HHsearch alignment for GI: 254780349 and conserved domain: cd00615
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.75 E-value=1.3e-16 Score=136.22 Aligned_cols=223 Identities=19% Similarity=0.175 Sum_probs=167.9
Q ss_pred HHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CC
Q ss_conf 999999987188630100001679999999983154874881233448411147665433333220136658323---56
Q gi|254780349|r 83 IAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED---GL 159 (433)
Q Consensus 83 la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~---~~ 159 (433)
T Consensus 63 eAq~laA~~~ga~~s~flvnGsT~g~~a~i~a~~~~gd~vlv~---RN~HkSv~~gl~l~g~~Pvyl~p~~~~~~gi~~~ 139 (294)
T cd00615 63 EAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCGPGDKILID---RNCHKSVINGLVLSGAVPVYLKPERNPYYGIAGG 139 (294)
T ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEE---CCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC
T ss_conf 9999999983999669982772699999999832899989982---6518999999998698489960643555695389
Q ss_pred CCHHHHHHHHHHH-CCCEEEE-ECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCC-CCCCC-CCEEEECCC
Q ss_conf 5989999999860-4667897-055243536379999886417978991862012443200012-32200-235674045
Q gi|254780349|r 160 LDMHEIESLAIEY-NPKLIIV-GGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHP-SPVPH-CHIVTTTTH 235 (433)
Q Consensus 160 ID~d~~~~~a~~~-kPklIi~-G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~-~Pl~~-ADvvt~sTH 235 (433)
T Consensus 140 i~~~~~~~al~~~p~~kav~lt~PtY~G~~~Dl~~i~~~~h~~~~~llVDEAhGah~~F~~~lp~~a~~~GAD~vv~S~H 219 (294)
T cd00615 140 IPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGADIVVQSTH 219 (294)
T ss_pred CCHHHHHHHHHHCCCCCEEEEECCCCCEEEECHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCCCHHHCCCEEEEECHH
T ss_conf 99999999998589965899977998877668999999984049979997754034431877875566669639996232
Q ss_pred CCCCCC-CCEEEEECCC-CHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 652256-7448983362-0565016646543223445566689999999973564899999999888999999861
Q gi|254780349|r 236 KSLRGP-RGGLIMTNHA-DLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQF 309 (433)
Q Consensus 236 Ktl~GP-rgGiI~~~~~-e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~ 309 (433)
T Consensus 220 KtL~altQ~s~lh~~~~~v~~~~l~~~l~~~qTTSPSYllmASlD~ar~~~-~~~G~~l~~~~l~~a~~~R~~i~~ 294 (294)
T cd00615 220 KTLPALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMM-ALEGKELVEELIELALYARQEINK 294 (294)
T ss_pred HCCCCCCHHHHEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 145332225320237996899999999998838875899999999999999-999999999999999999999659