HHsearch alignment for GI: 254780349 and conserved domain: cd00609
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.71 E-value=4e-14 Score=118.84 Aligned_cols=297 Identities=19% Similarity=0.210 Sum_probs=192.1
Q ss_pred HHHHHHHHHHHHHHHCC--CCCEECCCHHH-HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999999998718--86301000016-7999999998315487488123344841114766543333322013665
Q gi|254780349|r 77 VDDIENIAIERAKKLFN--VNFVNVQSHSG-SQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNV 153 (433)
Q Consensus 77 ~d~iE~la~~~a~~lF~--a~~anvqp~SG-~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~ 153 (433)
T Consensus 38 ~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~-----~~~g~~~~~v~~ 112 (350)
T cd00609 38 LPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAA-----RLAGAEVVPVPL 112 (350)
T ss_pred CHHHHHHHHHHHHHHHCCCCCHHHEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH-----HHCCCCCCCCCC
T ss_conf 199999999998787389974797899269999999999998089898999479863069999-----982994125565
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCC---CHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCC-
Q ss_conf 83235659899999998604667897055243--536---379999886417978991862012443200012322002-
Q gi|254780349|r 154 RKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVW---DWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHC- 227 (433)
Q Consensus 154 d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~---d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~A- 227 (433)
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~ 191 (350)
T cd00609 113 DEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYA-ELVYDGEPPPALALLD 191 (350)
T ss_pred CCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCH-HHCCCCCCCCHHHHCC
T ss_conf 600386766899998568899789856994972546337889899999862386268853412-2036998889678557
Q ss_pred ----CEEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf ----35674045652--256744898336205650166465432234455666899999999735648999999998889
Q gi|254780349|r 228 ----HIVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQ 301 (433)
Q Consensus 228 ----Dvvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~ 301 (433)
T Consensus 192 ~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~ 269 (350)
T cd00609 192 AYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLL-PYTTSGPSTLSQAAAAAALDD-GEEHLEELRERYRRRRD 269 (350)
T ss_pred CCCEEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHH
T ss_conf 7980899911723037945377999988899999998624-214678987999999999868-29999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCH
Q ss_conf 99999861685233458889812631665567679999988856718803789989999888985122466673079998
Q gi|254780349|r 302 ALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKE 381 (433)
Q Consensus 302 ~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e 381 (433)
T Consensus 270 ~l~~~l~~~~~~~~~~p~~g~f~~~~~~~-~~~~~~~~~~l~~~gv~v~~----g~~f~~~~~~~iRl~~~~------~~ 338 (350)
T cd00609 270 ALLEALKELGPLVVVKPSGGFFLWLDLPE-GDDEEFLERLLLEAGVVVRP----GSAFGEGGEGFVRLSFAT------PE 338 (350)
T ss_pred HHHHHHHHCCCCEEECCCCCEEEEEECCC-CCHHHHHHHHHHHCCEEEEE----CHHHCCCCCCEEEEEECC------CH
T ss_conf 99999985799612079955399898999-98299999999979999992----456488998979999639------89
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254780349|r 382 KDFEYIGELIA 392 (433)
Q Consensus 382 ~em~~iA~li~ 392 (433)
T Consensus 339 ~~~~~~~~rl~ 349 (350)
T cd00609 339 EELEEALERLA 349 (350)
T ss_pred HHHHHHHHHHC
T ss_conf 99999999857