~  338 (350)
T cd00609         270 ALLEALKELGPLVVVKPSGGFFLWLDLPE-GDDEEFLERLLLEAGVVVRP----GSAFGEGGEGFVRLSFAT------PE  338 (350)
T ss_pred             HHHHHHHHCCCCEEECCCCCEEEEEECCC-CCHHHHHHHHHHHCCEEEEE----CHHHCCCCCCEEEEEECC------CH
T ss_conf             99999985799612079955399898999-98299999999979999992----456488998979999639------89


Q ss_pred             HHHHHHHHHHH
Q ss_conf             99999999999
Q gi|254780349|r  382 KDFEYIGELIA  392 (433)
Q Consensus       382 ~em~~iA~li~  392 (433)
T Consensus       339 ~~~~~~~~rl~  349 (350)
T cd00609         339 EELEEALERLA  349 (350)
T ss_pred             HHHHHHHHHHC
T ss_conf             99999999857