Query gi|254780349|ref|YP_003064762.1| serine hydroxymethyltransferase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 433
No_of_seqs 170 out of 2063
Neff 5.4
Searched_HMMs 39220
Date Sun May 29 15:38:28 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780349.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK13034 serine hydroxymethylt 100.0 0 0 1196.1 39.2 418 7-425 5-422 (422)
2 COG0112 GlyA Glycine/serine hy 100.0 0 0 1197.1 38.2 410 11-426 4-413 (413)
3 PRK13580 serine hydroxymethylt 100.0 0 0 1171.5 40.2 416 12-429 30-492 (493)
4 PRK00011 glyA serine hydroxyme 100.0 0 0 1169.1 39.5 414 10-428 2-415 (415)
5 PTZ00094 serine hydroxymethylt 100.0 0 0 1156.9 39.5 416 11-428 9-450 (450)
6 cd00378 SHMT Serine-glycine hy 100.0 0 0 1123.7 38.2 399 16-418 2-402 (402)
7 pfam00464 SHMT Serine hydroxym 100.0 0 0 1117.2 35.0 378 14-391 1-380 (380)
8 KOG2467 consensus 100.0 0 0 1057.1 31.1 425 3-428 10-476 (477)
9 cd06454 KBL_like KBL_like; thi 99.9 1.6E-22 4.1E-27 177.3 24.9 319 46-394 17-348 (349)
10 PRK05958 8-amino-7-oxononanoat 99.9 8.5E-20 2.2E-24 158.3 23.8 327 38-396 43-385 (387)
11 PRK13392 5-aminolevulinate syn 99.9 1.2E-19 3.2E-24 157.2 24.4 354 4-399 2-399 (410)
12 cd06451 AGAT_like Alanine-glyo 99.9 8.9E-19 2.3E-23 151.2 28.1 326 37-396 2-356 (356)
13 pfam00266 Aminotran_5 Aminotra 99.9 5E-20 1.3E-24 159.9 21.5 319 40-376 6-364 (371)
14 PRK13393 5-aminolevulinate syn 99.9 4.8E-19 1.2E-23 153.1 24.8 328 36-397 47-396 (404)
15 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 1.8E-19 4.5E-24 156.1 20.8 317 41-395 9-360 (361)
16 PRK02948 cysteine desulfurase; 99.9 8.5E-19 2.2E-23 151.3 23.6 331 40-395 7-372 (381)
17 PRK07179 hypothetical protein; 99.9 1.3E-18 3.3E-23 150.1 23.9 330 33-397 54-399 (408)
18 TIGR03588 PseC UDP-4-keto-6-de 99.9 3.1E-19 7.8E-24 154.4 20.7 307 74-395 28-380 (380)
19 PRK10874 cysteine sulfinate de 99.9 5E-18 1.3E-22 146.0 25.7 337 39-396 25-397 (401)
20 PRK06939 2-amino-3-ketobutyrat 99.8 3.2E-18 8.3E-23 147.3 23.6 323 38-396 46-392 (395)
21 PRK09064 5-aminolevulinate syn 99.8 3.3E-18 8.4E-23 147.3 22.5 328 35-397 46-396 (406)
22 TIGR03402 FeS_nifS cysteine de 99.8 4E-18 1E-22 146.6 22.2 333 40-396 6-371 (379)
23 cd06502 TA_like Low-specificit 99.8 9.5E-18 2.4E-22 144.1 23.9 308 44-393 9-337 (338)
24 PRK07505 hypothetical protein; 99.8 4.1E-17 1E-21 139.7 25.9 325 38-396 53-401 (405)
25 PRK09295 selenocysteine lyase; 99.8 2.5E-17 6.3E-22 141.2 24.4 335 40-395 30-402 (406)
26 TIGR03392 FeS_syn_CsdA cystein 99.8 4.7E-17 1.2E-21 139.2 25.8 337 39-397 22-395 (398)
27 PRK11658 UDP-4-amino-4-deoxy-L 99.8 9.4E-18 2.4E-22 144.1 22.0 279 47-357 18-328 (379)
28 cd06453 SufS_like Cysteine des 99.8 1.2E-17 3.1E-22 143.3 21.9 329 40-389 6-371 (373)
29 pfam01276 OKR_DC_1 Orn/Lys/Arg 99.8 4.4E-18 1.1E-22 146.4 19.1 268 81-352 68-400 (417)
30 cd01494 AAT_I Aspartate aminot 99.8 2.8E-19 7.1E-24 154.7 12.5 161 84-249 5-170 (170)
31 COG0520 csdA Selenocysteine ly 99.8 5.7E-17 1.4E-21 138.7 24.1 335 43-395 32-403 (405)
32 TIGR03403 nifS_epsilon cystein 99.8 6.7E-17 1.7E-21 138.2 24.0 332 40-396 6-374 (382)
33 cd00616 AHBA_syn 3-amino-5-hyd 99.8 1.3E-17 3.4E-22 143.1 20.4 264 75-356 18-303 (352)
34 pfam01041 DegT_DnrJ_EryC1 DegT 99.8 1.5E-17 3.8E-22 142.7 20.2 259 74-351 24-308 (363)
35 COG0399 WecE Predicted pyridox 99.8 7.1E-17 1.8E-21 138.0 22.5 304 74-396 33-372 (374)
36 TIGR00858 bioF 8-amino-7-oxono 99.8 1.1E-16 2.9E-21 136.6 20.9 316 39-391 28-377 (378)
37 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 1.9E-16 4.9E-21 135.0 21.7 262 75-356 31-323 (375)
38 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 1.1E-15 2.8E-20 129.7 25.4 326 36-395 1-355 (355)
39 pfam00155 Aminotran_1_2 Aminot 99.8 2.4E-16 6E-21 134.4 21.4 329 34-389 2-349 (351)
40 PRK06220 consensus 99.8 1.8E-15 4.7E-20 128.2 25.5 357 8-395 2-378 (384)
41 PRK13479 2-aminoethylphosphona 99.8 1.5E-15 3.7E-20 128.9 24.6 329 32-397 3-363 (368)
42 TIGR03235 DNA_S_dndA cysteine 99.8 5.7E-16 1.5E-20 131.7 22.5 316 40-384 5-346 (354)
43 PRK10534 L-threonine aldolase; 99.8 2E-15 5E-20 127.9 25.1 313 40-396 5-332 (333)
44 COG0075 Serine-pyruvate aminot 99.8 6E-15 1.5E-19 124.6 26.8 333 35-400 6-366 (383)
45 pfam01212 Beta_elim_lyase Beta 99.8 5E-16 1.3E-20 132.1 20.2 264 40-328 3-287 (288)
46 COG0156 BioF 7-keto-8-aminopel 99.8 1.5E-15 3.8E-20 128.8 21.8 321 39-394 44-387 (388)
47 cd00615 Orn_deC_like Ornithine 99.8 1.3E-16 3.2E-21 136.2 16.0 223 83-309 63-294 (294)
48 PRK05937 8-amino-7-oxononanoat 99.7 3.3E-15 8.3E-20 126.4 23.1 326 40-407 10-360 (370)
49 COG0076 GadB Glutamate decarbo 99.7 9E-16 2.3E-20 130.3 20.1 327 13-353 39-404 (460)
50 PRK08912 hypothetical protein; 99.7 5.3E-15 1.4E-19 124.9 24.0 354 10-397 4-386 (387)
51 PRK08443 consensus 99.7 4.5E-15 1.1E-19 125.5 23.2 360 9-396 1-385 (388)
52 PRK13520 L-tyrosine decarboxyl 99.7 8.2E-16 2.1E-20 130.6 19.1 332 20-379 10-361 (375)
53 COG1982 LdcC Arginine/lysine/o 99.7 1.4E-15 3.5E-20 129.0 20.0 267 83-353 74-376 (557)
54 PRK08045 cystathionine gamma-s 99.7 7.8E-16 2E-20 130.8 17.4 246 73-347 50-320 (386)
55 PRK09276 aspartate aminotransf 99.7 1.9E-14 4.9E-19 121.1 24.4 355 10-392 4-383 (385)
56 PRK08362 consensus 99.7 2.2E-14 5.5E-19 120.7 24.4 359 11-397 4-385 (389)
57 PRK05764 aspartate aminotransf 99.7 6.5E-14 1.7E-18 117.4 26.1 354 11-396 5-386 (389)
58 PRK07212 consensus 99.7 6.4E-14 1.6E-18 117.4 25.9 351 10-395 4-377 (378)
59 PRK07778 consensus 99.7 7.4E-14 1.9E-18 117.0 25.8 347 21-396 15-385 (386)
60 PRK06108 aspartate aminotransf 99.7 9.9E-15 2.5E-19 123.0 20.7 334 32-395 23-380 (382)
61 PRK08361 aspartate aminotransf 99.7 3.8E-14 9.8E-19 119.0 23.5 362 8-396 7-388 (390)
62 PRK09331 Sep-tRNA:Cys-tRNA syn 99.7 5.2E-15 1.3E-19 125.0 18.9 327 31-396 15-379 (386)
63 cd00609 AAT_like Aspartate ami 99.7 4E-14 1E-18 118.8 23.4 297 77-392 38-349 (350)
64 PRK08960 hypothetical protein; 99.7 1.6E-13 4.1E-18 114.6 26.3 361 10-396 5-386 (387)
65 PRK08776 cystathionine gamma-s 99.7 1.2E-15 3.1E-20 129.4 15.0 247 72-348 57-329 (405)
66 COG2008 GLY1 Threonine aldolas 99.7 1.9E-14 4.7E-19 121.2 20.8 311 40-395 5-341 (342)
67 PRK04870 histidinol-phosphate 99.7 1.6E-13 4E-18 114.7 25.4 317 33-395 26-356 (356)
68 PRK05957 aspartate aminotransf 99.7 1.1E-13 2.9E-18 115.7 24.5 354 10-395 4-383 (389)
69 PRK07683 aminotransferase A; V 99.7 8.9E-14 2.3E-18 116.4 23.9 360 8-396 3-382 (387)
70 PRK07550 hypothetical protein; 99.7 5E-14 1.3E-18 118.2 22.6 326 21-371 17-367 (387)
71 PRK05166 histidinol-phosphate 99.7 4.2E-14 1.1E-18 118.7 22.2 345 8-396 10-372 (374)
72 PRK08574 cystathionine gamma-s 99.7 4.1E-15 1E-19 125.7 17.0 248 73-348 51-322 (384)
73 TIGR03540 DapC_direct LL-diami 99.7 4E-14 1E-18 118.9 21.9 339 11-371 3-366 (383)
74 PRK06348 aspartate aminotransf 99.7 1.5E-13 3.9E-18 114.8 24.7 355 7-393 3-381 (383)
75 PRK06460 hypothetical protein; 99.7 3E-15 7.6E-20 126.7 15.6 246 73-348 43-313 (375)
76 PRK07309 aromatic amino acid a 99.7 1.3E-13 3.2E-18 115.4 23.7 363 7-396 4-387 (390)
77 cd00617 Tnase_like Tryptophana 99.7 5.2E-14 1.3E-18 118.0 21.7 320 66-397 44-408 (431)
78 PRK09082 putative aminotransfe 99.7 1.3E-13 3.2E-18 115.4 23.5 334 11-371 9-369 (386)
79 PRK06176 cystathionine gamma-s 99.7 1.8E-14 4.5E-19 121.3 19.1 246 73-348 48-317 (379)
80 PRK07681 aspartate aminotransf 99.7 2.3E-13 5.7E-18 113.6 24.6 352 10-394 5-385 (399)
81 PRK07504 O-succinylhomoserine 99.7 2.6E-15 6.6E-20 127.1 14.6 280 35-347 29-333 (397)
82 PRK07682 hypothetical protein; 99.7 5.2E-14 1.3E-18 118.0 21.0 335 33-396 20-375 (378)
83 PRK02731 histidinol-phosphate 99.7 1.8E-13 4.7E-18 114.2 23.7 320 33-396 32-365 (367)
84 PRK08363 alanine aminotransfer 99.7 1.6E-13 4.1E-18 114.6 23.2 345 20-395 14-392 (398)
85 PRK05968 hypothetical protein; 99.7 1.2E-14 3.1E-19 122.5 17.2 278 37-349 29-326 (389)
86 cd00614 CGS_like CGS_like: Cys 99.7 5.7E-15 1.5E-19 124.7 15.5 250 73-349 38-310 (369)
87 PRK08068 transaminase; Reviewe 99.7 4.7E-13 1.2E-17 111.4 25.2 344 11-393 6-385 (389)
88 PRK07811 cystathionine gamma-s 99.7 7.4E-15 1.9E-19 123.9 15.3 213 73-311 56-276 (386)
89 PRK07050 cystathionine beta-ly 99.7 3.6E-15 9.2E-20 126.1 13.7 246 37-311 31-283 (394)
90 PRK05942 aspartate aminotransf 99.7 5.2E-13 1.3E-17 111.1 24.6 356 11-395 9-390 (394)
91 PRK07777 aminotransferase; Val 99.7 2E-13 5.1E-18 114.0 22.5 316 30-372 21-367 (386)
92 PRK03317 histidinol-phosphate 99.7 4.9E-13 1.2E-17 111.3 24.1 317 35-397 28-365 (369)
93 PRK07310 consensus 99.7 1.4E-12 3.5E-17 108.2 26.2 358 11-397 4-392 (395)
94 PRK07671 cystathionine beta-ly 99.7 2.1E-14 5.3E-19 120.8 16.9 246 73-349 48-318 (377)
95 PRK08861 cystathionine gamma-s 99.7 8.3E-15 2.1E-19 123.6 14.7 241 85-350 59-324 (388)
96 PRK03566 consensus 99.7 4E-13 1E-17 111.9 23.3 318 33-396 32-363 (365)
97 PRK06234 methionine gamma-lyas 99.6 2.2E-14 5.6E-19 120.7 16.4 308 1-349 1-336 (399)
98 PRK08636 aspartate aminotransf 99.6 1.5E-12 3.9E-17 107.8 25.8 355 13-396 9-399 (403)
99 TIGR01977 am_tr_V_EF2568 cyste 99.6 1.6E-13 4E-18 114.7 20.7 331 41-392 7-382 (384)
100 PRK07324 transaminase; Validat 99.6 1E-13 2.6E-18 116.0 19.6 276 93-396 77-369 (373)
101 PRK07366 succinyldiaminopimela 99.6 4.9E-13 1.2E-17 111.3 23.1 336 10-371 3-370 (388)
102 PRK08249 cystathionine gamma-s 99.6 9.2E-14 2.3E-18 116.3 19.2 306 1-348 1-332 (398)
103 PRK00950 histidinol-phosphate 99.6 3.7E-13 9.4E-18 112.1 22.2 324 32-396 34-369 (369)
104 PRK07503 methionine gamma-lyas 99.6 1E-14 2.6E-19 123.0 14.2 283 37-349 31-336 (403)
105 PRK08175 aminotransferase; Val 99.6 2.6E-12 6.6E-17 106.2 26.5 352 14-397 6-389 (395)
106 PRK07337 aminotransferase; Val 99.6 3E-13 7.6E-18 112.8 21.4 339 12-372 5-370 (388)
107 PRK13237 tyrosine phenol-lyase 99.6 3E-13 7.8E-18 112.7 21.3 313 66-398 69-434 (459)
108 PRK07810 O-succinylhomoserine 99.6 2.8E-14 7E-19 120.0 16.0 335 36-411 38-401 (406)
109 PRK13578 ornithine decarboxyla 99.6 9.3E-13 2.4E-17 109.3 23.8 332 42-392 105-560 (720)
110 PRK08114 cystathionine beta-ly 99.6 6.1E-14 1.5E-18 117.6 17.5 251 73-350 60-336 (395)
111 PRK09028 cystathionine beta-ly 99.6 2.2E-14 5.5E-19 120.7 15.1 214 73-312 59-279 (394)
112 PRK02769 histidine decarboxyla 99.6 6E-13 1.5E-17 110.7 22.3 287 15-316 4-317 (380)
113 pfam01053 Cys_Met_Meta_PP Cys/ 99.6 2.7E-14 6.9E-19 120.0 15.4 247 73-348 50-321 (381)
114 PRK06225 aspartate aminotransf 99.6 3.1E-13 7.8E-18 112.7 20.5 333 27-396 16-370 (375)
115 PRK05613 O-acetylhomoserine am 99.6 7.9E-14 2E-18 116.8 17.5 220 73-311 67-323 (437)
116 PRK07582 cystathionine gamma-l 99.6 2.5E-14 6.3E-19 120.3 14.8 246 73-349 51-319 (370)
117 PRK07367 consensus 99.6 2.8E-12 7.1E-17 106.0 25.2 353 12-396 3-383 (385)
118 PRK08133 O-succinylhomoserine 99.6 2E-14 5.1E-19 120.9 14.2 247 36-311 26-279 (391)
119 PRK08064 cystathionine beta-ly 99.6 1.7E-13 4.3E-18 114.5 18.9 247 73-348 52-321 (390)
120 PRK06107 aspartate aminotransf 99.6 2.5E-12 6.4E-17 106.3 24.7 361 1-396 1-399 (402)
121 PRK06767 methionine gamma-lyas 99.6 1.6E-14 4.2E-19 121.5 13.4 275 37-348 27-324 (386)
122 PRK07812 O-acetylhomoserine am 99.6 1.1E-13 2.8E-18 115.8 17.5 258 37-320 35-329 (436)
123 PRK05967 cystathionine beta-ly 99.6 5.5E-14 1.4E-18 117.9 15.6 247 73-347 62-332 (392)
124 PRK03321 putative aminotransfe 99.6 1.9E-12 4.9E-17 107.1 23.2 314 33-395 22-349 (352)
125 PRK00451 glycine dehydrogenase 99.6 1.3E-12 3.4E-17 108.2 22.4 294 85-395 118-448 (449)
126 COG0436 Aspartate/tyrosine/aro 99.6 3.4E-12 8.7E-17 105.4 23.9 334 33-395 28-389 (393)
127 PRK06507 consensus 99.6 3.9E-12 1E-16 105.0 24.2 355 10-392 4-397 (400)
128 PRK06056 consensus 99.6 1.3E-11 3.3E-16 101.4 26.6 351 10-396 7-399 (402)
129 PRK04366 glycine dehydrogenase 99.6 7.4E-13 1.9E-17 110.0 20.1 291 85-397 121-451 (490)
130 PRK06702 O-acetylhomoserine am 99.6 2.9E-13 7.3E-18 112.9 17.9 250 37-311 27-311 (432)
131 PRK08248 O-acetylhomoserine am 99.6 1.3E-13 3.2E-18 115.3 16.1 263 36-322 29-327 (431)
132 PRK06375 consensus 99.6 1.2E-12 3.1E-17 108.5 20.9 350 11-396 3-379 (381)
133 PRK08069 consensus 99.6 7.2E-12 1.8E-16 103.2 24.7 354 11-395 4-389 (390)
134 PRK08247 cystathionine gamma-s 99.6 1.1E-13 2.8E-18 115.8 14.9 245 73-347 50-302 (366)
135 PRK05794 consensus 99.6 4E-12 1E-16 104.9 22.9 355 11-396 4-394 (397)
136 PRK08134 O-acetylhomoserine am 99.6 2.2E-13 5.5E-18 113.7 16.2 286 36-348 29-366 (433)
137 PRK03158 histidinol-phosphate 99.6 4.4E-12 1.1E-16 104.6 22.7 317 33-395 29-359 (359)
138 TIGR03537 DapC succinyldiamino 99.6 1.7E-12 4.3E-17 107.6 20.5 270 81-371 43-333 (350)
139 COG0626 MetC Cystathionine bet 99.6 1.1E-13 2.8E-18 115.8 14.4 249 73-349 61-334 (396)
140 PRK06290 aspartate aminotransf 99.6 1.6E-11 4E-16 100.8 25.4 342 20-395 25-400 (411)
141 PRK07049 methionine gamma-lyas 99.6 2.8E-13 7.2E-18 112.9 16.4 250 37-311 39-312 (427)
142 PRK07543 consensus 99.6 5.7E-12 1.5E-16 103.8 22.9 339 9-372 3-379 (400)
143 PRK12414 putative aminotransfe 99.6 1.8E-12 4.7E-17 107.3 20.4 331 14-372 11-368 (384)
144 PRK08153 histidinol-phosphate 99.6 5.8E-12 1.5E-16 103.8 22.4 319 35-397 35-366 (370)
145 PRK05939 hypothetical protein; 99.6 2.7E-13 6.9E-18 113.1 15.5 250 73-349 44-335 (396)
146 PRK09105 putative aminotransfe 99.6 5.9E-12 1.5E-16 103.8 22.3 311 33-397 46-373 (374)
147 COG1104 NifS Cysteine sulfinat 99.6 3.4E-12 8.6E-17 105.4 20.1 336 40-396 8-376 (386)
148 PRK06207 aspartate aminotransf 99.6 2E-11 5E-16 100.1 23.7 293 77-395 80-401 (406)
149 PRK04152 consensus 99.5 1.1E-11 2.8E-16 101.9 22.3 316 32-395 30-364 (364)
150 PRK07269 cystathionine gamma-s 99.5 3E-13 7.6E-18 112.8 14.2 244 73-349 52-304 (364)
151 PRK06434 cystathionine gamma-l 99.5 1E-12 2.7E-17 109.0 16.4 278 36-350 29-325 (384)
152 PRK05994 O-acetylhomoserine am 99.5 3.5E-13 8.8E-18 112.3 13.8 250 37-311 29-313 (426)
153 PRK06084 O-acetylhomoserine am 99.5 6.1E-13 1.6E-17 110.6 15.0 250 37-311 24-309 (424)
154 PRK07590 L,L-diaminopimelate a 99.5 4.7E-11 1.2E-15 97.5 24.6 336 32-394 33-408 (409)
155 PRK01533 histidinol-phosphate 99.5 1.6E-11 4.1E-16 100.7 22.1 316 33-402 29-360 (366)
156 PRK06836 aspartate aminotransf 99.5 2.5E-11 6.2E-16 99.4 22.9 331 32-395 33-390 (396)
157 PRK13238 tnaA tryptophanase; P 99.5 3.2E-11 8.2E-16 98.6 23.4 314 67-397 70-434 (461)
158 PRK07568 aspartate aminotransf 99.5 7.9E-11 2E-15 95.9 25.3 348 12-396 5-391 (396)
159 PRK09148 aminotransferase; Val 99.5 5.3E-11 1.3E-15 97.1 23.2 357 13-397 7-391 (406)
160 KOG0053 consensus 99.5 1.7E-12 4.3E-17 107.5 15.1 220 62-310 58-294 (409)
161 PRK02610 histidinol-phosphate 99.5 8.1E-11 2.1E-15 95.8 23.5 323 33-396 25-367 (369)
162 cd06450 DOPA_deC_like DOPA dec 99.5 1.6E-11 4.2E-16 100.7 19.9 279 76-393 35-344 (345)
163 TIGR01822 2am3keto_CoA 2-amino 99.5 1.1E-12 2.9E-17 108.7 13.7 315 33-375 40-373 (395)
164 COG1168 MalY Bifunctional PLP- 99.5 1.5E-10 3.9E-15 93.9 24.5 306 34-353 26-352 (388)
165 PRK06575 consensus 99.5 3.8E-10 9.7E-15 91.2 26.5 357 9-396 3-397 (399)
166 pfam00282 Pyridoxal_deC Pyrido 99.5 5.4E-12 1.4E-16 104.0 16.2 235 76-316 76-358 (370)
167 PRK09147 aminotransferase; Pro 99.5 3.1E-10 7.8E-15 91.8 23.6 352 11-396 2-396 (397)
168 COG1003 GcvP Glycine cleavage 99.4 3.7E-11 9.4E-16 98.2 18.5 294 40-349 58-408 (496)
169 KOG2862 consensus 99.4 4.4E-10 1.1E-14 90.8 24.0 328 37-397 20-382 (385)
170 PRK05387 histidinol-phosphate 99.4 5.1E-10 1.3E-14 90.3 23.9 314 32-396 23-352 (353)
171 cd00613 GDC-P Glycine cleavage 99.4 2.9E-11 7.4E-16 98.9 17.3 318 46-389 34-396 (398)
172 TIGR01821 5aminolev_synth 5-am 99.4 1.8E-11 4.6E-16 100.4 16.0 318 45-396 61-420 (427)
173 TIGR01141 hisC histidinol-phos 99.4 9.9E-11 2.5E-15 95.2 19.1 306 33-374 28-366 (377)
174 TIGR01325 O_suc_HS_sulf O-succ 99.4 7.1E-12 1.8E-16 103.2 13.1 273 64-379 45-350 (386)
175 KOG1549 consensus 99.4 7.6E-11 1.9E-15 96.0 18.4 330 40-396 50-417 (428)
176 PRK09265 aminotransferase AlaT 99.4 3.1E-10 7.8E-15 91.8 21.2 357 12-396 8-400 (404)
177 TIGR03542 DAPAT_plant LL-diami 99.4 2.2E-10 5.7E-15 92.8 20.3 331 33-395 33-402 (402)
178 PRK05367 glycine dehydrogenase 99.4 9.1E-11 2.3E-15 95.5 16.5 261 76-349 540-838 (955)
179 PRK01688 histidinol-phosphate 99.4 1.3E-09 3.2E-14 87.5 22.2 308 33-389 28-348 (355)
180 COG1167 ARO8 Transcriptional r 99.4 2E-09 5E-14 86.2 23.2 300 76-396 134-454 (459)
181 COG3033 TnaA Tryptophanase [Am 99.4 1.5E-09 3.9E-14 87.0 22.5 323 65-403 69-450 (471)
182 TIGR01825 gly_Cac_T_rel pyrido 99.4 1.2E-10 3E-15 94.7 16.7 313 33-378 33-373 (392)
183 PRK12566 glycine dehydrogenase 99.4 2.2E-10 5.5E-15 92.8 18.0 261 76-348 541-838 (954)
184 PRK04781 histidinol-phosphate 99.4 5.9E-10 1.5E-14 89.8 20.0 314 33-397 29-361 (362)
185 KOG1360 consensus 99.4 1.5E-10 3.8E-15 94.0 16.8 318 46-396 187-523 (570)
186 COG0079 HisC Histidinol-phosph 99.4 2.9E-09 7.5E-14 85.0 22.9 315 34-396 23-353 (356)
187 TIGR02080 O_succ_thio_ly O-suc 99.3 6.6E-12 1.7E-16 103.4 9.1 291 88-412 60-377 (383)
188 TIGR03538 DapC_gpp succinyldia 99.3 3.5E-09 8.9E-14 84.4 22.6 326 33-393 29-392 (394)
189 PRK06855 aminotransferase; Val 99.3 5.5E-09 1.4E-13 83.1 22.9 347 20-395 16-427 (433)
190 TIGR03576 pyridox_MJ0158 pyrid 99.3 1.1E-09 2.7E-14 88.1 19.2 265 84-389 59-334 (346)
191 PRK07392 threonine-phosphate d 99.3 3.5E-09 8.8E-14 84.5 21.8 319 32-397 21-357 (358)
192 PRK09257 aromatic amino acid a 99.3 4.5E-09 1.1E-13 83.7 20.9 332 34-396 27-397 (397)
193 TIGR03539 DapC_actino succinyl 99.3 5.7E-09 1.5E-13 83.0 20.6 307 21-371 9-342 (357)
194 PRK08637 hypothetical protein; 99.3 1.2E-08 3E-13 80.7 22.0 274 99-397 73-384 (386)
195 TIGR01979 sufS cysteine desulf 99.3 1.6E-09 4E-14 86.9 17.2 318 46-391 32-401 (409)
196 COG1921 SelA Selenocysteine sy 99.2 6.8E-09 1.7E-13 82.4 20.2 341 23-387 7-377 (395)
197 PRK08056 threonine-phosphate d 99.2 1.9E-08 4.8E-13 79.4 22.0 322 32-397 19-355 (356)
198 PRK06358 threonine-phosphate d 99.2 1.2E-08 3E-13 80.8 20.8 319 32-395 18-353 (354)
199 KOG1359 consensus 99.2 8.6E-10 2.2E-14 88.7 14.9 302 60-397 96-412 (417)
200 PRK03967 histidinol-phosphate 99.2 2.3E-08 5.8E-13 78.8 22.0 303 33-396 18-333 (337)
201 PRK03262 consensus 99.2 8E-09 2E-13 82.0 19.3 321 4-370 3-336 (355)
202 PRK07908 hypothetical protein; 99.2 1.3E-08 3.3E-13 80.5 19.8 318 31-396 19-345 (346)
203 PRK04635 histidinol-phosphate 99.2 2.7E-08 6.8E-13 78.3 21.4 305 33-392 24-342 (346)
204 KOG1368 consensus 99.2 4.3E-09 1.1E-13 83.8 16.2 284 62-372 43-347 (384)
205 TIGR01326 OAH_OAS_sulfhy O-ace 99.2 1.2E-10 3E-15 94.7 8.0 211 86-311 64-321 (434)
206 PRK13355 bifunctional HTH-doma 99.2 2E-08 5.1E-13 79.2 19.2 284 89-392 201-513 (518)
207 COG2873 MET17 O-acetylhomoseri 99.1 1.1E-09 2.7E-14 88.0 11.4 215 76-311 63-312 (426)
208 PRK07865 N-succinyldiaminopime 99.1 6.7E-08 1.7E-12 75.5 20.6 303 26-371 19-348 (364)
209 pfam06838 Alum_res Aluminium r 99.1 1.1E-08 2.7E-13 81.1 15.9 249 88-357 64-347 (405)
210 TIGR01328 met_gam_lyase methio 99.1 1.7E-09 4.4E-14 86.6 11.6 222 73-322 57-292 (392)
211 TIGR01976 am_tr_V_VC1184 cyste 99.1 1.9E-08 4.7E-13 79.4 16.7 326 44-392 32-408 (410)
212 PRK04311 selenocysteine syntha 99.1 8.1E-08 2.1E-12 75.0 19.8 314 45-396 100-464 (465)
213 TIGR01329 cysta_beta_ly_E cyst 99.1 3.7E-09 9.3E-14 84.3 12.8 216 73-314 47-285 (415)
214 KOG1357 consensus 99.1 9.7E-09 2.5E-13 81.4 13.8 294 60-376 166-485 (519)
215 COG1103 Archaea-specific pyrid 99.0 5.2E-08 1.3E-12 76.3 15.4 322 33-396 15-379 (382)
216 KOG0257 consensus 99.0 1.9E-07 4.9E-12 72.3 17.6 348 10-394 8-397 (420)
217 COG1448 TyrB Aspartate/tyrosin 99.0 1.3E-06 3.2E-11 66.7 21.8 313 42-395 42-396 (396)
218 pfam03841 SelA L-seryl-tRNA se 99.0 3.3E-07 8.4E-12 70.7 18.6 276 44-346 17-347 (367)
219 PRK05839 hypothetical protein; 99.0 4.5E-07 1.2E-11 69.8 19.2 299 32-371 23-354 (376)
220 PRK06425 histidinol-phosphate 99.0 3.7E-07 9.5E-12 70.3 18.7 273 86-395 47-331 (332)
221 PRK04073 rocD ornithine--oxo-a 99.0 1.1E-06 2.8E-11 67.1 20.8 283 85-396 88-396 (396)
222 PTZ00125 ornithine aminotransf 98.9 1.2E-06 3.1E-11 66.8 20.4 290 82-397 94-413 (415)
223 PRK06959 putative threonine-ph 98.9 5.8E-07 1.5E-11 69.0 18.7 300 33-397 24-333 (339)
224 PRK08593 4-aminobutyrate amino 98.9 2E-06 5E-11 65.3 21.4 295 81-401 91-436 (448)
225 PRK11522 putrescine--2-oxoglut 98.9 2.5E-06 6.4E-11 64.6 21.9 271 101-397 156-460 (468)
226 KOG2040 consensus 98.9 3.6E-07 9.2E-12 70.4 17.2 264 74-349 578-881 (1001)
227 TIGR02539 SepCysS Sep-tRNA:Cys 98.9 4.6E-08 1.2E-12 76.6 12.3 329 32-397 5-379 (381)
228 PRK09440 avtA valine--pyruvate 98.9 1.9E-06 4.8E-11 65.5 20.3 345 21-396 16-410 (416)
229 PRK05664 threonine-phosphate d 98.9 1.8E-06 4.6E-11 65.6 19.7 282 31-370 18-307 (330)
230 PRK06938 diaminobutyrate--2-ox 98.9 1.3E-05 3.3E-10 59.6 23.5 269 103-397 135-460 (464)
231 PRK05965 hypothetical protein; 98.9 2.8E-06 7.2E-11 64.2 20.1 296 81-400 93-450 (459)
232 PRK00854 rocD ornithine--oxo-a 98.8 5.6E-06 1.4E-10 62.2 21.0 284 80-396 88-403 (404)
233 PRK03244 argD acetylornithine 98.8 7.6E-06 1.9E-10 61.2 21.3 268 102-397 110-394 (398)
234 cd00610 OAT_like Acetyl ornith 98.8 2.5E-06 6.4E-11 64.6 18.5 290 82-395 82-413 (413)
235 pfam02347 GDC-P Glycine cleava 98.8 6.6E-07 1.7E-11 68.6 15.5 305 42-389 76-427 (429)
236 PRK12381 bifunctional succinyl 98.8 1.1E-05 2.9E-10 60.0 21.7 270 101-396 102-398 (406)
237 COG4992 ArgD Ornithine/acetylo 98.8 1.4E-05 3.5E-10 59.4 21.9 290 77-397 83-398 (404)
238 PRK05964 adenosylmethionine--8 98.8 3.1E-05 8E-10 57.0 22.8 289 79-396 86-419 (421)
239 PRK09264 diaminobutyrate--2-ox 98.7 1.2E-05 3E-10 59.9 20.2 265 102-397 110-416 (426)
240 TIGR03246 arg_catab_astC succi 98.7 1.6E-05 4.1E-10 59.0 20.9 270 101-396 98-394 (397)
241 TIGR02326 transamin_PhnW 2-ami 98.7 1.8E-05 4.5E-10 58.7 21.0 322 34-396 3-364 (366)
242 COG0403 GcvP Glycine cleavage 98.7 3.8E-05 9.8E-10 56.3 22.6 253 42-317 86-387 (450)
243 PRK02936 argD acetylornithine 98.7 1.2E-05 3.1E-10 59.8 19.4 258 102-395 93-377 (377)
244 PRK08354 putative aminotransfe 98.7 4.3E-05 1.1E-09 56.0 21.8 291 32-393 7-308 (312)
245 PRK13360 omega amino acid--pyr 98.7 2.7E-05 7E-10 57.4 20.5 266 101-397 111-439 (441)
246 PRK06917 hypothetical protein; 98.7 2.3E-05 5.9E-10 57.9 20.0 298 80-396 76-436 (447)
247 PRK04612 argD bifunctional N-s 98.7 3.5E-05 8.8E-10 56.6 20.8 270 102-397 105-403 (408)
248 TIGR01265 tyr_nico_aTase tyros 98.7 1.4E-06 3.6E-11 66.3 13.5 300 45-370 60-401 (424)
249 KOG1383 consensus 98.7 5.2E-06 1.3E-10 62.4 16.4 269 78-353 119-414 (491)
250 PRK08466 consensus 98.7 2.9E-05 7.4E-10 57.2 20.2 288 81-396 92-427 (430)
251 PRK08117 4-aminobutyrate amino 98.6 8.3E-05 2.1E-09 54.0 24.8 272 102-396 108-426 (429)
252 PRK09044 consensus 98.6 8.7E-05 2.2E-09 53.9 22.0 283 81-396 88-416 (418)
253 PRK04260 acetylornithine amino 98.6 2.3E-05 5.9E-10 57.9 18.8 265 101-394 90-374 (375)
254 PRK06173 adenosylmethionine--8 98.6 4.9E-05 1.2E-09 55.6 20.2 267 101-397 110-425 (429)
255 PRK07986 adenosylmethionine--8 98.6 0.0001 2.7E-09 53.3 22.6 270 101-397 109-423 (428)
256 PRK06062 hypothetical protein; 98.6 1.4E-05 3.5E-10 59.4 17.1 212 162-397 183-428 (434)
257 PRK08360 4-aminobutyrate amino 98.6 2.4E-05 6.1E-10 57.8 18.1 189 189-400 226-429 (443)
258 PRK06931 diaminobutyrate--2-ox 98.6 0.00011 2.7E-09 53.2 20.8 191 184-396 236-448 (454)
259 PRK05093 argD bifunctional N-s 98.6 8.4E-05 2.1E-09 54.0 20.3 266 101-396 103-399 (403)
260 PRK06777 4-aminobutyrate amino 98.6 0.00011 2.7E-09 53.2 20.6 281 86-396 90-420 (421)
261 PRK01278 argD bifunctional N-s 98.6 3E-05 7.7E-10 57.1 17.6 266 102-396 95-387 (389)
262 TIGR01788 Glu-decarb-GAD gluta 98.5 2.1E-05 5.4E-10 58.1 16.6 343 6-382 22-476 (493)
263 PRK02627 acetylornithine amino 98.5 0.00016 4.1E-09 52.0 21.4 286 81-396 84-395 (398)
264 PRK07482 hypothetical protein; 98.5 0.00016 4.1E-09 52.0 23.0 285 85-396 100-453 (461)
265 PRK08555 consensus 98.5 0.00013 3.4E-09 52.6 20.5 180 188-396 243-441 (443)
266 PRK07495 4-aminobutyrate amino 98.5 0.00017 4.2E-09 51.9 21.6 284 86-396 88-418 (422)
267 PRK07030 adenosylmethionine--8 98.5 0.00014 3.7E-09 52.3 20.6 285 101-423 113-464 (467)
268 COG4100 Cystathionine beta-lya 98.5 1.8E-05 4.5E-10 58.7 15.7 280 1-318 2-315 (416)
269 TIGR02618 tyr_phenol_ly tyrosi 98.5 3.5E-05 9E-10 56.6 17.2 347 38-400 33-429 (450)
270 PRK09792 PLP-dependent GABA am 98.5 8.4E-05 2.2E-09 54.0 18.7 268 102-396 108-420 (421)
271 PRK06541 hypothetical protein; 98.5 0.00011 2.9E-09 53.0 19.3 214 162-396 207-454 (460)
272 PRK04013 argD acetylornithine/ 98.5 0.00018 4.5E-09 51.7 20.2 274 80-396 68-359 (364)
273 PRK07036 hypothetical protein; 98.5 0.00012 2.9E-09 53.0 19.2 285 81-396 98-451 (466)
274 PRK06058 4-aminobutyrate amino 98.5 0.00023 5.8E-09 51.0 21.3 193 183-396 238-444 (446)
275 PRK06943 adenosylmethionine--8 98.5 0.00023 5.9E-09 50.9 26.1 209 161-397 206-445 (452)
276 TIGR02617 tnaA_trp_ase tryptop 98.5 3.3E-06 8.5E-11 63.7 10.9 334 28-395 24-440 (468)
277 PRK06918 4-aminobutyrate amino 98.5 0.00013 3.2E-09 52.8 18.9 192 185-398 238-445 (454)
278 PRK07894 consensus 98.5 0.00025 6.4E-09 50.7 23.5 269 102-397 118-428 (430)
279 PRK06105 aminotransferase; Pro 98.4 0.00027 6.9E-09 50.4 22.8 211 162-396 204-448 (460)
280 PRK05639 4-aminobutyrate amino 98.4 0.00027 7E-09 50.4 20.2 189 184-398 239-444 (457)
281 TIGR00474 selA L-seryl-tRNA se 98.4 3.5E-05 9E-10 56.6 15.5 347 20-391 46-446 (448)
282 PRK09221 beta alanine--pyruvat 98.4 0.00032 8.2E-09 49.9 22.9 207 163-397 205-443 (445)
283 PRK07678 aminotransferase; Val 98.4 0.00033 8.4E-09 49.8 20.2 291 85-397 95-449 (451)
284 PRK07046 aminotransferase; Val 98.4 0.00034 8.7E-09 49.7 24.2 282 84-396 119-448 (452)
285 PRK12566 glycine dehydrogenase 98.4 0.0002 5.1E-09 51.3 18.3 276 78-393 121-440 (954)
286 PRK08088 4-aminobutyrate amino 98.4 0.00014 3.6E-09 52.4 17.4 192 185-397 218-424 (426)
287 PRK07483 hypothetical protein; 98.4 0.0004 1E-08 49.3 21.7 296 80-397 75-437 (443)
288 PRK05367 glycine dehydrogenase 98.4 0.00027 6.8E-09 50.5 18.7 278 78-394 122-443 (955)
289 PRK05769 4-aminobutyrate amino 98.4 0.00044 1.1E-08 49.0 20.8 178 190-396 245-439 (442)
290 PRK06916 adenosylmethionine--8 98.3 0.00049 1.2E-08 48.7 19.9 286 86-397 108-457 (462)
291 PRK07481 hypothetical protein; 98.3 0.00038 9.7E-09 49.4 18.6 269 101-397 110-444 (448)
292 COG3844 Kynureninase [Amino ac 98.3 0.00053 1.4E-08 48.4 19.0 319 44-397 42-402 (407)
293 TIGR03372 putres_am_tran putre 98.3 0.00065 1.7E-08 47.8 19.3 267 101-395 140-442 (442)
294 PRK08297 L-lysine aminotransfe 98.2 0.00045 1.2E-08 48.9 17.1 205 162-397 218-447 (449)
295 PRK07323 consensus 98.2 0.00085 2.2E-08 47.0 21.2 269 101-396 126-441 (443)
296 TIGR02379 ECA_wecE TDP-4-keto- 98.2 0.00086 2.2E-08 46.9 20.8 293 82-395 34-375 (376)
297 PRK12389 glutamate-1-semialdeh 98.2 0.00086 2.2E-08 46.9 23.1 282 85-396 99-426 (429)
298 PRK07480 putative aminotransfe 98.2 0.00087 2.2E-08 46.9 21.5 278 86-397 104-451 (459)
299 pfam00202 Aminotran_3 Aminotra 98.2 0.00024 6E-09 50.8 15.5 228 84-332 64-329 (338)
300 KOG0629 consensus 98.2 5.3E-05 1.4E-09 55.4 12.0 233 81-318 145-422 (510)
301 TIGR03531 selenium_SpcS O-phos 98.2 0.001 2.6E-08 46.4 20.6 295 71-383 97-414 (444)
302 PRK00615 glutamate-1-semialdeh 98.2 0.0011 2.8E-08 46.2 22.0 270 101-397 116-428 (433)
303 PRK05630 adenosylmethionine--8 98.2 0.0011 2.8E-08 46.2 21.7 184 190-398 226-423 (423)
304 PRK06148 hypothetical protein; 98.2 0.0011 2.9E-08 46.1 19.1 182 189-397 808-1012(1015)
305 COG0161 BioA Adenosylmethionin 98.1 0.00051 1.3E-08 48.5 15.2 288 79-397 88-443 (449)
306 TIGR00461 gcvP glycine dehydro 98.1 0.00021 5.3E-09 51.2 12.8 318 13-347 452-852 (965)
307 KOG0256 consensus 98.0 0.00083 2.1E-08 47.0 14.5 302 74-395 128-459 (471)
308 PRK06942 glutamate-1-semialdeh 98.0 0.0025 6.3E-08 43.8 17.0 286 83-396 95-423 (425)
309 PRK06082 4-aminobutyrate amino 98.0 0.0027 6.9E-08 43.5 19.6 287 81-396 117-451 (460)
310 PRK03715 argD bifunctional N-s 98.0 0.0027 7E-08 43.4 19.7 262 101-397 99-393 (395)
311 TIGR03251 LAT_fam L-lysine 6-t 97.9 0.0029 7.5E-08 43.2 21.0 180 187-393 238-430 (431)
312 TIGR01324 cysta_beta_ly_B cyst 97.9 9.8E-05 2.5E-09 53.5 8.8 179 68-262 45-233 (389)
313 TIGR01264 tyr_amTase_E tyrosin 97.9 0.0036 9.3E-08 42.6 17.1 317 37-386 47-402 (415)
314 cd00611 PSAT_like Phosphoserin 97.9 0.0039 1E-07 42.4 19.0 318 38-393 3-352 (355)
315 KOG0259 consensus 97.8 0.0014 3.5E-08 45.5 13.3 295 47-370 85-412 (447)
316 KOG1411 consensus 97.8 0.0012 3E-08 46.0 12.9 318 43-396 69-424 (427)
317 pfam05889 SLA_LP_auto_ag Solub 97.8 0.0053 1.4E-07 41.4 23.6 312 71-396 48-389 (389)
318 COG1932 SerC Phosphoserine ami 97.8 0.0054 1.4E-07 41.4 16.8 285 76-396 47-362 (365)
319 KOG1404 consensus 97.8 0.0018 4.6E-08 44.7 13.3 202 163-391 199-432 (442)
320 KOG0633 consensus 97.7 0.0019 4.7E-08 44.6 12.5 257 98-378 88-367 (375)
321 KOG1358 consensus 97.7 0.003 7.7E-08 43.1 13.5 331 33-396 94-464 (467)
322 PRK12403 putative aminotransfe 97.7 0.0071 1.8E-07 40.6 21.8 205 164-396 210-451 (460)
323 TIGR00707 argD acetylornithine 97.7 0.0079 2E-07 40.2 19.0 281 76-395 69-401 (402)
324 TIGR02006 IscS cysteine desulf 97.6 0.003 7.7E-08 43.1 12.9 338 40-395 10-377 (404)
325 PRK06209 glutamate-1-semialdeh 97.6 0.0089 2.3E-07 39.9 22.3 279 85-396 94-404 (431)
326 PRK06149 hypothetical protein; 97.6 0.0098 2.5E-07 39.6 19.0 183 188-396 765-969 (972)
327 PRK00062 glutamate-1-semialdeh 97.6 0.01 2.6E-07 39.4 22.2 286 85-396 98-425 (429)
328 PRK08742 adenosylmethionine--8 97.5 0.011 2.8E-07 39.2 17.4 207 162-397 223-467 (472)
329 PRK03080 phosphoserine aminotr 97.4 0.017 4.2E-07 38.0 15.7 286 73-396 43-375 (381)
330 COG0001 HemL Glutamate-1-semia 97.4 0.018 4.5E-07 37.8 18.5 297 79-396 93-427 (432)
331 PRK12462 phosphoserine aminotr 97.1 0.033 8.5E-07 35.9 17.8 329 33-394 3-359 (364)
332 TIGR01814 kynureninase kynuren 97.0 0.026 6.7E-07 36.6 11.4 284 83-395 90-443 (444)
333 KOG1405 consensus 96.9 0.028 7.2E-07 36.4 11.4 321 31-395 83-481 (484)
334 TIGR00699 GABAtrns_euk 4-amino 96.9 0.0049 1.2E-07 41.7 7.3 277 53-352 89-440 (469)
335 COG0160 GabT 4-aminobutyrate a 96.6 0.084 2.1E-06 33.1 22.5 284 85-397 105-445 (447)
336 PRK05355 phosphoserine aminotr 96.5 0.095 2.4E-06 32.7 18.9 316 36-394 5-355 (360)
337 TIGR00713 hemL glutamate-1-sem 96.4 0.11 2.8E-06 32.3 11.5 284 79-395 88-427 (434)
338 KOG1412 consensus 96.0 0.17 4.4E-06 30.9 14.7 290 81-398 77-406 (410)
339 KOG0628 consensus 95.5 0.27 6.8E-06 29.6 11.9 303 74-397 108-471 (511)
340 TIGR01140 CobD L-threonine-O-3 95.0 0.37 9.5E-06 28.6 9.9 280 38-350 10-316 (349)
341 TIGR01437 selA_rel pyridoxal p 94.9 0.39 1E-05 28.4 13.1 316 41-397 22-389 (391)
342 KOG1401 consensus 94.7 0.43 1.1E-05 28.1 12.0 193 102-311 123-349 (433)
343 KOG3846 consensus 94.1 0.58 1.5E-05 27.2 14.7 295 67-396 105-460 (465)
344 KOG2040 consensus 93.8 0.66 1.7E-05 26.9 10.4 221 77-316 159-420 (1001)
345 COG3977 Alanine-alpha-ketoisov 91.8 1.2 3.1E-05 25.0 14.1 284 71-370 70-390 (417)
346 KOG0258 consensus 91.1 1.4 3.6E-05 24.5 8.6 264 85-374 126-448 (475)
347 KOG1402 consensus 90.2 1.7 4.3E-05 24.0 15.7 273 86-396 108-426 (427)
348 TIGR01885 Orn_aminotrans ornit 89.9 1.8 4.6E-05 23.8 14.3 279 76-395 81-426 (426)
349 TIGR02026 BchE magnesium-proto 87.7 0.59 1.5E-05 27.2 3.2 68 144-222 36-106 (506)
350 PRK04286 hypothetical protein; 87.3 2.3 5.9E-05 23.1 6.0 90 117-208 144-246 (294)
351 TIGR02034 CysN sulfate adenyly 84.2 0.57 1.5E-05 27.3 1.7 103 13-126 144-258 (411)
352 KOG1907 consensus 84.1 2 5.1E-05 23.5 4.5 111 204-321 672-795 (1320)
353 PRK13397 3-deoxy-7-phosphohept 83.4 2.3 6E-05 23.0 4.5 49 165-213 142-196 (250)
354 TIGR00732 dprA DNA protecting 82.1 2.1 5.4E-05 23.3 3.9 19 300-318 78-96 (238)
355 cd02032 Bchl_like This family 80.6 5 0.00013 20.8 5.6 114 103-230 14-142 (267)
356 TIGR01830 3oxo_ACP_reduc 3-oxo 80.5 5 0.00013 20.7 5.4 71 288-392 146-219 (238)
357 KOG3843 consensus 79.3 5.4 0.00014 20.5 6.0 309 72-396 50-401 (432)
358 PRK09275 aspartate aminotransf 78.8 5.6 0.00014 20.4 20.3 340 23-396 101-520 (531)
359 TIGR02875 spore_0_A sporulatio 78.1 2.9 7.5E-05 22.4 3.6 38 162-199 67-124 (270)
360 KOG1138 consensus 78.1 5.6 0.00014 20.4 5.0 133 50-197 345-489 (653)
361 TIGR01214 rmlD dTDP-4-dehydror 77.9 4 0.0001 21.4 4.2 62 161-229 48-131 (317)
362 TIGR02407 ectoine_ectB diamino 77.8 6 0.00015 20.2 5.3 245 93-358 96-385 (413)
363 TIGR01440 TIGR01440 conserved 76.7 2.7 6.8E-05 22.6 3.1 57 70-128 64-137 (172)
364 cd04733 OYE_like_2_FMN Old yel 75.9 6.7 0.00017 19.9 5.4 157 189-394 83-248 (338)
365 TIGR00738 rrf2_super rrf2 fami 75.2 1.3 3.3E-05 24.8 1.1 64 235-298 55-124 (133)
366 KOG1403 consensus 74.6 7.2 0.00018 19.6 18.1 338 23-396 40-436 (452)
367 COG3964 Predicted amidohydrola 74.2 4.3 0.00011 21.2 3.6 156 68-251 65-228 (386)
368 cd05536 POLBc_B3 DNA polymeras 73.1 6 0.00015 20.2 4.1 22 409-433 350-371 (371)
369 COG1091 RfbD dTDP-4-dehydrorha 73.0 7.9 0.0002 19.4 5.0 46 160-206 37-97 (281)
370 PRK13690 hypothetical protein; 71.6 8.5 0.00022 19.2 4.9 92 70-184 71-179 (183)
371 pfam04260 DUF436 Protein of un 71.5 8.5 0.00022 19.1 4.6 85 70-177 64-165 (172)
372 PRK13398 3-deoxy-7-phosphohept 71.2 8.6 0.00022 19.1 4.8 50 164-213 153-208 (266)
373 COG2877 KdsA 3-deoxy-D-manno-o 70.8 8.7 0.00022 19.1 4.5 48 165-212 151-201 (279)
374 TIGR01217 ac_ac_CoA_syn acetoa 69.7 5.9 0.00015 20.2 3.4 141 96-247 130-308 (676)
375 TIGR03275 methan_mark_8 putati 69.5 2.8 7.2E-05 22.5 1.7 87 153-243 142-228 (259)
376 pfam00136 DNA_pol_B DNA polyme 68.8 9.7 0.00025 18.7 6.9 37 291-327 188-224 (458)
377 pfam04864 Alliinase_C Allinase 68.7 9.7 0.00025 18.7 13.6 182 191-392 151-360 (363)
378 pfam02310 B12-binding B12 bind 68.5 9.8 0.00025 18.7 6.1 52 159-210 37-90 (121)
379 cd01976 Nitrogenase_MoFe_alpha 68.5 9.8 0.00025 18.7 5.1 85 300-396 312-420 (421)
380 COG3010 NanE Putative N-acetyl 67.3 10 0.00026 18.5 6.4 68 161-235 87-156 (229)
381 TIGR01369 CPSaseII_lrg carbamo 67.0 10 0.00027 18.5 4.6 186 81-328 633-858 (1089)
382 cd05532 POLBc_alpha DNA polyme 66.5 11 0.00027 18.4 6.7 13 335-347 313-325 (400)
383 pfam10081 DUF2319 Predicted me 66.4 3.5 8.9E-05 21.8 1.7 163 33-209 185-391 (534)
384 TIGR02418 acolac_catab acetola 66.2 5.3 0.00013 20.6 2.6 93 98-200 133-228 (553)
385 KOG0926 consensus 65.8 1.5 3.8E-05 24.4 -0.3 88 173-268 413-511 (1172)
386 pfam04131 NanE Putative N-acet 65.6 11 0.00028 18.3 6.9 70 160-235 52-121 (192)
387 COG4566 TtrR Response regulato 64.6 12 0.0003 18.2 5.6 49 301-349 18-77 (202)
388 cd02068 radical_SAM_B12_BD B12 64.5 9.6 0.00025 18.8 3.7 49 160-210 26-77 (127)
389 PRK05269 transaldolase B; Prov 63.9 12 0.0003 18.1 5.4 12 201-212 154-165 (320)
390 COG2248 Predicted hydrolase (m 63.9 12 0.00031 18.1 5.7 50 158-208 187-246 (304)
391 cd02067 B12-binding B12 bindin 63.4 12 0.00031 18.0 4.8 57 141-202 23-79 (119)
392 TIGR00874 talAB transaldolase; 62.9 12 0.00032 18.0 5.4 126 199-351 8-158 (324)
393 TIGR03206 benzo_BadH 2-hydroxy 62.5 13 0.00032 17.9 4.7 77 288-392 148-230 (250)
394 pfam09872 DUF2099 Uncharacteri 62.4 4.8 0.00012 20.9 1.8 83 153-240 142-224 (257)
395 pfam08844 DUF1815 Domain of un 62.0 13 0.00033 17.9 4.7 29 287-315 6-34 (106)
396 COG1827 Predicted small molecu 62.0 11 0.00029 18.3 3.6 149 174-349 17-168 (168)
397 PRK13235 nifH nitrogenase redu 58.7 15 0.00037 17.5 6.1 113 103-228 15-144 (274)
398 PRK09390 fixJ response regulat 56.7 16 0.0004 17.3 4.6 36 162-198 36-71 (202)
399 PRK12394 putative metallo-depe 56.1 16 0.00041 17.2 6.9 74 159-235 137-217 (387)
400 cd05537 POLBc_Pol_II DNA polym 55.8 16 0.00042 17.2 4.2 35 290-327 124-158 (371)
401 PRK12309 transaldolase/EF-hand 55.6 16 0.00042 17.2 5.5 49 150-205 198-246 (391)
402 TIGR01364 serC_1 phosphoserine 55.5 7.5 0.00019 19.5 1.8 317 44-393 10-386 (391)
403 PRK05339 hypothetical protein; 55.0 17 0.00043 17.1 4.2 38 319-358 147-185 (273)
404 COG4962 CpaF Flp pilus assembl 54.4 17 0.00044 17.0 4.8 70 142-211 138-212 (355)
405 pfam03618 DUF299 Domain of unk 54.3 13 0.00034 17.8 2.9 43 317-361 134-177 (255)
406 COG0853 PanD Aspartate 1-decar 54.3 6.4 0.00016 20.0 1.3 18 167-184 95-112 (126)
407 COG3414 SgaB Phosphotransferas 53.9 17 0.00044 17.0 3.9 69 176-250 5-76 (93)
408 pfam02492 cobW CobW/HypB/UreG, 53.0 18 0.00046 16.9 3.8 69 165-233 74-145 (174)
409 COG0373 HemA Glutamyl-tRNA red 52.7 18 0.00046 16.8 7.2 13 189-201 211-223 (414)
410 PRK13396 3-deoxy-7-phosphohept 52.6 18 0.00047 16.8 5.1 65 162-232 114-190 (352)
411 cd05534 POLBc_zeta DNA polymer 52.3 18 0.00047 16.8 6.5 36 292-327 200-235 (451)
412 pfam09537 DUF2383 Domain of un 52.2 5 0.00013 20.7 0.5 59 285-344 32-93 (111)
413 cd02803 OYE_like_FMN_family Ol 52.1 19 0.00047 16.8 5.4 84 305-394 148-240 (327)
414 pfam02261 Asp_decarbox Asparta 51.9 5.5 0.00014 20.4 0.7 20 115-134 37-56 (116)
415 CHL00072 chlL photochlorophyll 51.7 19 0.00048 16.7 8.0 114 103-228 14-140 (271)
416 TIGR01829 AcAcCoA_reduct aceto 51.2 7.4 0.00019 19.6 1.2 33 294-326 156-191 (244)
417 PRK01130 N-acetylmannosamine-6 50.8 19 0.00049 16.6 7.0 70 160-235 76-148 (222)
418 PRK12607 phosphoribosylaminoim 50.8 19 0.00049 16.6 3.6 40 288-327 171-216 (295)
419 cd00145 POLBc DNA polymerase t 50.8 19 0.00049 16.7 3.3 57 261-327 113-169 (323)
420 cd06919 Asp_decarbox Aspartate 50.7 6.3 0.00016 20.1 0.8 19 116-134 37-55 (111)
421 KOG1014 consensus 50.7 20 0.0005 16.6 3.9 62 141-208 69-133 (312)
422 COG1504 Uncharacterized conser 50.2 20 0.0005 16.6 5.0 49 157-206 46-94 (121)
423 cd01832 SGNH_hydrolase_like_1 50.1 18 0.00045 17.0 3.0 51 154-204 86-148 (185)
424 TIGR01283 nifE nitrogenase MoF 49.0 21 0.00053 16.5 6.8 105 96-205 34-161 (470)
425 PRK05449 aspartate alpha-decar 48.6 6.5 0.00017 19.9 0.6 59 116-184 38-113 (126)
426 KOG0062 consensus 47.9 21 0.00055 16.3 6.3 45 159-211 277-322 (582)
427 PRK08673 3-deoxy-7-phosphohept 47.4 22 0.00056 16.3 5.2 95 162-274 106-213 (335)
428 TIGR01575 rimI ribosomal-prote 47.2 14 0.00035 17.7 2.1 60 181-240 10-75 (140)
429 COG1163 DRG Predicted GTPase [ 46.2 23 0.00058 16.2 4.7 16 186-201 197-212 (365)
430 KOG2099 consensus 45.9 6.8 0.00017 19.8 0.4 193 185-397 418-631 (843)
431 cd01833 XynB_like SGNH_hydrola 45.6 23 0.00059 16.1 4.0 16 161-176 65-80 (157)
432 TIGR00730 TIGR00730 conserved 45.3 21 0.00055 16.3 2.8 44 78-121 15-58 (205)
433 TIGR01852 lipid_A_lpxA acyl-[a 45.3 23 0.0006 16.1 3.9 93 295-401 126-223 (257)
434 COG4607 CeuA ABC-type enteroch 44.9 21 0.00053 16.4 2.7 44 158-210 107-150 (320)
435 PRK12595 bifunctional 3-deoxy- 44.8 24 0.00061 16.0 5.1 127 116-275 100-239 (360)
436 cd00957 Transaldolase_TalAB Tr 44.6 24 0.00061 16.0 5.4 13 200-212 151-163 (313)
437 COG2099 CobK Precorrin-6x redu 44.5 21 0.00053 16.4 2.7 85 101-205 7-97 (257)
438 PRK07449 2-succinyl-6-hydroxy- 44.5 24 0.00061 16.0 4.5 38 167-208 210-247 (548)
439 PRK05762 DNA polymerase II; Re 44.3 24 0.00062 16.0 4.4 36 290-328 520-555 (785)
440 PRK13129 consensus 44.3 22 0.00057 16.2 2.8 94 106-208 33-132 (267)
441 COG2185 Sbm Methylmalonyl-CoA 44.2 24 0.00062 16.0 4.2 92 119-223 12-106 (143)
442 TIGR00250 TIGR00250 conserved 44.2 21 0.00054 16.4 2.7 60 156-234 32-99 (133)
443 KOG0630 consensus 44.0 25 0.00063 15.9 4.6 59 157-215 271-337 (838)
444 COG3220 Uncharacterized protei 43.8 25 0.00063 15.9 3.8 91 109-211 77-176 (282)
445 cd05531 POLBc_B2 DNA polymeras 43.7 25 0.00063 15.9 4.5 29 292-323 130-158 (352)
446 TIGR02769 nickel_nikE nickel i 43.0 18 0.00047 16.8 2.2 32 169-200 165-222 (267)
447 TIGR01362 KDO8P_synth 3-deoxy- 41.6 27 0.00068 15.7 3.0 120 71-212 54-202 (279)
448 PRK13118 consensus 40.4 28 0.0007 15.6 3.0 94 107-209 32-132 (269)
449 COG1751 Uncharacterized conser 40.1 28 0.00071 15.5 6.7 140 71-248 6-163 (186)
450 PRK12746 short chain dehydroge 39.7 28 0.00072 15.5 5.0 29 294-322 165-196 (254)
451 TIGR02485 CobZ_N-term precorri 39.0 18 0.00047 16.8 1.7 57 301-357 223-280 (467)
452 COG2987 HutU Urocanate hydrata 38.8 18 0.00046 16.9 1.6 57 283-339 227-285 (561)
453 PRK11145 pflA pyruvate formate 38.6 29 0.00075 15.4 2.9 51 159-209 50-107 (246)
454 PRK06852 aldolase; Validated 38.5 30 0.00075 15.4 4.0 19 112-130 23-41 (303)
455 PRK09192 acyl-CoA synthetase; 38.3 30 0.00076 15.4 6.8 15 330-344 469-483 (580)
456 COG0459 GroL Chaperonin GroEL 38.1 26 0.00065 15.8 2.3 24 194-217 307-330 (524)
457 KOG0634 consensus 37.9 30 0.00077 15.3 12.0 308 71-397 96-466 (472)
458 COG2895 CysN GTPases - Sulfate 37.8 23 0.0006 16.1 2.1 102 13-126 150-260 (431)
459 PRK13185 chlL protochlorophyll 37.8 30 0.00077 15.3 5.2 115 103-229 16-143 (269)
460 PRK00912 ribonuclease P protei 37.8 30 0.00077 15.3 3.1 72 293-369 152-233 (237)
461 PRK10736 hypothetical protein; 37.7 30 0.00078 15.3 3.9 63 192-258 201-274 (364)
462 COG4475 Uncharacterized protei 37.7 30 0.00078 15.3 3.4 55 70-126 69-140 (180)
463 cd02065 B12-binding_like B12 b 37.6 31 0.00078 15.3 5.1 58 159-226 36-95 (125)
464 TIGR00624 tag DNA-3-methyladen 37.3 21 0.00054 16.4 1.8 17 299-315 144-160 (185)
465 cd03067 PDI_b_PDIR_N PDIb fami 36.5 32 0.00081 15.2 3.8 53 160-212 7-62 (112)
466 TIGR02545 ATP_syn_fliI flagell 36.3 32 0.00081 15.1 4.8 61 300-395 236-296 (439)
467 cd05530 POLBc_B1 DNA polymeras 36.2 32 0.00082 15.1 4.0 14 337-350 313-326 (372)
468 COG3473 Maleate cis-trans isom 36.1 18 0.00046 16.9 1.3 80 228-324 69-160 (238)
469 cd01130 VirB11-like_ATPase Typ 36.0 32 0.00082 15.1 4.6 76 101-182 34-109 (186)
470 COG0417 PolB DNA polymerase el 35.9 32 0.00082 15.1 3.2 59 288-349 534-598 (792)
471 COG1959 Predicted transcriptio 35.9 32 0.00082 15.1 2.8 25 223-252 48-72 (150)
472 TIGR02787 codY_Gpos GTP-sensin 35.7 32 0.00081 15.2 2.5 34 317-350 197-234 (255)
473 KOG1486 consensus 35.7 33 0.00083 15.1 3.5 10 338-347 280-289 (364)
474 TIGR02529 EutJ ethanolamine ut 35.4 33 0.00084 15.0 3.9 66 114-200 123-189 (240)
475 TIGR02733 desat_CrtD C-3',4' d 35.1 13 0.00034 17.8 0.5 15 192-206 312-326 (499)
476 pfam07454 SpoIIP Stage II spor 34.9 29 0.00075 15.4 2.2 61 295-356 98-163 (258)
477 pfam11794 HpaB_N 4-hydroxyphen 34.5 34 0.00087 15.0 2.5 129 165-316 5-142 (265)
478 PRK11920 rirA iron-responsive 34.5 16 0.00041 17.2 0.8 16 236-251 55-70 (153)
479 KOG3890 consensus 34.0 35 0.00088 14.9 3.7 126 161-300 157-294 (391)
480 cd00156 REC Signal receiver do 33.9 30 0.00076 15.4 2.1 46 299-344 9-65 (113)
481 PRK11153 metN DL-methionine tr 33.8 35 0.00089 14.9 6.6 129 79-238 116-249 (343)
482 TIGR02316 propion_prpE propion 33.8 35 0.00089 14.9 5.1 29 96-124 88-117 (634)
483 cd03267 ABC_NatA_like Similar 33.7 35 0.00089 14.9 7.2 16 378-393 183-198 (236)
484 TIGR02845 spore_V_AD stage V s 33.7 35 0.00089 14.9 3.6 109 203-328 129-266 (331)
485 PRK09107 acetolactate synthase 33.6 35 0.00089 14.9 3.3 66 163-231 202-284 (594)
486 PRK13135 consensus 33.5 35 0.0009 14.8 3.0 93 107-208 32-130 (267)
487 TIGR01670 YrbI-phosphatas 3-de 33.4 17 0.00043 17.1 0.8 126 242-394 14-151 (154)
488 PRK13638 cbiO cobalt transport 33.4 35 0.0009 14.8 6.8 94 85-209 117-213 (271)
489 TIGR00972 3a0107s01c2 phosphat 33.0 35 0.00089 14.9 2.3 81 154-259 39-123 (248)
490 PRK13651 cobalt transporter AT 33.0 36 0.00091 14.8 6.9 11 191-201 94-104 (304)
491 PRK07825 short chain dehydroge 33.0 24 0.0006 16.1 1.5 40 286-325 144-189 (273)
492 COG0159 TrpA Tryptophan syntha 32.7 36 0.00093 14.8 3.2 95 105-208 30-131 (265)
493 TIGR02660 nifV_homocitr homoci 32.6 36 0.00093 14.7 3.1 18 209-226 282-299 (369)
494 KOG3489 consensus 32.6 33 0.00085 15.0 2.2 22 13-34 6-27 (86)
495 PRK09997 hydroxypyruvate isome 32.6 36 0.00093 14.7 3.5 117 167-315 22-141 (258)
496 TIGR02647 DNA conserved hypoth 32.3 37 0.00094 14.7 2.6 53 75-134 6-58 (77)
497 PRK11014 transcriptional repre 31.9 17 0.00044 17.0 0.6 17 236-252 56-72 (141)
498 cd00951 KDGDH 5-dehydro-4-deox 31.8 37 0.00095 14.7 4.0 48 152-200 11-62 (289)
499 COG1105 FruK Fructose-1-phosph 31.8 38 0.00096 14.7 5.3 60 151-210 102-168 (310)
500 PRK08303 short chain dehydroge 31.7 38 0.00096 14.7 4.5 57 296-373 182-241 (305)
No 1
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=0 Score=1196.07 Aligned_cols=418 Identities=60% Similarity=1.002 Sum_probs=410.5
Q ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 36776469785899999999999999838881043010298999983051028865798887533600679999999999
Q gi|254780349|r 7 NRFFQQSLIESDPDVFSLIGQESCRQNDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIE 86 (433)
Q Consensus 7 ~~~~~~~l~~~Dpei~~~i~~e~~rq~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~ 86 (433)
--||+++|++.||||+++|++|.+||+++|+||||||++||+|++++||+|+|||||||||+|||+||+++|+||.||++
T Consensus 5 ~~~~~~~l~~~Dpei~~~i~~E~~RQ~~~l~LIASEN~~S~~v~~a~gS~ltnkYaEGyPg~RyY~G~~~iD~iE~la~~ 84 (422)
T PRK13034 5 MFFFSDQLAERDDAVRAAILAELQRQQDQIELIASENIVSKAVLQAQGSVLTNKYAEGYPGKRYYGGCEHVDEVEALAIE 84 (422)
T ss_pred HHHHCCCHHHCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 32202505340999999999999999759548605775899999985662126466889986554775369999999999
Q ss_pred HHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 99987188630100001679999999983154874881233448411147665433333220136658323565989999
Q gi|254780349|r 87 RAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIE 166 (433)
Q Consensus 87 ~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~ 166 (433)
|||+|||++|||||||||++||++||+||++|||+||+|++++|||||||++++++|++|++++|++|++++.||||+++
T Consensus 85 rak~LF~a~~anVqp~SGs~AN~av~~all~PGD~im~l~l~~GGHltHG~~~~~sg~~~~~~~Y~vd~~~~~IDyd~l~ 164 (422)
T PRK13034 85 RAKQLFGADYANVQPHSGSQANGAVYLALLKPGDTILGMSLDAGGHLTHGAKVALSGKWFNAVQYGVDRDTGLIDYDQVE 164 (422)
T ss_pred HHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHH
T ss_conf 99998499963547786199999999996489986884367777625578875534560478982175323822799999
Q ss_pred HHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEE
Q ss_conf 99986046678970552435363799998864179789918620124432000123220023567404565225674489
Q gi|254780349|r 167 SLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHIVTTTTHKSLRGPRGGLI 246 (433)
Q Consensus 167 ~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt~sTHKtl~GPrgGiI 246 (433)
++++++||||||+|+|+|||++||++||||||+|||+||+|+||++||||||+|||||+||||||+||||||||||||||
T Consensus 165 ~~a~~~kPklIi~G~Say~r~id~k~~reIAd~vGA~l~~D~AHiaGLIA~g~~psP~~~ADvvT~TTHKTLrGPrGGiI 244 (422)
T PRK13034 165 RLAVEHKPKLIIAGFSAYPRTLDFARFRAIADSVGAILMVDMAHIAGLVAAGRHPNPVPHAHVVTTTTHKTLRGPRGGMI 244 (422)
T ss_pred HHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCEEEECHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCEE
T ss_conf 99873199869966612442128899999998729779811565545410333699877752886775147789884357
Q ss_pred EECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
Q ss_conf 83362056501664654322344556668999999997356489999999988899999986168523345888981263
Q gi|254780349|r 247 MTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLV 326 (433)
Q Consensus 247 ~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlv 326 (433)
|||+++++++||++||||+|||||+|+|||+||||+|+++|+|++|++|||+|||+||++|.++||+|++||||||||||
T Consensus 245 l~~~~el~~kId~avFPg~qggp~~h~iAa~Ava~~Ea~~~~f~~Ya~qVv~NAkaLa~~L~~~G~~vv~ggTdnHlvlv 324 (422)
T PRK13034 245 LTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALEPGFKTYIDQVIANAQALAEVLKARGYDLVTGGTDNHLLLV 324 (422)
T ss_pred ECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEE
T ss_conf 52669999986433388645671577899999999996687699999999999999999999789804579998763665
Q ss_pred CCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH
Q ss_conf 16655676799999888567188037899899998889851224666730799989999999999999602577621179
Q gi|254780349|r 327 DLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDGSSSDEENHS 406 (433)
Q Consensus 327 dl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~~~~~~~~~~ 406 (433)
|++++|++|++++++|+++||+||||+|||||++|++|||||||||++|||||+|+||++||+||+++|+...+ .++++
T Consensus 325 Dl~~~gi~G~~a~~~L~~~gI~~Nkn~iP~D~~~p~~~sGiRiGt~a~TtRG~~e~em~~ia~~I~~vl~~~~~-~~d~~ 403 (422)
T PRK13034 325 DLRPKGLTGKQAEQALERAGITVNKNGIPFDPEKPFVTSGIRIGTPAGTTRGFGAAEFREIAGWILDVLDALRA-NGDAA 403 (422)
T ss_pred ECCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHCCC-CCCHH
T ss_conf 35656775699999999839586678688999899889812667788983899889999999999999973467-88699
Q ss_pred HHHHHHHHHHHHHHHCCCC
Q ss_conf 9999999999999708799
Q gi|254780349|r 407 LELTVLHKVQEFVHCFPIY 425 (433)
Q Consensus 407 ~~~~ir~~V~~l~~~fPiy 425 (433)
...+||++|.+||.+||+|
T Consensus 404 ~~~~i~~~V~~L~~~fPlY 422 (422)
T PRK13034 404 VEQRVRKEVFALCARFPLY 422 (422)
T ss_pred HHHHHHHHHHHHHHHCCCC
T ss_conf 9999999999999847999
No 2
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=0 Score=1197.12 Aligned_cols=410 Identities=63% Similarity=1.038 Sum_probs=403.5
Q ss_pred HHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 64697858999999999999998388810430102989999830510288657988875336006799999999999998
Q gi|254780349|r 11 QQSLIESDPDVFSLIGQESCRQNDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKK 90 (433)
Q Consensus 11 ~~~l~~~Dpei~~~i~~e~~rq~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~ 90 (433)
.+.|.+.||+|+++|++|..||+++|+||||||++||+|++++||+|+|||||||||+|||+||+|+|++|.||+||||+
T Consensus 4 ~~~l~~~d~~i~~~i~~e~~rq~~~ieLIASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~ 83 (413)
T COG0112 4 YASLADYDPEIFEAIQQELERQREHIELIASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKK 83 (413)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHH
T ss_conf 35477609999999999999886343355125547899999974577530115899763567872179999999999999
Q ss_pred HCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 71886301000016799999999831548748812334484111476654333332201366583235659899999998
Q gi|254780349|r 91 LFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAI 170 (433)
Q Consensus 91 lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~ 170 (433)
|||++|||||||||++||++||+||++|||+||+|++++|||||||++++++|++|++++|++|++++.||||+++++|+
T Consensus 84 LFga~~anVQPhSGs~AN~av~~All~pGD~imgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~ 163 (413)
T COG0112 84 LFGAEYANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAK 163 (413)
T ss_pred HHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHH
T ss_conf 84887504588875689999999973898857505678787655799877664057767624063347517999999999
Q ss_pred HHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEEEECC
Q ss_conf 60466789705524353637999988641797899186201244320001232200235674045652256744898336
Q gi|254780349|r 171 EYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHIVTTTTHKSLRGPRGGLIMTNH 250 (433)
Q Consensus 171 ~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~ 250 (433)
++||||||+|+|+|+|++||++||||||+|||+||||+||++||||||+||||++||||||+|||||||||||||||||+
T Consensus 164 e~kPKlii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGPrGG~Il~~~ 243 (413)
T COG0112 164 EVKPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGPRGGIILTND 243 (413)
T ss_pred HHCCCEEEECCCCCCCCCCHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECC
T ss_conf 84997899776035544678999999987193677217788888745667999875526757753477899841798362
Q ss_pred CCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC
Q ss_conf 20565016646543223445566689999999973564899999999888999999861685233458889812631665
Q gi|254780349|r 251 ADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRS 330 (433)
Q Consensus 251 ~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~ 330 (433)
+|++++||++||||+|||||+|+||||||||+||++|+|++|++|||+|||+||++|.++||+|++|||||||||||+++
T Consensus 244 eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTdnHl~lVDl~~ 323 (413)
T COG0112 244 EELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGTDNHLVLVDLRS 323 (413)
T ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCC
T ss_conf 99998764000776678827888999999999972813899999999999999999997698671588644489997246
Q ss_pred CCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 56767999998885671880378998999988898512246667307999899999999999996025776211799999
Q gi|254780349|r 331 KRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDGSSSDEENHSLELT 410 (433)
Q Consensus 331 ~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~~~~~~~~~~~~~~ 410 (433)
++++|++++..|+++||+||||+|||||++|++||||||||||+|||||+|+||++||+||+++|+... .+..+
T Consensus 324 ~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~~------~~~~~ 397 (413)
T COG0112 324 KGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGLK------DVPAE 397 (413)
T ss_pred CCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCC------HHHHH
T ss_conf 798778999999970976526889999988878766340668886357988999999999999995500------56999
Q ss_pred HHHHHHHHHHHCCCCC
Q ss_conf 9999999997087999
Q gi|254780349|r 411 VLHKVQEFVHCFPIYD 426 (433)
Q Consensus 411 ir~~V~~l~~~fPiy~ 426 (433)
+|++|.+||.+||+|.
T Consensus 398 vk~~V~~l~~~fp~y~ 413 (413)
T COG0112 398 VKEEVAELCRRFPLYK 413 (413)
T ss_pred HHHHHHHHHHHCCCCC
T ss_conf 9999999998488989
No 3
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=0 Score=1171.50 Aligned_cols=416 Identities=44% Similarity=0.731 Sum_probs=403.5
Q ss_pred HHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 46978589999999999999983888104301029899998305102886579888753360067999999999999987
Q gi|254780349|r 12 QSLIESDPDVFSLIGQESCRQNDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKL 91 (433)
Q Consensus 12 ~~l~~~Dpei~~~i~~e~~rq~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~l 91 (433)
+.+++.||||+++|++|.+||+++|+|||||||+|++|++++||+|+|||||||||+|||+||+++|+||.||++|||+|
T Consensus 30 ~~~~~~DPei~~~i~~E~~RQ~~~l~LIASEN~~S~aV~ea~gS~ltnKYAEGyPG~RYY~Gce~vD~iE~lai~rak~L 109 (493)
T PRK13580 30 DHILHVFPRIAEAIRQELKDQRSSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDAIEWEAAEHAREL 109 (493)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 78865298999999999999878866973488788999998567310124588998632377577999999999999998
Q ss_pred CCCCCEECCCHHHHHHHHHHHHHHH-----CCC--------------------------CEEEECCCCCCCCCCCCCCCC
Q ss_conf 1886301000016799999999831-----548--------------------------748812334484111476654
Q gi|254780349|r 92 FNVNFVNVQSHSGSQMNQGVFLALM-----HPG--------------------------DSFMGLSLDSGGHLTHGSSVN 140 (433)
Q Consensus 92 F~a~~anvqp~SG~~An~av~~ALl-----~pG--------------------------D~Il~~~l~~GGHlshg~~~~ 140 (433)
|||+|||||||||++||++||+||+ +|| |+||+|++++|||||||++++
T Consensus 110 F~a~~aNVQP~SGs~AN~avy~All~~~v~~Pgl~~~g~~~~~~l~~~~~~~~~~~~g~d~imgl~L~~GGHLTHG~~~n 189 (493)
T PRK13580 110 FGAEHAYVQPHSGADANLVAFWAILAHKVEAPALSKLGAKTVNDLTEEEWEELRAELGNQRLLGMSLDSGGHLTHGFRPN 189 (493)
T ss_pred HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCC
T ss_conf 38985032778760778999999860002486422334333232330122222024678868705888786633699656
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCC
Q ss_conf 33333220136658323565989999999860466789705524353637999988641797899186201244320001
Q gi|254780349|r 141 MSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQH 220 (433)
Q Consensus 141 ~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~ 220 (433)
++|++|++++|++|++++.||||+++++|+++||||||+|+|+|||++||++||||||+|||+||+|+||++||||||+|
T Consensus 190 ~sg~~~~~~~Y~vd~et~~IDyD~~~~~A~~~kPKlII~G~SaYpr~idf~~freIAdeVGA~LmaDiAHiaGLVA~g~~ 269 (493)
T PRK13580 190 ISGKMFRQRSYGVDPDTGLLDYDEIAALAREFKPLVLVAGYSAYPRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVF 269 (493)
T ss_pred CCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCC
T ss_conf 34226887875366334840899999999974998899776246564487999999997197898105667677642545
Q ss_pred C---CCCCCCCEEEECCCCCCCCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
Q ss_conf 2---3220023567404565225674489833620565016646543223445566689999999973564899999999
Q gi|254780349|r 221 P---SPVPHCHIVTTTTHKSLRGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIV 297 (433)
Q Consensus 221 ~---~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv 297 (433)
| |||+||||||+||||||||||||||||++ |++++||++| ||+|||||+|+||||||||+||++|+|++|++|||
T Consensus 270 ~~h~sP~~~ADvVTtTTHKTLrGPRGGiIl~~~-e~~~~Id~av-Pg~QGGP~~h~IAakAvaf~EA~~peFk~Y~~qVv 347 (493)
T PRK13580 270 TGDEDPVPHADIVTTTTHKTLRGPRGGLVLAKK-EYAEAVDKGC-PLVLGGPLPHVMAAKAVALAEARTPDFKKYAHRVV 347 (493)
T ss_pred CCCCCCCCCCCEEECCCCCCCCCCCCCEEEECH-HHHHHHCCCC-CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_conf 689995133515751234456788850688464-7787651038-75468727769999999999972777899999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHC
Q ss_conf 88899999986168523345888981263166556767999998885671880378998999988898512246667307
Q gi|254780349|r 298 LNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTR 377 (433)
Q Consensus 298 ~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtr 377 (433)
+|||+||++|.++||+|++|||||||||||++++|++|++++++||++||+||||+|||||++|++|||||||||++|||
T Consensus 348 ~NAkaLA~~L~~~G~~vvsGGTdnHlvLvDl~~~g~tG~~ae~~Le~~gI~vNKN~iP~D~~~p~~~SGIRiGtpa~TtR 427 (493)
T PRK13580 348 DNARALAEGFLKRGARLVTGGTDNHLLLIDVTSFGLTGRQAEDALLDVGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTL 427 (493)
T ss_pred HHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEECCHHHHHC
T ss_conf 99999999999889948528888775888567789988999999987793871688989998898886411166667618
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCC------------CCHHHHHHHHHHHHHHHHHHCCCC-CCCH
Q ss_conf 999899999999999996025776------------211799999999999999708799-9997
Q gi|254780349|r 378 GFKEKDFEYIGELIAQILDGSSSD------------EENHSLELTVLHKVQEFVHCFPIY-DFSA 429 (433)
Q Consensus 378 G~~e~em~~iA~li~~~L~~~~~~------------~~~~~~~~~ir~~V~~l~~~fPiy-~~~~ 429 (433)
||+|+||++||+||+++|+..... ..++.++.++|++|.+||.+||+| ++|.
T Consensus 428 Gm~e~em~~ia~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~vr~~V~~L~~~FPlYp~ld~ 492 (493)
T PRK13580 428 GMGSDEMDEVAELIVKVLRNTTPGRTAEGGPSKAKYELPEGIAQEVRARVAELLARFPLYPEIDL 492 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99989999999999999955242335555432123457899999999999999984899998888
No 4
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=0 Score=1169.12 Aligned_cols=414 Identities=61% Similarity=1.018 Sum_probs=405.9
Q ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 76469785899999999999999838881043010298999983051028865798887533600679999999999999
Q gi|254780349|r 10 FQQSLIESDPDVFSLIGQESCRQNDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAK 89 (433)
Q Consensus 10 ~~~~l~~~Dpei~~~i~~e~~rq~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~ 89 (433)
+...|++.||||+++|++|.+||+++||||||||++||+|+++++|+|+|||||||||+|||+||+++|+||.||++|||
T Consensus 2 ~~~~l~~~D~ei~~~i~~E~~rq~~~l~LIaSEN~~S~~v~~a~gS~l~nkYaEG~pg~RyY~G~~~iD~iE~la~~ra~ 81 (415)
T PRK00011 2 FMMNLADYDPEIFEAIEKELKRQEEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAK 81 (415)
T ss_pred CCCCHHHHCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 46565341999999999999999829648537774799999986472227577889984245665269999999999999
Q ss_pred HHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 87188630100001679999999983154874881233448411147665433333220136658323565989999999
Q gi|254780349|r 90 KLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLA 169 (433)
Q Consensus 90 ~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a 169 (433)
+||+++|||||||||++||++||+||++|||+||+|++++|||||||+++++++++|++++|++|++++.||||++++++
T Consensus 82 ~lF~a~~anVqp~SGs~AN~av~~all~PGD~im~l~l~~GGHltHg~~~~~~~~~~~~~~y~~d~~~~~IDyd~~~~~a 161 (415)
T PRK00011 82 KLFGAEYANVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLA 161 (415)
T ss_pred HHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHH
T ss_conf 98389860567786399999999996278985876686667876578675544652478986786434816799999999
Q ss_pred HHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEEEEC
Q ss_conf 86046678970552435363799998864179789918620124432000123220023567404565225674489833
Q gi|254780349|r 170 IEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHIVTTTTHKSLRGPRGGLIMTN 249 (433)
Q Consensus 170 ~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~ 249 (433)
+++||||||+|+|+|||++||++||||||+|||+||+|+||++||||||+|||||++|||||+|||||||||||||||||
T Consensus 162 ~~~kPklIi~G~S~y~r~~d~~~~reIad~vgA~l~~D~aHi~GLIA~g~~~~Pl~~ADvvt~tTHKTlrGPrGGiIl~~ 241 (415)
T PRK00011 162 LEHKPKLIIAGASAYSRPIDFKKFREIADEVGAYLMVDMAHIAGLVAAGVHPNPVPHADVVTTTTHKTLRGPRGGLILTN 241 (415)
T ss_pred HHHCCCEEEECCCCCCCCCCHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEC
T ss_conf 86099889964613533128899999999709889945355666664333799667756885453346789886079734
Q ss_pred CCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCC
Q ss_conf 62056501664654322344556668999999997356489999999988899999986168523345888981263166
Q gi|254780349|r 250 HADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLR 329 (433)
Q Consensus 250 ~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~ 329 (433)
+ |++++||++||||+|||||+|+||||||||+|+++++|++|++|||+|||+||++|.++||+|++|||||||||||++
T Consensus 242 ~-e~~~kId~aVFPg~qggph~h~iAa~Aval~Ea~~~~f~~Ya~qVv~NAk~La~~L~~~G~~vv~ggTdnHlvlvdl~ 320 (415)
T PRK00011 242 E-ELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALQERGFKVVSGGTDNHLVLVDLR 320 (415)
T ss_pred C-HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEECC
T ss_conf 0-666665412075314680477899999999998474189999999999999999997689779717987744776456
Q ss_pred CCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 55676799999888567188037899899998889851224666730799989999999999999602577621179999
Q gi|254780349|r 330 SKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDGSSSDEENHSLEL 409 (433)
Q Consensus 330 ~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~~~~~~~~~~~~~ 409 (433)
++|++|++++++||++||+||||+||||+++|+.|||||||||++|||||+|+||++||+||+++|+.. ++...+.
T Consensus 321 ~~g~~G~~a~~~Le~~gI~vNkn~iP~d~~~~~~~SGiRiGt~a~TtrG~~e~em~~ia~~I~~~l~~~----~d~~~~~ 396 (415)
T PRK00011 321 KKGLTGKDAEAALEEANITVNKNAIPFDPRSPFVTSGIRIGTPAITTRGFKEAEMEEIAELIADVLDNP----EDEAVLE 396 (415)
T ss_pred CCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCC----CCHHHHH
T ss_conf 456889999999998590875587989999988886014367889748998899999999999998378----9889999
Q ss_pred HHHHHHHHHHHHCCCCCCC
Q ss_conf 9999999999708799999
Q gi|254780349|r 410 TVLHKVQEFVHCFPIYDFS 428 (433)
Q Consensus 410 ~ir~~V~~l~~~fPiy~~~ 428 (433)
+||.+|.+||.+||+|.|.
T Consensus 397 ~ir~eV~~L~~~fP~y~~~ 415 (415)
T PRK00011 397 EVKEEVKELCKRFPLYKYL 415 (415)
T ss_pred HHHHHHHHHHHHCCCCCCC
T ss_conf 9999999999848998889
No 5
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=0 Score=1156.86 Aligned_cols=416 Identities=51% Similarity=0.832 Sum_probs=401.6
Q ss_pred HHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 64697858999999999999998388810430102989999830510288657988875336006799999999999998
Q gi|254780349|r 11 QQSLIESDPDVFSLIGQESCRQNDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKK 90 (433)
Q Consensus 11 ~~~l~~~Dpei~~~i~~e~~rq~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~ 90 (433)
+++|++.||||+++|++|..||+++|+||||||++||+|+++++|+|+|||||||||+|||+||+++|+||.||++||++
T Consensus 9 ~~~l~~~Dpei~~~i~~E~~RQ~~~l~LIASEN~~S~~v~~a~gS~ltnkYaEGyPg~Ryy~G~e~iD~iE~la~~ra~~ 88 (450)
T PTZ00094 9 NKSLQEHDPEIYELIEKEKDRQREGLELIASENLTSRAVLECLGSVFTNKYAEGYPGNRYYGGTEVVDKIENLCQKRALA 88 (450)
T ss_pred CCCHHHHCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 98657749999999999999987792697426757999999857742374558899844546642599999999999999
Q ss_pred HCCCCC----EECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 718863----0100001679999999983154874881233448411147-----6654333332201366583235659
Q gi|254780349|r 91 LFNVNF----VNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHG-----SSVNMSGKWFKAIPYNVRKEDGLLD 161 (433)
Q Consensus 91 lF~a~~----anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg-----~~~~~~g~~~~~~~y~~d~~~~~ID 161 (433)
|||++| ||||||||++||++||+||++|||+||+|++++||||||| .+++++|++|++++|++|++ +.||
T Consensus 89 lF~~~~~~wgaNVqp~SGs~AN~av~~all~pGD~im~l~l~~GGHltHG~~~~~~~v~~sg~~~~~~~Y~vd~~-~~ID 167 (450)
T PTZ00094 89 AFNLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIFFESLPYQVNEE-GLID 167 (450)
T ss_pred HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC-CCCC
T ss_conf 838985436610576866999999999970799979984356688655433467777540134555677324648-9748
Q ss_pred HHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCC
Q ss_conf 89999999860466789705524353637999988641797899186201244320001232200235674045652256
Q gi|254780349|r 162 MHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHIVTTTTHKSLRGP 241 (433)
Q Consensus 162 ~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt~sTHKtl~GP 241 (433)
||+++++++++||||||+|+|+|||++||++||+|||++||+||+|+||++||||||+|||||+||||||+|||||||||
T Consensus 168 yd~~~~~a~~~kPklIi~G~Say~r~id~k~~reIad~vGA~l~~D~AHiaGLIAgg~~psP~~~ADvVT~TTHKTLrGP 247 (450)
T PTZ00094 168 YDKLEKLAKAFRPKLIIAGASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGP 247 (450)
T ss_pred HHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCC
T ss_conf 99999999861998799888254254387999999997399899631444443204557984345504752222347789
Q ss_pred CCEEEEECC---CCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 744898336---20565016646543223445566689999999973564899999999888999999861685233458
Q gi|254780349|r 242 RGGLIMTNH---ADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGG 318 (433)
Q Consensus 242 rgGiI~~~~---~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~gg 318 (433)
||||||||+ ++++++||++||||+|||||+|+||||||||+||++|+|++|++||++|||+||++|.++||+|++||
T Consensus 248 rGGiIl~~k~~~~e~~~kId~aVFPg~qggph~h~IAa~Ava~~Ea~~~efk~Ya~qVv~NAkaLa~~L~~~G~~vvsgg 327 (450)
T PTZ00094 248 RSGMIFFRKKIRPDIESKINQAVFPGLQGGPHFHQIAAIAVQLKEVCSPEWKEYAKQVVDNAKALAAELEKRGFDLVTGG 327 (450)
T ss_pred CCEEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
T ss_conf 84289844664089999854512885446777879999999999975767999999999999999999997899695089
Q ss_pred CCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 88981263166556767999998885671880378998999988898512246667307999899999999999996025
Q gi|254780349|r 319 TDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDGS 398 (433)
Q Consensus 319 Td~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~~ 398 (433)
|||||||||++++|++|++++++||++||++|||+||||+ +|++|||||||||++|||||+|+||++||+||.++|+..
T Consensus 328 TdnHlvlvDl~~~g~~G~~ae~~Le~~gI~~NkN~iP~D~-~~~~~SGiRiGT~a~TtrGm~e~em~~ia~lI~~~i~~~ 406 (450)
T PTZ00094 328 TDNHLILWNLRPFGITGSKVEKLLDAVNISVNKNTIPGDK-SALAPSGIRLGTPALTSRGAVEEDFEFVADFLDRAVKLA 406 (450)
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHCCEEECCCCCCCCC-CCCCCCEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9762799977778999999999998749387478799999-999987033167788838998899999999999999999
Q ss_pred CCC--------------CCHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 776--------------211799999999999999708799999
Q gi|254780349|r 399 SSD--------------EENHSLELTVLHKVQEFVHCFPIYDFS 428 (433)
Q Consensus 399 ~~~--------------~~~~~~~~~ir~~V~~l~~~fPiy~~~ 428 (433)
.+. .++...+.+||++|.+||.+||+|++|
T Consensus 407 ~~~~~~~~~~~~~f~~~~~~~~~i~~lr~~V~~~~~~fp~pg~~ 450 (450)
T PTZ00094 407 QDIQKEVGKKLVDFVKALEASEDIQQLRKEVVEFASQFPIPGLD 450 (450)
T ss_pred HHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 98766501248889862045599999999999999729999999
No 6
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=100.00 E-value=0 Score=1123.69 Aligned_cols=399 Identities=58% Similarity=0.978 Sum_probs=390.4
Q ss_pred HHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 85899999999999999838881043010298999983051028865798887533600679999999999999871886
Q gi|254780349|r 16 ESDPDVFSLIGQESCRQNDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVN 95 (433)
Q Consensus 16 ~~Dpei~~~i~~e~~rq~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~ 95 (433)
+.||||+++|++|.+||+++||||||||++||+|+++++|+|+|||||||||+|||+||+++|+||.||++|||+||+++
T Consensus 2 e~D~ei~~~i~~E~~rq~~~l~LIaSEN~~S~~v~~a~gS~ltnkYaeG~pg~Ryy~G~~~iD~iE~la~~rak~LF~a~ 81 (402)
T cd00378 2 DVDPEIAEIIKKENERQRETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE 81 (402)
T ss_pred CCCHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 86889999999999999809647557664799999985673015476889986466766259999999999999983898
Q ss_pred CEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 301000016799999999831548748812334484111476--654333332201366583235659899999998604
Q gi|254780349|r 96 FVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGS--SVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYN 173 (433)
Q Consensus 96 ~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~--~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~k 173 (433)
|||||||||++||++||+||++|||+||+|++++|||||||+ +++++|++|++++|++|++++.||||+++++++++|
T Consensus 82 ~anVqp~SGs~AN~av~~all~pGD~il~l~l~~GGHltHg~~~~v~~~g~~~~~~~Y~vd~~~~~IDyd~~~~~a~~~k 161 (402)
T cd00378 82 YANVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFK 161 (402)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 74758787399999999997279998998664347775667787720213567889632455658718999999998659
Q ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCH
Q ss_conf 66789705524353637999988641797899186201244320001232200235674045652256744898336205
Q gi|254780349|r 174 PKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHIVTTTTHKSLRGPRGGLIMTNHADL 253 (433)
Q Consensus 174 PklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~e~ 253 (433)
|||||+|+|+|||++||++||+|||++||+||||+||++||||||+|||||++|||||+|||||||||||||||||++++
T Consensus 162 PklIi~G~S~y~r~~d~~~~reIad~vgA~l~~D~aHi~GLIA~g~~p~Pl~~ADvvt~tTHKTlrGPrGGiIl~~~~~~ 241 (402)
T cd00378 162 PKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRGGLILTRKGEL 241 (402)
T ss_pred CCEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHEECCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCHHH
T ss_conf 96999777156565588999999987098898550123443035657997687657744643457899840899542789
Q ss_pred HHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCC
Q ss_conf 65016646543223445566689999999973564899999999888999999861685233458889812631665567
Q gi|254780349|r 254 AKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRM 333 (433)
Q Consensus 254 ~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~ 333 (433)
+++||++||||+|||||+|+||||||||+|+++|+|++|++|||+|||+||++|.++||+|++|||||||||||++++++
T Consensus 242 ~~kId~avfPg~qggph~h~iAa~Aval~Ea~~~~f~~Ya~qVv~NAkaLA~~L~~~G~~vv~ggTd~H~vlvd~~~~g~ 321 (402)
T cd00378 242 AKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVVSGGTDNHLVLVDLRPKGI 321 (402)
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCC
T ss_conf 98854650986446745667899999999986866899999999999999999985894797489988779996664568
Q ss_pred CHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 67999998885671880378998999988898512246667307999899999999999996025776211799999999
Q gi|254780349|r 334 TGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDGSSSDEENHSLELTVLH 413 (433)
Q Consensus 334 ~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~~~~~~~~~~~~~~ir~ 413 (433)
+|++++++|+++||+||||+||+|+++|+.|||||||||++|||||+|+||++||+||+++|+... +.....+||+
T Consensus 322 ~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~sGiRiGT~a~T~rG~~e~em~~ia~lI~~~l~~~~----d~~~~~~v~~ 397 (402)
T cd00378 322 TGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKDAE----DVAVAEEVRK 397 (402)
T ss_pred CHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCC----CHHHHHHHHH
T ss_conf 999999999984908754748899999999976164778998589988999999999999981789----8899999999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780349|r 414 KVQEF 418 (433)
Q Consensus 414 ~V~~l 418 (433)
+|.+|
T Consensus 398 ~V~~L 402 (402)
T cd00378 398 EVAEL 402 (402)
T ss_pred HHHHC
T ss_conf 99759
No 7
>pfam00464 SHMT Serine hydroxymethyltransferase.
Probab=100.00 E-value=0 Score=1117.16 Aligned_cols=378 Identities=60% Similarity=0.987 Sum_probs=374.7
Q ss_pred HHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 97858999999999999998388810430102989999830510288657988875336006799999999999998718
Q gi|254780349|r 14 LIESDPDVFSLIGQESCRQNDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFN 93 (433)
Q Consensus 14 l~~~Dpei~~~i~~e~~rq~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~ 93 (433)
|++.||||+++|++|.+||+++||||||||++||+|+++++|+|+|||||||||+|||+||+++|+||.||++|||+||+
T Consensus 1 l~~~D~ei~~~i~~E~~rq~~~l~LIASEN~~S~~v~~a~gS~ltnkYaEG~pg~Ryy~G~e~iD~iE~la~~rak~lF~ 80 (380)
T pfam00464 1 LSDSDPEIFDIIKKEKERQREGIELIASENFTSRAVMEALGSVLTNKYAEGYPGKRYYGGCEYVDEVETLAQDRAKELFG 80 (380)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 95429999999999999998295475377757999999855731264658799843346763599999999999999839
Q ss_pred CCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 86301000016799999999831548748812334484111476654333332201366583235659899999998604
Q gi|254780349|r 94 VNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYN 173 (433)
Q Consensus 94 a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~k 173 (433)
|+|||||||||++||++||+||++|||+||+|++++|||||||.+++++|++|++++|++|++++.||||+++++++++|
T Consensus 81 a~~anVqp~SGs~An~av~~all~PGD~il~l~l~~GGHltHg~~~~~~g~~~~~~~Y~~d~~~~~ID~d~l~~~a~~~k 160 (380)
T pfam00464 81 LDGVNVQPLSGSQANLAVYTALLNPGDRIMGLDLPHGGHLTHGYPVNFSGKFFESMPYGVDPDTGLIDYDQLEKNAKLFK 160 (380)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEECCEEEEEECCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 97635177876999999999983799989953677775456798656201146778743464548668999999999709
Q ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEEEECC--C
Q ss_conf 66789705524353637999988641797899186201244320001232200235674045652256744898336--2
Q gi|254780349|r 174 PKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHIVTTTTHKSLRGPRGGLIMTNH--A 251 (433)
Q Consensus 174 PklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~--~ 251 (433)
|||||+|+|+|||++||++||||||++||+||||+||++||||||+|||||+||||||+|||||||||||||||||+ +
T Consensus 161 PklIi~G~Say~r~~d~~~~reIad~vgA~l~~D~aH~~GLIA~g~~p~Pl~~ADvvt~tTHKTlrGPrGGiIl~~~~~~ 240 (380)
T pfam00464 161 PKLIVAGTSAYSRLIDYARFREIADEVGAYLMVDMAHIAGLVAAGVIPSPFPYAHVVTTTTHKTLRGPRGGMIFFREILY 240 (380)
T ss_pred CCEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCHH
T ss_conf 98899874004364488999999975098899863777777742437995466657853545667899851798378379
Q ss_pred CHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC
Q ss_conf 05650166465432234455666899999999735648999999998889999998616852334588898126316655
Q gi|254780349|r 252 DLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSK 331 (433)
Q Consensus 252 e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~ 331 (433)
+++++||++||||+|||||+|+||||||||+|+++++|++|++|||+|||+||++|.++||+|++|||||||||||++++
T Consensus 241 e~~~kId~avFPg~qggp~~h~iAa~Aval~Ea~~~~f~~Ya~qVv~NAk~La~~L~~~G~~vv~ggTd~H~vlvdl~~~ 320 (380)
T pfam00464 241 ELEKKINSAVFPGLQGGPLNHVIAAKAVALKQALTPEFKVYQQQVLKNAKALAEALKERGYKLVSGGTDNHLVLVDLRPK 320 (380)
T ss_pred HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEECCCC
T ss_conf 99999714048876677006579999999999848529999999999999999999978883577999876899977666
Q ss_pred CCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHH
Q ss_conf 676799999888567188037899899998889851224666730799989999999999
Q gi|254780349|r 332 RMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELI 391 (433)
Q Consensus 332 ~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li 391 (433)
|++|++++++||++||+||||+|||||++|+.|||||||||++|||||+|+||++||+||
T Consensus 321 g~~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~sGiRiGt~~~T~rG~~e~em~~ia~~I 380 (380)
T pfam00464 321 GLDGKRAEKALERANITANKNTIPGDPKSPFVTSGLRLGTPALTSRGFGEADFEEVAGYI 380 (380)
T ss_pred CCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHHHHC
T ss_conf 999999999999769287888598999999888842657778983899889999999659
No 8
>KOG2467 consensus
Probab=100.00 E-value=0 Score=1057.06 Aligned_cols=425 Identities=48% Similarity=0.787 Sum_probs=406.7
Q ss_pred CCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 65203677646978589999999999999983888104301029899998305102886579888753360067999999
Q gi|254780349|r 3 IICKNRFFQQSLIESDPDVFSLIGQESCRQNDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIEN 82 (433)
Q Consensus 3 ~~~~~~~~~~~l~~~Dpei~~~i~~e~~rq~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~ 82 (433)
......+++.+|.+.||||+++|++|..||+++|+|||||||+|.+|++++||+|+|||||||||+|||||+||||+||.
T Consensus 10 ~~~~~~~~~~~l~~~DPev~~ii~~Ek~RQ~~gieLIaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~ 89 (477)
T KOG2467 10 DAAVIKLGNTPLEEVDPEVHDIIEKEKERQKRGIELIASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIEL 89 (477)
T ss_pred HHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 45566650486122285799999988886442416751355117999998757750655568886513375357899999
Q ss_pred HHHHHHHHHCCCCC----EECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC-----CCCCCCCCCCCCCCCCC
Q ss_conf 99999998718863----0100001679999999983154874881233448411147-----66543333322013665
Q gi|254780349|r 83 IAIERAKKLFNVNF----VNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHG-----SSVNMSGKWFKAIPYNV 153 (433)
Q Consensus 83 la~~~a~~lF~a~~----anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg-----~~~~~~g~~~~~~~y~~ 153 (433)
||++||+++|+++. +||||+|||+||++||.|+++|+|+||++++++||||||| ++++..+.+|++.||.|
T Consensus 90 LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv 169 (477)
T KOG2467 90 LCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKV 169 (477)
T ss_pred HHHHHHHHHHCCCHHHCCEEECCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEE
T ss_conf 99999999809988887333002789830567875414877713403579887555640168854224664300486102
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEEC
Q ss_conf 83235659899999998604667897055243536379999886417978991862012443200012322002356740
Q gi|254780349|r 154 RKEDGLLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHIVTTT 233 (433)
Q Consensus 154 d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt~s 233 (433)
|+++|.||||.+|+.|..+|||+||||.|+|+|.+||+|||+|||++||+||+||||++||||+|+.||||+||||||+|
T Consensus 170 ~~~TG~IDYD~Le~~A~~frPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTT 249 (477)
T KOG2467 170 DPSTGYIDYDKLEKTATLFRPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTT 249 (477)
T ss_pred CCCCCCEEHHHHHHHHHHCCCCEEEECCCCCHHHCCHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCCCEEECC
T ss_conf 79878130688888887518737995363213231389999998752806641356677777526679964201246413
Q ss_pred CCCCCCCCCCEEEEECCC--------------CHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 456522567448983362--------------056501664654322344556668999999997356489999999988
Q gi|254780349|r 234 THKSLRGPRGGLIMTNHA--------------DLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLN 299 (433)
Q Consensus 234 THKtl~GPrgGiI~~~~~--------------e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~N 299 (433)
|||+||||||||||+|+. ++.+|||.+||||+|||||+|+|+|+||||+.|.+|+|++|++||++|
T Consensus 250 THKsLRGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~N 329 (477)
T KOG2467 250 THKSLRGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKN 329 (477)
T ss_pred CCCCCCCCCCEEEEEECCCCCCCCCCCCCCEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 43455687631689832677678788976401266530122266556898733589999999860787799999999999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCC
Q ss_conf 89999998616852334588898126316655676799999888567188037899899998889851224666730799
Q gi|254780349|r 300 SQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGF 379 (433)
Q Consensus 300 A~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~ 379 (433)
|++||++|.++||++|+||||||+||||||++|+||..+|+.||.++|++|||+||+| ++++.|+||||||||+|+|||
T Consensus 330 akala~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD-~Sal~PgGiRiGtPAmTsRG~ 408 (477)
T KOG2467 330 AKALASALISRGYKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGD-KSALSPGGIRIGTPAMTSRGF 408 (477)
T ss_pred HHHHHHHHHHCCCEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCC-CCCCCCCCEECCCHHHCCCCC
T ss_conf 9999999997296674078665279996564677508999999875413337767787-445588843316612213676
Q ss_pred CHHHHHHHHHHHHHHHHCCCCC-------------------CCHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 9899999999999996025776-------------------211799999999999999708799999
Q gi|254780349|r 380 KEKDFEYIGELIAQILDGSSSD-------------------EENHSLELTVLHKVQEFVHCFPIYDFS 428 (433)
Q Consensus 380 ~e~em~~iA~li~~~L~~~~~~-------------------~~~~~~~~~ir~~V~~l~~~fPiy~~~ 428 (433)
.|+||++|+++|.++++..... +...+.++++|++|.+|+.+||+|+|+
T Consensus 409 ~e~df~~v~~fi~~av~i~~~~~~~~~~~~lkdf~~~~~~~~~~~~~v~~Lr~~Ve~fa~~fp~pg~~ 476 (477)
T KOG2467 409 GEEDFEKVADFIDRAVKIALEIQKEAGGKKLKDFKKFLSENKVMSEEVAELRKRVEEFAGQFPMPGFE 476 (477)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 68889999999999999999997542643188899886257304799999999999998618988777
No 9
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.93 E-value=1.6e-22 Score=177.25 Aligned_cols=319 Identities=23% Similarity=0.276 Sum_probs=214.7
Q ss_pred CHHHHHHHHCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 98999983051028865798887533600-67999999999999987188630100001679999999983154874881
Q gi|254780349|r 46 SRAVLEAQGSILTNKYAEGYPSKRYYGGC-QYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMG 124 (433)
Q Consensus 46 S~~v~~~l~S~l~nkyaeG~pg~ryy~G~-~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~ 124 (433)
+|.++++..-- ..||..|+.+.|.+.|+ +...++| ++..++||.+.|-+- .||..||++++.+|.+|||.|+.
T Consensus 17 ~p~~~~a~~~a-~~~~G~g~~~sr~~~G~~~~~~~lE----~~la~~~g~e~al~~-~sG~~an~~~i~~l~~~~d~i~~ 90 (349)
T cd06454 17 HPEVIEAAKEA-LDKYGVGAGGSRLISGTSDLHEELE----EELAEFHGKEAALVF-SSGYAANDGVLSTLAGKGDLIIS 90 (349)
T ss_pred CHHHHHHHHHH-HHHCCCCCCCCCCCCCCHHHHHHHH----HHHHHHHCCCEEEEE-CCHHHHHHHHHHHCCCCCCEEEE
T ss_conf 99999999999-9973998887673647879999999----999998699819995-57078778888620578977974
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC---CCEEEEECCCCCC---CCCHHHHHHHHH
Q ss_conf 2334484111476654333332201366583235659899999998604---6678970552435---363799998864
Q gi|254780349|r 125 LSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYN---PKLIIVGGTAYSR---VWDWERFRSIAD 198 (433)
Q Consensus 125 ~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~k---PklIi~G~S~y~~---~~d~~~l~eIa~ 198 (433)
+.+-|.|--.-...++ -....|+- -|++.+++++++.+ ++.+|+--+.|+. ..|++++.+||+
T Consensus 91 ---D~~~H~si~~G~~~s~--a~~~~f~H------nd~~~L~~~l~~~~~~~~~~~iv~egv~Sm~Gd~apL~~l~~l~~ 159 (349)
T cd06454 91 ---DSLNHASIIDGIRLSG--AKKRIFKH------NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAK 159 (349)
T ss_pred ---CCCCCHHHHHHHHCCC--CCEEEECC------CCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf ---1534372886365244--64799789------999999999985322589769996576788877679899999999
Q ss_pred HCCCEEEECCCCHHHHHH---HHC--CCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCHHHHCCHHHCHHHHHHHH-HH
Q ss_conf 179789918620124432---000--123220023567404565225674489833620565016646543223445-56
Q gi|254780349|r 199 SIGAYLMADISHISGLVV---GGQ--HPSPVPHCHIVTTTTHKSLRGPRGGLIMTNHADLAKKINSAIFPGLQGGPF-MH 272 (433)
Q Consensus 199 ~~ga~l~~D~aH~~GLIa---~g~--~~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~-~~ 272 (433)
++|++|++|.||..|.+- .|. +....+..|++++|.+|.| |..||+|++++ ++.+.+...--|..-++.. +.
T Consensus 160 ~~~~~livDeAH~~Gv~G~~G~G~~~~~~~~~~~di~~~tlsKa~-G~~Gg~v~g~~-~~i~~l~~~~~~~i~s~~l~p~ 237 (349)
T cd06454 160 KYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAF-GAVGGYIAGSK-ELIDYLRSYARGFIFSTSLPPA 237 (349)
T ss_pred HHCCEEEEECHHHCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCC-CCCCCEEECCH-HHHHHHHHHCCCCCCCCCCCHH
T ss_conf 829789972323317415888767886589886679985365434-67771242535-6899998619885777776899
Q ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECC
Q ss_conf 66899999999735648999999998889999998616852334588898126316655676799999888567188037
Q gi|254780349|r 273 SIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKN 352 (433)
Q Consensus 273 ~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn 352 (433)
.+++...++ |.++ ...+..++.-+|++.|.+.|.+.|+++. ++++|.|..-+........++.+.|.+.||.|+--
T Consensus 238 ~~aa~~~al-~~l~-~~~~~~~~L~~~~~~~~~~l~~~g~~i~--~~~~~~i~~~~~~~~~~a~~~~~~L~~~Gi~v~~~ 313 (349)
T cd06454 238 VAAAALAAL-EVLQ-GGPERRERLQENVRYLRRGLKELGFPVG--GSPSHIIPPLIGDDPAKAVAFSDALLERGIYVQAI 313 (349)
T ss_pred HHHHHHHHH-HHHH-CCCHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 999999999-9986-3958899999999999999997699757--99997279998699999999999998879628637
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 899899998889851224666730799989999999999999
Q gi|254780349|r 353 SIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQI 394 (433)
Q Consensus 353 ~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~ 394 (433)
.-|- -|...+.||+...+ ...++|++++.+.+.++
T Consensus 314 ~~Pt---vp~~~~~lRi~~sa----~ht~edId~li~~l~ev 348 (349)
T cd06454 314 RYPT---VPRGTARLRISLSA----AHTKEDIDRLLEALKEV 348 (349)
T ss_pred CCCC---CCCCCCEEEEEECC----CCCHHHHHHHHHHHHHH
T ss_conf 9897---89998359998687----79999999999999974
No 10
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.88 E-value=8.5e-20 Score=158.31 Aligned_cols=327 Identities=19% Similarity=0.221 Sum_probs=224.3
Q ss_pred CCCCCCCC----CHHHHHHHHCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHH
Q ss_conf 10430102----98999983051028865798887533600-67999999999999987188630100001679999999
Q gi|254780349|r 38 LIASENIV----SRAVLEAQGSILTNKYAEGYPSKRYYGGC-QYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVF 112 (433)
Q Consensus 38 LiASEN~~----S~~v~~~l~S~l~nkyaeG~pg~ryy~G~-~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~ 112 (433)
..+|.||. +|.+.++...-+ .+|--|..+.|-..|+ +...++| ++..++||.+-|-+=+ ||..||++++
T Consensus 43 nFsSndYLGL~~hp~v~~a~~~a~-~~yG~g~~~SRl~~G~~~~h~~LE----~~lA~~~g~e~allf~-SGy~An~~~i 116 (387)
T PRK05958 43 NFASNDYLGLANHPELIAAAQQAA-RRYGVGSGGSRLVTGNSPAHEALE----AELAEWFGAERALLFS-SGYAANLAVL 116 (387)
T ss_pred EEECCCCCCCCCCHHHHHHHHHHH-HHHCCCCCCCCHHCCCCHHHHHHH----HHHHHHHCCCCEEEEC-CCHHHHHHHH
T ss_conf 856654247789999999999999-983898865632306869999999----9999986899679645-5238666566
Q ss_pred HHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC--CEEEEECCCCCC---C
Q ss_conf 98315487488123344841114766543333322013665832356598999999986046--678970552435---3
Q gi|254780349|r 113 LALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNP--KLIIVGGTAYSR---V 187 (433)
Q Consensus 113 ~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kP--klIi~G~S~y~~---~ 187 (433)
.+|.+|+|.|+.-.+. |-|--.-...++- ++..|.- -|++.++++++++++ ++|++. +.|+. .
T Consensus 117 ~al~~~~d~ii~D~~~---HaSi~dG~~ls~a--~~~~f~H------nD~~~Le~~L~~~~~~~~~iv~e-gvySMdGd~ 184 (387)
T PRK05958 117 TALVGKGDLIVSDKLN---HASLIDGARLSRA--EVRRYPH------NDVDALEALLAKWRAGRALIVTE-SVFSMDGDL 184 (387)
T ss_pred HHCCCCCCEEEEECCC---CHHHHHHHHHCCC--CEEEECC------CCHHHHHHHHHHCCCCCEEEEEC-CCCCCCCCC
T ss_conf 5327899789971004---6989998872799--2899689------99999999997388987599974-665778876
Q ss_pred CCHHHHHHHHHHCCCEEEECCCCHHHHHHH---HC--CCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCHHHHCCHHHC
Q ss_conf 637999988641797899186201244320---00--1232200235674045652256744898336205650166465
Q gi|254780349|r 188 WDWERFRSIADSIGAYLMADISHISGLVVG---GQ--HPSPVPHCHIVTTTTHKSLRGPRGGLIMTNHADLAKKINSAIF 262 (433)
Q Consensus 188 ~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~---g~--~~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~avf 262 (433)
.|++++.++|++++++|++|-||-.|.+-- |. +.+-.+..|++++|--|.|. -.||+|.+++ ++.+.+....-
T Consensus 185 apL~~i~~L~~~y~~~L~vDeAH~~Gv~G~~G~G~~e~~~~~~~vdi~~gTlsKA~g-s~GG~i~g~~-~~i~~l~~~a~ 262 (387)
T PRK05958 185 APLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAEAAGLAGEIVILVGTLGKALG-SSGAAVLGSE-TLIDYLINRAR 262 (387)
T ss_pred CCHHHHHHHHHHCCEEEEECCHHHCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCC-CCCEEEEECH-HHHHHHHHHCC
T ss_conf 689999999997084788426222263379998489984788886899760544456-7743995078-99999987390
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHH
Q ss_conf 432234-4556668999999997356489999999988899999986168523345888981263166556767999998
Q gi|254780349|r 263 PGLQGG-PFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAESI 341 (433)
Q Consensus 263 Pg~qg~-~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~ 341 (433)
|..-+. .-+..+++...++ +.+. +..+-.++.-+|++.|.+.|.+.|+++ +.++++.+-|-+.+. -...++.+.
T Consensus 263 ~~ifStalpP~~~aa~~~al-~~i~-~~~~~~~~L~~n~~~~~~~l~~~g~~~--~~s~spIipi~ig~~-~~~~~~~~~ 337 (387)
T PRK05958 263 PFIFTTALPPAQAAAARAAL-RILR-EEPERRERLAALIARLRAGLRALGLGL--PDSESAIQPLIVGDN-ERALALAAA 337 (387)
T ss_pred CCCCCCCCCHHHHHHHHHHH-HHHH-CCHHHHHHHHHHHHHHHHHHHHCCCCC--CCCCCCEEEEEECCH-HHHHHHHHH
T ss_conf 20315888779999999999-9986-095999999999999986457539985--899998799996999-999999999
Q ss_pred HHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 342 LGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 342 Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
|.+.||.++--.-|-= |...+.||+...+ ...++|++++.+.+.+++.
T Consensus 338 L~~~Gi~v~~i~~PtV---p~~~~rlRi~i~a----~ht~~dId~l~~~l~e~~~ 385 (387)
T PRK05958 338 LQAQGFWVGAIRPPTV---PAGTSRLRITLTA----AHTEADIDRLLEALAEALA 385 (387)
T ss_pred HHHCCCEEEEECCCCC---CCCCCEEEEEECC----CCCHHHHHHHHHHHHHHHH
T ss_conf 9977952831789988---9998449999787----7999999999999999995
No 11
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.88 E-value=1.2e-19 Score=157.17 Aligned_cols=354 Identities=17% Similarity=0.190 Sum_probs=236.0
Q ss_pred CCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHC---------------------CCCCCCCCCC----CHHHHHHHHCCCC
Q ss_conf 52036776469785899999999999999838---------------------8810430102----9899998305102
Q gi|254780349|r 4 ICKNRFFQQSLIESDPDVFSLIGQESCRQNDE---------------------IQLIASENIV----SRAVLEAQGSILT 58 (433)
Q Consensus 4 ~~~~~~~~~~l~~~Dpei~~~i~~e~~rq~~~---------------------l~LiASEN~~----S~~v~~~l~S~l~ 58 (433)
|.-+.||.+.|.+. -++...|+.++ +-..+|.||. .|.+.++... -.
T Consensus 2 m~~~~~~~~~l~~~-------~~~~lyr~~~~~~~~~~~~~~~~~~~~~~g~~~l~f~SNdYLGLs~~p~v~~a~~~-a~ 73 (410)
T PRK13392 2 MNYDSYFTKELDQL-------HQEGRYRVFADLEREAGSFPRAIDHGPETGKRVTIWCSNDYLGMGQHPDVIGAMVD-AL 73 (410)
T ss_pred CCHHHHHHHHHHHH-------HHCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHH-HH
T ss_conf 89799999999999-------98399876740354678875542025789938989775666577899999999999-99
Q ss_pred CCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHC--CCCEEEECCCCCCCCCCC
Q ss_conf 88657988875336006-799999999999998718863010000167999999998315--487488123344841114
Q gi|254780349|r 59 NKYAEGYPSKRYYGGCQ-YVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMH--PGDSFMGLSLDSGGHLTH 135 (433)
Q Consensus 59 nkyaeG~pg~ryy~G~~-~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~--pGD~Il~~~l~~GGHlsh 135 (433)
.+|--|-.|.|-..|+. ...++| ++..+++|.+-|-+= -||..||++++.+|.+ |||.|+.=.+. |-|-
T Consensus 74 ~~yG~gs~gSrl~~G~~~~h~~LE----~~LA~f~g~e~allf-~SGy~AN~g~i~aL~~~~~~d~i~~D~l~---HaSi 145 (410)
T PRK13392 74 DRYGAGAGGTRNISGTSHEHVLLE----RELADLHGKQSALLF-TSGYVSNDAALSTLARLLPNCLILSDALN---HASM 145 (410)
T ss_pred HHHCCCCCCCCCCCCCHHHHHHHH----HHHHHHHCCCCEEEE-CCHHHHHHHHHHHHHCCCCCCEEEECCCC---CHHH
T ss_conf 980999877585627879999999----999998699929997-66478889999998277999799987312---2889
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---HCCCEEEEECCCCCC---CCCHHHHHHHHHHCCCEEEECCC
Q ss_conf 766543333322013665832356598999999986---046678970552435---36379999886417978991862
Q gi|254780349|r 136 GSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIE---YNPKLIIVGGTAYSR---VWDWERFRSIADSIGAYLMADIS 209 (433)
Q Consensus 136 g~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~---~kPklIi~G~S~y~~---~~d~~~l~eIa~~~ga~l~~D~a 209 (433)
-.-...++ -+...|.- -|++.++++.++ .+|++|+.. ++|+. ..|++++.++|++++|+|++|-|
T Consensus 146 idG~rlS~--a~~~~f~H------nD~~~Le~~L~~~~~~~~~~IvtE-gVfSMdGd~apL~~l~~L~~~y~a~L~VDeA 216 (410)
T PRK13392 146 IEGIRRSG--AEKQVWAH------NDLADLERQLASVDPDRPKLICFE-SCYSMDGDFAPMAAICDLAEKYNAFTYVDEV 216 (410)
T ss_pred HHHHHHCC--CCEEEECC------CCHHHHHHHHHHCCCCCCEEEEEC-CCCCCCCCCCCHHHHHHHHHHHCCEEEEECC
T ss_conf 98787558--95899718------998999999975666785599972-5312478868999999999984959996131
Q ss_pred CHHHHHHH---HC--CCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCHHHHCCHHHCHHHHHHH-HHHHHHHHHHHHHH
Q ss_conf 01244320---00--12322002356740456522567448983362056501664654322344-55666899999999
Q gi|254780349|r 210 HISGLVVG---GQ--HPSPVPHCHIVTTTTHKSLRGPRGGLIMTNHADLAKKINSAIFPGLQGGP-FMHSIAAKAVAFGE 283 (433)
Q Consensus 210 H~~GLIa~---g~--~~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~-~~~~iaa~aval~E 283 (433)
|-.|.+-. |. +....+..||+++|--|+| |-.||+|.+++ ++.+-+...--|..-+.. -+..+++...++.-
T Consensus 217 H~~GvlG~~GrG~~e~~g~~~~vdi~~gTlsKA~-Gs~Ggfv~gs~-~~id~l~~~ar~~IfStalpP~~~aa~~~al~~ 294 (410)
T PRK13392 217 HAVGLYGPRGGGIAERDGLMDRIDMFQGTLSKAF-GCLGGYIAASA-DLVDFVRSFAPGFIFTTALPPPVVAGARAALRH 294 (410)
T ss_pred CCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCC-CCCCEEEECCH-HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 0024135899877997289876679985065412-36760342373-778999873875436667899999999999999
Q ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHH-HHHHHCCEEEECCCCCCCCCCCC
Q ss_conf 73564899999999888999999861685233458889812631665567679999-98885671880378998999988
Q gi|254780349|r 284 ALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAE-SILGRVSITCNKNSIPFDPESPF 362 (433)
Q Consensus 284 a~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~-~~Le~~gI~~Nkn~iP~D~~~~~ 362 (433)
++.+ ..-.++..+|++.|-+.|.+.||++. .+++|++-|-+.+.... ..+. +.|++.||.++--. +|.
T Consensus 295 -l~~~-~~~r~~L~~~~~~lr~~l~~~g~~~~--~s~s~Iipi~ig~~~~a-~~~~~~ll~e~Gi~v~~i~------~Pt 363 (410)
T PRK13392 295 -LKTS-QWERDAHQDRTASLKAKLNANGIPVL--PSPSHIVPVMVGDPEKC-KAISDLLMAEHGIYIQPIN------YPT 363 (410)
T ss_pred -HHCC-HHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCEEEEEECCHHHH-HHHHHHHHHCCCEEEEEEC------CCC
T ss_conf -8719-58899999999999999986799848--99998799997999999-9999999875998998678------883
Q ss_pred CC---CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 89---85122466673079998999999999999960257
Q gi|254780349|r 363 IT---SGIRLGTPSGTTRGFKEKDFEYIGELIAQILDGSS 399 (433)
Q Consensus 363 ~~---sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~~~ 399 (433)
+| +.||+-..+. ..++|++.+.+.+.++-+...
T Consensus 364 VP~g~~rLRi~lsA~----Ht~~dId~l~~~L~~v~~e~g 399 (410)
T PRK13392 364 VPRGTERLRITPSPL----HTDEDIDALVAALVAIWRELA 399 (410)
T ss_pred CCCCCCEEEEEECCC----CCHHHHHHHHHHHHHHHHHCC
T ss_conf 799974498775866----899999999999999999809
No 12
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.88 E-value=8.9e-19 Score=151.21 Aligned_cols=326 Identities=16% Similarity=0.171 Sum_probs=226.6
Q ss_pred CCCCCCCCCCHHHHHHHHCCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC--CEECCCHHHHHHHHHHHH
Q ss_conf 810430102989999830510-28865798887533600679999999999999871886--301000016799999999
Q gi|254780349|r 37 QLIASENIVSRAVLEAQGSIL-TNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVN--FVNVQSHSGSQMNQGVFL 113 (433)
Q Consensus 37 ~LiASEN~~S~~v~~~l~S~l-~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~--~anvqp~SG~~An~av~~ 113 (433)
=|+|.=--+++.|+++++... +.| +.++.+ +-.-+.++.+++|+.+ ++-+-.-||+.|+-+++.
T Consensus 2 L~tPGP~~~~~~V~~Am~~~~~~hR------------~~~F~~-~~~~~~~~L~~~~~~~~~~~v~~~gsgt~a~ea~~~ 68 (356)
T cd06451 2 LLIPGPSNVPPRVLKAMNRPMLGHR------------SPEFLA-LMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALS 68 (356)
T ss_pred CCCCCCCCCCHHHHHHHCCCCCCCC------------CHHHHH-HHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHH
T ss_conf 7758999888999998579998867------------889999-999999999999589998489995770899999998
Q ss_pred HHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEE--CCCCCCCCCHH
Q ss_conf 8315487488123344841114766543333322013665832356598999999986046678970--55243536379
Q gi|254780349|r 114 ALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVG--GTAYSRVWDWE 191 (433)
Q Consensus 114 ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G--~S~y~~~~d~~ 191 (433)
.+++|||+|+.+ ..|+.+....-.+.-...++..+.++. .+.+|++++++.+++.++++|.+- -++.....|++
T Consensus 69 n~~~~~~kvlv~---~~G~fg~r~~~~a~~~g~~~~~i~~~~-~~~~~~~~v~~~l~~~~~~~v~~~h~etstG~~~~l~ 144 (356)
T cd06451 69 NLLEPGDKVLVG---VNGVFGDRWADMAERYGADVDVVEKPW-GEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLE 144 (356)
T ss_pred HCCCCCCCEEEE---EEEECCCCHHHHHHHCCCCEEEEECCC-CCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHH
T ss_conf 526888814788---530405416764411597239986899-9978989999886338965899966536510147758
Q ss_pred HHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCCCCCCC-EEEEECCCCHHHHCCHHH-------
Q ss_conf 99988641797899186201244320001232200--23567404565225674-489833620565016646-------
Q gi|254780349|r 192 RFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSLRGPRG-GLIMTNHADLAKKINSAI------- 261 (433)
Q Consensus 192 ~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~i~~av------- 261 (433)
++.++|+++|+++++|+.+.+|- .|=.++. +|++.++.||-|.||.| |+++.++ +..+++....
T Consensus 145 ~i~~~~~~~~~~~~vDavss~g~-----~~id~~~~giD~~~~ssqK~l~~ppGl~~~~vs~-~a~~~~~~~~~~~~~y~ 218 (356)
T cd06451 145 GIGALAKKHDALLIVDAVSSLGG-----EPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSE-RALERIKKKTKPKGFYF 218 (356)
T ss_pred HHHHHHHHCCEEEEEECCHHHCC-----CCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECH-HHHHHHHHCCCCCCCCC
T ss_conf 89998741572799725311055-----6502566660599976886445899668999889-99999860389987777
Q ss_pred -------CH----HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCEEE-ECC
Q ss_conf -------54----322344556668999999997356489999999988899999986168523345-88898126-316
Q gi|254780349|r 262 -------FP----GLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSG-GTDNHLML-VDL 328 (433)
Q Consensus 262 -------fP----g~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~g-gTd~H~vl-vdl 328 (433)
++ .+-+.|-.+.+.|+..|+.+..+......-++..++++.+-+.|.+.||+++.. .-.+..|. +.+
T Consensus 219 dl~~~~~~~~~~~~~~~Tp~~~~i~al~~AL~~i~~~G~~~~~~r~~~l~~~l~~~l~~lGl~~~~~~~~~S~~vt~~~~ 298 (356)
T cd06451 219 DLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLV 298 (356)
T ss_pred CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEEC
T ss_conf 98999987614898788988068899999999998606589999999999999999997599656893654982799979
Q ss_pred CCCCCCHHHHHH-HHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 655676799999-88856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 329 RSKRMTGKRAES-ILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 329 ~~~~~~G~~a~~-~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
+.+++..+.-+ .+++.||.+-... .....+-+|||.--- ...+|++.+-+.|.++|+
T Consensus 299 -p~g~~~~~~~~~l~~~~~i~i~~g~------g~~~~~~fRIg~mG~----~~~~di~~~l~al~~~Lk 356 (356)
T cd06451 299 -PEGVDGDEVVRRLMKRYNIEIAGGL------GPTAGKVFRIGHMGE----ATREDVLGVLSALEEALK 356 (356)
T ss_pred -CCCCCHHHHHHHHHHHCCEEEECCC------CCCCCCEEEECCCCC----CCHHHHHHHHHHHHHHHC
T ss_conf -9999999999999997899997886------656895898618989----999999999999999859
No 13
>pfam00266 Aminotran_5 Aminotransferase class-V. This domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-.
Probab=99.88 E-value=5e-20 Score=159.90 Aligned_cols=319 Identities=19% Similarity=0.194 Sum_probs=218.5
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHCCCCCE-ECCCHHH-HHHHHHHHHHH-
Q ss_conf 43010298999983051028865798887-53360067999999999999987188630-1000016-79999999983-
Q gi|254780349|r 40 ASENIVSRAVLEAQGSILTNKYAEGYPSK-RYYGGCQYVDDIENIAIERAKKLFNVNFV-NVQSHSG-SQMNQGVFLAL- 115 (433)
Q Consensus 40 ASEN~~S~~v~~~l~S~l~nkyaeG~pg~-ryy~G~~~~d~iE~la~~~a~~lF~a~~a-nvqp~SG-~~An~av~~AL- 115 (433)
|+...++|.|+++...-+.+.|+ -|+. .|+.|.+.-+. -+-+.+...++||++.. +|=..|| +.++-.+..++
T Consensus 6 aattp~~~~V~~~~~~~~~~~~~--np~s~~~~~~~~~~~~-~e~aR~~ia~~lga~~~~~i~ft~~~Te~~n~~~~~~~ 82 (371)
T pfam00266 6 AATTQKPQAVLDALQEYYTDYNG--NVHRGVHHLGKEATQA-YEEAREKVAEFINAPSDEEIIFTSGTTEAINLVAISLG 82 (371)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCC--CCCCCCCHHHHHHHHH-HHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHH
T ss_conf 12368999999999999986488--8565214999999999-99999999997193998979984887899887652345
Q ss_pred --HCCCCEEEECCCCCCCCCCCCCCCC-C-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECC--CCCCCCC
Q ss_conf --1548748812334484111476654-3-33332201366583235659899999998604667897055--2435363
Q gi|254780349|r 116 --MHPGDSFMGLSLDSGGHLTHGSSVN-M-SGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGT--AYSRVWD 189 (433)
Q Consensus 116 --l~pGD~Il~~~l~~GGHlshg~~~~-~-~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S--~y~~~~d 189 (433)
++|||+|+..+.+|..-+ .+.. + .-...++...++++ ++.+|+|++++.+. .++++|.+-.. ......|
T Consensus 83 ~~~~~gd~ii~s~~eh~s~~---~~~~~l~~~~g~~v~~i~~~~-~g~i~~~~l~~~i~-~~t~lv~~~~v~n~tG~~~p 157 (371)
T pfam00266 83 RRLKPGDEILVTEMEHHANL---VPWQELAKRTGATVRVIPVDP-NGLLDLDALEKLLT-PRTKLVAITHVSNVTGTVNP 157 (371)
T ss_pred HCCCCCCEEEEECCCCCCHH---HHHHHHHHHCCCEEEEECCCC-CCCCCHHHHHHHCC-CCCEEEEEECCCCCCCEECH
T ss_conf 31499899999547755236---599998762495699935698-98698999998568-99649999676677882405
Q ss_pred HHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCCCCCCC-EEEEECCCCHHHHCCHHHCHHH-
Q ss_conf 7999988641797899186201244320001232200--23567404565225674-4898336205650166465432-
Q gi|254780349|r 190 WERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSLRGPRG-GLIMTNHADLAKKINSAIFPGL- 265 (433)
Q Consensus 190 ~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~i~~avfPg~- 265 (433)
++++.++|++.|+++++|++|.+|-+ |=.++. +|++++|.|| |.||.| |++..++ ++.+++....+.+.
T Consensus 158 i~~i~~~~~~~g~~~~vDa~q~~g~~-----~id~~~~g~D~~~~s~hK-~~GP~G~G~L~v~~-~~~~~l~p~~~g~~~ 230 (371)
T pfam00266 158 VEEIGKLAHEYGALVVVDAAQAVGHR-----PIDVQALGVDFLAFSGHK-LYGPTGIGVLYGRR-DLLEKLPPWKGGGGM 230 (371)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCCC-----CCCCCCCCCCEEEEECCC-CCCCCCEEEEEECH-HHHHHCCCCCCCCCC
T ss_conf 55699998636917998751236752-----203232436569986555-68998439999815-778457875679984
Q ss_pred --------------------HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---CCC
Q ss_conf --------------------234455666899999999735648999999998889999998616852334588---898
Q gi|254780349|r 266 --------------------QGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGT---DNH 322 (433)
Q Consensus 266 --------------------qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggT---d~H 322 (433)
.|.+....+++++.++....+.....-.+++.+-++.|.+.|.+.+.-.+.+.. -.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~e~GT~n~~~~~~l~~al~~~~~~g~~~i~~~~~~L~~~l~~~L~~~~~~~i~~~~~~~~~~ 310 (371)
T pfam00266 231 IDLVSLLQETTFADAPSKFEAGTPNIAGIIGLGAALDYLAEIGLEAIEKHERELAAYLYERLLAIPGIRLVPAVAERRPS 310 (371)
T ss_pred CCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf 35654222355456144404789987889999999999998198999999999999999998559998994986246688
Q ss_pred EEEECCCCCCCCHHHHHHHHHHCCEEEEC---CCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 12631665567679999988856718803---7899899998889851224666730
Q gi|254780349|r 323 LMLVDLRSKRMTGKRAESILGRVSITCNK---NSIPFDPESPFITSGIRLGTPSGTT 376 (433)
Q Consensus 323 ~vlvdl~~~~~~G~~a~~~Le~~gI~~Nk---n~iP~D~~~~~~~sGiRlGT~aiTt 376 (433)
.+-+.+ .++++.+....|+..||.+.- ++-|.- +.-..+++||++...-||
T Consensus 311 ivsf~~--~~~~~~~~~~~L~~~gI~vs~G~~Cs~~~l-~~~~~~g~iRiS~~~ynT 364 (371)
T pfam00266 311 IISFNF--PGVHPHDVATLLDERGIAVRSGHHCAQPLM-ERLGVHGTLRASLYFYNT 364 (371)
T ss_pred EEEEEE--CCCCHHHHHHHHHHCCEEEECCCCCCCHHH-HHHCCCCEEEEECCCCCC
T ss_conf 899995--990999999997348819976400032444-876799889997688799
No 14
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.87 E-value=4.8e-19 Score=153.08 Aligned_cols=328 Identities=19% Similarity=0.186 Sum_probs=221.0
Q ss_pred CCCCCCCCC----CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHH
Q ss_conf 881043010----2989999830510288657988875336006-79999999999999871886301000016799999
Q gi|254780349|r 36 IQLIASENI----VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQ-YVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQG 110 (433)
Q Consensus 36 l~LiASEN~----~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~-~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~a 110 (433)
+-+.+|.|| .+|.+.++.... ..+|--|--|.|...|+. +..++| ++..+++|.+-|-+ ..||..||++
T Consensus 47 ~i~f~SNdYLGL~~~p~v~~a~~~a-~~~yG~gs~~Srl~~G~~~~h~~LE----~~LA~~~g~e~all-f~SGy~AN~g 120 (404)
T PRK13393 47 VTVWCSNDYLGMGQHPAVLAAMHEA-LDTCGAGAGGTRNISGTNHYHVLLE----AELADLHGKEAALL-FTSGYVSNWA 120 (404)
T ss_pred EEEEECCCCCCCCCCHHHHHHHHHH-HHHHCCCCCCCHHHHCCHHHHHHHH----HHHHHHHCCCCEEE-ECCHHHHHHH
T ss_conf 9987743445767899999999999-9986899876602018879999999----99999869991999-8744888999
Q ss_pred HHHHHHC--CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH---CCCEEEEECCCCC
Q ss_conf 9998315--4874881233448411147665433333220136658323565989999999860---4667897055243
Q gi|254780349|r 111 VFLALMH--PGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEY---NPKLIIVGGTAYS 185 (433)
Q Consensus 111 v~~ALl~--pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~---kPklIi~G~S~y~ 185 (433)
++.+|.+ |||.|+.=.+. |.|.-.-.-.++ -+...|.- -|++.++++.++. +|++|+.. |.|+
T Consensus 121 ~i~aL~~~~~~d~i~~D~l~---HaSi~dG~rls~--a~~~~f~H------nD~~~Le~~L~~~~~~~~~lIv~e-gVfS 188 (404)
T PRK13393 121 ALSTLASRLPGCVILSDELN---HASMIEGIRHSR--AETRIFRH------NDPADLERKLSDLDPHAPKLVAFE-SVYS 188 (404)
T ss_pred HHHHHHCCCCCCEEEEECCC---CHHHHHHHHHCC--CCEEEEEC------CCHHHHHHHHHHCCCCCCCEEEEE-EECC
T ss_conf 99998578999789998754---598999888547--98799827------999999999985622488089996-5535
Q ss_pred CC---CCHHHHHHHHHHCCCEEEECCCCHHHHHHH---HCC--CCCCCCCCEEEECCCCCCCCCCCEEEEECCCCHHHHC
Q ss_conf 53---637999988641797899186201244320---001--2322002356740456522567448983362056501
Q gi|254780349|r 186 RV---WDWERFRSIADSIGAYLMADISHISGLVVG---GQH--PSPVPHCHIVTTTTHKSLRGPRGGLIMTNHADLAKKI 257 (433)
Q Consensus 186 ~~---~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~---g~~--~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i 257 (433)
.. .|++++.++|+++||+|++|-||-.|.+-- |.. ..-.+..|++++|.-|.| |-.||+|.+++ ++.+-+
T Consensus 189 MdGDiapL~el~~L~~~y~a~L~VDeAH~~Gv~G~~G~G~~e~~gl~~~vdi~~gTfsKA~-Gs~Gg~v~gs~-~~id~L 266 (404)
T PRK13393 189 MDGDIAPIAEICDVADKHGAMTYLDEVHAVGLYGPRGGGIAERDGLADRLTIIEGTLAKAF-GVVGGYITGSA-ALCDFI 266 (404)
T ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCC-CCCCCEEECCH-HHHHHH
T ss_conf 5788568999999997409499984432001036899878887389887628997177643-35775031476-889999
Q ss_pred CHHHCHHH-HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHH
Q ss_conf 66465432-23445566689999999973564899999999888999999861685233458889812631665567679
Q gi|254780349|r 258 NSAIFPGL-QGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGK 336 (433)
Q Consensus 258 ~~avfPg~-qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~ 336 (433)
...--|.. ..++-+..+|+...++.- ++.+ ..-.++..+|+..|.+.|.+.||++. .+++|.+-|-+.+....-.
T Consensus 267 ~~~ar~~IfStalpP~~~aa~~~al~~-l~~~-~~~r~~L~~n~~~~r~~L~~~G~~~~--~s~s~Iipi~ig~~~~a~~ 342 (404)
T PRK13393 267 RSFASGFIFTTSLPPAVAAGALASIRH-LKAS-SAERERHQDRVARLRARLDQAGVPHM--DNPSHIVPVMVGDAVLCKQ 342 (404)
T ss_pred HHHCHHHHHCCCCCHHHHHHHHHHHHH-HHCC-HHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCEEEEEECCHHHHHH
T ss_conf 984728652779889999999999999-8619-69999999999999999996699978--9998879999699999999
Q ss_pred HHHHHHHHCCEEEECCCCCCCCCCCCCC---CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 9999888567188037899899998889---851224666730799989999999999999602
Q gi|254780349|r 337 RAESILGRVSITCNKNSIPFDPESPFIT---SGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 337 ~a~~~Le~~gI~~Nkn~iP~D~~~~~~~---sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
-+...+++.||.++-- ++|.+| +.|||-..+ +..++|++.+.+.+.++.+.
T Consensus 343 ~~~~Ll~~~Gi~v~~i------~~PtVP~g~~rLRi~lsA----~ht~~did~l~~~L~~v~~~ 396 (404)
T PRK13393 343 ISDLLLDRYGIYVQPI------NYPTVPRGTERLRITPSP----LHTDADIEHLVQALSEIWAR 396 (404)
T ss_pred HHHHHHHCCCEEEEEE------CCCCCCCCCEEEEEEECC----CCCHHHHHHHHHHHHHHHHH
T ss_conf 9999986189899988------898589997359987688----79999999999999999998
No 15
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.86 E-value=1.8e-19 Score=156.08 Aligned_cols=317 Identities=17% Similarity=0.220 Sum_probs=211.7
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH----HHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHH
Q ss_conf 301029899998305102886579888753360067999999----9999999871886301000016799999999831
Q gi|254780349|r 41 SENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIEN----IAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALM 116 (433)
Q Consensus 41 SEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~----la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl 116 (433)
.-....|.+++++.. |..||.--.|-.| ..|.||. -..+.+.+.+|.+.|-+ ..||+.+|+++.++++
T Consensus 9 ~~g~l~~~a~~a~~~-----~gdgysvcd~c~~--~ld~~~~P~i~efe~~aAeflG~d~A~~-V~Ggt~Gnqa~i~t~c 80 (361)
T cd06452 9 RGGRLTPEARKALIE-----WGDGYSVCDFCRG--RLDEIEKPPIKDFHHDLAEFLGMDEARV-TPGAREGKFAVMHSLC 80 (361)
T ss_pred HCCCCCHHHHHHHHH-----HCCCCCHHHHCCC--CCCCCCCCCHHHHHHHHHHHCCCCEEEE-ECCCCHHHHHHHHHHH
T ss_conf 169689999999998-----6786471452056--5334769988999999998719966999-4685208999999984
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH------HCCCEEEEECCC--CCCCC
Q ss_conf 5487488123344841114766543333322013665832356598999999986------046678970552--43536
Q gi|254780349|r 117 HPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIE------YNPKLIIVGGTA--YSRVW 188 (433)
Q Consensus 117 ~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~------~kPklIi~G~S~--y~~~~ 188 (433)
+|||.|+.-... |.|--.....+|.....++-..++ ++.||.+.+++.+++ ..|+++++..+. |.-..
T Consensus 81 ~~GD~VIv~~na---H~S~~~a~~laG~~~~~v~~~~~~-~~~i~pe~~~~~Iee~~~e~g~~p~Lilit~~dy~yG~~~ 156 (361)
T cd06452 81 EKGDWVVVDGLA---HYTSYVAAERAGLNVREVPNTGHP-EYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLH 156 (361)
T ss_pred CCCCEEEECCCC---HHHHHHHHHHCCCEEEEECCCCCC-CCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
T ss_conf 799889855751---288998888638469995677685-6651889999999999986189964999966787736631
Q ss_pred CHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCC-CCCCC-CCEEEECCCCCCCCC-CCEEEEECCCCHHHHCCHH--HCH
Q ss_conf 379999886417978991862012443200012-32200-235674045652256-7448983362056501664--654
Q gi|254780349|r 189 DWERFRSIADSIGAYLMADISHISGLVVGGQHP-SPVPH-CHIVTTTTHKSLRGP-RGGLIMTNHADLAKKINSA--IFP 263 (433)
Q Consensus 189 d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~-~Pl~~-ADvvt~sTHKtl~GP-rgGiI~~~~~e~~~~i~~a--vfP 263 (433)
|++++.+||+++|..+++|.||.+| .+| |.... ||+|.+|+|||+..+ +.|++..++ ++.+++.+. +|+
T Consensus 157 dl~~I~~iah~y~iPvlvD~A~~~g-----~lpv~a~~~gaD~v~~s~hK~~~a~~p~gvL~~~~-~~~~~v~R~~~~~~ 230 (361)
T cd06452 157 DAKKIAKVCHEYGVPLLLNGAYTVG-----RMPVSGKELGADFIVGSGHKSMAASAPIGVLATTE-EWADIVFRTSQMFK 230 (361)
T ss_pred CHHHHHHHHHHCCCCEEECCCCCCC-----CCCCCHHHCCCCEEEEECCCCCCCCCCEEEEEECC-HHHHHHHHHCCCCH
T ss_conf 3799999999859968971542247-----57987545079689986565553457437885050-67888874110110
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCE--------EE
Q ss_conf ---------32234455666899999999735648999999998889999998616-8523345888981--------26
Q gi|254780349|r 264 ---------GLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHL--------ML 325 (433)
Q Consensus 264 ---------g~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~--------vl 325 (433)
++.+.|..--+|++-.+ .|... .|. .-++|||.+.++|.+- |+.+.+....+|- +-
T Consensus 231 ~K~~~~Lg~t~~~~~~~~lmAS~~~~-~~~v~-~~~----eev~~ar~~~~el~kI~G~~~~ge~p~~~dl~~~dt~~~~ 304 (361)
T cd06452 231 IKEVELLGCTLRGAPLVTLMASFPHV-KERVK-RWD----EEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFD 304 (361)
T ss_pred HHHHHHHCCCCCCCHHHHHHCCCHHH-HHHHH-HHH----HHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEECCCCCE
T ss_conf 45778746786551799998072999-99998-777----8999999999998428453121557776774561478632
Q ss_pred ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 3166556767999998885671880378998999988898512246667307999899999999999996
Q gi|254780349|r 326 VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 326 vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
+-.+..+.+|...++.|.+-||...+ |+.+ . +-.+++.|..+++++.+.+-+.++.
T Consensus 305 ~~~~~~~~~G~~L~~~L~~rgI~~~~---~g~t------~-----~~~~~tyG~t~e~i~~l~~a~keI~ 360 (361)
T cd06452 305 EIAKKHKRRGYFLYSELKKRGIHGIK---PGLT------R-----YFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred EEEECCCCCCCHHHHHHHHCCCEEEC---CCCC------C-----EEEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 44104786500699999876976871---6853------3-----7999995168889999999999975
No 16
>PRK02948 cysteine desulfurase; Provisional
Probab=99.86 E-value=8.5e-19 Score=151.35 Aligned_cols=331 Identities=16% Similarity=0.167 Sum_probs=219.1
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH-HHHHHHH----H
Q ss_conf 4301029899998305102886579888753360067999999999999987188630100001679-9999999----8
Q gi|254780349|r 40 ASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQ-MNQGVFL----A 114 (433)
Q Consensus 40 ASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~-An~av~~----A 114 (433)
|+...++|.|.+++-.-+.+.|+- |...|..|-+--..+| -|.+...+++|++--+|=..||+. +|..++. +
T Consensus 7 aAttp~~~~v~~a~~~~~~~~~~N--~~s~h~~~~~a~~~~e-~aR~~ia~~lga~~~~IvFTsg~Tes~nlai~~~~~~ 83 (381)
T PRK02948 7 AATTPMSEEALQTYQKAASQYFGN--ESSLHDIGGTASSLLQ-VCRKTFAEMIGGKEQGVYFTSGGTESNYLAIQSLLNA 83 (381)
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHH-HHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf 245999999999999999870689--8514179999999999-9999999980999780899288769999999999997
Q ss_pred HHCCCCEEEECCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC-CC-CCCCCCHH
Q ss_conf 315487488123344841114766-5433333220136658323565989999999860466789705-52-43536379
Q gi|254780349|r 115 LMHPGDSFMGLSLDSGGHLTHGSS-VNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGG-TA-YSRVWDWE 191 (433)
Q Consensus 115 Ll~pGD~Il~~~l~~GGHlshg~~-~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~-S~-y~~~~d~~ 191 (433)
+.++||.|+.-+++| -|--.. ..+..+++++...++| ++|.||++.+++.+. .+++||.+.. |. ..-..|++
T Consensus 84 ~~~~g~~ii~s~~EH---~sv~~~~~~l~~~G~~v~~i~~d-~~G~id~~~l~~~l~-~~t~LV~v~~asN~tG~i~pi~ 158 (381)
T PRK02948 84 LPQNKKHIITTPMEH---ASIHSYFQSLESQGYTVTEIPVD-KSGLIRLVDLERAIT-EDTVLASIQHANSEIGTIQPIA 158 (381)
T ss_pred HCCCCCEEEECCCCC---CHHHHHHHHHHHCCCEEEEECCC-CCCCCCHHHHHHHCC-CCCEEEEEECEEECCCCCCCHH
T ss_conf 057999899746422---00789999999729989996778-888769999997568-9946999975020686477588
Q ss_pred HHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCCCCCCC-EEEEECCCCHHHHCCHHHCHHH---
Q ss_conf 99988641797899186201244320001232200--23567404565225674-4898336205650166465432---
Q gi|254780349|r 192 RFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSLRGPRG-GLIMTNHADLAKKINSAIFPGL--- 265 (433)
Q Consensus 192 ~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~i~~avfPg~--- 265 (433)
++.++|+++|+++++|++|..|-+ |=.+.. +|++++|-|| |.||.| |+++.++..-+ +.++||.
T Consensus 159 ~I~~~a~~~g~~~~vDa~Q~~g~~-----~idv~~l~~D~~~fS~HK-~~GP~GiG~L~~~~~~~~----~~~~~g~~~e 228 (381)
T PRK02948 159 EIGALLKKYNVLFHSDCVQTFGKL-----PIDVFEMGIDSLSVSAHK-IYGPKGVGAVYINPQVRW----KPVFPGTSHE 228 (381)
T ss_pred HHHHHHHHHCCEEEEEHHHHCCCC-----CCCCCCCCCCEEEEEHHC-CCCCCCEEEEEECCCCCC----CCCCCCCCCC
T ss_conf 999999870987984656614651-----665344677625620000-458872599998789865----5566898878
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC----CCEEEECCCCCCCCHHH
Q ss_conf ----2344556668999999997356489999999988899999986168523345888----98126316655676799
Q gi|254780349|r 266 ----QGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTD----NHLMLVDLRSKRMTGKR 337 (433)
Q Consensus 266 ----qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd----~H~vlvdl~~~~~~G~~ 337 (433)
-|.+...-|++++.|+.... ..+.....+.-.-.+.|-+.|...+..+.-.+.. .|.+-+-+ .++.|..
T Consensus 229 ~~~~~GT~nv~gi~~l~~A~~~~~-~~~~~~~~~~~~L~~~l~~~l~~~~~~~~~~~~~~~~~p~i~~~~~--~~~~~~~ 305 (381)
T PRK02948 229 KGFRPGTVNVPGIAAFLTAAENIL-KNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTI--KGFEGQY 305 (381)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEC--CCCCHHH
T ss_conf 976678675999999999999998-6499999999999999999985479974656886345686788733--8868899
Q ss_pred HHHHHHHCCEEEECC--CCCCCCCCC-----------CCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 999888567188037--899899998-----------8898512246667307999899999999999996
Q gi|254780349|r 338 AESILGRVSITCNKN--SIPFDPESP-----------FITSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 338 a~~~Le~~gI~~Nkn--~iP~D~~~~-----------~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
....|++.||.+.-- +-++..++. ...+.||++...-|| ++|++.+.+-|.++.
T Consensus 306 ~~~~l~~~gI~v~~GsaCa~~~~~~s~~l~a~g~~~~~a~~~vRvS~g~ynT----~eeId~~i~al~~i~ 372 (381)
T PRK02948 306 TMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTT----KDQIDTTIHALETIG 372 (381)
T ss_pred HHHHCCCCCCEEECCHHHCCCCCCCCHHHHHCCCCHHHCCCEEEEECCCCCC----HHHHHHHHHHHHHHH
T ss_conf 9985421681897804527898870089997599878809259997479999----999999999999999
No 17
>PRK07179 hypothetical protein; Provisional
Probab=99.86 E-value=1.3e-18 Score=150.09 Aligned_cols=330 Identities=20% Similarity=0.275 Sum_probs=230.3
Q ss_pred HHCCCCCCCCCCC----CHHHHHHHHCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHH
Q ss_conf 8388810430102----9899998305102886579888753360-0679999999999999871886301000016799
Q gi|254780349|r 33 NDEIQLIASENIV----SRAVLEAQGSILTNKYAEGYPSKRYYGG-CQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQM 107 (433)
Q Consensus 33 ~~~l~LiASEN~~----S~~v~~~l~S~l~nkyaeG~pg~ryy~G-~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~A 107 (433)
++.|+ .+|.||+ .|.|.++....+ .+|--|.-+.|-..| .+...++| ++..+++|.+.|-+ .-||..|
T Consensus 54 ~~~i~-fsSNdYLGLs~hp~v~~a~~~ai-~~~G~g~~~Srl~~G~~~~h~~LE----~~LA~~~g~e~all-f~SGy~A 126 (408)
T PRK07179 54 PDAII-LQSNDYLNLSGHPDIIKAQIAAL-QEYGDGLVMSAVFLHDDSPKPQFE----KKLAAFTGFESGLL-CQSGWAA 126 (408)
T ss_pred CCEEE-EECCCCCCCCCCHHHHHHHHHHH-HHHCCCCCCCCCCCCCCHHHHHHH----HHHHHHHCCCCEEE-ECCHHHH
T ss_conf 73568-57666347889999999999999-984999874680316758999999----99999868992999-8753899
Q ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 9999998315487488123344841114--76654333332201366583235659899999998604667897055243
Q gi|254780349|r 108 NQGVFLALMHPGDSFMGLSLDSGGHLTH--GSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS 185 (433)
Q Consensus 108 n~av~~ALl~pGD~Il~~~l~~GGHlsh--g~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~ 185 (433)
|++++.+|.+++|.|+. +.--|.|- |.. .++ -+...|.- -|++.++++++++.|++|++. |+|+
T Consensus 127 N~g~i~aL~~~~d~I~~---D~~~HaSi~dG~r--ls~--a~~~~f~H------ND~~~Le~~L~~~~~~iIv~e-gVfS 192 (408)
T PRK07179 127 NVGLLQTIADPNTPVYI---DFFAHMSLWEGVR--AAG--AQAHPFRH------NDVDHLRRQIERHGPGIIVVD-SVYS 192 (408)
T ss_pred HHHHHHHHCCCCCEEEE---ECCCCHHHHHHHH--HCC--CCEEEECC------CCHHHHHHHHHHCCCCEEEEE-ECCC
T ss_conf 99999996799988999---8877888987676--148--85799479------999999999984699779997-4235
Q ss_pred CC---CCHHHHHHHHHHCCCEEEECCCCHHHHHHH---HCCC--CCCCCCCEEEECCCCCCCCCCCEEEEECCCCHHHHC
Q ss_conf 53---637999988641797899186201244320---0012--322002356740456522567448983362056501
Q gi|254780349|r 186 RV---WDWERFRSIADSIGAYLMADISHISGLVVG---GQHP--SPVPHCHIVTTTTHKSLRGPRGGLIMTNHADLAKKI 257 (433)
Q Consensus 186 ~~---~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~---g~~~--~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i 257 (433)
.. .|++++.++|+++||+|++|-||-.|.+-. |... .-.+..|++++|--|+| |-.||+|++++ ++.+-+
T Consensus 193 MdGDiapL~~l~~la~~y~a~L~VDEAH~~Gv~G~~G~G~~~~~gl~~~vdi~~gTlsKA~-G~~GGfi~gs~-~~id~L 270 (408)
T PRK07179 193 TTGTIAPLVDIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAF-AGRAGIITCPA-ELAEYF 270 (408)
T ss_pred CCCCCCCHHHHHHHHHHHCEEEEEECCCEEEEECCCCCCHHHHCCCCCCCEEEEEEHHHHH-HHCCCCEECCH-HHHHHH
T ss_conf 7887668999999998726798861435052367999877998499878728993717867-63766342379-999999
Q ss_pred CHHHCHHH-HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHH
Q ss_conf 66465432-23445566689999999973564899999999888999999861685233458889812631665567679
Q gi|254780349|r 258 NSAIFPGL-QGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGK 336 (433)
Q Consensus 258 ~~avfPg~-qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~ 336 (433)
...--|.. .++..+..+|+...++.-..+ ..+..++.-+|++.|.+.|.+.||++ ++++++.+-|-+.+.. ...
T Consensus 271 ~~~ar~~IfStal~P~~~aa~~aal~ii~~--~~~~r~~L~~n~~~~r~~L~~~G~~i--~~s~spIvpi~~G~~~-~a~ 345 (408)
T PRK07179 271 PFVSYPAIFSSTLLPHEIAGLEATLEVIES--ADERRARLHANARFLREGLSELGYNI--RSSESQIIALETGSER-NTE 345 (408)
T ss_pred HHHCCCCCCCCCCCHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHCCCCC--CCCCCCEEEEECCCHH-HHH
T ss_conf 971877455666789999999999999862--99999999999999999998379997--8999997999859999-999
Q ss_pred HHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 9999888567188037899899998889851224666730799989999999999999602
Q gi|254780349|r 337 RAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 337 ~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
.+.+.|.+.||.++--.-|-= |...+.||+...+ ...++|++.+.+.+.++-+.
T Consensus 346 ~~~~~L~~~Gi~v~~i~~PtV---P~g~~rlRislsA----~ht~~dId~ll~~l~~~~~e 399 (408)
T PRK07179 346 VLRDALEERNVFGAVFCAPAT---PKNRALIRLSLNA----DLTKSDLDRVLEVCREARDE 399 (408)
T ss_pred HHHHHHHHCCCEEEEECCCCC---CCCCEEEEEEECC----CCCHHHHHHHHHHHHHHHHH
T ss_conf 999999978962841679989---9998169987487----79999999999999999998
No 18
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.86 E-value=3.1e-19 Score=154.44 Aligned_cols=307 Identities=18% Similarity=0.182 Sum_probs=202.9
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHH-HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 067999999999999987188630100001679999999983-1548748812334484111476654333332201366
Q gi|254780349|r 74 CQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLAL-MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 74 ~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~AL-l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
..++++.|. ..++.+|++|| |=..||+.|...++.|| ++|||.|+..+... .+ ..-.+.-.+...+.-+
T Consensus 28 G~~v~~fE~----~~~~~~g~k~~-v~~~sgT~AL~lal~al~~~~gdeVivp~~tf---~a--t~~ai~~~Ga~pvf~D 97 (380)
T TIGR03588 28 GPTVPAFEE----ALAEYVGAKYA-VAFNSATSALHIACLALGVGPGDEVWTTPITF---VA--TANCALYCGAKVDFVD 97 (380)
T ss_pred CHHHHHHHH----HHHHHHCCCEE-EEECCHHHHHHHHHHHCCCCCCCEEEECCCCC---HH--HHHHHHHCCCEEEEEE
T ss_conf 976999999----99999785949-99758899999999984999989999678530---88--6799998799689984
Q ss_pred CCCCCCCCCHHHHHHHHHHH---CCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCE
Q ss_conf 58323565989999999860---466789705524353637999988641797899186201244320001232200235
Q gi|254780349|r 153 VRKEDGLLDMHEIESLAIEY---NPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHI 229 (433)
Q Consensus 153 ~d~~~~~ID~d~~~~~a~~~---kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADv 229 (433)
+|++++.||.+.+++.+... |+|.|+. ...|..+.|++++.+||++.|..|+.|+||..|---.|..---..+.|+
T Consensus 98 vd~~t~~id~~~l~~~it~~~~~ktkaIi~-vh~~G~~~d~~~i~~ia~~~~i~lIEDaA~a~Ga~~~gk~~Gs~~~gd~ 176 (380)
T TIGR03588 98 IDPDTGNIDEDALEKKLAAAKGKLPKAIVP-VDFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADA 176 (380)
T ss_pred CCHHHCCCCHHHHHHHHHHCCCCCCEEEEE-ECCCCEECCHHHHHHHHHHCCCEEEEECCCHHCCCCCCCCCCCCCCCCE
T ss_conf 410001489888777776436777259999-4898543489999999998698899988001157757876566443524
Q ss_pred EEECCC--CCCCCCCCEEEEECCCCHHHHCCHHHCHHHH----------------------HHHHHHHHHHHHHHHHHHH
Q ss_conf 674045--6522567448983362056501664654322----------------------3445566689999999973
Q gi|254780349|r 230 VTTTTH--KSLRGPRGGLIMTNHADLAKKINSAIFPGLQ----------------------GGPFMHSIAAKAVAFGEAL 285 (433)
Q Consensus 230 vt~sTH--Ktl~GPrgGiI~~~~~e~~~~i~~avfPg~q----------------------g~~~~~~iaa~aval~Ea~ 285 (433)
-++|.| |.+....||||+||++++++++..----|+. -|..|..+. .|+.-++
T Consensus 177 ~~fSF~~~K~ittGeGG~i~tnd~~l~~~~r~lr~~G~~~~~~~~~~~~~~~~~y~~~~~G~N~rmseiq---AAig~~q 253 (380)
T TIGR03588 177 TVFSFHPVKIITTAEGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQ---AALGLSQ 253 (380)
T ss_pred EEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCEEEEECCCCCCCCCHHH---HHHHHHH
T ss_conf 6773355555777885399969999999999999769677731001467887403663476665431241---4876888
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCC-CCC--CCCCC--CCEEEECCCC-CCCCHHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 564899999999888999999861685-233--45888--9812631665-56767999998885671880378998999
Q gi|254780349|r 286 SSEFRDYAKQIVLNSQALAKKLQFLGF-DIV--SGGTD--NHLMLVDLRS-KRMTGKRAESILGRVSITCNKNSIPFDPE 359 (433)
Q Consensus 286 ~~~f~~Ya~qvv~NA~~La~~L~~~G~-~vv--~ggTd--~H~vlvdl~~-~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~ 359 (433)
-..+.+..++-.+|++...+.|..... .+. ..+++ .|+..+-+.. ...+-.+..+.|.+.||-+...-.|-...
T Consensus 254 L~~ld~~~~~R~~ia~~Y~~~L~~~~~~~~~~~~~~~~~~~~~y~i~~~~~~~~~r~~l~~~L~~~gI~t~~~y~Plh~~ 333 (380)
T TIGR03588 254 LKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQ 333 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCHHCC
T ss_conf 88899999999999999999647899835674699983156899999826673149999999997799856723044229
Q ss_pred CCCCCCCCCCC----CHHH--------HHCCCCHHHHHHHHHHHHHHH
Q ss_conf 98889851224----6667--------307999899999999999996
Q gi|254780349|r 360 SPFITSGIRLG----TPSG--------TTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 360 ~~~~~sGiRlG----T~ai--------TtrG~~e~em~~iA~li~~~L 395 (433)
|.+ .++..-+ +..+ ..-+|.++|++.|++.|.++|
T Consensus 334 p~~-~~~~~~~~~p~ae~~~~~~l~LP~~~~Lt~~di~~I~~~Ik~vL 380 (380)
T TIGR03588 334 PYY-RQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred HHH-HHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 988-82788799879999984979897999989999999999999869
No 19
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.85 E-value=5e-18 Score=145.99 Aligned_cols=337 Identities=17% Similarity=0.207 Sum_probs=216.5
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC-CCEECCCHHHHH-HHHHHHHHH-
Q ss_conf 04301029899998305102886579888753360067999999999999987188-630100001679-999999983-
Q gi|254780349|r 39 IASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNV-NFVNVQSHSGSQ-MNQGVFLAL- 115 (433)
Q Consensus 39 iASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a-~~anvqp~SG~~-An~av~~AL- 115 (433)
.|+...+++.|.++...-+.+.++. |+.--|.........-+-|.++..+++|| +.-++=..||+. ++-.+..++
T Consensus 25 ~Aatt~~p~~V~~a~~~~~~~~~~n--~~~~~~~~~~~~~~~~e~aR~~iA~llga~~~~eI~fts~~Te~~n~~~~~~~ 102 (401)
T PRK10874 25 SAATALKPQAVIEATQQFYSLSAGN--VHRSQFAEAQRLTARYEAAREKVAQLLNAPDAKNIVWTRGTTESINMVAQCYA 102 (401)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHH
T ss_conf 8752689999999999999864489--88641089999999999999999998296998979997965899999999999
Q ss_pred ---HCCCCEEEECCCCCCCCCCCCCCC-CC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECC--CCCCCC
Q ss_conf ---154874881233448411147665-43-33332201366583235659899999998604667897055--243536
Q gi|254780349|r 116 ---MHPGDSFMGLSLDSGGHLTHGSSV-NM-SGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGT--AYSRVW 188 (433)
Q Consensus 116 ---l~pGD~Il~~~l~~GGHlshg~~~-~~-~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S--~y~~~~ 188 (433)
++|||.|+..+.+|-..+. +- .. .-..+++...+++. ++.+|.+.+++++. .+.++|.+..- ......
T Consensus 103 ~~~~~~gd~vv~s~~Eh~s~~~---pw~~~~~~~g~~v~~~p~~~-~g~~d~~~l~~~i~-~~T~lVai~~vsn~~G~~~ 177 (401)
T PRK10874 103 RPRLQPGDEIIVSEAEHHANLV---PWLMVAQQTGAKVVKLPLGA-DRLPDVDLLPELIT-PRSRILALGQMSNVTGGCP 177 (401)
T ss_pred HHHCCCCCEEEEECCCCCCCHH---HHHHHHHHCCCEEEEECCCC-CCCCCHHHHHHHHC-CCCEEEEEECCCCCCCCCC
T ss_conf 9735899838870441354158---99999985396369941588-88759999999855-8965999979667886557
Q ss_pred CHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCCCCCCC-EEEEECCCCHHHHCCHH-----
Q ss_conf 37999988641797899186201244320001232200--23567404565225674-48983362056501664-----
Q gi|254780349|r 189 DWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSLRGPRG-GLIMTNHADLAKKINSA----- 260 (433)
Q Consensus 189 d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~i~~a----- 260 (433)
|++++.++|++.|+++++|++|.+|-+ |=.+.. +|++++|.|| |.||+| |++..++ ++.+++.--
T Consensus 178 pv~~I~~~~~~~g~~~~vDa~Q~~g~~-----~idv~~l~vD~l~~S~HK-l~GP~G~G~Lyv~~-~~~~~l~P~~~Gg~ 250 (401)
T PRK10874 178 DLARAITLAHQAGMVVMVDGAQGAVHF-----PADVQQLDIDFYAFSGHK-LYGPTGIGVLYGKS-ELLEAMSPWLGGGK 250 (401)
T ss_pred CHHHHHHHHHHCCCEEEEECCCCCCCC-----CCCHHHHCCCEEEEECHH-CCCCCCEEEEEECC-CHHHHCCCEECCCC
T ss_conf 699999999764977997530137742-----546678439889987033-16998149999853-03642786535875
Q ss_pred ---------HCHH------HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCEE
Q ss_conf ---------6543------2234455666899999999735648999999998889999998616-85233458889812
Q gi|254780349|r 261 ---------IFPG------LQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHLM 324 (433)
Q Consensus 261 ---------vfPg------~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~v 324 (433)
..|. -.|.+....+++++.++............+....=++.+.+.|.+. |+.... -.++.++
T Consensus 251 ~~~~~~~~~~~~~~~~~r~e~GT~n~~~i~~l~aal~~l~~~~~~~~~~~~~~L~~~~~~~L~~~~g~~~~~-~~~~~i~ 329 (401)
T PRK10874 251 MLTEVSFDGFTPQSAPWRLEAGTPNVAGVIGLSAALEWLADIDIEQAESWSRSLATLAEDALAKRPGFRSFR-CQDSSLL 329 (401)
T ss_pred CCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCEE
T ss_conf 400234676542555000257783288999999999999963999999999999999999985289965347-9999889
Q ss_pred EECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCC--CCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 6316655676799999888567188037899899--99888985122466673079998999999999999960
Q gi|254780349|r 325 LVDLRSKRMTGKRAESILGRVSITCNKNSIPFDP--ESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 325 lvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~--~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
-..+ .++.+.+....|++.||.|--..---.+ ..-..++.||++...-|| ++|++.+.+.|.++|+
T Consensus 330 sf~~--~gi~~~~l~~~L~~~gi~v~~g~~ca~~~l~alg~~g~iRvS~~~ynT----~~dId~li~al~~~v~ 397 (401)
T PRK10874 330 AFDF--AGVHHSDMVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNT----QSDVDALVNAVDRALE 397 (401)
T ss_pred EEEE--CCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHCCCCEEEEECCCCCC----HHHHHHHHHHHHHHHH
T ss_conf 9987--995999999999778978961853428999985999979996588889----9999999999999999
No 20
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.85 E-value=3.2e-18 Score=147.31 Aligned_cols=323 Identities=19% Similarity=0.241 Sum_probs=223.3
Q ss_pred CCCCCCCC----CHHHHHHHHCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHH
Q ss_conf 10430102----989999830510288657988875336006-7999999999999987188630100001679999999
Q gi|254780349|r 38 LIASENIV----SRAVLEAQGSILTNKYAEGYPSKRYYGGCQ-YVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVF 112 (433)
Q Consensus 38 LiASEN~~----S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~-~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~ 112 (433)
..+|.||+ .|.+.++... -..+|--|--+.|...|+. ...++| +...++||.+-|-+ ..||..||++++
T Consensus 46 nf~SndYLGL~~~p~v~~a~~~-a~~~yG~gs~~Srl~~G~~~~h~~LE----~~lA~~~g~e~all-f~SGy~aN~~~i 119 (395)
T PRK06939 46 NFCANNYLGLANHPELIAAAKA-ALDSHGFGMASVRFICGTQDLHKELE----QKLAKFLGTEDAIL-YSSCFDANGGLF 119 (395)
T ss_pred EEECCCCCCCCCCHHHHHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHH----HHHHHHHCCCCEEE-ECCHHHHHHHHH
T ss_conf 9776765578899899999999-99972999877685747839999999----99999869994999-755277678899
Q ss_pred HHHHCCCCEEEECCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC-----CCEEEEECCCCC
Q ss_conf 98315487488123344841114--76654333332201366583235659899999998604-----667897055243
Q gi|254780349|r 113 LALMHPGDSFMGLSLDSGGHLTH--GSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYN-----PKLIIVGGTAYS 185 (433)
Q Consensus 113 ~ALl~pGD~Il~~~l~~GGHlsh--g~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~k-----PklIi~G~S~y~ 185 (433)
.+|++|+|.|+.=.+. |-|- |.. .++ -+.+.|+- -|++.++++.++.+ .++|+.. ++|+
T Consensus 120 ~aL~~~~d~i~~D~l~---HaSiidG~~--ls~--a~~~~f~H------nD~~~Le~~L~~~~~~~~~~~~ivte-gVfS 185 (395)
T PRK06939 120 ETLLGKEDAIISDALN---HASIIDGVR--LCK--AKRYRYAN------NDMADLEAQLKEAKEAGARHKLIATD-GVFS 185 (395)
T ss_pred HHHCCCCCEEEEECCC---CHHHHHHHH--HCC--CCEEEECC------CCHHHHHHHHHHHHHCCCCEEEEEEE-CCCC
T ss_conf 9964799889984563---588999998--658--94799668------99999999999600215862899996-6777
Q ss_pred CC---CCHHHHHHHHHHCCCEEEECCCCHHHHHH---HHCC--CCCCCCCCEEEECCCCCCCCCCCEEEEECCCCHHHHC
Q ss_conf 53---63799998864179789918620124432---0001--2322002356740456522567448983362056501
Q gi|254780349|r 186 RV---WDWERFRSIADSIGAYLMADISHISGLVV---GGQH--PSPVPHCHIVTTTTHKSLRGPRGGLIMTNHADLAKKI 257 (433)
Q Consensus 186 ~~---~d~~~l~eIa~~~ga~l~~D~aH~~GLIa---~g~~--~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i 257 (433)
.. .|++++.++|+++|++|++|-||-.|..- .|.. ..-.+..||+++|.-|.|.|-.||+|.+++ ++.+-+
T Consensus 186 MdGDiapL~~l~~L~~~y~a~L~vDeAH~~GvlG~~G~G~~e~~gl~~~vdi~~gTlsKA~~G~~Ggfv~g~~-~~i~~l 264 (395)
T PRK06939 186 MDGDIANLPEICDLADKYDALVMVDDSHAVGFLGENGRGTVEHCGVMDRVDIITGTLGKALGGASGGYTAGKK-EVIDWL 264 (395)
T ss_pred CCCCCCCHHHHHHHHHHHCEEEEEECCCCEEEECCCCCCHHHHCCCCCCCEEEECCCHHHHHCCCCCEEECCH-HHHHHH
T ss_conf 7876015999999999727379861430000345899867998099988689977327666247651451667-889999
Q ss_pred CHHHCHHHHHHHH-HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHH
Q ss_conf 6646543223445-566689999999973564899999999888999999861685233458889812631665567679
Q gi|254780349|r 258 NSAIFPGLQGGPF-MHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGK 336 (433)
Q Consensus 258 ~~avfPg~qg~~~-~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~ 336 (433)
....-|..-+... +..+++...++ +.++ +..+..++.-+|++.|.+.|.+.||++.. ++++.+-|-+.+.. ...
T Consensus 265 ~~~~r~~ifStalpp~~~aa~~~al-~~~~-~~~~~r~~L~~n~~~~r~~l~~~g~~~~~--s~spI~pi~iG~~~-~a~ 339 (395)
T PRK06939 265 RQRSRPYLFSNSLAPAIVAASIKVL-ELLE-ESDELRDRLWENARYFREGMTAAGFTLGP--GEHPIIPVMLGDAK-LAQ 339 (395)
T ss_pred HHHCHHHHCCCCCCHHHHHHHHHHH-HHHH-HCHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCCCEEEEEECCHH-HHH
T ss_conf 9847122115799879999999999-9987-49599999999999999999967998689--99997999969999-999
Q ss_pred HHHHHHHHCCEEEECCCCCCCCCCCCCC---CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9999888567188037899899998889---85122466673079998999999999999960
Q gi|254780349|r 337 RAESILGRVSITCNKNSIPFDPESPFIT---SGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 337 ~a~~~Le~~gI~~Nkn~iP~D~~~~~~~---sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
.+.+.|.+.||.|+-- ++|.+| +.||+...+ ...++|++.+.+.+.++-+
T Consensus 340 ~~~~~L~~~Gi~v~~i------r~PtVp~g~~rlRi~lta----~ht~~did~lv~~l~~v~~ 392 (395)
T PRK06939 340 EFADRLLEEGVYVIGF------SFPVVPKGQARIRTQMSA----AHTKEQLDRAIDAFEKVGK 392 (395)
T ss_pred HHHHHHHHCCCEEEEE------CCCCCCCCCCEEEEEECC----CCCHHHHHHHHHHHHHHHH
T ss_conf 9999999779748207------899889898569988787----7999999999999999999
No 21
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.84 E-value=3.3e-18 Score=147.27 Aligned_cols=328 Identities=20% Similarity=0.223 Sum_probs=221.4
Q ss_pred CCCCCCCCCCC----CHHHHHHHHCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHH
Q ss_conf 88810430102----989999830510288657988875336006-7999999999999987188630100001679999
Q gi|254780349|r 35 EIQLIASENIV----SRAVLEAQGSILTNKYAEGYPSKRYYGGCQ-YVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQ 109 (433)
Q Consensus 35 ~l~LiASEN~~----S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~-~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~ 109 (433)
.+.+.+|.||. +|.++++.... ..+|--|--|.|--.|+. +..++| ++..++||.+-|-+ ..||..||+
T Consensus 46 ~~~~FsSNdYLGLs~~p~v~~a~~~a-~~~~G~gs~gSrl~~G~~~~h~~LE----~~LA~~~g~e~all-f~SGy~AN~ 119 (406)
T PRK09064 46 EVTVWCSNDYLGMGQHPKVIEAMHEA-LDRCGAGAGGTRNISGTNHYHVELE----RELADLHGKEAALV-FTSGYVSND 119 (406)
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHH-HHHHCCCCCCCCCCCCCHHHHHHHH----HHHHHHHCCCCEEE-ECCHHHHHH
T ss_conf 99984654435777999999999999-9984899877770405879999999----99999858885899-774178889
Q ss_pred HHHHHHHC--CCCEEEECCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---HCCCEEEEEC
Q ss_conf 99998315--4874881233448411147665---43333322013665832356598999999986---0466789705
Q gi|254780349|r 110 GVFLALMH--PGDSFMGLSLDSGGHLTHGSSV---NMSGKWFKAIPYNVRKEDGLLDMHEIESLAIE---YNPKLIIVGG 181 (433)
Q Consensus 110 av~~ALl~--pGD~Il~~~l~~GGHlshg~~~---~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~---~kPklIi~G~ 181 (433)
+++.+|.+ |+|.|+.=. +.|.+-. -.++. ....|.- -|++.++++.++ .+|++|++.
T Consensus 120 g~i~aL~~~~p~~~i~~D~------l~HASiidG~rls~a--~~~~f~H------ND~~~Le~~L~~~~~~~~~iIvtE- 184 (406)
T PRK09064 120 ATLSTLAKLIPGCVIFSDE------LNHASMIEGIRRSGA--EKHIFRH------NDVAHLEELLAAADPDRPKLIAFE- 184 (406)
T ss_pred HHHHHHHCCCCCCEEEEEC------CCCHHHHHHHHHCCC--CEEEECC------CCHHHHHHHHHHCCCCCCEEEEEE-
T ss_conf 9999985679996899814------233248999875599--5899479------998999999983777897099997-
Q ss_pred CCCCCC---CCHHHHHHHHHHCCCEEEECCCCHHHHHH---HHCC--CCCCCCCCEEEECCCCCCCCCCCEEEEECCCCH
Q ss_conf 524353---63799998864179789918620124432---0001--232200235674045652256744898336205
Q gi|254780349|r 182 TAYSRV---WDWERFRSIADSIGAYLMADISHISGLVV---GGQH--PSPVPHCHIVTTTTHKSLRGPRGGLIMTNHADL 253 (433)
Q Consensus 182 S~y~~~---~d~~~l~eIa~~~ga~l~~D~aH~~GLIa---~g~~--~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~e~ 253 (433)
+.|+.. .|++++.++|++++|+|++|-||-.|.+- .|.. ..-.+..|++++|.-|.| |-.||+|.+.+ ++
T Consensus 185 gVfSMdGDiapL~~l~~l~~~y~a~L~VDeAH~~Gv~G~~G~G~~e~~g~~~~vdi~~gTfsKA~-Gs~Ggfv~gs~-~~ 262 (406)
T PRK09064 185 SVYSMDGDIAPIAEICDLADKYNAMTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAF-GVMGGYIAGSA-SL 262 (406)
T ss_pred ECCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCC-CCCCEEECCCH-HH
T ss_conf 00016787657999999998609599996221022036888773987298666707992166523-57750431788-99
Q ss_pred HHHCCHHHCHHHHHH-HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCC
Q ss_conf 650166465432234-4556668999999997356489999999988899999986168523345888981263166556
Q gi|254780349|r 254 AKKINSAIFPGLQGG-PFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKR 332 (433)
Q Consensus 254 ~~~i~~avfPg~qg~-~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~ 332 (433)
.+-+-+.--|..-+. .-+..+++...++.. +.. ..+..++.-+|++.|.+.|.+.||++. .+++|.+-|-+.+..
T Consensus 263 id~L~~~ar~~IfStalpp~~~aa~~~al~~-l~~-~~~~r~~L~~n~~~~r~~l~~~G~~~~--~s~spIipi~ig~~~ 338 (406)
T PRK09064 263 IDAVRSYAPGFIFTTSLPPAIAAAALASIRH-LKE-SNEERERHQERAAKLKASLDAAGIPVM--PNPSHIVPVIVGDPE 338 (406)
T ss_pred HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH-HHC-CHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCEEEEEECCHH
T ss_conf 9999871853002678999999999999999-870-907789999999999986774499747--999987999959999
Q ss_pred CCHHHHH-HHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 7679999-9888567188037899899998889851224666730799989999999999999602
Q gi|254780349|r 333 MTGKRAE-SILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 333 ~~G~~a~-~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
....+. ..|++.||.++--.-|-= |...+.|||...+ +..++|++.+.+.+.++.+.
T Consensus 339 -~~~~~~~~Ll~~~Gi~v~~I~~PtV---P~g~~rLRi~l~a----~ht~edid~l~~~L~ev~~~ 396 (406)
T PRK09064 339 -KCKKASDRLLEEHGIYVQPINYPTV---PRGTERLRITPTP----LHTDEMIDHLVEALVEVWAR 396 (406)
T ss_pred -HHHHHHHHHHHHCCEEEEEECCCCC---CCCCCEEEEEECC----CCCHHHHHHHHHHHHHHHHH
T ss_conf -9999999999868987810889988---9998469988686----69999999999999999998
No 22
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.84 E-value=4e-18 Score=146.64 Aligned_cols=333 Identities=18% Similarity=0.234 Sum_probs=210.3
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHH-HHHHHHHHHHH---
Q ss_conf 43010298999983051028865798887533600679999999999999871886301000016-79999999983---
Q gi|254780349|r 40 ASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSG-SQMNQGVFLAL--- 115 (433)
Q Consensus 40 ASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG-~~An~av~~AL--- 115 (433)
|+-..++|.|.+++..-+.+.|+. |+..|..|-+ ..++-+-+.+...+++||+.-+|=..|| +.++-.++.++
T Consensus 6 AAtt~~~~~V~~a~~~~~~~~~~n--p~~~h~~~~~-a~~~~e~aR~~iA~~lga~~~eIvFt~~~T~a~n~~i~~~~~~ 82 (379)
T TIGR03402 6 NATTRVDPEVLEAMLPYFTEYFGN--PSSMHSFGGE-VGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAA 82 (379)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCC--CCCCCHHHHH-HHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf 665889999999999999965899--7765899999-9999999999999982999673999288799999999999986
Q ss_pred HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC--CCCCCCCCHHHH
Q ss_conf 154874881233448411147665433333220136658323565989999999860466789705--524353637999
Q gi|254780349|r 116 MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGG--TAYSRVWDWERF 193 (433)
Q Consensus 116 l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~--S~y~~~~d~~~l 193 (433)
.++||.|+...++|..-+. ....+..+.+++...++|+ ++.||++++++++ ..+.++|.+.. +......|++++
T Consensus 83 ~~~~d~Ii~s~~eH~a~~~--~~~~l~~~g~~v~~~~~~~-~g~id~~~l~~~l-~~~T~lvs~~~~sn~tG~i~pv~~I 158 (379)
T TIGR03402 83 QPEKRHIITTAVEHPAVLS--LCQHLEKQGYKVTYLPVDE-EGRLDLEELRAAI-TDDTALVSVMWANNETGTIFPIEEI 158 (379)
T ss_pred CCCCCEEEEECCHHHHHHH--HHHHHHHCCCEEEEEECCC-CCCCCHHHHHHHH-CCCCEEEEEECCCCCCCHHHHHHHH
T ss_conf 7999999980131045667--9999996598899970378-9826426678872-6786289961257888701789999
Q ss_pred HHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC----CCEEEECCCCCCCCCCC-EEEEECCCCHHHHCCHHHCHHH---
Q ss_conf 988641797899186201244320001232200----23567404565225674-4898336205650166465432---
Q gi|254780349|r 194 RSIADSIGAYLMADISHISGLVVGGQHPSPVPH----CHIVTTTTHKSLRGPRG-GLIMTNHADLAKKINSAIFPGL--- 265 (433)
Q Consensus 194 ~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~----ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~i~~avfPg~--- 265 (433)
.++|++.|+++++|++|.+|-+ |++. +|++++|.|| |.||+| |++..++. . ++..-+..|.
T Consensus 159 ~~~~~~~g~~~~vDa~Q~~g~~-------pidv~~~~~D~~~~S~hK-~~GP~G~G~Ly~r~~-~--~~~P~~~Gg~~e~ 227 (379)
T TIGR03402 159 GEIAKERGALFHTDAVQAVGKI-------PIDLKEMNIDMLSLSGHK-LHGPKGVGALYIRKG-T--RFRPLLRGGHQER 227 (379)
T ss_pred HHHHHHCCCEEEEECCCCCCCC-------CCCHHHHCCCCEECCHHH-CCCCCCEEEEEECCC-C--CCCCCCCCCCCCC
T ss_conf 9999763988994531124664-------640344157721202111-368872599998267-6--6687678888777
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCEE-EECCCCCCCCHHHHH
Q ss_conf ---234455666899999999735648999999998889999998616--85233458889812-631665567679999
Q gi|254780349|r 266 ---QGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL--GFDIVSGGTDNHLM-LVDLRSKRMTGKRAE 339 (433)
Q Consensus 266 ---qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~--G~~vv~ggTd~H~v-lvdl~~~~~~G~~a~ 339 (433)
-|.+....+++++.++..+. ........++-.-.+.|.+.|.+. +..+.+ ..+..+- .+.+.-.++++....
T Consensus 228 ~~~~GT~n~~~i~gl~~a~~~~~-~~~~~~~~~~~~l~~~l~~~ll~~~~~~~i~g-~~~~r~p~~~~~~~~~~~~~~i~ 305 (379)
T TIGR03402 228 GRRAGTENVPGIVGLGKAAELAT-EHLEEENTRVRALRDRLEAGLLARIPDARLNG-DPTKRLPNTVNISFEYIEGEAIL 305 (379)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC-CHHHCCCCCEEECCCCCCHHHHH
T ss_conf 76789712999999999999999-75999999999999999999985089827547-86664887303236998999999
Q ss_pred HHHHHCCEEEEC--CCCCCCCCC-----------CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 988856718803--789989999-----------888985122466673079998999999999999960
Q gi|254780349|r 340 SILGRVSITCNK--NSIPFDPES-----------PFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 340 ~~Le~~gI~~Nk--n~iP~D~~~-----------~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
..|++.||.+.- .+-++.-++ ....+.||++...-|| ++|++.+.+.+.+++.
T Consensus 306 ~~L~~~gI~v~~G~~Ca~~~~~ps~vL~a~g~~~~~~~g~iRvS~~~ynT----~edId~li~aL~~iv~ 371 (379)
T TIGR03402 306 LLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNT----EEDIDYVLEVLPPIIA 371 (379)
T ss_pred HHHCCCCEEEECCHHCCCCCCCHHHHHHHCCCCHHHCCCEEEEECCCCCC----HHHHHHHHHHHHHHHH
T ss_conf 98451892997503215999862499997599833339569997389999----9999999999999999
No 23
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.84 E-value=9.5e-18 Score=144.07 Aligned_cols=308 Identities=20% Similarity=0.205 Sum_probs=215.5
Q ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 02989999830510288657988875336006799999999999998718863010000167999999998315487488
Q gi|254780349|r 44 IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFM 123 (433)
Q Consensus 44 ~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il 123 (433)
-++|.+++++.. +| -|. --||.-.++.++| ++++++||-+-+ +=..||++||..++.++++||+.|+
T Consensus 9 ~p~p~m~~A~~~--A~---~gd---~~yg~D~~~~~le----~~~a~l~g~eaa-~f~~sGT~aN~~al~~~~~~~~~vi 75 (338)
T cd06502 9 GPTPEMLEAMAA--AN---VGD---DVYGEDPTTAKLE----ARAAELFGKEAA-LFVPSGTAANQLALAAHTQPGGSVI 75 (338)
T ss_pred CCCHHHHHHHHC--CC---CCC---CCCCCCHHHHHHH----HHHHHHHCCCEE-EEECCCCHHHHHHHHHHCCCCCEEE
T ss_conf 899999999980--63---678---6667898999999----999998489829-9807841899999998569997588
Q ss_pred ECCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH------HCCCEEEEECCC-CCCCC---CH
Q ss_conf 123344841114---766543333322013665832356598999999986------046678970552-43536---37
Q gi|254780349|r 124 GLSLDSGGHLTH---GSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIE------YNPKLIIVGGTA-YSRVW---DW 190 (433)
Q Consensus 124 ~~~l~~GGHlsh---g~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~------~kPklIi~G~S~-y~~~~---d~ 190 (433)
. ..-.|+.. |....++|.....+ ..+++.++.+.+++.++. .+|++|.+-++. +...+ ++
T Consensus 76 ~---~~~aHi~~~E~g~~~~~~G~~~~~~----~~~~g~l~~~~i~~~i~~~~~~h~~~~~lv~ient~e~G~v~~~~el 148 (338)
T cd06502 76 C---HETAHIYTDEAGAPEFLSGVKLLPV----PGENGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDEL 148 (338)
T ss_pred E---ECCCCEEEECCCCHHHHCCCEEEEE----ECCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEECCHHHH
T ss_conf 5---0467145653773998749625643----38999738999999631568864665207998731289631279999
Q ss_pred HHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCCCCCC---CCEEEECCCCCCCCCCCEEEEECCCCHHHHCCHHHCHHHH
Q ss_conf 999988641797899186201244-320001232200---2356740456522567448983362056501664654322
Q gi|254780349|r 191 ERFRSIADSIGAYLMADISHISGL-VVGGQHPSPVPH---CHIVTTTTHKSLRGPRGGLIMTNHADLAKKINSAIFPGLQ 266 (433)
Q Consensus 191 ~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~Pl~~---ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~avfPg~q 266 (433)
++++++|++.|.+|+.|+|++..- ++.|+ ++-++ +|+++.+-+|.+..|-|++|+.++ ++.++... -.-+
T Consensus 149 ~~i~~~a~~~gl~lH~DGARl~nA~~a~g~--~~~~~~~~~Dsvs~~~sKglgap~gavl~g~~-~~i~~a~~---~rK~ 222 (338)
T cd06502 149 KAISALAKENGLPLHLDGARLANAAAALGV--ALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNR-DFIARARR---RRKQ 222 (338)
T ss_pred HHHHHHHHHCCCEEEECCCCEECEEECCCC--CHHHHHHHCCEEEEECCCCCCCCCCEEEECCH-HHHHHHHH---HHHH
T ss_conf 999999997497266536530044541599--98998641878999665667774324787788-99999999---9986
Q ss_pred HHHHHHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHH---HH
Q ss_conf 3445566689999999973564-8999999998889999998616852334588898126316655676799999---88
Q gi|254780349|r 267 GGPFMHSIAAKAVAFGEALSSE-FRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAES---IL 342 (433)
Q Consensus 267 g~~~~~~iaa~aval~Ea~~~~-f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~---~L 342 (433)
.|..|.+.--+|.++..+++.. |.+-.++--+||+.|++.|.+.|+.+. ..++.++++++...+....+..+ .+
T Consensus 223 ~Gg~mrq~g~lAAa~~~~L~~~~~~~~l~~dh~~A~~La~~l~~~~~~~~--~~etniv~~~~~~~n~~~~~~~~~~~~~ 300 (338)
T cd06502 223 AGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEELGGLES--EVQTNIVLLDPVEANAVFVELSKEAIER 300 (338)
T ss_pred HCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 47536459999999999985483789999999999999999986799766--6657758983275418898746999999
Q ss_pred HHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 856718803789989999888985122466673079998999999999999
Q gi|254780349|r 343 GRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQ 393 (433)
Q Consensus 343 e~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~ 393 (433)
.+.|+.+. |++ +..+|+ +|.+...++|.+.+.+.|..
T Consensus 301 ~~~g~~~~----~~~------~~~vR~----Vt~~~~t~~dvd~~i~~ik~ 337 (338)
T cd06502 301 RGEGVLFY----AWG------EGGVRF----VTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHCCEEEE----ECC------CCEEEE----EECCCCCHHHHHHHHHHHHH
T ss_conf 96896999----469------992899----98899999999999999962
No 24
>PRK07505 hypothetical protein; Provisional
Probab=99.83 E-value=4.1e-17 Score=139.65 Aligned_cols=325 Identities=17% Similarity=0.165 Sum_probs=214.8
Q ss_pred CCCCCCCC----CHHHHHHHHCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHH
Q ss_conf 10430102----98999983051028865798887-53360067999999999999987188630100001679999999
Q gi|254780349|r 38 LIASENIV----SRAVLEAQGSILTNKYAEGYPSK-RYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVF 112 (433)
Q Consensus 38 LiASEN~~----S~~v~~~l~S~l~nkyaeG~pg~-ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~ 112 (433)
..+|.||+ .|.+.++...- ..+|--|.-+. +-.+..+...++| ++..++||.+ +-+ ..||..||++++
T Consensus 53 nF~SndYLGL~~hp~v~~aa~~a-~~~yG~g~~~s~~~~g~~~~h~~LE----~~LA~~~g~e-al~-f~sg~~An~g~i 125 (405)
T PRK07505 53 NFVSCSYLGLDNHPAIIDGAVDA-LRRTGVLDLSSSRTRVQSQILKDLE----ESLSELFGAS-VLT-FTSCSAAHLGIL 125 (405)
T ss_pred EEECCCCCCCCCCHHHHHHHHHH-HHHHCCCCCCCCCCCCCHHHHHHHH----HHHHHHHCCC-EEE-ECCHHHHHHHHH
T ss_conf 50435535888999999999999-9986889876486414839999999----9999873987-798-732689999999
Q ss_pred HHHH------CCCCEEEECCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 9831------548748812334484111476654333---3322013665832356598999999986046678970552
Q gi|254780349|r 113 LALM------HPGDSFMGLSLDSGGHLTHGSSVNMSG---KWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTA 183 (433)
Q Consensus 113 ~ALl------~pGD~Il~~~l~~GGHlshg~~~~~~g---~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~ 183 (433)
.+|. ..+|.|+. +.--|-| -....| ..-++..|+- -|++.++++++.++.++|++. ++
T Consensus 126 ~~Lasg~~~~~~~~~ii~---D~~~HaS---l~~~~g~~~s~a~~~~f~H------nD~~~Le~~~~~~~~~~iV~E-gV 192 (405)
T PRK07505 126 PLLASGHLTGGKPPHMVF---DKYAHAS---LAILKGICADETEVETIDH------NDLDALEDICKTNKRVAYVAD-GV 192 (405)
T ss_pred HHHHHCCCCCCCCCEEEE---ECCCCCC---HHHHHHHHCCCCCEEEECC------CCHHHHHHHHHHCCCCEEEEE-EE
T ss_conf 999722224899878999---8764378---4556677548996898679------999999998745699489998-42
Q ss_pred CCC--CCCHHHHHHHHHHCCCEEEECCCCHHHHHH---HH----CCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCHH
Q ss_conf 435--363799998864179789918620124432---00----012322002356740456522567448983362056
Q gi|254780349|r 184 YSR--VWDWERFRSIADSIGAYLMADISHISGLVV---GG----QHPSPVPHCHIVTTTTHKSLRGPRGGLIMTNHADLA 254 (433)
Q Consensus 184 y~~--~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa---~g----~~~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~e~~ 254 (433)
|+. ..|++++.++|+++|++|++|-||-.|.+- .| .+..+++..|++++|.-|.| |-.||.|+|.++++.
T Consensus 193 fSMGdiApL~~l~~L~~~y~a~L~vDEAH~~Gv~G~~GrG~~~~~~~~~~~~~~i~~gTlsKA~-Gs~GG~V~~g~~~~~ 271 (405)
T PRK07505 193 YSMGGIAPVKELVDLQDKYGLFVYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIATSLGKAF-GASGGVIMLGYAEQI 271 (405)
T ss_pred ECCCCHHHHHHHHHHHHHCCEEEEEECCCEECCCCCCCCCCHHHHHCCCCCCEEEEEEECCCHH-CCCCEEEEECCHHHH
T ss_conf 5589834599999998756769999652100120599972316875788884179980032100-156159997859999
Q ss_pred HHCCHHHCHHHHH-HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCC
Q ss_conf 5016646543223-445566689999999973564899999999888999999861685233458889812631665567
Q gi|254780349|r 255 KKINSAIFPGLQG-GPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRM 333 (433)
Q Consensus 255 ~~i~~avfPg~qg-~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~ 333 (433)
+-|.+.--|..-+ .+.+..+++...++.-...++...-.++.-+|.+.+.+.|.. . ..+++++.+.|-+.+..
T Consensus 272 ~~l~~~ar~~ifStal~p~~~aa~~as~~i~~~~e~~~~~~~L~~ni~~~~~~l~~---~--~~~s~~pI~~v~ig~~~- 345 (405)
T PRK07505 272 RLILRYAGPYAFSQPLNVAALGAISASAEIHLSSELDQLQQKLHNNIALFDSLIPT---E--QSGSFLPIRLIYIGDED- 345 (405)
T ss_pred HHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC---C--CCCCCCCEEEEEECCHH-
T ss_conf 99997184111366447999999999999985754799999999999999974587---7--78999987999949999-
Q ss_pred CHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 679999988856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 334 TGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 334 ~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
....+.+.|.+.||.++--.-|-= |.-.++|||...+ ...++|++++.+.+.+++.
T Consensus 346 ~a~~~~~~L~e~Gi~v~~i~~PtV---p~g~~rlRi~l~A----~hT~edId~l~~~L~~v~~ 401 (405)
T PRK07505 346 TAIKYAKQLKDAGFYTSPVFFPVV---AKGNAGLRIMFRA----DHTNEEIKRLCSLLKEILA 401 (405)
T ss_pred HHHHHHHHHHHCCCCEEEEECCCC---CCCCCEEEEEECC----CCCHHHHHHHHHHHHHHHH
T ss_conf 999999999978901875638838---9798249987488----8999999999999999999
No 25
>PRK09295 selenocysteine lyase; Validated
Probab=99.83 E-value=2.5e-17 Score=141.19 Aligned_cols=335 Identities=14% Similarity=0.140 Sum_probs=209.3
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC-CEECCCHHHHH-HHHHHHHH---
Q ss_conf 43010298999983051028865798887533600679999999999999871886-30100001679-99999998---
Q gi|254780349|r 40 ASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVN-FVNVQSHSGSQ-MNQGVFLA--- 114 (433)
Q Consensus 40 ASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~-~anvqp~SG~~-An~av~~A--- 114 (433)
|+...+++.|.+++..-+.+.|+.-..+ -|..|.+-.+. -+-+.++..+++||+ .-++=..||+. ++-.+..+
T Consensus 30 aAtt~~p~~Vi~a~~~~~~~~~~n~~~~-~~~~~~~a~~~-~e~aR~~iA~~lga~~~~eIvFts~~Tea~N~~~~~~~~ 107 (406)
T PRK09295 30 AASAQKPSQVIDAEAEFYRHGYAAVHRG-IHTLSAQATEK-MENVRKQASLFINARSAEELVFVRGTTEGINLVANSWGN 107 (406)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHHH-HHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHH
T ss_conf 8537899999999999998656988864-13899999999-999999999974999989699937816998888866688
Q ss_pred -HHCCCCEEEECCCCCCCCCCCCCCCC-C-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC-C-CCCCCCC
Q ss_conf -31548748812334484111476654-3-3333220136658323565989999999860466789705-5-2435363
Q gi|254780349|r 115 -LMHPGDSFMGLSLDSGGHLTHGSSVN-M-SGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGG-T-AYSRVWD 189 (433)
Q Consensus 115 -Ll~pGD~Il~~~l~~GGHlshg~~~~-~-~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~-S-~y~~~~d 189 (433)
.++|||.|+..+.+|-.-+ .+.. + .-.++++...++|+ ++.||.|.+++++. .+.|||.+.. | ......|
T Consensus 108 ~~~~~gd~vi~s~~EH~s~~---~pw~~l~~~~G~~v~~vp~~~-~g~id~~~l~~~i~-~~T~LVsv~~vsn~~G~i~p 182 (406)
T PRK09295 108 SNVRAGDNIIISEMEHHANI---VPWQMLCARVGAELRVIPLNP-DGTLQLETLPALFD-ERTRLLAITHVSNVLGTENP 182 (406)
T ss_pred HHCCCCCEEEEECCCCHHHH---HHHHHHHHHHCCEEEEEECCC-CCCCCHHHHHHHHC-CCCEEEEEEECCCCCCCCCC
T ss_conf 60589898999466428788---899999996496248980389-98485999998753-79639999713678887178
Q ss_pred HHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCCCCCCC-EEEEECCCCHHHHCCH-------
Q ss_conf 7999988641797899186201244320001232200--23567404565225674-4898336205650166-------
Q gi|254780349|r 190 WERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSLRGPRG-GLIMTNHADLAKKINS------- 259 (433)
Q Consensus 190 ~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~i~~------- 259 (433)
++++.++|++.|+++++|++|..|-+ |=.++. +|++++|.|| |.||.| |++..++ ++.+++.-
T Consensus 183 v~~I~~~~~~~g~~~~vDaaQ~~g~~-----~idv~~l~~D~~~~S~HK-l~GP~G~G~Lyv~~-~~~~~l~P~~~GG~~ 255 (406)
T PRK09295 183 LAEMIALAHQHGAKVLVDGAQAVMHH-----PVDVQALDCDFYVFSGHK-LYGPTGIGILYVKE-ALLQEMPPWEGGGSM 255 (406)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCCC-----CCCHHHHHCCEEEEEHHH-CCCCCCEEEEEECH-HHHHHCCCCCCCCCC
T ss_conf 99999988755854896423466810-----554666315479986142-26998149999833-456317863168863
Q ss_pred --------HHC----H--HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCEE
Q ss_conf --------465----4--32234455666899999999735648999999998889999998616-85233458889812
Q gi|254780349|r 260 --------AIF----P--GLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHLM 324 (433)
Q Consensus 260 --------avf----P--g~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~v 324 (433)
... | .-.|.+....|++++.|+....+-....-.+....-++.|.+.|.+. ++.+.+.......+
T Consensus 256 ~~~~~~~~~~~~~~~p~rfe~GT~n~~~i~gl~aAl~~~~~~g~~~i~~~~~~L~~~l~~~L~~~~~v~~~gp~~r~~iv 335 (406)
T PRK09295 256 IATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLEQVPDLTLYGPQNRLGVI 335 (406)
T ss_pred EEEECCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEE
T ss_conf 11003456755356522205888768899999999999997188999999999999999997369998995887755079
Q ss_pred EECCCCCCCCHHHHHHHHHHCCEEEEC---CCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 631665567679999988856718803---78998999988898512246667307999899999999999996
Q gi|254780349|r 325 LVDLRSKRMTGKRAESILGRVSITCNK---NSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 325 lvdl~~~~~~G~~a~~~Le~~gI~~Nk---n~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
-..+ .+.++......|++.||.+-- +..|--. .-..++.||++...-|| ++|++.+.+.+.++.
T Consensus 336 sf~~--~~~~~~~v~~~L~~~gI~vr~G~~Ca~~~~~-~~~~~~~iRvS~~~ynT----~eeId~lv~aL~~I~ 402 (406)
T PRK09295 336 AFNL--GKHHAYDVGSFLDNYGIAVRTGHHCAMPLMA-YYNVPAMCRASLAMYNT----HEEVDRLVAGLQRIH 402 (406)
T ss_pred EEEC--CCCCHHHHHHHHHHCCEEEECCHHHHHHHHH-HHCCCCEEEEECCCCCC----HHHHHHHHHHHHHHH
T ss_conf 9973--8989999999985499899763433304457-62899679997889999----999999999999999
No 26
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.83 E-value=4.7e-17 Score=139.23 Aligned_cols=337 Identities=16% Similarity=0.193 Sum_probs=216.8
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC-EECCCHHH-HHHHHHHHHHH-
Q ss_conf 0430102989999830510288657988875336006799999999999998718863-01000016-79999999983-
Q gi|254780349|r 39 IASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNF-VNVQSHSG-SQMNQGVFLAL- 115 (433)
Q Consensus 39 iASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~-anvqp~SG-~~An~av~~AL- 115 (433)
.|+...+++.|.++...-+.+.++ -|+..-|.......++-+-+.+++.+++|++- -+|=..|| |.++-.+..++
T Consensus 22 nAatt~~p~~V~~a~~~~~~~~~~--n~~~s~~~~~~~~~~~~e~aR~~iA~~lga~~~~~Iifts~~Te~~n~~~~~~~ 99 (398)
T TIGR03392 22 SAATALKPQAVIDATQQFYRLSSG--TVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESINLVAQSYA 99 (398)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHH
T ss_conf 863268989999999999986348--887514399999999999999999997095998979995877999998987768
Q ss_pred ---HCCCCEEEECCCCCCCCCCCCCC-CCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCC--CCCCC
Q ss_conf ---15487488123344841114766-543-333322013665832356598999999986046678970552--43536
Q gi|254780349|r 116 ---MHPGDSFMGLSLDSGGHLTHGSS-VNM-SGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTA--YSRVW 188 (433)
Q Consensus 116 ---l~pGD~Il~~~l~~GGHlshg~~-~~~-~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~--y~~~~ 188 (433)
++|||.|+..+.+|-.-+ .+ ... ....+++...+++. ++.+|.+.+++++. .+.+||.+..-. .....
T Consensus 100 ~~~~~~gd~ii~s~~EH~s~~---~pw~~~~~~~g~~v~~~~~~~-~~~~d~~~l~~~i~-~~T~lVsi~~vsn~~G~i~ 174 (398)
T TIGR03392 100 RPRLQPGDEIIVSEAEHHANL---IPWLMVAQQTGAKVVKLPIGA-DLLPDIRQLPELLT-PRTRILALGQMSNVTGGCP 174 (398)
T ss_pred HHHCCCCCEEEEECCCCCCCH---HHHHHHHHHCCCEEEEECCCC-CCCCCHHHHHHHCC-CCCCEEEEECCCCCCCCCC
T ss_conf 872399898998244003423---899988764485279961478-89879999998525-7870899825556788858
Q ss_pred CHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCCCCCCC-EEEEECCCCHHHHCCHHHCHH-
Q ss_conf 37999988641797899186201244320001232200--23567404565225674-489833620565016646543-
Q gi|254780349|r 189 DWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSLRGPRG-GLIMTNHADLAKKINSAIFPG- 264 (433)
Q Consensus 189 d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~i~~avfPg- 264 (433)
|++++.++|++.|+++++|++|.+|-+ |=.++. +|++++|.|| |.||+| |++..++ ++.+++.- .+.|
T Consensus 175 pi~~I~~~~~~~g~~~~vDa~Q~~g~~-----~idv~~~~~D~~~~S~hK-l~GP~G~G~Ly~~~-~~~~~l~p-~~~Gg 246 (398)
T TIGR03392 175 DLARAITLAHQYGAVVVVDGAQGVVHG-----PPDVQALDIDFYAFSGHK-LYGPTGIGVLYGKT-ELLEAMPP-WQGGG 246 (398)
T ss_pred CHHHHHHHHHHCCCEEEEECCCCCCCC-----CCCCCCCCCCEEEEECCC-CCCCCCEEEEEECC-HHHHHCCC-CCCCC
T ss_conf 799999999865974786334115620-----334102678779986553-56998418999841-14743797-35799
Q ss_pred --------------------HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCE
Q ss_conf --------------------2234455666899999999735648999999998889999998616-8523345888981
Q gi|254780349|r 265 --------------------LQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHL 323 (433)
Q Consensus 265 --------------------~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~ 323 (433)
-.|.+....+++++.++....+-......++...-++.+.+.|.+. |+.... --++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~r~e~GT~n~~~i~gl~~al~~l~~~~~~~~~~~~~~L~~~~~~~l~~l~g~~~~~-~~~~~~ 325 (398)
T TIGR03392 247 KMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFR-CPGSSL 325 (398)
T ss_pred CCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCE
T ss_conf 7344334777644555021146885487899999999999964999999999999999999986389964457-999967
Q ss_pred EEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCC--CCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 26316655676799999888567188037899899--998889851224666730799989999999999999602
Q gi|254780349|r 324 MLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDP--ESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 324 vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~--~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
+-+.+ .++...+....|.+.||.|.--.---.+ +.-..++.||++...-|| ++|++.+.+-|.++|+.
T Consensus 326 ~~f~~--~~~~~~~l~~~L~~~gi~v~~G~~ca~~~l~a~g~~g~iRvS~~~ynT----~edId~li~aL~~~l~~ 395 (398)
T TIGR03392 326 LAFDF--AGVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNT----QQDVDALVDAVGAALEL 395 (398)
T ss_pred EEEEE--CCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHCCCCEEEEECCCCCC----HHHHHHHHHHHHHHHHH
T ss_conf 99987--993999999999778979966866548999986899879996788889----99999999999999998
No 27
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.83 E-value=9.4e-18 Score=144.10 Aligned_cols=279 Identities=19% Similarity=0.183 Sum_probs=191.4
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHH-HCCCCEEEEC
Q ss_conf 899998305102886579888753360067999999999999987188630100001679999999983-1548748812
Q gi|254780349|r 47 RAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLAL-MHPGDSFMGL 125 (433)
Q Consensus 47 ~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~AL-l~pGD~Il~~ 125 (433)
.+|.+++.|. .++. -.++++.| ++.++.||++|| |=.-||+.|...++.|| ++|||.|+.+
T Consensus 18 ~~v~~~l~sg---~~~~----------G~~v~~FE----~~~a~~~g~k~a-v~v~sgT~AL~lal~al~i~~gdeVi~p 79 (379)
T PRK11658 18 AAVKEVLRSG---WITT----------GPKNQELE----QAFCQLTGNQHA-IAVSSATAGMHITLMALGIGPGDEVITP 79 (379)
T ss_pred HHHHHHHHCC---CCCC----------CHHHHHHH----HHHHHHHCCCEE-EEECCHHHHHHHHHHHCCCCCCCEEEEC
T ss_conf 9999999669---8678----------87799999----999999786949-9976889999999998698883999989
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEE
Q ss_conf 33448411147665433333220136658323565989999999860466789705524353637999988641797899
Q gi|254780349|r 126 SLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLM 205 (433)
Q Consensus 126 ~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~ 205 (433)
+...=. ..-.+.-.+...+.-++|+++..||.+.+++.+.. |+|.|+. ...|..|.|++++.+||++.|..|+
T Consensus 80 ~~tf~a-----t~~ai~~~Ga~pvf~Did~~t~~id~~~~e~~it~-~tkaIi~-Vh~~G~~~d~~~i~~i~~~~~i~vI 152 (379)
T PRK11658 80 SQTWVS-----TLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAIIP-VHYAGAPADLDAIRAIGERYGIPVI 152 (379)
T ss_pred CCCHHH-----HHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHCCC-CCEEEEE-ECCCCCCCCHHHHHHHHHHCCCEEE
T ss_conf 955699-----99999981998997457456535488999865482-6549998-5688986637799999997598189
Q ss_pred ECCCCHHHHHHHHCCCCCCCCCCEEEECCC--CCCCCCCCEEEEECCCCHHHHCCHHHCHHH---------HH-------
Q ss_conf 186201244320001232200235674045--652256744898336205650166465432---------23-------
Q gi|254780349|r 206 ADISHISGLVVGGQHPSPVPHCHIVTTTTH--KSLRGPRGGLIMTNHADLAKKINSAIFPGL---------QG------- 267 (433)
Q Consensus 206 ~D~aH~~GLIa~g~~~~Pl~~ADvvt~sTH--Ktl~GPrgGiI~~~~~e~~~~i~~avfPg~---------qg------- 267 (433)
.|+||..|---.|...--+. +-++|.| |.+..-.||||+||++++++++.+--.-|+ +|
T Consensus 153 EDaA~a~Ga~~~g~~~Gs~g---~a~fSF~~~K~ittGeGG~ivtnd~~l~~~~r~lr~hG~~~~~~~~~~~g~~~~~~~ 229 (379)
T PRK11658 153 EDAAHAVGTYYKGRHIGARG---TAIFSFHAIKNITCAEGGLIVTDDEELADRLRMLKFHGLGVDAYDRQTQGRAPQAEV 229 (379)
T ss_pred ECCHHHHCCCCCCCCCCCCC---CEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEE
T ss_conf 70835536654798667624---457856666678777874999699999999999997798865134430378886226
Q ss_pred -----HHHHHHH-HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCCC---CCEEEECCCCC--CCC
Q ss_conf -----4455666-899999999735648999999998889999998616852334--5888---98126316655--676
Q gi|254780349|r 268 -----GPFMHSI-AAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVS--GGTD---NHLMLVDLRSK--RMT 334 (433)
Q Consensus 268 -----~~~~~~i-aa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~--ggTd---~H~vlvdl~~~--~~~ 334 (433)
+..|+.+ ||++.+-.+ .+.+..++-.++|+..-+.|...++..+. .+.. -|+..+.+.+. +.+
T Consensus 230 ~~~G~N~rm~elqAAigl~qL~----~ld~~~~~R~~ia~~Y~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 305 (379)
T PRK11658 230 LEPGYKYNLADINAAIALVQLQ----KLEALNARRRAIAAQYLQALAALPFQPLSLPAWPHQHAWHLFIIRVDEERCGIS 305 (379)
T ss_pred EECCCCCCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECHHHCCCC
T ss_conf 6556136777787999999999----999999999999999999726899866678898874110789999864635448
Q ss_pred HHHHHHHHHHCCEEEECCCCCCC
Q ss_conf 79999988856718803789989
Q gi|254780349|r 335 GKRAESILGRVSITCNKNSIPFD 357 (433)
Q Consensus 335 G~~a~~~Le~~gI~~Nkn~iP~D 357 (433)
=.+..+.|.+.||-+...-.|..
T Consensus 306 Rd~l~~~L~~~gI~t~~~y~p~h 328 (379)
T PRK11658 306 RDALMEALKERGIGTGLHFRAAH 328 (379)
T ss_pred HHHHHHHHHHCCCCEEEECCCCC
T ss_conf 99999999977998120274200
No 28
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.82 E-value=1.2e-17 Score=143.30 Aligned_cols=329 Identities=17% Similarity=0.197 Sum_probs=214.7
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHCCCC-CEECCCHHHHH-HHHHHHHHH-
Q ss_conf 4301029899998305102886579888-7533600679999999999999871886-30100001679-999999983-
Q gi|254780349|r 40 ASENIVSRAVLEAQGSILTNKYAEGYPS-KRYYGGCQYVDDIENIAIERAKKLFNVN-FVNVQSHSGSQ-MNQGVFLAL- 115 (433)
Q Consensus 40 ASEN~~S~~v~~~l~S~l~nkyaeG~pg-~ryy~G~~~~d~iE~la~~~a~~lF~a~-~anvqp~SG~~-An~av~~AL- 115 (433)
|+...+.|.|.+++-.-+.+.|+ -|+ .-|..|-+--+.+| -+.++..++||++ .-+|=..||+. |+-.+..++
T Consensus 6 aatt~~~~~V~~~~~~~~~~~~~--np~~~~~~~~~~a~~~le-~aR~~ia~~lg~~~~~eI~fts~aTea~n~~~~~l~ 82 (373)
T cd06453 6 AATSQKPQPVIDAIVDYYRHYNA--NVHRGVHELSARATDAYE-AAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLG 82 (373)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCC--CCCCHHHHHHHHHHHHHH-HHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHH
T ss_conf 76468999999999999997589--987305099999999999-999999997496998979991886799878865302
Q ss_pred --HCCCCEEEECCCCCCCCCCCCCCCC-C-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECC--CCCCCCC
Q ss_conf --1548748812334484111476654-3-33332201366583235659899999998604667897055--2435363
Q gi|254780349|r 116 --MHPGDSFMGLSLDSGGHLTHGSSVN-M-SGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGT--AYSRVWD 189 (433)
Q Consensus 116 --l~pGD~Il~~~l~~GGHlshg~~~~-~-~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S--~y~~~~d 189 (433)
.+|||+|+..+.+|..-+ .+.. . ...+.++...++|+ ++.||.|++++.+. .+.+||.+-.- ......|
T Consensus 83 ~~~~~gd~Vi~s~~EH~s~~---~p~~~la~~~G~~v~~ip~~~-~G~i~~~~l~~~i~-~~T~lV~~~~v~n~tG~~~p 157 (373)
T cd06453 83 RANKPGDEIVTSVMEHHSNI---VPWQQLAERTGAKLKVVPVDD-DGQLDLEALEKLLT-ERTKLVAVTHVSNVLGTINP 157 (373)
T ss_pred HCCCCCCEEEECCCCCCCHH---HHHHHHHHHCCCEEEEECCCC-CCCCCHHHHHHHCC-CCCEEEEEECCCCCCCCCCC
T ss_conf 02699998997601112427---899999870595898507897-88588999997545-89569999785667760887
Q ss_pred HHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCCCCCCC-EEEEECCCCHHHHCCHHHCHH--
Q ss_conf 7999988641797899186201244320001232200--23567404565225674-489833620565016646543--
Q gi|254780349|r 190 WERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSLRGPRG-GLIMTNHADLAKKINSAIFPG-- 264 (433)
Q Consensus 190 ~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~i~~avfPg-- 264 (433)
++++.++|++.|+++++|++|.+|-+ |=.+.. +|++++|.|| +.||+| |++..++ ++..++.-...-|
T Consensus 158 i~~I~~~~~~~g~~~~vDa~Qa~g~~-----~idv~~~~~D~~~~s~hK-~~GP~G~G~Lyv~~-~~~~~l~p~~~gg~~ 230 (373)
T cd06453 158 VKEIGEIAHEAGVPVLVDGAQSAGHM-----PVDVQDLGCDFLAFSGHK-MLGPTGIGVLYGKE-ELLEEMPPYGGGGEM 230 (373)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCCC-----CCCHHHHHCCEEEEECHH-CCCCCCEEEEEECC-HHHHCCCCCCCCCCC
T ss_conf 99999999874976998762124554-----651777627738976101-15888349999860-145247833168875
Q ss_pred ------------------HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCEEE
Q ss_conf ------------------2234455666899999999735648999999998889999998616-852334588898126
Q gi|254780349|r 265 ------------------LQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHLML 325 (433)
Q Consensus 265 ------------------~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~vl 325 (433)
-.|.+....+++++.++..........-.++...-++.|.+.|.+. |+.+++.. +.+.=.
T Consensus 231 ~~~~~~~~~~~~~~~~rfe~GT~n~~~i~~l~~al~~~~~~g~~~i~~~~~~L~~~l~~~L~~l~~v~i~~~~-~~r~~i 309 (373)
T cd06453 231 IEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDA-EDRAGV 309 (373)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC-CCCCCE
T ss_conf 3332343222255522025567558899999999999998489999999999999999999638997624884-556888
Q ss_pred ECCCCCCCCHHHHHHHHHHCCEEEEC---CCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf 31665567679999988856718803---78998999988898512246667307999899999999
Q gi|254780349|r 326 VDLRSKRMTGKRAESILGRVSITCNK---NSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGE 389 (433)
Q Consensus 326 vdl~~~~~~G~~a~~~Le~~gI~~Nk---n~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~ 389 (433)
+-+.-.+.++.++...|++.||.|-- +.-|-- +.-..++.||++...-|| ++|++.+.+
T Consensus 310 vsf~~~~~~~~~v~~~L~~~gI~vs~G~~Ca~~~~-~~~g~~g~iRvS~~~ynt----~~dId~li~ 371 (373)
T cd06453 310 VSFNLEGIHPHDVATILDQYGIAVRAGHHCAQPLM-RRLGVPGTVRASFGLYNT----EEEIDALVE 371 (373)
T ss_pred EEEEECCCCHHHHHHHHHHCCEEEECCCCCCHHHH-HHHCCCCEEEEECCCCCC----HHHHHHHHH
T ss_conf 99996995999999999679929978633244889-972899879996888899----999999995
No 29
>pfam01276 OKR_DC_1 Orn/Lys/Arg decarboxylase, major domain.
Probab=99.82 E-value=4.4e-18 Score=146.41 Aligned_cols=268 Identities=18% Similarity=0.171 Sum_probs=185.8
Q ss_pred HHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---
Q ss_conf 99999999987188630100001679999999983154874881233448411147665433333220136658323---
Q gi|254780349|r 81 ENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED--- 157 (433)
Q Consensus 81 E~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~--- 157 (433)
-.-|.++|.++||++++-.=...-|.+|+++++|+++|||+|+.. .--|-|-=....++|..-..+ ++.+.+.
T Consensus 68 I~eAq~~aA~~fga~~t~flvnGsT~g~~a~i~a~~~~Gd~Vlv~---RN~HkSv~~al~l~g~~Pvyl-~p~~~~~gi~ 143 (417)
T pfam01276 68 IKEAQKYAARVFGADKSYFVVNGTSGANKTVGMAVCTPGDTVLID---RNCHKSIHHALMMSGATPVYL-EPTRNAYGII 143 (417)
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEE---CCCHHHHHHHHHHCCCEEEEE-CCCCCCCCCC
T ss_conf 999999999983999369984683099999999743899989971---641899999999869858995-3642434661
Q ss_pred -----CCCCHHHHHHHHHHHC----CCE-EEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-
Q ss_conf -----5659899999998604----667-89705524353637999988641797899186201244320001232200-
Q gi|254780349|r 158 -----GLLDMHEIESLAIEYN----PKL-IIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH- 226 (433)
Q Consensus 158 -----~~ID~d~~~~~a~~~k----Pkl-Ii~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~- 226 (433)
..++.+.+++.++++. |++ ++.-.+.|....|++++.++|++.|..|++|.||-+=+--....++.++.
T Consensus 144 ~~i~~~~~~~e~~~~~l~~~p~~k~~~~v~lt~PtY~G~~~di~~i~~~~h~~~~~llvDEAhGah~~F~plp~~a~~~g 223 (417)
T pfam01276 144 GGIPLHEFQEETIKEALAEVPPAKGPRLAVITNGTYDGTIYNAKEIVDTLGHLSDYILFDSAWVGYEQFIPIYADASPMG 223 (417)
T ss_pred CCCCHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHCC
T ss_conf 58882545999999999858765685089998999870652899999998633987999788752024687833466567
Q ss_pred CC-------EEEECCCCCCCCC-CCEEEEECCCC-H-HHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf 23-------5674045652256-74489833620-5-6501664654322344556668999999997356489999999
Q gi|254780349|r 227 CH-------IVTTTTHKSLRGP-RGGLIMTNHAD-L-AKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQI 296 (433)
Q Consensus 227 AD-------vvt~sTHKtl~GP-rgGiI~~~~~e-~-~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qv 296 (433)
|| +|+.||||||++- |+.++..++.. + .++++.+.-=-..++|----+|++=+|-..+...++++..++.
T Consensus 224 ad~~~~~~~~vvqS~HKtL~altQ~s~Lh~~~~~~~~~~~~~~~l~~~qTTSPsY~lmASLD~ar~~m~~~~G~~l~~~~ 303 (417)
T pfam01276 224 GDNVNDPGIIVTQSVHKLLAAFSQASQIHKKDSHIVNHKRFNEAFMMHTSTSPFYPIVASLDVAAAMMEGNSGRRLWQES 303 (417)
T ss_pred CCCCCCCCEEEEEEHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88666772279861111354304343212167877899999999997738874899999999999997535549999999
Q ss_pred HHHHHHHHHHHHHC----CCCCC-----CC-----------------------CCCCCEEEE---------CCCCCCCCH
Q ss_conf 98889999998616----85233-----45-----------------------888981263---------166556767
Q gi|254780349|r 297 VLNSQALAKKLQFL----GFDIV-----SG-----------------------GTDNHLMLV---------DLRSKRMTG 335 (433)
Q Consensus 297 v~NA~~La~~L~~~----G~~vv-----~g-----------------------gTd~H~vlv---------dl~~~~~~G 335 (433)
++.|..+.+.+.+. +|+++ ++ ..|.--+.| +++..|++|
T Consensus 304 i~~a~~~R~~i~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~hg~~~~~~~~~~lDptKltI~t~g~~~~g~~~~~GisG 383 (417)
T pfam01276 304 LERAIEFRKEIKTLNDGEFFRPWNPEIVDGKECWPFHPGEKWHGFEGYDDNQYFLDPIKLTILTPGIDETGEYEEFGVPA 383 (417)
T ss_pred HHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCH
T ss_conf 99999999999864578522036710047710102476532135555555542577856999807868776333239779
Q ss_pred HHHHHHHHHCCEEEECC
Q ss_conf 99999888567188037
Q gi|254780349|r 336 KRAESILGRVSITCNKN 352 (433)
Q Consensus 336 ~~a~~~Le~~gI~~Nkn 352 (433)
.++++.|++.||.+-+.
T Consensus 384 ~~v~~~Lre~gI~~E~~ 400 (417)
T pfam01276 384 TIVAKYLREHGIVPEKT 400 (417)
T ss_pred HHHHHHHHHCCCEEEEC
T ss_conf 99999999869889866
No 30
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.82 E-value=2.8e-19 Score=154.74 Aligned_cols=161 Identities=25% Similarity=0.359 Sum_probs=124.2
Q ss_pred HHHHHHHHCCC--CCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC
Q ss_conf 99999987188--630100001679999999983154874881233448411147665433333220136658323-565
Q gi|254780349|r 84 AIERAKKLFNV--NFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-GLL 160 (433)
Q Consensus 84 a~~~a~~lF~a--~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~~I 160 (433)
+.++..++|++ +++-+-+ ||+.||.+++.+|++|||.|+..+..+++++. ......| .+...++.+++. ..+
T Consensus 5 ~e~~la~~~~~~~~~~i~~~-sgt~A~~~~~~~l~~~gd~vi~~~~~~~s~~~--~~~~~~g--~~~~~~~~~~~~~~~~ 79 (170)
T cd01494 5 LEEKLARLLQPGNDKAVFVP-SGTGANEAALLALLGPGDEVIVDANGHGSRYW--VAAELAG--AKPVPVPVDDAGYGGL 79 (170)
T ss_pred HHHHHHHHHCCCCCEEEEEC-HHHHHHHHHHHHHHCCCCEEEECCCCHHHHHH--HHHHHCC--CEEEEECCCCCCCCCC
T ss_conf 99999998489989899956-69999999999972799999982684375689--9998659--8778723477875546
Q ss_pred CHHHHHHHHHHHCCCEEEEECCC--CCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEECCCCCC
Q ss_conf 98999999986046678970552--4353637999988641797899186201244320001232200235674045652
Q gi|254780349|r 161 DMHEIESLAIEYNPKLIIVGGTA--YSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHIVTTTTHKSL 238 (433)
Q Consensus 161 D~d~~~~~a~~~kPklIi~G~S~--y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt~sTHKtl 238 (433)
|.+.+++.....+|++|++.... .....|+++++++|+++|+++++|++|..|-+..+.+..+...+|++++|.||+|
T Consensus 80 ~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~l~~I~~la~~~gi~livD~a~~~g~~~~~~~~~~~~~~D~~~~s~hK~l 159 (170)
T cd01494 80 DVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFSLHKNL 159 (170)
T ss_pred CHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHCCCCCCCCCCCCCCCEEEEECCCCCC
T ss_conf 89999998559996368877401478732019999735620796999946843216066666777789859998986667
Q ss_pred CCCCCEEEEEC
Q ss_conf 25674489833
Q gi|254780349|r 239 RGPRGGLIMTN 249 (433)
Q Consensus 239 ~GPrgGiI~~~ 249 (433)
.||+||+++.|
T Consensus 160 g~~g~g~l~~~ 170 (170)
T cd01494 160 GGEGGGVVIVK 170 (170)
T ss_pred CCCCEEEEEEC
T ss_conf 89857999989
No 31
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=5.7e-17 Score=138.67 Aligned_cols=335 Identities=19% Similarity=0.220 Sum_probs=228.6
Q ss_pred CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC-CEECCCHHHHHH-HHHHHHHH---HC
Q ss_conf 10298999983051028865798887533600679999999999999871886-301000016799-99999983---15
Q gi|254780349|r 43 NIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVN-FVNVQSHSGSQM-NQGVFLAL---MH 117 (433)
Q Consensus 43 N~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~-~anvqp~SG~~A-n~av~~AL---l~ 117 (433)
...+..|.++..--+.+-|+....|. |.-.+...+..+-+.+.+++++|++ ..+|=..+|+.- --.+..++ ++
T Consensus 32 ~~~p~~V~~a~~~~~~~~~an~~r~~--~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~~ 109 (405)
T COG0520 32 SQKPQAVLDAVAEYYRRYNANVHRGA--HTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSLK 109 (405)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHC
T ss_conf 66788999999999997402457554--4127999999999999999981999877299959837999999997024106
Q ss_pred CCCEEEECCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCC--CCCCCCHHHH
Q ss_conf 48748812334484111476654333--3322013665832356598999999986046678970552--4353637999
Q gi|254780349|r 118 PGDSFMGLSLDSGGHLTHGSSVNMSG--KWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTA--YSRVWDWERF 193 (433)
Q Consensus 118 pGD~Il~~~l~~GGHlshg~~~~~~g--~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~--y~~~~d~~~l 193 (433)
|||.|+..+++|-..+ .+-.... .+.++...+++ +++.+|.|.+++ ....++|+|.+..-+ .....|+++|
T Consensus 110 ~gdeIv~s~~EH~sn~---~pw~~~~~~~Ga~v~~i~~~-~~g~~~~d~~~~-~i~~~Tklvais~vSn~tG~~~pv~~I 184 (405)
T COG0520 110 PGDEIVVSDLEHHSNI---VPWQELAKRTGAKVRVIPLD-DDGLLDLDALEK-LITPKTKLVALSHVSNVTGTVNPVKEI 184 (405)
T ss_pred CCCEEEEECCCCCCCH---HHHHHHHHHCCCEEEEEECC-CCCCCCHHHHHH-HCCCCCEEEEEECCCCCCCCCCCHHHH
T ss_conf 8998998046552008---99999998759689998418-999728899986-469994499996641675540409999
Q ss_pred HHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCCCCCCC-EEEEECCCCHHHHC-------------
Q ss_conf 988641797899186201244320001232200--23567404565225674-48983362056501-------------
Q gi|254780349|r 194 RSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSLRGPRG-GLIMTNHADLAKKI------------- 257 (433)
Q Consensus 194 ~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~i------------- 257 (433)
.++|+++|+++++|+||.+|- +|-.+.. +|++.+|.||-|.||.| |++..++ ++-+++
T Consensus 185 ~~la~~~ga~v~VDaaq~~~h-----~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~-~~l~~l~P~~~gg~~~~~~ 258 (405)
T COG0520 185 AELAHEHGALVLVDAAQAAGH-----LPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRK-ELLEELEPFLGGGGMIEYV 258 (405)
T ss_pred HHHHHHCCCEEEEECCCCCCC-----CCCCHHHCCCCEEEECCCCCCCCCCCEEEEEECH-HHHHHCCCCCCCCCCEEEC
T ss_conf 999998499899977133475-----6688556189899976743257998529999866-5584378977788724401
Q ss_pred C--------HHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCEEEECC
Q ss_conf 6--------64654322344556668999999997356489999999988899999986168-52334588898126316
Q gi|254780349|r 258 N--------SAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLG-FDIVSGGTDNHLMLVDL 328 (433)
Q Consensus 258 ~--------~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G-~~vv~ggTd~H~vlvdl 328 (433)
+ ..-.-.--|.|+...+.+++.|+.....-.+..-.+.....+..+.+.|.+.. +.+.+-..+.-.-++.+
T Consensus 259 ~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF 338 (405)
T COG0520 259 SRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSF 338 (405)
T ss_pred CCCCCCEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEE
T ss_conf 44555301564153155784378898699999999985799999999999999999985489849964663467746999
Q ss_pred CCCCCCHHHHHHHHHHCCEEEEC---CCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 65567679999988856718803---78998999988898512246667307999899999999999996
Q gi|254780349|r 329 RSKRMTGKRAESILGRVSITCNK---NSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 329 ~~~~~~G~~a~~~Le~~gI~~Nk---n~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
+-.++...+....|...||.+-. +..|. .+-...++.+|++..--+| ++|++.+.+-+.+++
T Consensus 339 ~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~-~~~~~~~~~iR~S~~~YNt----~edid~l~~aL~~~~ 403 (405)
T COG0520 339 NVKGIHPHDVATLLDEKGIAVRAGHHCAQPL-HRLLGVDATIRASLHLYNT----EEDVDRLLEALKKAL 403 (405)
T ss_pred EECCCCHHHHHHHHHHCCEEEEECCCCCHHH-HHHCCCCCCEEEEEECCCC----HHHHHHHHHHHHHHH
T ss_conf 9789598999999986786998256443267-8753777757999742599----999999999999874
No 32
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PMID:11123951), so we use this designation.
Probab=99.81 E-value=6.7e-17 Score=138.17 Aligned_cols=332 Identities=16% Similarity=0.215 Sum_probs=215.6
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC-EECCCHHH-HHHHHHHHHHH--
Q ss_conf 430102989999830510288657988875336006799999999999998718863-01000016-79999999983--
Q gi|254780349|r 40 ASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNF-VNVQSHSG-SQMNQGVFLAL-- 115 (433)
Q Consensus 40 ASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~-anvqp~SG-~~An~av~~AL-- 115 (433)
|+...++|.|.+++..-+.+.|+ -|..-|..|.+--..+ +-+.++..+++|++. -+|=..|| +-+|-.+..++
T Consensus 6 aAtt~~~~~Vi~~~~~~~~~~~~--Np~s~h~~~~~a~~~~-e~aR~~ia~~l~a~~~~eIvFTsg~Tea~N~~~~gl~~ 82 (382)
T TIGR03403 6 NATTMLDPKVKELMDPFFCDIYG--NPNSLHQFGTATHPAI-AEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYF 82 (382)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHH-HHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHH
T ss_conf 35689999999999999986689--9632539999999999-99999999975969978699938758999999999999
Q ss_pred ---H-CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC-C-CCCCCCC
Q ss_conf ---1-54874881233448411147665433333220136658323565989999999860466789705-5-2435363
Q gi|254780349|r 116 ---M-HPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGG-T-AYSRVWD 189 (433)
Q Consensus 116 ---l-~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~-S-~y~~~~d 189 (433)
. +++|.|+....+|--.+. ....+.-..+++...++|. +|.+|+|++++++. .+++||.+.. | ...-..|
T Consensus 83 ~~~~~~~~~~ii~s~~EH~sv~~--~~~~l~~~G~~v~~~~~d~-~G~~d~~~l~~~l~-~~T~LVai~~anN~tG~i~p 158 (382)
T TIGR03403 83 DEILKGGKNHIITTEVEHPAVRA--TCAFLESLGVEVTYLPINE-QGTITAEQVREAIT-EKTALVSVMWANNETGMIFP 158 (382)
T ss_pred HHHHCCCCCEEEEECCCCHHHHH--HHHHHHHCCCEEEEECCCC-CCCCCHHHHHHHCC-CCCCEEEEECCCCCCCCCCC
T ss_conf 98636899999995565153899--9999996597899977599-98588999997601-46606776314767777787
Q ss_pred HHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCCCCCCC-EEEEECCCCHHHHCCHHHCH---
Q ss_conf 7999988641797899186201244320001232200--23567404565225674-48983362056501664654---
Q gi|254780349|r 190 WERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSLRGPRG-GLIMTNHADLAKKINSAIFP--- 263 (433)
Q Consensus 190 ~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~i~~avfP--- 263 (433)
++++.++|++.|+++++|++|.+|-+ |=.++. +|++++|.|| +.||+| |+++.++. + ++.. .++
T Consensus 159 v~~I~~~~~~~g~~~~vDa~Q~~g~~-----pidv~~l~~D~l~~S~HK-~~GP~GiG~L~ir~~-~--~l~P-~~~Gg~ 228 (382)
T TIGR03403 159 IKEIGEICKERGVLFHTDAVQAIGKI-----PVDVQKAGVDFLSFSAHK-FHGPKGVGGLYIRKG-V--ELTP-LFHGGE 228 (382)
T ss_pred HHHHHHHHHHCCCEEEEEHHHHCCCC-----CCCCCCCCCCEEEEEHHH-CCCCCCEEEEEECCC-C--CCCC-CCCCCC
T ss_conf 99999999872987996713413564-----643232346524531010-368883499998677-7--6587-658987
Q ss_pred ---HH-HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCC---CEEEECCCCCCCCH
Q ss_conf ---32-234455666899999999735648999999998889999998616-85233458889---81263166556767
Q gi|254780349|r 264 ---GL-QGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDN---HLMLVDLRSKRMTG 335 (433)
Q Consensus 264 ---g~-qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~---H~vlvdl~~~~~~G 335 (433)
+. -|.+....|++++.|+..+. ........++-+-.+.|.+.|.+. +..+++ ..++ |.+.+- -.++++
T Consensus 229 ~~~~~r~GT~n~~~i~~l~~A~~~~~-~~~~~~~~~~~~L~~~l~~~L~~i~~~~i~g-~~~~r~p~~~~~~--~~~i~~ 304 (382)
T TIGR03403 229 HMGGRRSGTLNVPYIVAMGEAMRLAN-EYLDFEKSHVRRLRDRLEDALLELPDVFVVG-DREHRVPNTILIS--IKGVEG 304 (382)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC-CHHHCCCCEEEEE--CCCCCH
T ss_conf 74761279867889999999999999-9899999999999999999998177946716-8332588579862--799898
Q ss_pred HHHHHHHHHCCEEEECC--CCCCCCCC-C----------CCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99999888567188037--89989999-8----------88985122466673079998999999999999960
Q gi|254780349|r 336 KRAESILGRVSITCNKN--SIPFDPES-P----------FITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 336 ~~a~~~Le~~gI~~Nkn--~iP~D~~~-~----------~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
......|++.||.+.-- +-.++.++ + ...+.||++...-|| ++|++.+.+.+.+++.
T Consensus 305 ~~~~~~L~~~gI~v~~GsaCas~~~~~s~vl~a~g~~~~~~~~~vR~S~~~ynT----~eeId~~i~~l~~~v~ 374 (382)
T TIGR03403 305 EAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTT----EEEIDYTIEVFKKAVQ 374 (382)
T ss_pred HHHHHHHCCCCEEEECHHHHCCCCCCCCHHHHHCCCCHHHCCCEEEEECCCCCC----HHHHHHHHHHHHHHHH
T ss_conf 999998470997997557728998875899997199854459579997589999----9999999999999999
No 33
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.81 E-value=1.3e-17 Score=143.05 Aligned_cols=264 Identities=20% Similarity=0.206 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHH-HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 67999999999999987188630100001679999999983-15487488123344841114766543333322013665
Q gi|254780349|r 75 QYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLAL-MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNV 153 (433)
Q Consensus 75 ~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~AL-l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~ 153 (433)
.++++.| ++.++.||++|+ |=..||+.|...++.+| +++||.|+.++...=. ...+ +.-.++..+..++
T Consensus 18 ~~v~~fE----~~~~~~~g~k~~-v~~~sgt~Al~lal~~l~~~~gdeVi~p~~t~~a---t~~a--i~~~G~~pv~~Di 87 (352)
T cd00616 18 PKVREFE----KAFAEYLGVKYA-VAVSSGTAALHLALRALGIGPGDEVIVPSFTFVA---TANA--ILLLGATPVFVDI 87 (352)
T ss_pred HHHHHHH----HHHHHHHCCCEE-EEECCHHHHHHHHHHHCCCCCCCEEEECCCCCHH---HHHH--HHHCCCEEEEEEC
T ss_conf 7699999----999999785939-9976889999999998697883999989976398---9999--9985998998407
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCC-CCCEEEE
Q ss_conf 832356598999999986046678970552435363799998864179789918620124432000123220-0235674
Q gi|254780349|r 154 RKEDGLLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVP-HCHIVTT 232 (433)
Q Consensus 154 d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~-~ADvvt~ 232 (433)
|+++..||.+++++.+ ..++|.|++ ...|.++.|+++++++|++.|..|+.|+||..|-.-.|. |+. +.|+-++
T Consensus 88 ~~~t~~id~~~l~~~i-~~~tkaIi~-vh~~G~~~d~~~i~~~~~~~~i~lIeDaA~a~Gs~~~~~---~~G~~gd~~~f 162 (352)
T cd00616 88 DPDTYNIDPELIEAAI-TPRTKAIIP-VHLYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGR---KVGTFGDAGAF 162 (352)
T ss_pred CCCCCCCCHHHHHHHC-CCCCCEEEE-ECCCCCCCCHHHHHHHHHHCCCEEEEHHHHHCCCCCCCE---ECCCCCCCCCC
T ss_conf 7785775889999762-868709999-689898668899999999779899802200216834671---25664342534
Q ss_pred CCC--CCCCCCCCEEEEECCCCHHHHCCHHHCHHHHH------------HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 045--65225674489833620565016646543223------------4455666899999999735648999999998
Q gi|254780349|r 233 TTH--KSLRGPRGGLIMTNHADLAKKINSAIFPGLQG------------GPFMHSIAAKAVAFGEALSSEFRDYAKQIVL 298 (433)
Q Consensus 233 sTH--Ktl~GPrgGiI~~~~~e~~~~i~~avfPg~qg------------~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~ 298 (433)
|.| |.+..-.||+|+||++++++++..--..|... +..|..+.| ++.-.+-..+....++-.+
T Consensus 163 SF~~~K~it~geGG~i~tn~~~~~~~~~~lr~~G~~~~~~~~~~~~~G~N~rmsel~A---aigl~qLk~ld~~~~~R~~ 239 (352)
T cd00616 163 SFHPTKNLTTGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQA---AIGLAQLEKLDEIIARRRE 239 (352)
T ss_pred CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_conf 4787756767773499969999999999999659669988524673683422588899---9999999988999999999
Q ss_pred HHHHHHHHHHHC-CCCCCC--CCCC--CCEEEECCCCC-CCCHHHHHHHHHHCCEEEECCCCCC
Q ss_conf 889999998616-852334--5888--98126316655-6767999998885671880378998
Q gi|254780349|r 299 NSQALAKKLQFL-GFDIVS--GGTD--NHLMLVDLRSK-RMTGKRAESILGRVSITCNKNSIPF 356 (433)
Q Consensus 299 NA~~La~~L~~~-G~~vv~--ggTd--~H~vlvdl~~~-~~~G~~a~~~Le~~gI~~Nkn~iP~ 356 (433)
|++..-+.|.+. ++.+.. .++. -|+..+-+.+. ...-.+..+.|.+.||-+...-.|.
T Consensus 240 i~~~Y~~~L~~~~~i~~~~~~~~~~~~~~~~~i~l~~~~~~~R~~l~~~L~~~gI~~~~~y~p~ 303 (352)
T cd00616 240 IAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHYPPL 303 (352)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCH
T ss_conf 9999999837899816166699983355799999865021059999999998799858028333
No 34
>pfam01041 DegT_DnrJ_EryC1 DegT/DnrJ/EryC1/StrS aminotransferase family. The members of this family are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA, StsC, and StsS. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase EC:2.6.1.50, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin.
Probab=99.81 E-value=1.5e-17 Score=142.67 Aligned_cols=259 Identities=20% Similarity=0.196 Sum_probs=186.0
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHH-HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 067999999999999987188630100001679999999983-1548748812334484111476654333332201366
Q gi|254780349|r 74 CQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLAL-MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 74 ~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~AL-l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
-+++.+.| ++.++.||.+|+ |=.-||+.|.+.++.|+ ++|||.|+.++...=. ..-.+.-.+...+..+
T Consensus 24 G~~v~~fE----~~~~~~~g~k~~-v~~~sgT~Al~lal~a~~~~~gdeVi~p~~t~~a-----t~~ai~~~G~~pvf~D 93 (363)
T pfam01041 24 GPEVREFE----KEFAAYLGVKHA-VAVSSGTAALHLALRALGIGPGDEVIVPSFTFVA-----TANAVLYLGAKPVFVD 93 (363)
T ss_pred CHHHHHHH----HHHHHHHCCCEE-EEECCHHHHHHHHHHHCCCCCCCEEEECCCCCHH-----HHHHHHHCCCEEEEEE
T ss_conf 98999999----999999784959-9975889999999998598892999979977598-----8999998699799850
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCC-CCCEEE
Q ss_conf 5832356598999999986046678970552435363799998864179789918620124432000123220-023567
Q gi|254780349|r 153 VRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVP-HCHIVT 231 (433)
Q Consensus 153 ~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~-~ADvvt 231 (433)
+|+++..||.+.+++.+. .++|.||+ ...|..+.|+++++++|++.|..|+.|+||..|-.-.|. ++. +.|+-+
T Consensus 94 vd~~t~~id~~~l~~~i~-~~tkaIi~-vh~~G~~~d~~~i~~~~~~~~i~lIEDaA~a~Ga~~~gk---~~G~~gd~~~ 168 (363)
T pfam01041 94 IDPDTYNIDPAAIEAAIT-PRTKAIMP-VHLYGQPADMDAIRAIAAEHGLPVIEDAAHAHGATYKGK---RVGTFGDAAT 168 (363)
T ss_pred CCCCCCCCCHHHHHHHCC-CCCCEEEE-ECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCE---ECCCCCCCCE
T ss_conf 645656858999998607-58709998-789898689999999999849999973132026765865---4356445210
Q ss_pred ECCC--CCCCCCCCEEEEECCCCHHHHCCHHHCHHHH--------------HHHHHHHH-HHHHHHHHHHHCHHHHHHHH
Q ss_conf 4045--6522567448983362056501664654322--------------34455666-89999999973564899999
Q gi|254780349|r 232 TTTH--KSLRGPRGGLIMTNHADLAKKINSAIFPGLQ--------------GGPFMHSI-AAKAVAFGEALSSEFRDYAK 294 (433)
Q Consensus 232 ~sTH--Ktl~GPrgGiI~~~~~e~~~~i~~avfPg~q--------------g~~~~~~i-aa~aval~Ea~~~~f~~Ya~ 294 (433)
+|.| |.+..-.||||+||++++++++..-..-|.. .+..|..+ ||++.+ +-..+....+
T Consensus 169 fSF~~~K~ittGeGG~i~tnd~~l~~~~r~lr~~G~~~~~~~~~~~~~~~G~N~rmseiqAaigl~----qL~~l~~~~~ 244 (363)
T pfam01041 169 FSFFPTKNITTGEGGAVVTDDPELAERARCLRNHGCGRPANKRYRHEVPLGYNYRMTELQAAIGLA----QLERLDEFIA 244 (363)
T ss_pred EECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH----HHHHHHHHHH
T ss_conf 205787654468970999699999999999996596889877522450677556767889999999----9999999999
Q ss_pred HHHHHHHHHHHHHHHC-CCCCCC---CCCC--CCEEEECCCCC-CCCHHHHHHHHHHCCEEEEC
Q ss_conf 9998889999998616-852334---5888--98126316655-67679999988856718803
Q gi|254780349|r 295 QIVLNSQALAKKLQFL-GFDIVS---GGTD--NHLMLVDLRSK-RMTGKRAESILGRVSITCNK 351 (433)
Q Consensus 295 qvv~NA~~La~~L~~~-G~~vv~---ggTd--~H~vlvdl~~~-~~~G~~a~~~Le~~gI~~Nk 351 (433)
+-.+|++.+-+.|... ++.++. +.+. -|.+.+-+... ..+-.+..+.|.+.||-+..
T Consensus 245 ~R~~i~~~Y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~R~~l~~~L~~~gI~t~~ 308 (363)
T pfam01041 245 RRREIAERYQELLAELPGFEPLTLPTEEDDHAWHLFPVLVPEEAAGSRDELVEALKEAGIGTRV 308 (363)
T ss_pred HHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 9999999999985789994106868888751479999997643423399999999987995586
No 35
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.80 E-value=7.1e-17 Score=138.00 Aligned_cols=304 Identities=19% Similarity=0.196 Sum_probs=215.9
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHH-HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 067999999999999987188630100001679999999983-1548748812334484111476654333332201366
Q gi|254780349|r 74 CQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLAL-MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 74 ~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~AL-l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
-.++.+.|+ ...+.+|++||- -.-||+.|...++.|| ++|||.|+..+...=.. ... +.-.+.+.++-+
T Consensus 33 G~~v~~FE~----~~ae~~G~k~av-a~~sgT~AL~laL~al~ig~GDeVI~ps~TfvAT---an~--i~~~Ga~PVFvD 102 (374)
T COG0399 33 GPFVRRFEQ----AFAEYLGVKYAV-AVSSGTAALHLALLALAIGPGDEVIVPSFTFVAT---ANA--VLLVGAKPVFVD 102 (374)
T ss_pred CHHHHHHHH----HHHHHHCCCEEE-EECCHHHHHHHHHHHCCCCCCCEEEECCCCHHHH---HHH--HHHCCCEEEEEE
T ss_conf 867899999----999984997399-9668489999999964879999799368753988---999--997699679996
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCC-CCCEEE
Q ss_conf 5832356598999999986046678970552435363799998864179789918620124432000123220-023567
Q gi|254780349|r 153 VRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVP-HCHIVT 231 (433)
Q Consensus 153 ~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~-~ADvvt 231 (433)
+|+++++||.+.+|+-+. .|+|-||. ...|..+.|++.+++||+++|.+++.|+||-.|-.-.|. .+. ..|+-+
T Consensus 103 id~~T~nid~~~ie~aIt-~~tKAIip-Vhl~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk---~vGt~Gd~~~ 177 (374)
T COG0399 103 IDPDTLNIDPDLIEAAIT-PRTKAIIP-VHLAGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGK---KVGSFGDIGA 177 (374)
T ss_pred CCCCCCCCCHHHHHHHCC-CCCEEEEE-EHHCCCCCCHHHHHHHHHHCCCEEEEECCHHCCCEECCC---CCCCCCCEEE
T ss_conf 476414779999998715-57749998-512168779899999998739849987603206723584---2556664689
Q ss_pred ECCC--CCCCCCCCEEEEECCCCHHHHCCHHHCHHHHHH-------------H-HHHHHHHHHHHHHHHHCHHHHHHHHH
Q ss_conf 4045--652256744898336205650166465432234-------------4-55666899999999735648999999
Q gi|254780349|r 232 TTTH--KSLRGPRGGLIMTNHADLAKKINSAIFPGLQGG-------------P-FMHSIAAKAVAFGEALSSEFRDYAKQ 295 (433)
Q Consensus 232 ~sTH--Ktl~GPrgGiI~~~~~e~~~~i~~avfPg~qg~-------------~-~~~~iaa~aval~Ea~~~~f~~Ya~q 295 (433)
+|.| |.+.--.||+|+|||+++++++..--+-|.... . ..+--||++++-.+- ..+...+
T Consensus 178 fSF~~~K~ittgEGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~----l~~~~~~ 253 (374)
T COG0399 178 FSFHATKNLTTGEGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLER----LDEINER 253 (374)
T ss_pred EEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH----HHHHHHH
T ss_conf 986587765566750798388999999999998376778665643521330038779999999999988----8999999
Q ss_pred HHHHHHHHHHHHHHCC-CCC--CCCC--CCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCC----
Q ss_conf 9988899999986168-523--3458--889812631665567679999988856718803789989999888985----
Q gi|254780349|r 296 IVLNSQALAKKLQFLG-FDI--VSGG--TDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSG---- 366 (433)
Q Consensus 296 vv~NA~~La~~L~~~G-~~v--v~gg--Td~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sG---- 366 (433)
=-++++...+.|.+.. +.+ ...+ .--|+..+-+...+.+-......|.+.||.+..-..|-...+.+...+
T Consensus 254 R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~ 333 (374)
T COG0399 254 RREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEGISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPE 333 (374)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCC
T ss_conf 99999999998610787433578987612303668982677778999999998678775166313443266650445666
Q ss_pred ------CCCCCHH---HHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf ------1224666---73079998999999999999960
Q gi|254780349|r 367 ------IRLGTPS---GTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 367 ------iRlGT~a---iTtrG~~e~em~~iA~li~~~L~ 396 (433)
=+++... ...-+|.++|+++|.+.+.+++.
T Consensus 334 ~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 334 GDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLG 372 (374)
T ss_pred CCCCHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 788228899617487258999899999999999999850
No 36
>TIGR00858 bioF 8-amino-7-oxononanoate synthase; InterPro: IPR004723 8-amino-7-oxononanoate synthase (2.3.1.47 from EC) is involved in biotin biosynthesis. Synonym(s): AONS, 8-amino-7-ketopelargonate synthase, 7-keto-8-amino-pelargonic acid synthetase, 7-KAP synthetase; GO: 0008710 8-amino-7-oxononanoate synthase activity, 0009102 biotin biosynthetic process.
Probab=99.79 E-value=1.1e-16 Score=136.55 Aligned_cols=316 Identities=21% Similarity=0.235 Sum_probs=226.2
Q ss_pred CCCCCC----CCHHHHHHHHCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHH
Q ss_conf 043010----298999983051028865798887533600-679999999999999871886301000016799999999
Q gi|254780349|r 39 IASENI----VSRAVLEAQGSILTNKYAEGYPSKRYYGGC-QYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFL 113 (433)
Q Consensus 39 iASEN~----~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~-~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ 113 (433)
.+|.|| -+|.|.++..-....+|.=|=-|-|==-|. ....++| ++..+.++.+=|=| .-||..||++|..
T Consensus 28 FsSNDYLGLa~hp~l~~af~~~~~~~~G~Gs~aSrLv~G~~~~H~~LE----~~lA~~kg~EaALl-FsSGY~AN~Gvi~ 102 (378)
T TIGR00858 28 FSSNDYLGLASHPELIQAFAQQAAEQYGAGSTASRLVTGNSPLHEELE----EELAEFKGTEAALL-FSSGYLANVGVIS 102 (378)
T ss_pred CCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH----HHHHHHHCCCCEEE-EHHHHHHHHHHHH
T ss_conf 136440100379889999999999866877367434037856899999----99998628820342-0027899999999
Q ss_pred HHHC-----CCCEEEECC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC--C--CEEEE
Q ss_conf 8315-----487488123-----34484111476654333332201366583235659899999998604--6--67897
Q gi|254780349|r 114 ALMH-----PGDSFMGLS-----LDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYN--P--KLIIV 179 (433)
Q Consensus 114 ALl~-----pGD~Il~~~-----l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~k--P--klIi~ 179 (433)
||++ +||.|++=. +-+|.-||+.. ++.|+ ..|++.++++.++++ . +||+-
T Consensus 103 aL~~~~~l~~~DlilsD~LNHASl~dG~rLS~A~----------~~~y~------H~D~~~L~~lL~~~~g~~~~~livT 166 (378)
T TIGR00858 103 ALVGKRVLEKGDLILSDALNHASLIDGCRLSGAR----------VLRYR------HNDVEHLERLLEKNRGKERRKLIVT 166 (378)
T ss_pred HHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCC----------EEECC------CCCHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 8751576567860442025477789864159862----------78706------8998999999974015137768897
Q ss_pred ECCCCCCC---CCHHHHHHHHHHCCCEEEECCCCHHHHHHH---HCC-CCCCCC--CCEEEECCCCCCCCCCCEEEEECC
Q ss_conf 05524353---637999988641797899186201244320---001-232200--235674045652256744898336
Q gi|254780349|r 180 GGTAYSRV---WDWERFRSIADSIGAYLMADISHISGLVVG---GQH-PSPVPH--CHIVTTTTHKSLRGPRGGLIMTNH 250 (433)
Q Consensus 180 G~S~y~~~---~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~---g~~-~~Pl~~--ADvvt~sTHKtl~GPrgGiI~~~~ 250 (433)
+ ++|+.. .|+++|.++|++++||||+|-||-.|-+.. |.. -=+++. -||+.+|--|-|.+ .||.++|..
T Consensus 167 D-GVFSMDGD~APL~~L~~la~~~~A~L~VDDAHgtGVlG~~G~G~~~~fgl~~~~~~i~~GTlSKAlGs-~Ga~V~g~~ 244 (378)
T TIGR00858 167 D-GVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPAPVDIQVGTLSKALGS-YGAYVAGSE 244 (378)
T ss_pred C-CEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEECCHHHHH-CHHHHHHHH
T ss_conf 0-01316888489789999998709889998654536628875414976598888726998613166540-525635458
Q ss_pred CCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCCCCCEEEEC
Q ss_conf 2056501664654322344556668999999997356489999999988899999986168---5233458889812631
Q gi|254780349|r 251 ADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLG---FDIVSGGTDNHLMLVD 327 (433)
Q Consensus 251 ~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G---~~vv~ggTd~H~vlvd 327 (433)
.=..=-||+|=---++.+.-+..++|.--||.-.. ++-..--+++.+|++.|.+.|+..| |.+ ..++|-++.|=
T Consensus 245 ~l~~yL~n~AR~~If~TaLPPa~~aA~~aAl~~i~-~~~~~rr~~L~~~~~~~~~~l~~~~~~~f~~--~~~~TPI~P~~ 321 (378)
T TIGR00858 245 ALIDYLINRARTFIFSTALPPAVVAAALAALELIQ-EEEPWRREKLLALIARLRKGLEALGKLVFQL--MPSETPIVPVI 321 (378)
T ss_pred HHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEE--CCCCCCCEEEE
T ss_conf 99999984157642323665889999999999722-2486478999999999999987547663101--67898625887
Q ss_pred CCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCC---CCCCCHHHHHCCCCHHHHHHHHHHH
Q ss_conf 665567679999988856718803789989999888985---1224666730799989999999999
Q gi|254780349|r 328 LRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSG---IRLGTPSGTTRGFKEKDFEYIGELI 391 (433)
Q Consensus 328 l~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sG---iRlGT~aiTtrG~~e~em~~iA~li 391 (433)
+-+. -+--++++.|.+.||.|--- |||.+|.| |||-..+- +.++|++.+++-|
T Consensus 322 ~G~~-~~al~~a~~L~~~G~~v~AI------RPPTVP~G~sRLR~Tl~A~----Ht~~di~~L~~~l 377 (378)
T TIGR00858 322 IGDE-ESALALAEELQEQGIFVGAI------RPPTVPKGTSRLRLTLSAA----HTEGDIDRLLEAL 377 (378)
T ss_pred ECCC-HHHHHHHHHHHHCCCEEECC------CCCCCCCCCCEEEEEEEEC----CCHHHHHHHHHHC
T ss_conf 0892-89999999998779479102------5888877961045577404----8988999999973
No 37
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.78 E-value=1.9e-16 Score=134.99 Aligned_cols=262 Identities=16% Similarity=0.153 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHH-HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 67999999999999987188630100001679999999983-15487488123344841114766543333322013665
Q gi|254780349|r 75 QYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLAL-MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNV 153 (433)
Q Consensus 75 ~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~AL-l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~ 153 (433)
.++++.|+ ..++.||++|| |-.-||+.|-..++.++ ++|||.|+.++...= +..-.+.-.+...+.-++
T Consensus 31 ~~v~~fE~----~~a~~~g~~~a-v~v~sgT~AL~lal~~l~i~~gdeVivp~~tf~-----at~~ai~~~Ga~pvfvDi 100 (375)
T PRK11706 31 GFTRRCQQ----WLEQRFGCAKV-LLTPSCTAALEMAALLLDIQPGDEVIMPSYTFV-----STANAFVLRGAKIVFVDI 100 (375)
T ss_pred HHHHHHHH----HHHHHHCCCEE-EEECCHHHHHHHHHHHCCCCCCCEEEECCCCHH-----HHHHHHHHCCCEEEEEEE
T ss_conf 79999999----99999784939-996788999999999869889399998996649-----999999983996999971
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCC-CCCEEEE
Q ss_conf 832356598999999986046678970552435363799998864179789918620124432000123220-0235674
Q gi|254780349|r 154 RKEDGLLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVP-HCHIVTT 232 (433)
Q Consensus 154 d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~-~ADvvt~ 232 (433)
|++++.||.+.+++.+. .|+|.|+. ...|..+.|++++++||++.|..|+.|+||..|---.|. ++. ..|+-++
T Consensus 101 d~~t~~id~~~ie~~it-~ktkaIi~-Vh~~G~~~d~~~I~~iak~~~i~vIEDaA~a~Gs~~~g~---~~Gt~Gd~~~f 175 (375)
T PRK11706 101 RPDTMNIDETLIEAAIT-PKTRAIVP-VHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGR---ALGTIGHLGCF 175 (375)
T ss_pred CCCCCCCCHHHHHHHHC-CCCEEEEE-ECCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCE---ECCCCCCCCCC
T ss_conf 68757767899998708-67549999-678898667899999885379089834400368766764---45767998885
Q ss_pred CCC--CCCCCCCCEEEEECCCCHHHHCC--------HHHC-HHHH---------HHHHHHH-HHHHHHHHHHHHCHHHHH
Q ss_conf 045--65225674489833620565016--------6465-4322---------3445566-689999999973564899
Q gi|254780349|r 233 TTH--KSLRGPRGGLIMTNHADLAKKIN--------SAIF-PGLQ---------GGPFMHS-IAAKAVAFGEALSSEFRD 291 (433)
Q Consensus 233 sTH--Ktl~GPrgGiI~~~~~e~~~~i~--------~avf-Pg~q---------g~~~~~~-iaa~aval~Ea~~~~f~~ 291 (433)
|.| |.+..-.||+|+||++++++++. +.-| .|.. .+..|.. -||++.+ +-..+.+
T Consensus 176 SF~~~K~ittGeGG~i~tnd~~l~~~~~~lr~~G~~~~~~~~g~~~~y~~~~~G~N~rms~lqAAigl~----QL~~ld~ 251 (375)
T PRK11706 176 SFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWA----QLEAADR 251 (375)
T ss_pred CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHH----HHHHHHH
T ss_conf 898898787768749997999999999999982876157655787664154047646788899999999----9998899
Q ss_pred HHHHHHHHHHHHHHHHHHC----CCCCC--CCC-C-CCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCC
Q ss_conf 9999998889999998616----85233--458-8-8981263166556767999998885671880378998
Q gi|254780349|r 292 YAKQIVLNSQALAKKLQFL----GFDIV--SGG-T-DNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPF 356 (433)
Q Consensus 292 Ya~qvv~NA~~La~~L~~~----G~~vv--~gg-T-d~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~ 356 (433)
..++-.++++...+.|... ++.+. ..+ + -.|++.+-+.+.. +=.+..+.|.+.||.+...-.|-
T Consensus 252 ~~~~R~~i~~~Y~~~L~~l~~~~~i~~p~~~~~~~~~~~~~~i~~~~~~-~Rd~l~~~L~~~gI~t~~~y~Pl 323 (375)
T PRK11706 252 INQQRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDIE-DRSALINFLKEAGIMAVFHYIPL 323 (375)
T ss_pred HHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCEEEEEEEEEECCHH-HHHHHHHHHHHCCCCEEECCCCC
T ss_conf 9999999999999973051012861045579998330057999956777-89999999998799832447344
No 38
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level HMM (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.78 E-value=1.1e-15 Score=129.73 Aligned_cols=326 Identities=17% Similarity=0.144 Sum_probs=215.9
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC--C-EECCCHHHHHHHHHHH
Q ss_conf 881043010298999983051028865798887533600679999999999999871886--3-0100001679999999
Q gi|254780349|r 36 IQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVN--F-VNVQSHSGSQMNQGVF 112 (433)
Q Consensus 36 l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~--~-anvqp~SG~~An~av~ 112 (433)
|=|+|.=--++|.|++++.-++++|-.| +.++-.-+.++.++||+.. | +-+-+-||+.|+-++.
T Consensus 1 lL~~PGP~~v~~~V~~am~~~~~HRs~~-------------F~~i~~~~~~~L~~l~~~~~~~~v~~l~gsGt~a~Ea~~ 67 (355)
T TIGR03301 1 ILLTPGPLSTSATVRDAMLVDWCHWDSE-------------FNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATI 67 (355)
T ss_pred CCCCCCCCCCCHHHHHHHCCCCCCCCHH-------------HHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHH
T ss_conf 9765899999999999718777889889-------------999999999989999589998479999165599999999
Q ss_pred HHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-CCCEEEE--ECCCCCCCCC
Q ss_conf 983154874881233448411147665433333220136658323565989999999860-4667897--0552435363
Q gi|254780349|r 113 LALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEY-NPKLIIV--GGTAYSRVWD 189 (433)
Q Consensus 113 ~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~-kPklIi~--G~S~y~~~~d 189 (433)
..++.|||+++.+. .|..+....-.+.....++..+...+ ...+|++++++.+++. ..+.+.+ .-++.....|
T Consensus 68 ~nl~~~g~~vlv~~---~G~fg~r~~~~a~~~g~~~~~~~~~~-g~~~~~~~v~~~l~~~~~~~~v~~~h~ETstGv~~~ 143 (355)
T TIGR03301 68 GSLVPRDGKLLVLI---NGAYGERLAKICEYLGIPHTDLNFSE-YEPPDLNRIEEALAADPDITHVATVHHETTTGILNP 143 (355)
T ss_pred HHCCCCCCEEEEEE---CCHHHHHHHHHHHHHCCCEEEEECCC-CCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC
T ss_conf 85236798799995---48899999999998299669973688-778998999999725778548999501267874175
Q ss_pred HHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCCCCCCC-EEEEECCCCHHHHCCH---HH-C
Q ss_conf 7999988641797899186201244320001232200--23567404565225674-4898336205650166---46-5
Q gi|254780349|r 190 WERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSLRGPRG-GLIMTNHADLAKKINS---AI-F 262 (433)
Q Consensus 190 ~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~i~~---av-f 262 (433)
++++.++|+++|+++++|+....| ..|=+++. .|++.++.+|-|.||.| ++++.+++ ..++... .. |
T Consensus 144 ~~~i~~~~~~~~~llvVDavSs~g-----~~p~d~~~~gvD~~~~~sQK~l~~ppGl~~v~~~~~-~~~~~~~~~~~~y~ 217 (355)
T TIGR03301 144 LEAIAKVARSHGAVLIVDAMSSFG-----AIPIDIEELDVDALIASANKCLEGVPGFGFVIARRD-LLEASAGNARSLYL 217 (355)
T ss_pred HHHHHHHHCCCCCEEEEECCCCCC-----CCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECHH-HHHHCCCCCCCCCC
T ss_conf 376656650479649997456435-----686420115658999536555678887578886699-99751379876663
Q ss_pred H-----------H-HHHHHHHHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCEEE-EC
Q ss_conf 4-----------3-223445566689999999973564-8999999998889999998616852334-588898126-31
Q gi|254780349|r 263 P-----------G-LQGGPFMHSIAAKAVAFGEALSSE-FRDYAKQIVLNSQALAKKLQFLGFDIVS-GGTDNHLML-VD 327 (433)
Q Consensus 263 P-----------g-~qg~~~~~~iaa~aval~Ea~~~~-f~~Ya~qvv~NA~~La~~L~~~G~~vv~-ggTd~H~vl-vd 327 (433)
+ | +--.|-.+.|.++..+|.+..... .....++.-+.|+++-+.+.+.||+++. ....+..+. +.
T Consensus 218 dl~~~~~~~~~~g~~~~Tppv~~i~al~~al~~i~~eGGl~~~~~r~~~~a~~l~~~l~~lgl~~~~~~~~~s~~vt~~~ 297 (355)
T TIGR03301 218 DLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPIIVSFL 297 (355)
T ss_pred CHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEE
T ss_conf 58999988634798787885499999999999999723799999999999999999999869943589156498669998
Q ss_pred CC-CCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 66-556767999998885671880378998999988898512246667307999899999999999996
Q gi|254780349|r 328 LR-SKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 328 l~-~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
+. ..+.+..+..+.|.+.||++-+.. . .. ..++|||.-- .+.++|+..+.+.|.++|
T Consensus 298 ~p~~~~~d~~~~~~~l~~~g~~i~~G~-----~-~~-~~~fRig~mG----~~~~~dv~~ll~~le~~L 355 (355)
T TIGR03301 298 YPDDPDFDFDDFYQELKERGFVIYPGK-----L-TL-ADTFRIGTIG----EIDAADIERLLEAIKDAL 355 (355)
T ss_pred CCCCCCCCHHHHHHHHHHCCEEEECCC-----C-CC-CCEEEEECCC----CCCHHHHHHHHHHHHHHC
T ss_conf 899888579999999997790785787-----6-77-9989898189----999999999999999769
No 39
>pfam00155 Aminotran_1_2 Aminotransferase class I and II.
Probab=99.78 E-value=2.4e-16 Score=134.36 Aligned_cols=329 Identities=18% Similarity=0.203 Sum_probs=208.7
Q ss_pred HCCCCCCCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC---EECCCHHHHHHH
Q ss_conf 38881043010--2989999830510288657988875336006799999999999998718863---010000167999
Q gi|254780349|r 34 DEIQLIASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNF---VNVQSHSGSQMN 108 (433)
Q Consensus 34 ~~l~LiASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~---anvqp~SG~~An 108 (433)
+-|||-..|+. ++|.|++|+.-.+.+--.. -|+-.+-..++.+-..+...+-++.+. .+|-..||+++.
T Consensus 2 d~i~l~~~~~~~~~~p~v~~A~~~a~~~~~~~------~Y~~~~G~~~LR~aia~~~~~~~~~~~~~e~~I~~t~G~~~~ 75 (351)
T pfam00155 2 DKINLGSNEYLGDTLPAVAKAEKDALAGGTRN------LYGPTDGLPELREALAKFLGRSPVLKLDREAAVVFGSGAGAN 75 (351)
T ss_pred CEEEEECCCCCCCCCHHHHHHHHHHHCCCCCC------CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHH
T ss_conf 70893389999998899999999997499998------079818789999999998601029999947489981139999
Q ss_pred H-HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHCCCEEEEECCCCC-
Q ss_conf 9-99998315487488123344841114766543333322013665832-35659899999998604667897055243-
Q gi|254780349|r 109 Q-GVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKE-DGLLDMHEIESLAIEYNPKLIIVGGTAYS- 185 (433)
Q Consensus 109 ~-av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~-~~~ID~d~~~~~a~~~kPklIi~G~S~y~- 185 (433)
+ .++.++++|||.|+..++...++.. .+.....+.++++.+++ +..+|++++++.++ .++|+|++.....|
T Consensus 76 l~~~~~~l~~~gd~Vli~~P~y~~~~~-----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~P~NPT 149 (351)
T pfam00155 76 IEALIFLLANPGDAILVPAPTYASYIR-----IARLAGGEVVRYPLYDSNDFHLDFDALEAALK-EKPKVVLHESPHNPT 149 (351)
T ss_pred HHHHHHHHCCCCCEEEECCCCCHHHHH-----HHHHCCCEEEEEECCCCCCCCCCHHHHHHHCC-CCCEEEEECCCCCCC
T ss_conf 999999966994999988998688999-----99983997789845643477989999997541-598699988991987
Q ss_pred -CCC---CHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC----C-CEEEECCCCCC--CCCCCEEEEECCCCHH
Q ss_conf -536---37999988641797899186201244320001232200----2-35674045652--2567448983362056
Q gi|254780349|r 186 -RVW---DWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH----C-HIVTTTTHKSL--RGPRGGLIMTNHADLA 254 (433)
Q Consensus 186 -~~~---d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~----A-Dvvt~sTHKtl--~GPrgGiI~~~~~e~~ 254 (433)
..+ .++++.++|.+.+++++.|.+|.....-+..+.+++.. - -++..|.-|+| +|=|-|.+..++ ++.
T Consensus 150 G~~~~~~~l~~l~~~a~~~~~~ii~DE~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~i~~~~-~~i 228 (351)
T pfam00155 150 GTVAPLEELEKLLDLAKEHNILLLVDEAYAGFVFGSPDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNA-AVI 228 (351)
T ss_pred CCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCCCHHHHCCCCCCEEEEECCHHHCCCCCCCEEEEEECH-HHH
T ss_conf 7776889999998653028889998266333152798886133311457867999136152379351559999899-999
Q ss_pred HHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCC
Q ss_conf 50166465432234455666899999999735648999999998889999998616852334588898126316655676
Q gi|254780349|r 255 KKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMT 334 (433)
Q Consensus 255 ~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~ 334 (433)
+++.+..-+...+++. ...++.+..-.+......+++.++..++.+.|.+.|.+.|+.+... .-+-.+|+++... .+
T Consensus 229 ~~l~~~~~~~~~s~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~p-~g~~~~~~~~~~~-~~ 305 (351)
T pfam00155 229 SQLRKLARPFYSSTHL-QAAAAAALSDPLLVASELEEMRQRIKERRDYLRDGLEAAGLSVLPS-QAGFFLLTGLDPE-TA 305 (351)
T ss_pred HHHHHHHCCCCCCHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC-CCEEEEEEECCCC-CH
T ss_conf 9999971668747899-9999999958455689999999999999999999998789857279-9449999978732-29
Q ss_pred HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf 7999998885671880378998999988898512246667307999899999999
Q gi|254780349|r 335 GKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGE 389 (433)
Q Consensus 335 G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~ 389 (433)
-.-++..|++.||.+.--..+ ..++-|||...+ ..++++++..+
T Consensus 306 ~~~~~~Ll~~~gV~v~pG~~f------g~~~~iRis~a~-----~s~e~i~~~~~ 349 (351)
T pfam00155 306 KELAQVLLEEVGVYVTPGSSP------GVPGWLRITVAG-----GTEEELEELLE 349 (351)
T ss_pred HHHHHHHHHCCCEEEECCCCC------CCCCEEEEEECC-----CCHHHHHHHHH
T ss_conf 999999997598999778888------999908998178-----99999999994
No 40
>PRK06220 consensus
Probab=99.78 E-value=1.8e-15 Score=128.16 Aligned_cols=357 Identities=18% Similarity=0.155 Sum_probs=219.6
Q ss_pred HHHHHHHHHHCHHHHHHH-HHHHHHH---HHCCCCCCCC-CC-CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 677646978589999999-9999999---8388810430-10-2989999830510288657988875336006799999
Q gi|254780349|r 8 RFFQQSLIESDPDVFSLI-GQESCRQ---NDEIQLIASE-NI-VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIE 81 (433)
Q Consensus 8 ~~~~~~l~~~Dpei~~~i-~~e~~rq---~~~l~LiASE-N~-~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE 81 (433)
.++.+.++...|....-| +.-.+.+ ++-|+|-..+ .+ +++.+.+++.-.+.. |.- .|+-..-..++-
T Consensus 2 ~~ls~r~~~~~~s~~~~i~~~a~~~~~~G~dvi~l~iG~pdf~~p~~i~~a~~~~~~~----~~~---~Y~~~~G~~~lr 74 (384)
T PRK06220 2 CMISKRVEDIKPFYVMDVLERAQELERQGRDIIHLEVGEPDFPTPECVCEAACAAIER----GLT---HYTHSLGLPELR 74 (384)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHC----CCC---CCCCCCCCHHHH
T ss_conf 4789998668965999999999999966998079999889999789999999999854----999---989997869999
Q ss_pred HHHHHHHHHHCCCC--CEECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 99999999871886--30100001679-999999983154874881233448411147665433333220136658323-
Q gi|254780349|r 82 NIAIERAKKLFNVN--FVNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED- 157 (433)
Q Consensus 82 ~la~~~a~~lF~a~--~anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~- 157 (433)
+...+..++-||.+ .-||-..+|++ |...++.+|++|||.|+..+...-++.. .... ...+.+.++++.++
T Consensus 75 eaia~~~~~~~g~~~~pd~I~vt~G~~~al~~~~~~l~~pGD~Vlv~~P~Y~~~~~---~~~~--~g~~~v~v~~~~~~~ 149 (384)
T PRK06220 75 EAIAEHYRRRYGVDVDPDQVIVTSGTSPAMLMVFMALLNKGDEVILSDPHYACYPN---FVKF--LGGTPVFVPVYEEDG 149 (384)
T ss_pred HHHHHHHHHHHCCCCCHHEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHH---HHHH--CCCEEEEECCCCCCC
T ss_conf 99999999986899880128986888999999999981899989977898876399---9998--498399922463237
Q ss_pred CCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCC--EEEEC
Q ss_conf 5659899999998604667897055243--5363799998864179789918620124432000123220023--56740
Q gi|254780349|r 158 GLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCH--IVTTT 233 (433)
Q Consensus 158 ~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~AD--vvt~s 233 (433)
..+|.|++++.+ ..+.|+|++.....| +.++-+++++|++- +.+++.|..| ..|+-.|...+++.+.| ++.+|
T Consensus 150 ~~~d~~~l~~~~-~~~~k~i~l~~P~NPtG~v~s~e~l~~l~~~-~~~vIsDEiY-~~l~~~~~~~s~~~~~~~~i~~~S 226 (384)
T PRK06220 150 FQYRPEAIRACL-TPRTKAILINSPSNPTGHVLSPERLAGIASL-GIPIISDEIY-HGLVYEGREHSILEFTDNAFVLNG 226 (384)
T ss_pred CCCCHHHHHHHC-CCCCEEEEECCCCCCCCCCCCHHHHHHHHHH-CCEEEECCCH-HHHCCCCCCCCHHHCCCCEEEEEE
T ss_conf 677999999747-8887399972899987867719999998730-9889724626-864158998882114787899974
Q ss_pred CCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 45652--2567448983362056501664654322344556668999999997356489999999988899999986168
Q gi|254780349|r 234 THKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLG 311 (433)
Q Consensus 234 THKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G 311 (433)
.-|+| +|=|-|.++..+ ++.+++.+..-....+.+.+.+.|+. .++.+ ......+..+...+|.+.|.+.|.+.|
T Consensus 227 ~SK~~~~~G~RiG~~i~~~-~~i~~l~~~~~~~~~~~~~~~q~a~~-~al~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~ 303 (384)
T PRK06220 227 FSKLYAMTGWRLGYLIVPP-SCVRALQKLHQNFFICANSVVQEAGI-AALKQ-AQEDVARMRQIYNERRQYMIKRLREMG 303 (384)
T ss_pred CHHHCCCCCCCEEEEEECH-HHHHHHHHHHHHCCCCCCHHHHHHHH-HHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 2353078653569999889-99999999998615789879999999-99958-399999999999999999999999759
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCHHH-HHHHHHHCCEEEECCCCCCCCCCCCCC---CCCCCCCHHHHHCCCCHHHHHHH
Q ss_conf 52334588898126316655676799-999888567188037899899998889---85122466673079998999999
Q gi|254780349|r 312 FDIVSGGTDNHLMLVDLRSKRMTGKR-AESILGRVSITCNKNSIPFDPESPFIT---SGIRLGTPSGTTRGFKEKDFEYI 387 (433)
Q Consensus 312 ~~vv~ggTd~H~vlvdl~~~~~~G~~-a~~~Le~~gI~~Nkn~iP~D~~~~~~~---sGiRlGT~aiTtrG~~e~em~~i 387 (433)
+.+.....-+-.+|+|++..+.+..+ +.+.|+++||.+. ||. .|-+ .-+||.-.. .++.+++-
T Consensus 304 ~~~~~~P~g~~y~~~~~~~~~~d~~~~~~~ll~~~gV~v~----PG~---~Fg~~~~g~iRl~f~~------~~e~l~ea 370 (384)
T PRK06220 304 FGIRVEPTGAFYVLADARHLSGDSYALAFDILEEAGVGVT----PGI---DFGNGGEGYLRFSYAN------SLENIAEG 370 (384)
T ss_pred CCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCEEEE----CCH---HCCCCCCCEEEEEECC------CHHHHHHH
T ss_conf 9856389852688577887899999999999983999997----781---0088999979999709------99999999
Q ss_pred HHHHHHHH
Q ss_conf 99999996
Q gi|254780349|r 388 GELIAQIL 395 (433)
Q Consensus 388 A~li~~~L 395 (433)
.+-|.++|
T Consensus 371 ~~RL~~~l 378 (384)
T PRK06220 371 LDRLEQFL 378 (384)
T ss_pred HHHHHHHH
T ss_conf 99999999
No 41
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.77 E-value=1.5e-15 Score=128.85 Aligned_cols=329 Identities=14% Similarity=0.103 Sum_probs=218.7
Q ss_pred HHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC---EECCCHHHHHHH
Q ss_conf 98388810430102989999830510288657988875336006799999999999998718863---010000167999
Q gi|254780349|r 32 QNDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNF---VNVQSHSGSQMN 108 (433)
Q Consensus 32 q~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~---anvqp~SG~~An 108 (433)
|.+.|=|+|.=.-+++.|++++..++.++- .+ +.++-.-+.+..+++|+... +-+-+-||+.|+
T Consensus 3 ~~~~lL~~PGPt~v~~~V~~Am~~~~~~~~------------~e-F~~l~~~~~~~L~~l~~~~~~~~~v~~~gSGT~am 69 (368)
T PRK13479 3 ENDPLLLTPGPLTTSRTTREAMLRDWGSWD------------DD-FNAITASVRADLVAIATGEEGYTCVPLQGSGTFSV 69 (368)
T ss_pred CCCEEEECCCCCCCCHHHHHHHCCCCCCCC------------HH-HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH
T ss_conf 898057458999999999997475778987------------78-99999999999999957888707999716867999
Q ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC--EEEE--ECCCC
Q ss_conf 9999983154874881233448411147665433333220136658323565989999999860466--7897--05524
Q gi|254780349|r 109 QGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPK--LIIV--GGTAY 184 (433)
Q Consensus 109 ~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPk--lIi~--G~S~y 184 (433)
-+++..|++|||+|+.++ .|..+....-.+.....++..+.+++ ...+|++++++..++. |+ .|.+ .-++.
T Consensus 70 Eaai~nl~~~gdkvLv~~---~G~FG~R~~~ia~~~g~~v~~l~~~~-g~~~~~~~ve~~L~~~-~~~~~v~~vH~ETST 144 (368)
T PRK13479 70 EAAIGSLVPRDGKVLVPD---NGAYGARIAKIAEYLGIAHVVLDTGE-DEPPDAAAVEAALAAD-PRITHVALVHCETTT 144 (368)
T ss_pred HHHHHHCCCCCCEEEEEC---CCHHHHHHHHHHHHHCCCEEEEECCC-CCCCCHHHHHHHHHHC-CCCCEEEEEECCCCC
T ss_conf 999961547999799981---79279999999998199759987899-9988999999999749-996789998506772
Q ss_pred CCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCC---C-CCEEEECCCCCCCCCCC-EEEEECCCCHHHHCCH
Q ss_conf 35363799998864179789918620124432000123220---0-23567404565225674-4898336205650166
Q gi|254780349|r 185 SRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVP---H-CHIVTTTTHKSLRGPRG-GLIMTNHADLAKKINS 259 (433)
Q Consensus 185 ~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~---~-ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~i~~ 259 (433)
...-|++++.++|+++|+++++|+--..|= . |++ + .|++.++++|-|.+|.| ++++.+++. .++...
T Consensus 145 Gvln~l~~i~~~~~~~~~lliVDaVSs~G~-----~--~~~~d~wgiD~~~tgSQK~l~~pPGLs~v~~s~~a-~~~~~~ 216 (368)
T PRK13479 145 GILNPLDEIAAVVKRHGKRLIVDAMSSFGA-----I--PIDIAELGIDALISSANKCIEGVPGFGFVIARRSA-LEACKG 216 (368)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCCCC-----C--EECCCCCCEEEEEECCCCCCCCCCCCEEEEECHHH-HHHHHC
T ss_conf 031679999999985498699970200157-----2--11024453569995376514579971012208999-998742
Q ss_pred H---H-C------HHHH------HHHHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCC
Q ss_conf 4---6-5------4322------344556668999999997356-489999999988899999986168523345-8889
Q gi|254780349|r 260 A---I-F------PGLQ------GGPFMHSIAAKAVAFGEALSS-EFRDYAKQIVLNSQALAKKLQFLGFDIVSG-GTDN 321 (433)
Q Consensus 260 a---v-f------Pg~q------g~~~~~~iaa~aval~Ea~~~-~f~~Ya~qvv~NA~~La~~L~~~G~~vv~g-gTd~ 321 (433)
. . | ...+ -.|-.|.+.|+..+|.+..++ .....-++.-++++++.+.+.+.||+++.. ...+
T Consensus 217 ~~~~~yldl~~~~~~~~~~~~~~~Tp~v~li~aL~eaL~~i~~EGgl~~r~~r~~~~~~~~~~~~~~lGl~~~~~~~~~s 296 (368)
T PRK13479 217 NSRSLALDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLQLEEEGGVPARGARYARNCRTLVAGMRALGFEPLLDDEIQS 296 (368)
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC
T ss_conf 58876636899999986449988688289999999999999983188999999999999999999973876578945659
Q ss_pred CEE-EECCC-CCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 812-63166-55676799999888567188037899899998889851224666730799989999999999999602
Q gi|254780349|r 322 HLM-LVDLR-SKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 322 H~v-lvdl~-~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
..| -+.+. ..+++.++..+.|.+.|+++- ||... ...-+|||.=- -+.+.|+...-.-+.++|..
T Consensus 297 ~tvtav~~P~~~~~d~~~~~~~l~~~g~~i~----~G~~~---~~~~fRIGhMG----~~~~~di~~~l~ale~~L~~ 363 (368)
T PRK13479 297 PIIVTFHAPADPAYDFKEFYERLKEQGFVIY----PGKLT---QVDTFRIGCIG----AVDAADIRRLVAAIAEALYW 363 (368)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHCCCEEE----CCCCC---CCCEEEEECCC----CCCHHHHHHHHHHHHHHHHH
T ss_conf 8679997678856359999999997793896----88557---78979887799----99999999999999999998
No 42
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.77 E-value=5.7e-16 Score=131.69 Aligned_cols=316 Identities=14% Similarity=0.179 Sum_probs=211.2
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH-HHHHHHHHHH-
Q ss_conf 430102989999830510288657988875-3360067999999999999987188630100001679-9999999831-
Q gi|254780349|r 40 ASENIVSRAVLEAQGSILTNKYAEGYPSKR-YYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQ-MNQGVFLALM- 116 (433)
Q Consensus 40 ASEN~~S~~v~~~l~S~l~nkyaeG~pg~r-yy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~-An~av~~ALl- 116 (433)
|+...++|.|++++...+.+.| |-|+.. |..|.+-- ++-+-|++...++||++.-++=..||.. +|-.++.++.
T Consensus 5 aATtp~~~~v~~~~~~~~~~~~--~Np~s~~h~~g~~a~-~~le~aR~~ia~~lga~~~eiiFTsg~Tes~nl~i~g~~~ 81 (354)
T TIGR03235 5 NATTPVDPEVAEVMLPFLLEEF--GNPGSRTHEHGHNAK-KAVERARKQVAEALGAQTKEVIFTSGATESNNIAILGLAR 81 (354)
T ss_pred CCCCCCCHHHHHHHHHHHHHCC--CCCCHHHHHHHHHHH-HHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf 6789899999999999998668--797303128999999-9999999999998099967789968837999999999998
Q ss_pred ---CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC--CCCCCCCCHH
Q ss_conf ---54874881233448411147665433333220136658323565989999999860466789705--5243536379
Q gi|254780349|r 117 ---HPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGG--TAYSRVWDWE 191 (433)
Q Consensus 117 ---~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~--S~y~~~~d~~ 191 (433)
++||+|+...++|-.-+.--. .+.-..+++...++|. +|.||++++++.++ .+++||.+.. +...-..|++
T Consensus 82 ~~~~~g~~ii~s~~EH~svl~~~~--~l~~~G~~v~~~~vd~-~G~id~~~l~~~l~-~~t~lvsi~~~nnetG~i~pi~ 157 (354)
T TIGR03235 82 AHENKGKHIITTAIEHPAILEPAR--ALERNGFTVTYLEVDE-SGRVSVEELADAIR-DDTLLVSIMHVNNETGSLQPIR 157 (354)
T ss_pred HHHCCCCEEEECHHHHHHHHHHHH--HHHHCCCEEEEECCCC-CCCCCHHHHHHHHC-CCCEEEEEECCCCCCCCCCCHH
T ss_conf 502699999981003044799999--9996496899955578-98287799998726-8977999988756667638899
Q ss_pred HHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCC--CCCEEEECCCCCCCCCCC-EEEEECCCCHHH--HCC--------
Q ss_conf 9998864179789918620124432000123220--023567404565225674-489833620565--016--------
Q gi|254780349|r 192 RFRSIADSIGAYLMADISHISGLVVGGQHPSPVP--HCHIVTTTTHKSLRGPRG-GLIMTNHADLAK--KIN-------- 258 (433)
Q Consensus 192 ~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~--~ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~--~i~-------- 258 (433)
++.++|++.|+++++|++|..|-+ |=.+. .+|++++|-|| |.||+| |+++.|+. ... ++.
T Consensus 158 ~i~~~~~~~g~~~~vDa~Q~~g~~-----~id~~~~~~D~~s~S~HK-~~GP~GiG~L~vr~~-~~~~~~l~Pl~~GGgq 230 (354)
T TIGR03235 158 EIAELCEAREVFFHSDAAQVVGKI-----TVDLERDHIDLISLSGHK-AYGPKGIGALYIRKR-GKPKAPLAPIMFGGGQ 230 (354)
T ss_pred HHHHHHHCCCCEEEEECHHCCCCC-----CCCHHHHCCCEEEEECCC-CCCCCCEEEEEEECC-CCCCCCCCCEECCCCC
T ss_conf 998865225641562500115875-----557788499737631000-348871499998046-6766664640368988
Q ss_pred -HHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCC--CEEEECCCCCCC
Q ss_conf -6465432234455666899999999735648999999998889999998616--85233458889--812631665567
Q gi|254780349|r 259 -SAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL--GFDIVSGGTDN--HLMLVDLRSKRM 333 (433)
Q Consensus 259 -~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~--G~~vv~ggTd~--H~vlvdl~~~~~ 333 (433)
+..-| |.+...-|+|++.|+... ..++.+..+++-+-.+.|.+.|... |+.+.+...+. |.+- +.=.|+
T Consensus 231 e~g~r~---GT~nv~~i~g~~~A~~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~~v~i~g~~~~r~p~i~s--~~~~gi 304 (354)
T TIGR03235 231 ERGLRP---GTLPVPLIVGMGEAAEIA-RRNAQAWGVRLRAMCNLLRDALQTSLPGVKLNGDPAETLPNILS--FSFEGV 304 (354)
T ss_pred CCCCCC---CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEE--EEECCC
T ss_conf 687468---996599999999999999-98289999999999999999997459965965882247588899--997996
Q ss_pred CHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHH
Q ss_conf 679999988856718803789989999888985122466673079998999
Q gi|254780349|r 334 TGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDF 384 (433)
Q Consensus 334 ~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em 384 (433)
++......|+ .+|.|.- .+ -..||-.=-...+...|+.+++.
T Consensus 305 ~~~~l~~~L~-~~iavst-------GS-ACssg~~~pS~vL~amg~~~~~a 346 (354)
T TIGR03235 305 NPEALIRNLK-ADAAVST-------GS-ACTSSKYTPSHVLQAMGLDTDRA 346 (354)
T ss_pred CHHHHHHHHC-CCCEEEH-------HH-HCCCCCCCCCHHHHHCCCCHHHH
T ss_conf 9999999863-9989982-------24-20699899898898659997997
No 43
>PRK10534 L-threonine aldolase; Provisional
Probab=99.77 E-value=2e-15 Score=127.93 Aligned_cols=313 Identities=19% Similarity=0.185 Sum_probs=216.8
Q ss_pred CCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHC
Q ss_conf 43010--2989999830510288657988875336006799999999999998718863010000167999999998315
Q gi|254780349|r 40 ASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMH 117 (433)
Q Consensus 40 ASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~ 117 (433)
.|.|+ +||.+++++..-- -|.--|+.-..+.++| +++.+|||-+-+ +=..||++||+.++.++++
T Consensus 5 rSDtvt~p~~~m~~Am~~A~--------~GddvYgeDptv~~Le----~~~A~l~G~eaa-lFvpsGTmaN~iAl~~~~~ 71 (333)
T PRK10534 5 RSDTVTRPSRAMLEAMMAAP--------VGDDVYGDDPTVNALQ----DYAAELSGKEAA-LFLPTGTQANLVALLSHCE 71 (333)
T ss_pred CCCCCCCCCHHHHHHHHCCC--------CCCCCCCCCHHHHHHH----HHHHHHHCCCEE-EEECCCCHHHHHHHHHHCC
T ss_conf 54428999999999997375--------5775457698999999----999998589718-9957875789999998478
Q ss_pred CCCEEEECCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-----CCCEEEEECCCCCCCCC
Q ss_conf 487488123344841114---7665433333220136658323565989999999860-----46678970552435363
Q gi|254780349|r 118 PGDSFMGLSLDSGGHLTH---GSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEY-----NPKLIIVGGTAYSRVWD 189 (433)
Q Consensus 118 pGD~Il~~~l~~GGHlsh---g~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~-----kPklIi~G~S~y~~~~d 189 (433)
||+.|+.- +.+|+-. |....++|..... .+.+ .++.++.|.++..++.. +|++|.+-.+.....++
T Consensus 72 ~g~~vi~~---~~sHI~~~E~Gg~a~l~g~~~~~--i~~~-~~g~~~~~~v~~~i~~~~~h~~~~~lv~lenT~~G~v~p 145 (333)
T PRK10534 72 RGEEYIVG---QAAHNYLYEAGGAAVLGSIQPQP--IDAA-ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTHNGKVLP 145 (333)
T ss_pred CCCEEEEC---CCCCCHHCCCCCHHHHCCCCEEE--ECCC-CCCCCCHHHHHHHCCCCCCCCCCEEEEEEEECCCCEECC
T ss_conf 99869875---77761011466489876952155--1478-898248999998618788766762466554035885368
Q ss_pred ---HHHHHHHHHHCCCEEEECCCCHHHHH-HHHCCCCCCC-CCCEEEECCCCCCCCCCCEEEEECCCCHHHHCCHHHCHH
Q ss_conf ---79999886417978991862012443-2000123220-023567404565225674489833620565016646543
Q gi|254780349|r 190 ---WERFRSIADSIGAYLMADISHISGLV-VGGQHPSPVP-HCHIVTTTTHKSLRGPRGGLIMTNHADLAKKINSAIFPG 264 (433)
Q Consensus 190 ---~~~l~eIa~~~ga~l~~D~aH~~GLI-a~g~~~~Pl~-~ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~avfPg 264 (433)
+++++++|++.|..++.|+|...-=+ +.|+=+.-+- ++|.|+.+-.|.|.+|-|.+++..+ ++.+ ++-+..
T Consensus 146 ~~el~~i~~~a~~~gl~vHlDGARl~NA~~a~g~~~~e~~~~~Dsvs~clsKgLGap~Gsvl~g~~-~~i~---~a~~~R 221 (333)
T PRK10534 146 REYLKEAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNR-DYIK---RAIRWR 221 (333)
T ss_pred HHHHHHHHHHHHHCCCEEEECHHHHHHHHHHCCCCHHHHHHHCCEEEEEEECCCCCCCCEEEECCH-HHHH---HHHHHH
T ss_conf 999999999999759837623277764465429999999975898898740678873321464689-9999---999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHH
Q ss_conf 22344556668999999997356489999999988899999986168523345888981263166556767999998885
Q gi|254780349|r 265 LQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAESILGR 344 (433)
Q Consensus 265 ~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~ 344 (433)
-+-|-.|.+.-=+|.+...+++. ....-++-=+||+.|++.|.+.|+++.. .++.+|++++... ...+..+.|.+
T Consensus 222 K~~GGgmrQ~g~lAAa~l~aL~~-~~~rl~~dH~nA~~La~~L~~~g~~~~~--~eTN~vf~~~~~~--~~~~l~~~~~~ 296 (333)
T PRK10534 222 KMTGGGMRQAGILAAAGLYALKH-NVARLQEDHDNAAWLAQQLREAGADVMR--QDTNMLFVRVGEE--NAAALGEYMRE 296 (333)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCCCEEEEECCHH--HHHHHHHHHHH
T ss_conf 98546555899999999999963-9998999999899999999976987489--9764799977877--79999999998
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 6718803789989999888985122466673079998999999999999960
Q gi|254780349|r 345 VSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 345 ~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
-||.++- . +=+|+ +|.+...++|++.+-.-|.+.|.
T Consensus 297 ~gv~~~~-----~-------~~vR~----Vth~~it~~dv~~~i~~~r~~l~ 332 (333)
T PRK10534 297 RNVLINA-----S-------PIVRL----VTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred CCEEECC-----C-------CCEEE----EEECCCCHHHHHHHHHHHHHHHC
T ss_conf 7967579-----9-------81899----98089999999999999999971
No 44
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.77 E-value=6e-15 Score=124.60 Aligned_cols=333 Identities=17% Similarity=0.167 Sum_probs=230.4
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC--CEECCCHHHHHHHHHHH
Q ss_conf 8881043010298999983051028865798887533600679999999999999871886--30100001679999999
Q gi|254780349|r 35 EIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVN--FVNVQSHSGSQMNQGVF 112 (433)
Q Consensus 35 ~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~--~anvqp~SG~~An~av~ 112 (433)
.+=|+|.=-.++|.|++++...+.+-.+ -+|.+ +-.-+.+..+.+|+.+ .+-.=+-||+.|..+++
T Consensus 6 ~~Ll~PGP~~v~~~V~~am~~~~~~h~s-----------~~F~~-~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav 73 (383)
T COG0075 6 RLLLTPGPVPVPPRVLLAMARPMVGHRS-----------PDFVG-IMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAV 73 (383)
T ss_pred CEEEECCCCCCCHHHHHHHCCCCCCCCC-----------HHHHH-HHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHH
T ss_conf 5243379988899999974577777779-----------88999-99999999999966888747997688379999999
Q ss_pred HHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC-CEEE---EECCCCCCCC
Q ss_conf 98315487488123344841114766543333322013665832356598999999986046-6789---7055243536
Q gi|254780349|r 113 LALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNP-KLII---VGGTAYSRVW 188 (433)
Q Consensus 113 ~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kP-klIi---~G~S~y~~~~ 188 (433)
..+++|||+|+.+. .|-+++...-.+.....++..+...+ ...+|.+++++.+++..+ |+|. +..|.-.. .
T Consensus 74 ~sl~~pgdkVLv~~---nG~FG~R~~~ia~~~g~~v~~~~~~w-g~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvl-n 148 (383)
T COG0075 74 ASLVEPGDKVLVVV---NGKFGERFAEIAERYGAEVVVLEVEW-GEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVL-N 148 (383)
T ss_pred HHHCCCCCEEEEEE---CCHHHHHHHHHHHHHCCCEEEEECCC-CCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCC-C
T ss_conf 86058998699982---78077799999998299669984788-8879999999998528995089998115752013-7
Q ss_pred CHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCC-C-CCEEEECCCCCCCCCCC-EEEEECCCCHHHHCCHHHC---
Q ss_conf 3799998864179789918620124432000123220-0-23567404565225674-4898336205650166465---
Q gi|254780349|r 189 DWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVP-H-CHIVTTTTHKSLRGPRG-GLIMTNHADLAKKINSAIF--- 262 (433)
Q Consensus 189 d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~-~-ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~i~~avf--- 262 (433)
|++++.++|+++|+++++|+=-.+| ..+=+++ + .|++.+..+|-|.+|.| |++...+. -++++...--
T Consensus 149 pl~~I~~~~k~~g~l~iVDaVsS~G-----g~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~-a~~~~~~~~~~~~ 222 (383)
T COG0075 149 PLKEIAKAAKEHGALLIVDAVSSLG-----GEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSER-ALEAIEERKHPSF 222 (383)
T ss_pred CHHHHHHHHHHCCCEEEEEECCCCC-----CCCCCHHHCCCCEEEECCCHHCCCCCCCCEEEECHH-HHHHHHCCCCCCE
T ss_conf 6999999999729889998234578-----812544442845899767201158986143677799-9999855888760
Q ss_pred --------------HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCEEEEC
Q ss_conf --------------43223445566689999999973564899999999888999999861685233458-889812631
Q gi|254780349|r 263 --------------PGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGG-TDNHLMLVD 327 (433)
Q Consensus 263 --------------Pg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~gg-Td~H~vlvd 327 (433)
..+-..|-.|.+.|+..+|.+.+.+.+....++--.+++++-+.+.+.||+++... -.+-.|..=
T Consensus 223 ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~ 302 (383)
T COG0075 223 YLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFADPERRSPTVTAI 302 (383)
T ss_pred EECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
T ss_conf 22199999988536898889877899999999999998657999999999999999999976984236865578854899
Q ss_pred CCCCCCCHHHHH-HHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 665567679999-9888567188037899899998889851224666730799989999999999999602577
Q gi|254780349|r 328 LRSKRMTGKRAE-SILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDGSSS 400 (433)
Q Consensus 328 l~~~~~~G~~a~-~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~~~~ 400 (433)
..+.++++.++. ..+++.||.+-.-. .+...-=+|||.=- .+...++.....-|.++|.....
T Consensus 303 ~~P~g~~~~~~~~~~~~~~g~~i~gg~------~~l~gkifRIGhMG----~~~~~dv~~~l~ale~~L~~~g~ 366 (383)
T COG0075 303 KVPEGVDDKKVRRALLKEYGVEIAGGQ------GPLKGKIFRIGHMG----NVRPEDVLAALAALEAALRELGV 366 (383)
T ss_pred ECCCCCCCHHHHHHHHHHCCEEECCCC------CCCCCCEEEEECCC----CCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 789887729999999984799964565------45576189983575----67889999999999999997497
No 45
>pfam01212 Beta_elim_lyase Beta-eliminating lyase.
Probab=99.76 E-value=5e-16 Score=132.08 Aligned_cols=264 Identities=23% Similarity=0.232 Sum_probs=182.8
Q ss_pred CCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHC
Q ss_conf 43010--2989999830510288657988875336006799999999999998718863010000167999999998315
Q gi|254780349|r 40 ASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMH 117 (433)
Q Consensus 40 ASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~ 117 (433)
.|.|+ ++|.+++++.....+ .--|++-..+.++| +++.+|||.+.+ +=.+||+.||..++.++++
T Consensus 3 ~SDt~t~~t~~m~~a~~~a~~G--------dd~Yg~D~t~~~le----~~~a~l~G~eaa-lfv~sGT~AN~ial~~~~~ 69 (288)
T pfam01212 3 RSDTVTGPTPAMREAMAAAMVG--------DEVYGGDPTVNRLE----DRVAELFGKEAA-LFVPSGTMANQLALMAHCR 69 (288)
T ss_pred CCCCCCCCCHHHHHHHHHCCCC--------CCCCCCCHHHHHHH----HHHHHHHCCCEE-EECCCCHHHHHHHHHHHCC
T ss_conf 6430888999999999823357--------73226798999999----999998699829-9868867999999998388
Q ss_pred CCCEEEECCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH------HCCCEEEEECCC-----
Q ss_conf 487488123344841114---766543333322013665832356598999999986------046678970552-----
Q gi|254780349|r 118 PGDSFMGLSLDSGGHLTH---GSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIE------YNPKLIIVGGTA----- 183 (433)
Q Consensus 118 pGD~Il~~~l~~GGHlsh---g~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~------~kPklIi~G~S~----- 183 (433)
|||.|+.-+. +|+-. |....++|.....+ +.+ ..+.+|.+++++.++. .+|++|.+-.+.
T Consensus 70 ~g~~vi~~~~---sHi~~~E~ga~~~~~G~~~~~l--~~~-~~G~~~~~~l~~~i~~~~~~h~~~~~~v~le~t~n~~gG 143 (288)
T pfam01212 70 RGDEVICGEP---AHIYFDETGGHAELGGAQPVPL--PGA-EAGKLDLEDLEAAIRPVGDIHFPPTGLISLENTHNSAGG 143 (288)
T ss_pred CCCEEEEECC---CCCEEECCCHHHHHCCCEEEEC--CCC-CCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCC
T ss_conf 9988998357---6765456777999829825844--787-789829999999876449854676547999955448896
Q ss_pred --CCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCCCC-CCCCEEEECCCCCCCCCCCEEEEECCCCHHHHCCH
Q ss_conf --4353637999988641797899186201244-3200012322-00235674045652256744898336205650166
Q gi|254780349|r 184 --YSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPSPV-PHCHIVTTTTHKSLRGPRGGLIMTNHADLAKKINS 259 (433)
Q Consensus 184 --y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~Pl-~~ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~ 259 (433)
|+ .-++++++++|++.|..++.|+|-+.-- ++-|+-+..+ .++|.|+.+-.|.+.+|-|++|+.++ ++.+ +
T Consensus 144 ~~~~-~~el~~i~~~a~~~gl~lHmDGARl~nA~~a~~~~~~e~~~~~D~v~~~~sK~lga~~Gavl~g~~-~~i~---~ 218 (288)
T pfam01212 144 QVVS-LEELREIRAIAREHGIPLHLDGARLANAAVALGVIVKEITSYADSVSMSLSKGLGAPVGSVLAGSD-DFIA---Y 218 (288)
T ss_pred EECC-HHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEECCCCCCEEEEEEECH-HHHH---H
T ss_conf 6557-899999999999809937630878988887609998898546888999843578861003898289-9999---9
Q ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCEEEECC
Q ss_conf 465432234455666899999999735648999999998889999998616852334-588898126316
Q gi|254780349|r 260 AIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVS-GGTDNHLMLVDL 328 (433)
Q Consensus 260 avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~-ggTd~H~vlvdl 328 (433)
+....-+-|-.|.+.--++.+..-+++. ......+--+||+.|++.|...+.-++. -.|++|++.++-
T Consensus 219 a~~~rk~lGg~mrq~g~~aaa~~~aL~~-~~~~l~~dh~~A~~La~~l~~~~~~~~~~~~t~~~~v~v~~ 287 (288)
T pfam01212 219 AIRQRKYLGGGMRQAGVLAAAGLRALEE-GVARLGRDHATARRLAEGLELLRGVIPRRVYTNTHMVFVAE 287 (288)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECC
T ss_conf 9999999726425667999999999980-89888888999999999997689932267878605999637
No 46
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.75 E-value=1.5e-15 Score=128.76 Aligned_cols=321 Identities=21% Similarity=0.264 Sum_probs=213.4
Q ss_pred CCCCCCC----CHHHHHHHHCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHH
Q ss_conf 0430102----989999830510288657988875336006-79999999999999871886301000016799999999
Q gi|254780349|r 39 IASENIV----SRAVLEAQGSILTNKYAEGYPSKRYYGGCQ-YVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFL 113 (433)
Q Consensus 39 iASEN~~----S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~-~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ 113 (433)
.+|.||. +|.+.++....+ .+|.-|-+|-|-..|+. ...++| ++..++||.+-|-+ ..||..||++++.
T Consensus 44 f~SNdYLGLa~~~~~~~a~~~~~-~~~g~g~~gsR~i~G~~~~h~~LE----~~lA~f~g~e~al~-f~SGy~AN~~~i~ 117 (388)
T COG0156 44 FCSNDYLGLASHPELIEAAKAAI-RRYGVGAGGSRLISGTSDLHVELE----EELADFLGAEAALL-FSSGFVANLGLLS 117 (388)
T ss_pred EECCCCCCCCCCHHHHHHHHHHH-HHHCCCCCCCCCCCCCCHHHHHHH----HHHHHHHCCCCEEE-ECCCCHHHHHHHH
T ss_conf 44377435268878999999999-981999897670447828999999----99999849984899-7153111777888
Q ss_pred HHHCCCCEEEECCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-----CCCEEEEECCCCC
Q ss_conf 83154874881233448411147665---433333220136658323565989999999860-----4667897055243
Q gi|254780349|r 114 ALMHPGDSFMGLSLDSGGHLTHGSSV---NMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEY-----NPKLIIVGGTAYS 185 (433)
Q Consensus 114 ALl~pGD~Il~~~l~~GGHlshg~~~---~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~-----kPklIi~G~S~y~ 185 (433)
+|++++|-|++=.+. |.+.. ..++ -+.+.|. .-|++.+|+++++. ++++|++. |+|+
T Consensus 118 ~l~~~~dli~~D~ln------HASiidG~rls~--a~~~~f~------HnD~~~Le~~l~~~~~~~~~~~~Ivte-gVfS 182 (388)
T COG0156 118 ALLKKGDLIFSDELN------HASIIDGIRLSR--AEVRRFK------HNDLDHLEALLEEARENGARRKLIVTE-GVFS 182 (388)
T ss_pred HHCCCCCEEEEECHH------HHHHHHHHHHCC--CCEEEEC------CCCHHHHHHHHHHHHCCCCCCEEEEEE-CCCC
T ss_conf 856888689980102------053998898578--8389826------899999999987622247875499982-3421
Q ss_pred CC---CCHHHHHHHHHHCCCEEEECCCCHHHHHH---HHCC--CCCC-CCCCEEEECCCCCCCCCCCEEEEECCCCHHHH
Q ss_conf 53---63799998864179789918620124432---0001--2322-00235674045652256744898336205650
Q gi|254780349|r 186 RV---WDWERFRSIADSIGAYLMADISHISGLVV---GGQH--PSPV-PHCHIVTTTTHKSLRGPRGGLIMTNHADLAKK 256 (433)
Q Consensus 186 ~~---~d~~~l~eIa~~~ga~l~~D~aH~~GLIa---~g~~--~~Pl-~~ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~ 256 (433)
.. .|++++.++++++||+|++|-||-.|.+- .|.. ..-. ..-||+++|--|.|. --||.|.+.. ++.+-
T Consensus 183 MdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlG-s~Gg~v~g~~-~~~d~ 260 (388)
T COG0156 183 MDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALG-SSGGYIAGSA-ALIDY 260 (388)
T ss_pred CCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECHHHHC-CCCCEEECCH-HHHHH
T ss_conf 899857789999999983958999852010243799861788738887651499987505432-2684465759-99999
Q ss_pred CCHHHCHHHHHHHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCH
Q ss_conf 1664654322344556668-999999997356489999999988899999986168523345888981263166556767
Q gi|254780349|r 257 INSAIFPGLQGGPFMHSIA-AKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTG 335 (433)
Q Consensus 257 i~~avfPg~qg~~~~~~ia-a~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G 335 (433)
+-+.--|..-+.-.+-.++ +...++ +.+. ++.+--++.-+|++.+...+...||.+ ..++++.+-+-+.+....
T Consensus 261 L~~~ar~~ifStalpP~~aaa~~~al-~~l~-~~~~~r~~L~~~~~~~~~~~~~~~~~~--~~s~s~I~pv~~gd~~~a- 335 (388)
T COG0156 261 LRNRARPFIFSTALPPAVAAAALAAL-RILE-EGPERRERLQELAAFFRSLLKALGLVL--LPSESPIIPVILGDEERA- 335 (388)
T ss_pred HHHHCCCEECCCCCCHHHHHHHHHHH-HHHH-HCHHHHHHHHHHHHHHHHHHHHCCCCC--CCCCCCEEEEEECCHHHH-
T ss_conf 99718652214778978899999999-9987-587889999999999998888529765--788898661696888999-
Q ss_pred HHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 99999888567188037899899998889851224666730799989999999999999
Q gi|254780349|r 336 KRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQI 394 (433)
Q Consensus 336 ~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~ 394 (433)
.++...|.+.||.+.--.-|- -|-.++.||+--.+ .+.++|++.+++.+.++
T Consensus 336 ~~~s~~l~~~Gi~v~~i~~PT---Vp~gtarlRi~lta----~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 336 LEASRALLEEGIYVSAIRPPT---VPKGTARLRITLTA----AHTEEDIDRLAEALSEV 387 (388)
T ss_pred HHHHHHHHHCCEEEEEECCCC---CCCCCCEEEEEECC----CCCHHHHHHHHHHHHHH
T ss_conf 999999997792571236899---89996508987167----79999999999999852
No 47
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.75 E-value=1.3e-16 Score=136.22 Aligned_cols=223 Identities=19% Similarity=0.175 Sum_probs=167.9
Q ss_pred HHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CC
Q ss_conf 999999987188630100001679999999983154874881233448411147665433333220136658323---56
Q gi|254780349|r 83 IAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED---GL 159 (433)
Q Consensus 83 la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~---~~ 159 (433)
-+.+++.++||++++-.=...-|.+|+++++++++|||+|+.. ..-|-|-=....++|..-..+.-.+|++. +-
T Consensus 63 eAq~laA~~~ga~~s~flvnGsT~g~~a~i~a~~~~gd~vlv~---RN~HkSv~~gl~l~g~~Pvyl~p~~~~~~gi~~~ 139 (294)
T cd00615 63 EAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCGPGDKILID---RNCHKSVINGLVLSGAVPVYLKPERNPYYGIAGG 139 (294)
T ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEE---CCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC
T ss_conf 9999999983999669982772699999999832899989982---6518999999998698489960643555695389
Q ss_pred CCHHHHHHHHHHH-CCCEEEE-ECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCC-CCCCC-CCEEEECCC
Q ss_conf 5989999999860-4667897-055243536379999886417978991862012443200012-32200-235674045
Q gi|254780349|r 160 LDMHEIESLAIEY-NPKLIIV-GGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHP-SPVPH-CHIVTTTTH 235 (433)
Q Consensus 160 ID~d~~~~~a~~~-kPklIi~-G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~-~Pl~~-ADvvt~sTH 235 (433)
|+.+.+++.++++ .+|.+++ ..+.|....|++++.++|++.|..|++|.||-+=+--...+| +.+.. ||+++.|||
T Consensus 140 i~~~~~~~al~~~p~~kav~lt~PtY~G~~~Dl~~i~~~~h~~~~~llVDEAhGah~~F~~~lp~~a~~~GAD~vv~S~H 219 (294)
T cd00615 140 IPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGADIVVQSTH 219 (294)
T ss_pred CCHHHHHHHHHHCCCCCEEEEECCCCCEEEECHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCCCHHHCCCEEEEECHH
T ss_conf 99999999998589965899977998877668999999984049979997754034431877875566669639996232
Q ss_pred CCCCCC-CCEEEEECCC-CHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 652256-7448983362-0565016646543223445566689999999973564899999999888999999861
Q gi|254780349|r 236 KSLRGP-RGGLIMTNHA-DLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQF 309 (433)
Q Consensus 236 Ktl~GP-rgGiI~~~~~-e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~ 309 (433)
|||++- |+.+|..++. ...++++.+..--..++|----+|++=.|-..+ ..++++.-+++++-|+.+-+.+.+
T Consensus 220 KtL~altQ~s~lh~~~~~v~~~~l~~~l~~~qTTSPSYllmASlD~ar~~~-~~~G~~l~~~~l~~a~~~R~~i~~ 294 (294)
T cd00615 220 KTLPALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMM-ALEGKELVEELIELALYARQEINK 294 (294)
T ss_pred HCCCCCCHHHHEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 145332225320237996899999999998838875899999999999999-999999999999999999999659
No 48
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.75 E-value=3.3e-15 Score=126.41 Aligned_cols=326 Identities=17% Similarity=0.167 Sum_probs=199.2
Q ss_pred CCCCCC----CHHHHHHHHCCCCCCC-------CCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHH
Q ss_conf 430102----9899998305102886-------5798887533600-679999999999999871886301000016799
Q gi|254780349|r 40 ASENIV----SRAVLEAQGSILTNKY-------AEGYPSKRYYGGC-QYVDDIENIAIERAKKLFNVNFVNVQSHSGSQM 107 (433)
Q Consensus 40 ASEN~~----S~~v~~~l~S~l~nky-------aeG~pg~ryy~G~-~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~A 107 (433)
+|.||+ +|.+.++... -..+| .-|.-|.|-..|+ +..+++|+ +..+++|.+-|-+=+ ||..|
T Consensus 10 sSNDYLGLs~~p~v~~a~~~-a~~~y~~~~~~~g~Gs~gSrl~~G~~~~h~~LE~----~lA~f~g~e~allf~-sGy~A 83 (370)
T PRK05937 10 VTNDFLGFSRSTTLVHEVEK-RYRLYCEQFPHAQLGYGGSRAILGPSSLLDDLEH----KIAHFHGAPEAFIVP-SGYMA 83 (370)
T ss_pred CCCCCCCCCCCHHHHHHHHH-HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH----HHHHHHCCCCEEEEC-CHHHH
T ss_conf 03200387899899999999-9998731257898768687826278699999999----999986999399987-66889
Q ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC----C-EEEEECC
Q ss_conf 9999998315487488123344841114766543333322013665832356598999999986046----6-7897055
Q gi|254780349|r 108 NQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNP----K-LIIVGGT 182 (433)
Q Consensus 108 n~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kP----k-lIi~G~S 182 (433)
|.+++.+|.+++|.|+.=. --|.|--.-...++. +...|.- -|++.++++.++.++ + +|+.. +
T Consensus 84 N~~~i~al~~~~d~i~~D~---l~HaSi~dG~rls~a--~~~~f~H------nd~~~Le~~L~~~~~~~~~~~~iv~e-g 151 (370)
T PRK05937 84 NLGLCAHLSSVTDYVLWDE---QVHISVVYSLSVISG--KHQSFRH------NDLDHLESLLESCRAVSFGRIFIFVC-S 151 (370)
T ss_pred HHHHHHHCCCCCCEEEEEC---CCHHHHHHHHHHCCC--CEEEECC------CCHHHHHHHHHHHHHCCCCCEEEEEE-C
T ss_conf 9999996089999899963---061999999986499--8699689------99899999998533117885599994-0
Q ss_pred CCCCC---CCHHHHHHHHHHCCCEEEECCCCHHHHHH---HHCC-CCCCCCCCEEEECCCCCCCCCCCEEEEECCCCHHH
Q ss_conf 24353---63799998864179789918620124432---0001-23220023567404565225674489833620565
Q gi|254780349|r 183 AYSRV---WDWERFRSIADSIGAYLMADISHISGLVV---GGQH-PSPVPHCHIVTTTTHKSLRGPRGGLIMTNHADLAK 255 (433)
Q Consensus 183 ~y~~~---~d~~~l~eIa~~~ga~l~~D~aH~~GLIa---~g~~-~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~e~~~ 255 (433)
+|+.. .|++++.++|++++++|++|-||-.|.+- .|.. .-.++..|++++|.-|.|. -.||.|.+.+ ++.+
T Consensus 152 VfSMdGdiapL~~l~~l~~~y~a~l~vDeAH~~Gv~G~~GrG~~e~~g~~~~~~i~~TlsKAlG-s~Ggfv~~s~-~~i~ 229 (370)
T PRK05937 152 VYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALG-SMGAALLSSS-EVKQ 229 (370)
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHCCCCCCCCCCHHHHCCCCCCCEEEEEHHHHHH-HCCEEEECCH-HHHH
T ss_conf 5667787558999999999819789973300004337999757887399887789813256621-0653898288-9999
Q ss_pred HCCHHHCHHHHHHHH-HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCC
Q ss_conf 016646543223445-5666899999999735648999999998889999998616852334588898126316655676
Q gi|254780349|r 256 KINSAIFPGLQGGPF-MHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMT 334 (433)
Q Consensus 256 ~i~~avfPg~qg~~~-~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~ 334 (433)
.+-..--|..-+... +..+|+...++.. +..+.....++...|.+.+.+.+. . .+.++.+-|-+.+ ..
T Consensus 230 ~l~~~ar~~IfStalpP~~~aa~~~al~~-l~~e~~~~r~~l~~~~~~~~~~~~---~-----~~~~~i~pI~~~~--~~ 298 (370)
T PRK05937 230 DLMLNSPPLRYSTGLPPHALISIQVAYDF-LSQEGELARKQLFRLKEYFAQKFS---S-----AAPGCVQPIFLPD--IS 298 (370)
T ss_pred HHHHHCCCCCCCCCCCHHHHHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHCC---C-----CCCCCEEEEEECC--HH
T ss_conf 99983964003675589999999999999-985959999999999999998506---6-----7899748898083--89
Q ss_pred HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 7999998885671880378998999988898512246667307999899999999999996025776211799
Q gi|254780349|r 335 GKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDGSSSDEENHSL 407 (433)
Q Consensus 335 G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~~~~~~~~~~~ 407 (433)
-..+.+.|.+.||.|+--. +|.+|- |||...+ .-.++|++.+.+.+.++++..+..-.+.+.
T Consensus 299 ~~~~~~~L~~~Gi~v~~Ir------~PtVPr-LRi~l~A----~HT~edId~Lv~~L~~~~~~~~k~~~~~~~ 360 (370)
T PRK05937 299 EQELYSKLVETGIRVGVVC------FPTKPF-LRVNLHA----FNTEDEVDILVSVLHSYLEKCQKNVVIGHE 360 (370)
T ss_pred HHHHHHHHHHCCEEEEEEC------CCCCCE-EEEECCC----CCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 9999999997897798689------899883-7886186----669999999999999999998614646626
No 49
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.75 E-value=9e-16 Score=130.30 Aligned_cols=327 Identities=18% Similarity=0.184 Sum_probs=210.2
Q ss_pred HHHHHCHHHHHH-HHHHHH-HHHHCCCCCCCCCC-CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 697858999999-999999-99838881043010-298999983051028865798887533600679999999999999
Q gi|254780349|r 13 SLIESDPDVFSL-IGQESC-RQNDEIQLIASENI-VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAK 89 (433)
Q Consensus 13 ~l~~~Dpei~~~-i~~e~~-rq~~~l~LiASEN~-~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~ 89 (433)
+.+...+++... +..+.. ++....++.-+-+. +.+.+.+++.+.+. +- .|.|+. |.+ .-++|+-++.-+.
T Consensus 39 p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~~~~~-~n-l~d~~~--~p~---a~~~E~~~v~~l~ 111 (460)
T COG0076 39 PLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLVSALN-KN-LGDPDE--SPA---AAELEERVVNMLS 111 (460)
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHH-CC-CCCCCC--CCC---HHHHHHHHHHHHH
T ss_conf 7467899999986366554477865567635788867999999999873-47-998123--831---5888999999999
Q ss_pred HHCCC-CC-EECCCHHHHHHHHHHHHHHHCCC--------C------EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87188-63-01000016799999999831548--------7------488123344841114766543333322013665
Q gi|254780349|r 90 KLFNV-NF-VNVQSHSGSQMNQGVFLALMHPG--------D------SFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNV 153 (433)
Q Consensus 90 ~lF~a-~~-anvqp~SG~~An~av~~ALl~pG--------D------~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~ 153 (433)
+||++ +- .-+=-..||.||+..+++.-.-. . .|+ .+...|.|.-+...+.|...+.++.
T Consensus 112 ~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii---~s~~aH~s~~Kaa~~lG~~~~~v~~-- 186 (460)
T COG0076 112 DLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIV---CSETAHFSFEKAARYLGLGLRRVPT-- 186 (460)
T ss_pred HHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE---ECCCCCEEHHHHHHHHCCCCEEEEE--
T ss_conf 99579976606796170799999999999998766442023446887499---4574312099999981885237875--
Q ss_pred CCCCCCCCHHHHHHHHHHHCCC--EE-EEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHH-HHCCC----CCCC
Q ss_conf 8323565989999999860466--78-970552435363799998864179789918620124432-00012----3220
Q gi|254780349|r 154 RKEDGLLDMHEIESLAIEYNPK--LI-IVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVV-GGQHP----SPVP 225 (433)
Q Consensus 154 d~~~~~ID~d~~~~~a~~~kPk--lI-i~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa-~g~~~----~Pl~ 225 (433)
++.++.||.+++++.+.+..-. +| ++|...+...-|++++++||++++.++++|+| +.|.++ --.+. .=++
T Consensus 187 ~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA-~GG~~~pf~~~~~~~~f~l~ 265 (460)
T COG0076 187 VPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAA-FGGFLLPFLEPDGRWDFGLE 265 (460)
T ss_pred ECCCEEECHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECC-CCCHHHHCCCCCCHHHCCCC
T ss_conf 24750568999999998746476499972688887778899999999976997898734-40021102474225351788
Q ss_pred CCCEEEECCCCCCCCCCC-EEEEECCCCHHHHCCHHHCHHHHH---------HHHHH-HHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 023567404565225674-489833620565016646543223---------44556-6689999999973564899999
Q gi|254780349|r 226 HCHIVTTTTHKSLRGPRG-GLIMTNHADLAKKINSAIFPGLQG---------GPFMH-SIAAKAVAFGEALSSEFRDYAK 294 (433)
Q Consensus 226 ~ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~i~~avfPg~qg---------~~~~~-~iaa~aval~Ea~~~~f~~Ya~ 294 (433)
.+|.||.+.||-+.-|-| |+|++||++...++..-.-|.+.+ +..+. .+++.-..|+..-.+.|++-.+
T Consensus 266 ~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~ 345 (460)
T COG0076 266 GVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLD 345 (460)
T ss_pred CCEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 82089988642778888706999968898467761236677877866636885054189999999999967888999999
Q ss_pred HHHHHHHHHHHHHHHCC-CCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCC
Q ss_conf 99988899999986168-523345888981263166556767999998885671880378
Q gi|254780349|r 295 QIVLNSQALAKKLQFLG-FDIVSGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNS 353 (433)
Q Consensus 295 qvv~NA~~La~~L~~~G-~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~ 353 (433)
+++++|+.|++.|.+.| |+++... .--.|...+.+..-...+....+.+.|-.+....
T Consensus 346 ~~~~~a~~la~~l~~~~~~e~~~~p-~l~~V~fr~~~~~~~~~~~~~~~~~~gw~v~~~~ 404 (460)
T COG0076 346 RTLELARYLAEELEKLGDFELVNEP-ELPIVAFRLKDDEDTLADLSERLDRRGWQVPAQL 404 (460)
T ss_pred HHHHHHHHHHHHHHHCCCCEEECCC-CCEEEEEECCCCCCCHHHHHHHHHHCCCEEECCC
T ss_conf 9999999999998647882763388-6507999657643202314789986297552013
No 50
>PRK08912 hypothetical protein; Provisional
Probab=99.75 E-value=5.3e-15 Score=124.93 Aligned_cols=354 Identities=16% Similarity=0.215 Sum_probs=224.3
Q ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 7646978589999999999999983888104301--02989999830510288657988875336006799999999999
Q gi|254780349|r 10 FQQSLIESDPDVFSLIGQESCRQNDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIER 87 (433)
Q Consensus 10 ~~~~l~~~Dpei~~~i~~e~~rq~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~ 87 (433)
+|..|....+-+++.+.+ ..++.+.|+|=..|= .+++.++++....+..-+. .|+-..-..++-+-..+.
T Consensus 4 ~n~~~~~~~~~~~~~~~~-la~~~~~I~L~~G~Pd~~~p~~i~~a~~~a~~~~~~-------~Y~~~~G~~~LR~aia~~ 75 (387)
T PRK08912 4 LNPVFADLPTTIFEVMSQ-LAREHGAINLGQGFPDDPGPEDVRRAAADALLDGYN-------QYPPMMGLPELRQAVAAH 75 (387)
T ss_pred CCCCHHHCCCCHHHHHHH-HHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCC-------CCCCCCCHHHHHHHHHHH
T ss_conf 561354479989999999-863799277369789999889999999999852999-------898998729999999999
Q ss_pred HHHHCCCCC--E-ECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 998718863--0-100001679-999999983154874881233448411147665433333220136658323565989
Q gi|254780349|r 88 AKKLFNVNF--V-NVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMH 163 (433)
Q Consensus 88 a~~lF~a~~--a-nvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d 163 (433)
.++.+|.+. . +|-..+|++ |...++.+|++|||.|+..+...-++.. . +...+...+.+++++++..+|.+
T Consensus 76 ~~~~~g~~~~p~~~V~vt~Ga~~al~~~~~al~~pGD~Vlv~~P~y~~y~~---~--~~~~G~~~~~v~~~~~~~~~d~~ 150 (387)
T PRK08912 76 YARFHGLDLDPMTEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDSYLP---I--IRRAGGVPRLVRLEPPHWRLPEA 150 (387)
T ss_pred HHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH---H--HHHCCCEEEECCCCCCCCCCCHH
T ss_conf 999868998988729987668999999999966998989994880811799---9--99729889975655877788999
Q ss_pred HHHHHHHHHCCCEEEEECCCCC--CC---CCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCC-CC---C--EEEE
Q ss_conf 9999998604667897055243--53---63799998864179789918620124432000123220-02---3--5674
Q gi|254780349|r 164 EIESLAIEYNPKLIIVGGTAYS--RV---WDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVP-HC---H--IVTT 232 (433)
Q Consensus 164 ~~~~~a~~~kPklIi~G~S~y~--~~---~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~-~A---D--vvt~ 232 (433)
++++.+ ..|+|+|++-....| .. -.++++.++|.+.|.+++.|..+ ..|+-.|.-+.|+- .. | |+.+
T Consensus 151 ~l~~~~-~~~tk~iil~~P~NPTG~v~s~e~l~~l~~~a~~~~i~vi~DEiY-~~l~~~~~~~~~~~~~~~~~~~~i~i~ 228 (387)
T PRK08912 151 ALAAAF-SPRTKAVLLNNPLNPAGKVFPREDLALLAEFCQRHDAVAICDEVW-EHVVFDGRRHIPLMALPGMRERTVKIG 228 (387)
T ss_pred HHHHCC-CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCH-HHEEECCCCCCHHHCCCCCCCCEEEEC
T ss_conf 998527-888669998999898885686999999999886579799802652-331567865404440667667369985
Q ss_pred CCCCCC--CCCCCEEEEECCCCHHHHCCHHH-CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 045652--25674489833620565016646-543223445566689999999973564899999999888999999861
Q gi|254780349|r 233 TTHKSL--RGPRGGLIMTNHADLAKKINSAI-FPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQF 309 (433)
Q Consensus 233 sTHKtl--~GPrgGiI~~~~~e~~~~i~~av-fPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~ 309 (433)
|.-|+| +|=|-|.+..++ ++.+++.+.- +-.....+.+.. +.+.++.+ ....+.+..++.-++...|.+.|.+
T Consensus 229 S~SK~~~m~G~RiG~~~~~~-~li~~l~~~~~~~~~~~~~~~Q~--a~a~~l~~-~~~~~~~~~~~~~~rr~~l~~~L~~ 304 (387)
T PRK08912 229 SAGKIFSLTGWKVGFVCAAP-PLLRVLAKAHQFLTFTTPPNLQR--AVAYGLGK-PDDYFEGMRADLARSRDRLAAGLRR 304 (387)
T ss_pred CCCCEECCCCCCEEEEEECH-HHHHHHHHHHHHCCCCCCHHHHH--HHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 67775205533279998399-99999999987585576699999--99999738-7799999999999999999999997
Q ss_pred CCCCCCC-CCCCCCEEEECCCCCCCCH--HH-HHHHHHHCCEEEECCCCCCCCCCCCCC-----CCCCCCCHHHHHCCCC
Q ss_conf 6852334-5888981263166556767--99-999888567188037899899998889-----8512246667307999
Q gi|254780349|r 310 LGFDIVS-GGTDNHLMLVDLRSKRMTG--KR-AESILGRVSITCNKNSIPFDPESPFIT-----SGIRLGTPSGTTRGFK 380 (433)
Q Consensus 310 ~G~~vv~-ggTd~H~vlvdl~~~~~~G--~~-a~~~Le~~gI~~Nkn~iP~D~~~~~~~-----sGiRlGT~aiTtrG~~ 380 (433)
.|+.++. +|+- .+|+|+++.+.+. .+ +.+.|++.|+.+- ||. .|.+ .-|||.-. -.
T Consensus 305 ~g~~~~~~~G~~--~~~~~~~~~~~~~~~~~f~~~ll~e~gV~~v----PG~---~F~~~~~~~~~iRlsfa------~~ 369 (387)
T PRK08912 305 IGFPVLPSQGTY--FLTVDLAPLGLAEDDVAFCRRLVEEAGVAAI----PVS---AFYEEDPVTSVVRFCFA------KR 369 (387)
T ss_pred CCCEEECCCCEE--EEEEECCCCCCCCCHHHHHHHHHHHCCEEEE----CCC---CCCCCCCCCCEEEEEEC------CC
T ss_conf 698562798158--9988514558998999999999996899998----150---12899999985999979------99
Q ss_pred HHHHHHHHHHHHHHHHC
Q ss_conf 89999999999999602
Q gi|254780349|r 381 EKDFEYIGELIAQILDG 397 (433)
Q Consensus 381 e~em~~iA~li~~~L~~ 397 (433)
++++++-.+-|.++|++
T Consensus 370 ~e~l~ea~~RL~~~lk~ 386 (387)
T PRK08912 370 DATLDEAVERLAAAFRG 386 (387)
T ss_pred HHHHHHHHHHHHHHHHC
T ss_conf 99999999999999836
No 51
>PRK08443 consensus
Probab=99.74 E-value=4.5e-15 Score=125.46 Aligned_cols=360 Identities=13% Similarity=0.132 Sum_probs=214.8
Q ss_pred HHHHHHHHHCHHHHHHHHH----HHHHHHHCCCCCCCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 7764697858999999999----99999838881043010--29899998305102886579888753360067999999
Q gi|254780349|r 9 FFQQSLIESDPDVFSLIGQ----ESCRQNDEIQLIASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIEN 82 (433)
Q Consensus 9 ~~~~~l~~~Dpei~~~i~~----e~~rq~~~l~LiASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~ 82 (433)
|+.+.++...+.++.-|.+ -...-++.|+|--.|.- +++.+++++...+.... -|| .-..-..++-+
T Consensus 1 ~~s~r~~~l~~s~~~~i~~~a~~~~~~g~dvi~l~~G~pd~~~p~~i~~a~~~a~~~~~-~~Y------~~~~G~~~lr~ 73 (388)
T PRK08443 1 MLSKRIQVLSESITIAISTLAKELKAKGKDILSFSAGEPDFDTPQAIKDAAIKAIEKGF-TKY------TAVAGIPELLK 73 (388)
T ss_pred CHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCC------CCCCCCHHHHH
T ss_conf 95577524896899999999999985699848898998999879999999999985599-988------99988799999
Q ss_pred HHHHHHHHHCCCC--CEECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-C
Q ss_conf 9999999871886--30100001679-999999983154874881233448411147665433333220136658323-5
Q gi|254780349|r 83 IAIERAKKLFNVN--FVNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-G 158 (433)
Q Consensus 83 la~~~a~~lF~a~--~anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~ 158 (433)
-..+...+-+|.+ .-||-..+|++ |...++.++++|||.|+..+....++.. .....| ...++++.++++ .
T Consensus 74 aia~~~~~~~g~~~~pe~I~it~G~~~al~~~~~al~~pGD~Vlv~~P~Y~~y~~---~~~~~g--~~~v~v~~~~~~~~ 148 (388)
T PRK08443 74 AIATKLKKDNNLDYETNEIITSNGAKHSLFNVFQALIEKGDEVIIPSPYWVTYPE---LVKYSG--GVPVFIETDEENGF 148 (388)
T ss_pred HHHHHHHHHHCCCCCHHEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHH---HHHHHC--CEEEEEEECCCCCC
T ss_conf 9999999985899883129986887999999999980999989982687442399---999808--84799865543486
Q ss_pred CCCHHHHHHHHHHHCCCEEEEECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CC----
Q ss_conf 659899999998604667897055243-----53637999988641797899186201244320001232200-23----
Q gi|254780349|r 159 LLDMHEIESLAIEYNPKLIIVGGTAYS-----RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CH---- 228 (433)
Q Consensus 159 ~ID~d~~~~~a~~~kPklIi~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-AD---- 228 (433)
.+|.+++++.+ ..+.|++++-....| -.-+++++.++|++.|.+++.|..| ..|+-.|.+.++... .|
T Consensus 149 ~~d~~~l~~~i-~~~~k~iil~~P~NPTG~v~s~~~l~~l~~~a~~~~~~ii~DE~Y-~~l~~~~~~~~~~~~~~~~~~~ 226 (388)
T PRK08443 149 KITAEQLKKAI-TPKTKVLVLNTPSNPTGSVYSKEELEAIAKVLKGTDIWVLSDEMY-EKLVYDGEFVSVASVSEDMFKR 226 (388)
T ss_pred CCCHHHHHHHC-CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCHHH-HHHCCCCCCCCHHHHHCCCCCC
T ss_conf 77999999747-878739998689899884764478999999862357567422012-4322699878889972224467
Q ss_pred -EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Q ss_conf -5674045652--2567448983362056501664654322344556668999999997356489999999988899999
Q gi|254780349|r 229 -IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAK 305 (433)
Q Consensus 229 -vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~ 305 (433)
|+.+|.-|+| +|=|-|.+.+.++++.+.+++.......+-+.+.+.|+.+. +........+.-.+..-+|...+.+
T Consensus 227 ~I~i~S~SK~~~~~G~RiG~~~~p~~~l~~~~~~~~~~~~~~~~~~~q~aa~~a-l~~~~~~~~~~~~~~~~~~r~~~~~ 305 (388)
T PRK08443 227 TITINGLSKSVAMTGWRFGYMASKNKKLIKAMKKLQSQSTSNINSITQKAAIPA-LNGECDKDIEKMRQAFEKRRDLAVD 305 (388)
T ss_pred EEEECCCCHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 899803432005865146999818699999999997446787017999999999-8545247899999999999999999
Q ss_pred HHHHC-CCCCCCCCCCCCEEEECCCCCCCCHHH-HHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHH
Q ss_conf 98616-852334588898126316655676799-9998885671880378998999988898512246667307999899
Q gi|254780349|r 306 KLQFL-GFDIVSGGTDNHLMLVDLRSKRMTGKR-AESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKD 383 (433)
Q Consensus 306 ~L~~~-G~~vv~ggTd~H~vlvdl~~~~~~G~~-a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~e 383 (433)
.|.+. |+.+.. ..-+-.+|+|+...+.+..+ +++.|++.||.+. ||..- ....-+||.-. ..++.
T Consensus 306 ~l~~~~g~~~~~-P~g~~~~w~~~~~~~~d~~~f~~~ll~~~gV~v~----PG~~F--g~~g~vRl~~~------~~~e~ 372 (388)
T PRK08443 306 AINAIPGLSVYK-PDGAFYLFVNIKKIEKDSMKFCKKLLEQEGVAVV----PGIGF--GMEGYFRLSFA------TSIES 372 (388)
T ss_pred HHHHCCCCEEEC-CCEEEEEEEECCCCCCCHHHHHHHHHHHCCEEEE----CCCCC--CCCCEEEEEEE------CCHHH
T ss_conf 987478967616-8834799788888899999999999981999997----27435--88985999982------88999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999960
Q gi|254780349|r 384 FEYIGELIAQILD 396 (433)
Q Consensus 384 m~~iA~li~~~L~ 396 (433)
+++-.+-|.+.|+
T Consensus 373 l~ea~~RL~~~l~ 385 (388)
T PRK08443 373 IKKGIERIANFVK 385 (388)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999999
No 52
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.74 E-value=8.2e-16 Score=130.59 Aligned_cols=332 Identities=16% Similarity=0.180 Sum_probs=209.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC-E
Q ss_conf 99999999999998388810430-102989999830510288657988875336006799999999999998718863-0
Q gi|254780349|r 20 DVFSLIGQESCRQNDEIQLIASE-NIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNF-V 97 (433)
Q Consensus 20 ei~~~i~~e~~rq~~~l~LiASE-N~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~-a 97 (433)
||.+.|+++....-+.-.-.+|- ..+.|.+.++..- +.++-. .. .-.|.+ +-++|.-++.-..+|||++- .
T Consensus 10 ~v~~~l~~~~~~d~~~~~~~~~~~~~~~~~a~~a~~~-~~~~N~-~~--~~~~P~---~~~mE~~vv~~~a~l~g~p~~~ 82 (375)
T PRK13520 10 EILSELEEYRSEDLKYERILSSMCTKPHPIAREAHEM-FLETNL-GD--PGLFPG---TAKLEREVVRMLGELLHLPDAY 82 (375)
T ss_pred HHHHHHHHHHCCCCCHHHEEEEEECCCHHHHHHHHHH-HHHHCC-CC--CCCCHH---HHHHHHHHHHHHHHHCCCCCCE
T ss_conf 9999999987148997573477647834999999999-996178-98--533877---9999999999999980999880
Q ss_pred ECCCHHHHHHHHHHHHHHH--CCCCE--EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 1000016799999999831--54874--8812334484111476654333332201366583235659899999998604
Q gi|254780349|r 98 NVQSHSGSQMNQGVFLALM--HPGDS--FMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYN 173 (433)
Q Consensus 98 nvqp~SG~~An~av~~ALl--~pGD~--Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~k 173 (433)
-+=.-.||.||+.++.+-= .++++ |+. +...|.|.-+...+.|. +...-++|+ ++.+|.+++++.+.+..
T Consensus 83 G~~tsGGTes~l~Al~aaR~~~~~~~p~iv~---~~~aH~s~~Kaa~~~gi--~~~~vp~d~-~~~~d~~~l~~~i~~~t 156 (375)
T PRK13520 83 GYITSGGTEANIQAVRAARNLADAEKPNIVV---PESAHFSFDKAADMLGL--ELRRAPLDE-DYRVDVKSVEDLIDDNT 156 (375)
T ss_pred EEEECHHHHHHHHHHHHHHHHCCCCCCEEEE---ECCCHHHHHHHHHHCCC--EEEEEEECC-CCCCCHHHHHHHHHHCC
T ss_conf 8995618999999999997626899987999---67316999999997495--569940388-88698999999886495
Q ss_pred CCEE-EEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHC-CCCCC----CCCCEEEECCCCCCCCCCC-EEE
Q ss_conf 6678-970552435363799998864179789918620124432000-12322----0023567404565225674-489
Q gi|254780349|r 174 PKLI-IVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQ-HPSPV----PHCHIVTTTTHKSLRGPRG-GLI 246 (433)
Q Consensus 174 PklI-i~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~-~~~Pl----~~ADvvt~sTHKtl~GPrg-GiI 246 (433)
.-+| .+|.+.+.-.-|++++.+||.+.|.++++|+| +.|+++.=. ..-|+ +.+|-++.+.||.+.-|-| |++
T Consensus 157 i~vvatagtt~~G~iDpi~~i~~i~~~~~i~lHVDaa-~GGf~~pf~~~~~~~df~l~~vdSIs~d~HK~g~~p~g~g~v 235 (375)
T PRK13520 157 IGIVGIAGTTELGQVDPIPELSKIALENDIFLHVDAA-FGGFVIPFLDDPYDFDFSLPGVSSITIDPHKMGLAPIPAGGI 235 (375)
T ss_pred EEEEEECCCCCCEEECCHHHHHHHHHHCCCEEEEECC-CCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEE
T ss_conf 7999925887882235999999999975974998625-520221125766400047788026424611136515771599
Q ss_pred EECCCCHHHHCCHHH-------CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 833620565016646-------5432234455666899999999735648999999998889999998616852334588
Q gi|254780349|r 247 MTNHADLAKKINSAI-------FPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGT 319 (433)
Q Consensus 247 ~~~~~e~~~~i~~av-------fPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggT 319 (433)
++|++++.+.+.... -|.++|+---..+++.-.+|...-...|++..++++++|+.|++.|.+.||.++.. -
T Consensus 236 l~r~~~~~~~~~~~~~Yl~~~~~~tl~gSR~g~~~~~~Wa~l~~~G~~Gy~~~~~~~~~~a~~la~~l~~~g~e~~~~-P 314 (375)
T PRK13520 236 LFRDPEFLDALDVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRYLVEELEKLGFEPVIE-P 314 (375)
T ss_pred EECCHHHHHHHCCCCHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC-C
T ss_conf 987889998724677143589873560588775599999999997399999999999999999999998679989708-9
Q ss_pred CCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCC
Q ss_conf 898126316655676799999888567188037899899998889851224666730799
Q gi|254780349|r 320 DNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGF 379 (433)
Q Consensus 320 d~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~ 379 (433)
+..+|.. ++.+ -....+.|.+-|=.+|... .|.++||=+-.-+++++
T Consensus 315 ~~~iV~F--r~~~--~~~l~d~l~~~GW~v~~~~---------~P~~lhivv~~~~~~~~ 361 (375)
T PRK13520 315 VLNIVAF--DDPN--PHEVRKKLRERGWRVSVTR---------CPEALRIVVMPHVTREH 361 (375)
T ss_pred CCEEEEE--ECCC--HHHHHHHHHHCCCEECCCC---------CCCEEEEEEECCCCHHH
T ss_conf 8139999--5799--9999999997698745788---------99848999959999899
No 53
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.74 E-value=1.4e-15 Score=129.00 Aligned_cols=267 Identities=16% Similarity=0.183 Sum_probs=191.0
Q ss_pred HHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCC
Q ss_conf 99999998718863010000167999999998315487488123344841114766543333322013665832---356
Q gi|254780349|r 83 IAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKE---DGL 159 (433)
Q Consensus 83 la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~---~~~ 159 (433)
-|.++|.++||+++.-...-+-|.||.+|.+|+++|||+|+.- .--|-|+-+-...+|..--...-..|+. -+-
T Consensus 74 eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvd---RN~HKSi~~glilaGa~Pvyl~p~~np~~gi~gg 150 (557)
T COG1982 74 EAQELAARVFGADHTYFVVNGTSTANKAVINAVLTPGDKVLVD---RNCHKSIHHGLILAGATPVYLEPSRNPLYGIIGG 150 (557)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEC---CCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCC
T ss_conf 9999999986888629997782289999998603899989965---8763788889987488327841777854465378
Q ss_pred CCHHHHHHHHHHHCC--C-EEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCC-C-CCEEEECC
Q ss_conf 598999999986046--6-78970552435363799998864179789918620124432000123220-0-23567404
Q gi|254780349|r 160 LDMHEIESLAIEYNP--K-LIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVP-H-CHIVTTTT 234 (433)
Q Consensus 160 ID~d~~~~~a~~~kP--k-lIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~-~-ADvvt~sT 234 (433)
|+.+.+.+...+++- | +|+...+.|.-..|.+++.+.+...++++.||.+|-+=..-.+..|++-. . +|++|.||
T Consensus 151 I~~~~~~~al~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~~tqS~ 230 (557)
T COG1982 151 IPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADFVTQST 230 (557)
T ss_pred CCHHHHHHHHHHCHHHHHEEEEECCCCCEEEECHHHHHHHHHHCCCEEEHHHCCCCCCCCCCCCCCHHHHCCCEEEEEEH
T ss_conf 69899879998471304068896485324760599999997531866888645774335555574114545743898105
Q ss_pred CCCCCC-CCCEEEEECC--CCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH----HHHHH
Q ss_conf 565225-6744898336--2056501664654322344556668999999997356489999999988899----99998
Q gi|254780349|r 235 HKSLRG-PRGGLIMTNH--ADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQA----LAKKL 307 (433)
Q Consensus 235 HKtl~G-PrgGiI~~~~--~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~----La~~L 307 (433)
||+|++ -|+.+|-.++ .--.++++.+..=-..++|.-.-+|++=+| +......++.--+.+++.+=. +.+..
T Consensus 231 HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~ASlD~A-r~~~~~~G~~l~~~~~~~~i~~r~~~~~~~ 309 (557)
T COG1982 231 HKLLAALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLMASLDVA-RMQEGNAGRELWQEVIDEAIDFRKALRRLI 309 (557)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 4421234366787508876577899999999880679558999889999-987543347888888999999999999988
Q ss_pred HHC-CCCCCCCC-------------C-CCCE------EEECCCCCCCCHHHHHHHHHHCCEEEECCC
Q ss_conf 616-85233458-------------8-8981------263166556767999998885671880378
Q gi|254780349|r 308 QFL-GFDIVSGG-------------T-DNHL------MLVDLRSKRMTGKRAESILGRVSITCNKNS 353 (433)
Q Consensus 308 ~~~-G~~vv~gg-------------T-d~H~------vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~ 353 (433)
.+. +|.++... . |++. +.|.+.++|++|..+++.|.+.||+.-|+.
T Consensus 310 ~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~e~gii~e~~~ 376 (557)
T COG1982 310 NEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLREHGIIPEETG 376 (557)
T ss_pred HHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEECC
T ss_conf 7648864026655577533222122344542036607999657789739999999997588145317
No 54
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.73 E-value=7.8e-16 Score=130.75 Aligned_cols=246 Identities=18% Similarity=0.233 Sum_probs=167.7
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCC-CCCCC
Q ss_conf 00679999999999999871886301000016799999999831548748812334484111476654333332-20136
Q gi|254780349|r 73 GCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWF-KAIPY 151 (433)
Q Consensus 73 G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~-~~~~y 151 (433)
|+--.+.+| ++..+|-|++++-+-+ ||..|-.++++++++|||+|+..+--.||-... .-.+..++- ++..
T Consensus 50 gnPT~~~lE----~~la~LEg~~~a~~~~-SGMaAis~~l~~~l~~Gd~vv~~~~~Yg~T~~l--~~~~~~~~gi~v~~- 121 (386)
T PRK08045 50 GNPTRDVVQ----RALAELEGGAGAVLTN-TGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRL--FDSLAKRGCYRVLF- 121 (386)
T ss_pred CCHHHHHHH----HHHHHHHCCCCEEEEC-CHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHH--HHHHHCCCCEEEEE-
T ss_conf 886699999----9999980998379856-789999999997079999899837863489999--99872079579999-
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CC
Q ss_conf 6583235659899999998604667897055243--53637999988641797899186201244320001232200-23
Q gi|254780349|r 152 NVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CH 228 (433)
Q Consensus 152 ~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-AD 228 (433)
+| .-|.+.+++.+ ..++|+|++...+.| +..|++++.+||++.|+++++|.. .|+..+++|+++ ||
T Consensus 122 -~d----~~d~~~~~~~i-~~~Tklv~~EspsNP~l~v~Di~~i~~~a~~~g~~~vvDNT-----~atP~~~~Pl~~GaD 190 (386)
T PRK08045 122 -VD----QGDEQALRAAL-AEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNT-----FLSPALQNPLALGAD 190 (386)
T ss_pred -EC----CCCHHHHHHHC-CCCCEEEEEECCCCCCCEECCCHHHHHHHHHCCCEEEEECC-----CCCHHCCCCCCCCCC
T ss_conf -69----99989999753-77855999977999876105769999999976998998275-----232311273003887
Q ss_pred EEEECCCCCCCCCC---CEEEEECCCCHHHHCCHH-HCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Q ss_conf 56740456522567---448983362056501664-65432234455666899999999735648999999998889999
Q gi|254780349|r 229 IVTTTTHKSLRGPR---GGLIMTNHADLAKKINSA-IFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALA 304 (433)
Q Consensus 229 vvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~a-vfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La 304 (433)
||..|+.|.+.|-- ||.|.++++++..++... ..-|...+|+- + ..+.--++ -...-.+|..+||..+|
T Consensus 191 ivvhS~TKyi~GhsD~l~G~vv~~~~~~~~~~~~~~~~~G~~~~p~~----a--~l~~rGL~-TL~lRm~~~~~nA~~lA 263 (386)
T PRK08045 191 LVLHSCTKYLNGHSDVVAGVVIAKDPEVVTELAWWANNIGVTGGAFD----S--YLLLRGLR-TLVPRMELAQRNAQAIV 263 (386)
T ss_pred EEEEECCEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCHHH----H--HHHHHCCC-CHHHHHHHHHHHHHHHH
T ss_conf 89996661305887723489981778899999999998587789889----9--99983688-77889999999999999
Q ss_pred HHHHHCCC--CCCCCCCCCC---------------EEEECCCCCCCCHHHHHHHHHHCCE
Q ss_conf 99861685--2334588898---------------1263166556767999998885671
Q gi|254780349|r 305 KKLQFLGF--DIVSGGTDNH---------------LMLVDLRSKRMTGKRAESILGRVSI 347 (433)
Q Consensus 305 ~~L~~~G~--~vv~ggTd~H---------------~vlvdl~~~~~~G~~a~~~Le~~gI 347 (433)
+.|.+... +|...|-.+| ++-++++. +-..+.+.+++..+
T Consensus 264 ~~L~~hp~V~~V~yPgL~s~p~h~la~~q~~g~Ggm~sf~l~g---~~~~~~~f~~~l~l 320 (386)
T PRK08045 264 KYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG---DEQTLRRFLGGLSL 320 (386)
T ss_pred HHHHCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCEEEEEECC---CHHHHHHHHHHCCC
T ss_conf 9986399853798999989957799997089997357999659---79999999970883
No 55
>PRK09276 aspartate aminotransferase; Provisional
Probab=99.73 E-value=1.9e-14 Score=121.07 Aligned_cols=355 Identities=16% Similarity=0.114 Sum_probs=215.1
Q ss_pred HHHHHHHHCHHHHHHH-HHHHHH---HHHCCCCCCCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 7646978589999999-999999---9838881043010--298999983051028865798887533600679999999
Q gi|254780349|r 10 FQQSLIESDPDVFSLI-GQESCR---QNDEIQLIASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENI 83 (433)
Q Consensus 10 ~~~~l~~~Dpei~~~i-~~e~~r---q~~~l~LiASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~l 83 (433)
+.+.+....|....-| +.-.+. -++-|+|-..+.- +++.+.+++...+.+.-..+ |+..+-..++-+.
T Consensus 4 ~s~r~~~~~~~~~~~i~~~a~~~~~~G~dvi~l~~G~pd~~~p~~i~~al~~a~~~~~~~~------Y~~~~G~~~LRea 77 (385)
T PRK09276 4 LADRIENLPPYLFAEIDKKKAEKIARGVDVISLGIGDPDMPTPKHIVEAMKKAAEDPANHQ------YPSYEGMLEFRKA 77 (385)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCC------CCCCCCHHHHHHH
T ss_conf 6789750898899999999999984799818897998999989999999999980877766------5997271999999
Q ss_pred HHHHHHHHCCCCCE---ECCCHHHH-HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-C
Q ss_conf 99999987188630---10000167-9999999983154874881233448411147665433333220136658323-5
Q gi|254780349|r 84 AIERAKKLFNVNFV---NVQSHSGS-QMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-G 158 (433)
Q Consensus 84 a~~~a~~lF~a~~a---nvqp~SG~-~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~ 158 (433)
..+..++.+|.+.- +|-..+|+ .|...++.++++|||.|+..+....++.. .......+.+.+++++++ .
T Consensus 78 ia~~~~~~~g~~~~p~~~vv~t~Ga~~al~~~~~~l~~pGD~Vli~~P~Y~~y~~-----~~~~~g~~~v~vp~~~~~~~ 152 (385)
T PRK09276 78 VADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDYVLVPDPGYPVYAI-----GTIFAGGEPYFMPLKEENGF 152 (385)
T ss_pred HHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHH-----HHHHCCCEEEECCCCCCCCC
T ss_conf 9999999829876867769987884499999999973999989988886620599-----99986997850686666798
Q ss_pred CCCHHHHHHHHHHHCCCEEEEECCCCC--C---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHC-CCCCCCC---CC-
Q ss_conf 659899999998604667897055243--5---363799998864179789918620124432000-1232200---23-
Q gi|254780349|r 159 LLDMHEIESLAIEYNPKLIIVGGTAYS--R---VWDWERFRSIADSIGAYLMADISHISGLVVGGQ-HPSPVPH---CH- 228 (433)
Q Consensus 159 ~ID~d~~~~~a~~~kPklIi~G~S~y~--~---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~-~~~Pl~~---AD- 228 (433)
.+|+|++++.+. .+.|+|++-....| . .-.++++.++|.+++.+++.|..|- .|+-.+. +++.+.. .|
T Consensus 153 ~~d~~~l~~~~~-~~~k~iil~~P~NPTG~v~s~~~l~~l~~la~~~~i~ii~DEiY~-~l~~~~~~~~s~~~~~~~~~~ 230 (385)
T PRK09276 153 LPDLDAIPEDVA-RKAKLMFINYPNNPTGAVADLEFFEKVVDFAKKYDIIVCHDNAYS-EIAYDGYKPPSFLEVPGAKDV 230 (385)
T ss_pred CCCHHHHHHHHC-CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHH-HHCCCCCCCCCHHHCCCCCCC
T ss_conf 579999997510-167299989998985511118899999876325575697544422-210388888776553454244
Q ss_pred -EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Q ss_conf -5674045652--2567448983362056501664654322344556668999999997356489999999988899999
Q gi|254780349|r 229 -IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAK 305 (433)
Q Consensus 229 -vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~ 305 (433)
|+.+|.-|+| +|=|-|.+..+. ++.+++.+.---...+.+..-+.|+.+ ++.. .+...++..+..-+|...|.+
T Consensus 231 ~i~~~S~SK~~~~~G~RvG~~~~~~-~~~~~l~~~~~~~~~~~~~~~q~a~~~-al~~-~~~~~~~~~~~~~~rr~~~~~ 307 (385)
T PRK09276 231 GIEFHSLSKTYNMTGWRIGFAVGNA-DLIAGLGKVKSNVDSGVFQAIQEAAIA-ALNG-PQDVVEELRAIYQERRDILVE 307 (385)
T ss_pred CCEECCCCCCCCCCCCEEEEEECCH-HHHHHHHHHHHHCCCCCHHHHHHHHHH-HHHC-CHHHHHHHHHHHHHHHHHHHH
T ss_conf 3030465455688762079997599-999999999976557710999999999-9848-699999999998999999999
Q ss_pred HHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHH-HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHH
Q ss_conf 986168523345888981263166556767999-9988856718803789989999888985122466673079998999
Q gi|254780349|r 306 KLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRA-ESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDF 384 (433)
Q Consensus 306 ~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a-~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em 384 (433)
.|.+.|+++.. ..-+-.+|+|+.. +.+..+. ...|+++||.+. ||..=...-..-+||.-. ..++++
T Consensus 308 ~L~~~g~~~~~-p~gg~~~w~~l~~-~~~~~~~~~~ll~~~gV~v~----PG~~Fg~~g~~~iRl~~a------~~~e~l 375 (385)
T PRK09276 308 GLNSLGWEVEK-PKATFYVWAPVPK-GYTSAEFATLLLDKAGIVVT----PGNGFGTAGEGYFRIALT------VPDERI 375 (385)
T ss_pred HHHHCCCEEEC-CCEEEEEEEECCC-CCCHHHHHHHHHHHCCEEEE----CCHHHCCCCCCEEEEEEE------CCHHHH
T ss_conf 99876986626-8857799788999-98989999999981999998----874218899886999975------999999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254780349|r 385 EYIGELIA 392 (433)
Q Consensus 385 ~~iA~li~ 392 (433)
++-.+-|.
T Consensus 376 ~eal~Rl~ 383 (385)
T PRK09276 376 EEAVERIK 383 (385)
T ss_pred HHHHHHHH
T ss_conf 99999984
No 56
>PRK08362 consensus
Probab=99.73 E-value=2.2e-14 Score=120.69 Aligned_cols=359 Identities=16% Similarity=0.138 Sum_probs=213.2
Q ss_pred HHHHHHHCHH-HHHHHHHHHHHHHHCCCCCCCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 6469785899-999999999999838881043010--2989999830510288657988875336006799999999999
Q gi|254780349|r 11 QQSLIESDPD-VFSLIGQESCRQNDEIQLIASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIER 87 (433)
Q Consensus 11 ~~~l~~~Dpe-i~~~i~~e~~rq~~~l~LiASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~ 87 (433)
.+.++...|- |.++.+ -....++.|+|--.+.- +++.+++++...+.. |. ..|+-..-..++-+...+.
T Consensus 4 s~r~~~~~~s~ir~~~~-~~~~~~dvI~l~~g~pd~~~p~~i~~a~~~~~~~----~~---~~Y~~~~G~~~Lr~aia~~ 75 (389)
T PRK08362 4 SDRLDLVNPSEIRKLFD-LAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDK----GL---THYGPNIGLPELREAIAEK 75 (389)
T ss_pred HHHHHCCCCCHHHHHHH-HHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHC----CC---CCCCCCCCHHHHHHHHHHH
T ss_conf 16742399488999999-9738998089999979998789999999999855----87---6889985709999999999
Q ss_pred HHHHCCCCC---EECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCH
Q ss_conf 998718863---0100001679-999999983154874881233448411147665433333220136658323-56598
Q gi|254780349|r 88 AKKLFNVNF---VNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-GLLDM 162 (433)
Q Consensus 88 a~~lF~a~~---anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~~ID~ 162 (433)
.++-+|.+. -+|-..+|++ |...++.++++|||.|+..+....++.. .....| .+.+.++.++++ ..+|.
T Consensus 76 ~~~~~g~~~~p~~~i~it~G~~~al~~~~~~l~~pGD~Vlv~~P~Y~~y~~---~~~~~g--~~~v~vp~~~~~~~~~d~ 150 (389)
T PRK08362 76 LKKQNGIEADPKKEIMVLVGANQAFLMGLATFLKDGEEVLIPSPMFVSYAP---AVILAG--GKPVEVPTYEENEFRLNV 150 (389)
T ss_pred HHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH---HHHHCC--CEEEEEECCCCCCCCCCH
T ss_conf 988409999976439981886999999999975899989981586542689---999749--989998545777887699
Q ss_pred HHHHHHHHHHCCCEEEEECCCCC--CC---CCHHHHHHHHHHCCCEEEECCCCHHHHHHHHC-CCCCCCC---CC--EEE
Q ss_conf 99999998604667897055243--53---63799998864179789918620124432000-1232200---23--567
Q gi|254780349|r 163 HEIESLAIEYNPKLIIVGGTAYS--RV---WDWERFRSIADSIGAYLMADISHISGLVVGGQ-HPSPVPH---CH--IVT 231 (433)
Q Consensus 163 d~~~~~a~~~kPklIi~G~S~y~--~~---~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~-~~~Pl~~---AD--vvt 231 (433)
|++++.+. .++|++++-....| .. -+++++.++|.+++.+++.|..|- .|+-.|. +++.... .| |+.
T Consensus 151 ~~l~~~i~-~~~k~iil~~P~NPtG~v~s~~~l~~i~~~a~~~~~~ii~DEiY~-~l~~~~~~~~s~~~~~~~~~~~i~~ 228 (389)
T PRK08362 151 DDLKKYVT-EKTRALIINSPNNPTGSVLTKKDLEEIADFAVEHDLMVISDEVYE-HFIYDGVKHYSIASLDGMFERTITV 228 (389)
T ss_pred HHHHHHCC-CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHH-HHCCCCCCCCCHHHCCCCCCCEEEE
T ss_conf 99997454-468299984898984746319999999999875495798146456-4101897776866604544520230
Q ss_pred ECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4045652--256744898336205650166465432234455666899999999735-6489999999988899999986
Q gi|254780349|r 232 TTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALS-SEFRDYAKQIVLNSQALAKKLQ 308 (433)
Q Consensus 232 ~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~-~~f~~Ya~qvv~NA~~La~~L~ 308 (433)
+|.-|+| +|=|-|.+.+.+ ++.+++.+.---...+.+.+.+.|+. .+|..... .......+..-+|...+.+.|.
T Consensus 229 ~S~SK~~~l~G~RiG~~i~~~-~~i~~~~~~~~~~~~~~~~~~q~a~~-~al~~~~~~~~~~~~~~~~~~~r~~~~~~l~ 306 (389)
T PRK08362 229 NGFSKTFAMTGWRLGFVAAPS-WVIEKMVKFQMYNATCPVTFIQYAAA-KALRDERSWKAVEEMRKEYDRRRNLVWKRLN 306 (389)
T ss_pred CCCHHHCCCCCCCEEEEECCH-HHHHHHHHHHHHCCCCCCHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 331010168765369998089-99999999998604788659999999-9985970479999987889999999999888
Q ss_pred HCCCCCCCCCCCCCEEEECCCCCCCCHHHHH-HHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHH
Q ss_conf 1685233458889812631665567679999-988856718803789989999888985122466673079998999999
Q gi|254780349|r 309 FLGFDIVSGGTDNHLMLVDLRSKRMTGKRAE-SILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYI 387 (433)
Q Consensus 309 ~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~-~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~i 387 (433)
+.|++.+. ..-+-.+|++++..+++..++. ..|+++||.+. ||..=.+.-..-+||.-. ..++++++-
T Consensus 307 ~~g~~~~~-P~g~~~~w~~~~~~~~~~~~~~~~ll~e~gV~~~----PG~~Fg~~~~~~~Rl~~a------~~~e~l~ea 375 (389)
T PRK08362 307 EMGLPTVK-PKGAFYIFPRIRDTGLTSKEFSELMLKEAKVAVV----PGSAFGKAGEGYIRISYA------TAYEKLEEA 375 (389)
T ss_pred HCCCCEEC-CCEEEEEEEECCCCCCCHHHHHHHHHHHCCEEEE----CCHHHCCCCCCEEEEEEC------CCHHHHHHH
T ss_conf 75995557-8825899478888898999999999982999998----673338899897999971------999999999
Q ss_pred HHHHHHHHHC
Q ss_conf 9999999602
Q gi|254780349|r 388 GELIAQILDG 397 (433)
Q Consensus 388 A~li~~~L~~ 397 (433)
.+-|.++|+.
T Consensus 376 ~~RL~~~l~e 385 (389)
T PRK08362 376 MDRMEKVLKE 385 (389)
T ss_pred HHHHHHHHHH
T ss_conf 9999999985
No 57
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.72 E-value=6.5e-14 Score=117.37 Aligned_cols=354 Identities=16% Similarity=0.147 Sum_probs=211.9
Q ss_pred HHHHHHHCHHHHHHHHHH-HHHH---HHCCCCCCCC-CC-CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 646978589999999999-9999---8388810430-10-2989999830510288657988875336006799999999
Q gi|254780349|r 11 QQSLIESDPDVFSLIGQE-SCRQ---NDEIQLIASE-NI-VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIA 84 (433)
Q Consensus 11 ~~~l~~~Dpei~~~i~~e-~~rq---~~~l~LiASE-N~-~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la 84 (433)
.+.+....|-....+.++ .+++ ++.|+|--.+ .+ +++.+++++...+.... -|| +-.+-..++-+..
T Consensus 5 s~r~~~~~~s~~~~~~~~a~~~~~~G~dvi~l~~g~pd~~~p~~i~~a~~~~~~~~~-~~Y------~~~~G~~~LR~ai 77 (389)
T PRK05764 5 SKRVARVKPSATLAVTAKAKELKAAGRDVISLGAGEPDFDTPEHIKEAAIAALDEGK-TKY------TPAAGIPELREAI 77 (389)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCC------CCCCCCHHHHHHH
T ss_conf 789851894699999999999997799827888978999988999999999984799-999------8998879999999
Q ss_pred HHHHHHHCCCC--CEECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC
Q ss_conf 99999871886--30100001679-999999983154874881233448411147665433333220136658323-565
Q gi|254780349|r 85 IERAKKLFNVN--FVNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-GLL 160 (433)
Q Consensus 85 ~~~a~~lF~a~--~anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~~I 160 (433)
.+..++-+|.+ .-||-..+|++ |...++.+|++|||.|+..+....++.. . +...+-+.++++.++++ ..+
T Consensus 78 a~~~~~~~g~~v~~d~I~it~G~~~al~~~~~~l~~pGD~Vlv~~P~Y~~y~~---~--~~~~g~~~v~vp~~~~~~~~~ 152 (389)
T PRK05764 78 AEKLKRDNGLDYEPDQIIVTTGAKQALYNAFMALLNPGDEVIIPAPYWVSYPE---M--VKLAGGKPVFVPTGEENGFKL 152 (389)
T ss_pred HHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH---H--HHHCCCEEEEECCCHHHCCCC
T ss_conf 99999986899857978988887999999999958999989985786245899---9--996498655504362208768
Q ss_pred CHHHHHHHHHHHCCCEEEEECCCCC--C---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHH-CCCCCCCCC------C
Q ss_conf 9899999998604667897055243--5---36379999886417978991862012443200-012322002------3
Q gi|254780349|r 161 DMHEIESLAIEYNPKLIIVGGTAYS--R---VWDWERFRSIADSIGAYLMADISHISGLVVGG-QHPSPVPHC------H 228 (433)
Q Consensus 161 D~d~~~~~a~~~kPklIi~G~S~y~--~---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g-~~~~Pl~~A------D 228 (433)
|.|++++.+ ..++|+|++-....| . .-.++++.++|.+.+.+++.|..|- .|+-.| .++++.... =
T Consensus 153 d~~~l~~~~-~~~~k~i~l~~P~NPtG~v~s~~~l~~l~~~a~~~~i~ii~DEiY~-~l~~~~~~~~~~~~~~~~~~~~v 230 (389)
T PRK05764 153 TPEQLEAAI-TPKTKALILNSPSNPTGAVYSKEELEAIADVAVEHDIWVLSDEIYE-KLVYDGFEFTSIASLSPELFDRT 230 (389)
T ss_pred CHHHHHHHC-CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCC-CCCCCCCCCCCHHHHCCHHHCCC
T ss_conf 999999863-8466499988998998867577999999999886353275101343-55568988888778490121143
Q ss_pred EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5674045652--25674489833620565016646543223445566689999999973564899999999888999999
Q gi|254780349|r 229 IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKK 306 (433)
Q Consensus 229 vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~ 306 (433)
|+.+|.-|+| +|=|-|.+..++ ++.+++.+.......+.+.+.+.|+.+ +|.. .....+...+..-+|.+.|.+.
T Consensus 231 i~~~S~SK~~~lpGlRiG~~i~~~-~li~~~~~~~~~~~~~~~~~~Q~aa~~-al~~-~~~~~~~~~~~~~~rr~~l~~~ 307 (389)
T PRK05764 231 ITVNGFSKAYAMTGWRLGYAAGPK-ELIKAMSKLQSQSTSNPTSIAQYAAIA-ALTG-PQDAVEEMRKAFEERRDLMVDG 307 (389)
T ss_pred EEECCCCCCCCCCCCCEEEEEECH-HHHHHHHHHHHHCCCCCCHHHHHHHHH-HHHC-CHHHHHHHHHHHHHHHHHHHHH
T ss_conf 143144302478660369998299-999999999854147898699999999-9859-7878999999999999999999
Q ss_pred HHHC-CCCCCC-CCCCCCEEEECCCCCCCCHHHH-HHHHHHCCEEEECCCCCCCCCCCCCC-CCCCCCCHHHHHCCCCHH
Q ss_conf 8616-852334-5888981263166556767999-99888567188037899899998889-851224666730799989
Q gi|254780349|r 307 LQFL-GFDIVS-GGTDNHLMLVDLRSKRMTGKRA-ESILGRVSITCNKNSIPFDPESPFIT-SGIRLGTPSGTTRGFKEK 382 (433)
Q Consensus 307 L~~~-G~~vv~-ggTd~H~vlvdl~~~~~~G~~a-~~~Le~~gI~~Nkn~iP~D~~~~~~~-sGiRlGT~aiTtrG~~e~ 382 (433)
|.+. |+++.. .| +-.+|+|++....+..+. +..|+++||.+. ||. .|-. .-+||.-. ..++
T Consensus 308 l~~~~g~~~~~P~G--~~~~~~~~~~~~~~~~~~~~~ll~~~gV~~~----PG~---~Fg~~g~~Rl~fa------~~~e 372 (389)
T PRK05764 308 LNEIPGLECPKPEG--AFYVFPNVSKGITDSEDFAEALLEEAGVAVV----PGI---AFGAPGYVRLSYA------TSLE 372 (389)
T ss_pred HHHCCCCEECCCCC--CEEEEEECCCCCCCHHHHHHHHHHHCCEEEE----ECC---CCCCCCEEEEEEE------CCHH
T ss_conf 98489988647881--0799588888899999999999981999998----073---2489984999983------8899
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999960
Q gi|254780349|r 383 DFEYIGELIAQILD 396 (433)
Q Consensus 383 em~~iA~li~~~L~ 396 (433)
.+++-.+-|.++|+
T Consensus 373 ~l~ea~~RL~~~l~ 386 (389)
T PRK05764 373 DIEEALERIERFLK 386 (389)
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999999
No 58
>PRK07212 consensus
Probab=99.72 E-value=6.4e-14 Score=117.41 Aligned_cols=351 Identities=15% Similarity=0.166 Sum_probs=210.9
Q ss_pred HHHHHHHHCHHHH-HHHHHHHHHH---HHCCCCCCCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 7646978589999-9999999999---838881043010--298999983051028865798887533600679999999
Q gi|254780349|r 10 FQQSLIESDPDVF-SLIGQESCRQ---NDEIQLIASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENI 83 (433)
Q Consensus 10 ~~~~l~~~Dpei~-~~i~~e~~rq---~~~l~LiASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~l 83 (433)
+.+.+....|... ++.+.-.+.+ ++-|+|--.+.- +++.+++++...+.+-- -|| +-.+-..++-+.
T Consensus 4 ~s~r~~~~~~s~~~~i~~~a~~~~~~G~dvi~l~~g~pdf~~p~~i~ea~~~~~~~~~-~~Y------~~~~G~~~lr~a 76 (378)
T PRK07212 4 LSSRLARVEPSATLAISNKAKELEAEGVDVISLSVGEPDFDTPKHICDAAIDAMDRGK-THY------APSNGIPELREA 76 (378)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCC------CCCCCCHHHHHH
T ss_conf 7888853894699999999999986699837998988999988999999999985799-988------999999999999
Q ss_pred HHHHHHHHCCC--CCEECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999987188--630100001679-999999983154874881233448411147665433333220136658323565
Q gi|254780349|r 84 AIERAKKLFNV--NFVNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLL 160 (433)
Q Consensus 84 a~~~a~~lF~a--~~anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~I 160 (433)
..+..++-+|. +.-||-..+|++ |...++.++++|||+|+..+....++.. .. .....+.+.++++.+++.+
T Consensus 77 ia~~~~~~~g~~v~p~~I~vt~G~~~al~~~~~~l~~pGD~Vlv~~P~Y~~y~~---~~--~~~g~~~v~vpl~~~~~~~ 151 (378)
T PRK07212 77 IAEKLRTENHIDVTPDDVIVTPGAKQAIYEAMMAVLDDGDEVILLDPAWVSYEA---CI--KFAGGKPVWVPLNPEDFQL 151 (378)
T ss_pred HHHHHHHHHCCCCCHHEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH---HH--HHCCCEEEEEECCCCCCCC
T ss_conf 999999984899873319994789999999999847998989981796342568---99--9719969998355567852
Q ss_pred CHHHHHHHHHHHCCCEEEEECCCCC--C---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC---CC--EE
Q ss_conf 9899999998604667897055243--5---3637999988641797899186201244320001232200---23--56
Q gi|254780349|r 161 DMHEIESLAIEYNPKLIIVGGTAYS--R---VWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH---CH--IV 230 (433)
Q Consensus 161 D~d~~~~~a~~~kPklIi~G~S~y~--~---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~---AD--vv 230 (433)
| +.+++.+ ..++|+|++-....| . .-.++++.++|.+.+.+++.|..| ..|+-++.+++.... .| |+
T Consensus 152 ~-~~l~~~i-~~~~k~i~l~~P~NPtG~v~s~~~l~~l~~la~~~~~~ii~DEiY-~~l~~~~~~~~~~~l~~~~~~~i~ 228 (378)
T PRK07212 152 P-DDLAEAI-TDKTKLIVVNSPSNPTGAVFGKESLQGVADLAVDHDLYVLSDEIY-EKIIYGKEHISLGSLDGMADRTIT 228 (378)
T ss_pred H-HHHHHHC-CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEECCCCCH-HHHHCCCCCCCHHHCCCCCCCCCE
T ss_conf 8-9999856-657829998899799898847176889999777424501330011-544048877774334454555403
Q ss_pred EECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 74045652--2567448983362056501664654322344556668999999997356489999999988899999986
Q gi|254780349|r 231 TTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQ 308 (433)
Q Consensus 231 t~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~ 308 (433)
.+|.-|+| +|=|-|.+..++ ++.+++.+.---...+.+.+.+.|+.+ ++.. .+...++..+...+|...|.+.|.
T Consensus 229 ~~S~SK~~~l~GlRvG~~~~~~-~~i~~~~~~~~~~~~~~~~~~q~aa~~-al~~-~~~~l~~~~~~~~~~r~~l~~~L~ 305 (378)
T PRK07212 229 INGFSKAYAMTGWRLGYLTAPE-EIIKQMGKVQSHSVSSATTFVQYGGVA-ALKG-PQDCVEEMRDEFEARRDILIDGLA 305 (378)
T ss_pred ECCCCCCCCCCCEEEEEEECCH-HHHHHHHHHHHHCCCCCCHHHHHHHHH-HHHC-CHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 3354213677760489897399-999999999864557887699999999-9968-778899999999999999999999
Q ss_pred HCCCCCCC-CCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCC-CCCCCHHHHHCCCCHHHHHH
Q ss_conf 16852334-58889812631665567679999988856718803789989999888985-12246667307999899999
Q gi|254780349|r 309 FLGFDIVS-GGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSG-IRLGTPSGTTRGFKEKDFEY 386 (433)
Q Consensus 309 ~~G~~vv~-ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sG-iRlGT~aiTtrG~~e~em~~ 386 (433)
+.|+++.. .| +-.+|+|+... +..-++..|+++||.+. ||. .|-++| +||.-. ..++.+++
T Consensus 306 ~~g~~~~~p~g--~~~~~~~~~~~--~~~~~~~ll~~~gV~v~----pG~---~Fg~~g~iRl~~a------~~~e~l~e 368 (378)
T PRK07212 306 DMGLECAPPDG--AFYAFPNVDGD--DTAVAERLLKDAHVAVT----PGS---AFGAPGWIRISYA------TSMERLKE 368 (378)
T ss_pred HCCCEECCCCE--EEEEEEECCCC--HHHHHHHHHHHCCEEEE----ECC---CCCCCCEEEEEEE------CCHHHHHH
T ss_conf 76986626881--69999978999--99999999970989998----174---4599993999980------89999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999996
Q gi|254780349|r 387 IGELIAQIL 395 (433)
Q Consensus 387 iA~li~~~L 395 (433)
-.+-|.++|
T Consensus 369 al~RL~~~L 377 (378)
T PRK07212 369 ALERLEKVL 377 (378)
T ss_pred HHHHHHHHH
T ss_conf 999999985
No 59
>PRK07778 consensus
Probab=99.71 E-value=7.4e-14 Score=116.97 Aligned_cols=347 Identities=18% Similarity=0.147 Sum_probs=211.7
Q ss_pred HHHHHHHHHHHHH---HCCCCCCCCC-C-CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9999999999998---3888104301-0-298999983051028865798887533600679999999999999871886
Q gi|254780349|r 21 VFSLIGQESCRQN---DEIQLIASEN-I-VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVN 95 (433)
Q Consensus 21 i~~~i~~e~~rq~---~~l~LiASEN-~-~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~ 95 (433)
+.++.++-.++|+ +.|+|--.|- + +++.+++++...+..-. -||+ -..-..++-+-..+..++.+|.+
T Consensus 15 ~~~i~~~a~~~~~~g~dvi~l~iG~Pd~~~P~~i~~a~~~a~~~~~-~~Y~------~~~G~p~LR~aia~~~~~~~g~~ 87 (386)
T PRK07778 15 VMDVWLAAAERQRTHGDLVNLSAGQPSAGAPEPVRAAAAAALHRNQ-LGYT------VALGIPELREAIAADYQRRHGIT 87 (386)
T ss_pred HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCC-CCCC------CCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 9999999999996699907885989999868999999999863499-9989------99784999999999999986899
Q ss_pred --CEECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHHH
Q ss_conf --30100001679-9999999831548748812334484111476654333332201366583235-6598999999986
Q gi|254780349|r 96 --FVNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDG-LLDMHEIESLAIE 171 (433)
Q Consensus 96 --~anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~-~ID~d~~~~~a~~ 171 (433)
.-||-..+|++ |...++.++++|||.|+..+...-++.. .+....-+.++++++++++ .+|.+.++++ .
T Consensus 88 ~~pe~I~vt~Ga~~al~~~~~~l~~pGD~Vlv~~P~Y~~y~~-----~~~~~g~~~v~vp~~~~~~~~~~~~~l~~~--~ 160 (386)
T PRK07778 88 VEPDDVVVTTGSSGGFLLAFLACFDVGDRVAMASPGYPCYRN-----ILSALGCEVVEIPCGPDTRFQPTAAMLAEL--D 160 (386)
T ss_pred CCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHH-----HHHHCCCEEEECCCCCCCCCCCHHHHHHHC--C
T ss_conf 885548981787999999999964999989986786510799-----999739825723677445667238898625--8
Q ss_pred HCCCEEEEECCCCC--C---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--C--CEEEECCCCCC--CC
Q ss_conf 04667897055243--5---3637999988641797899186201244320001232200--2--35674045652--25
Q gi|254780349|r 172 YNPKLIIVGGTAYS--R---VWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--C--HIVTTTTHKSL--RG 240 (433)
Q Consensus 172 ~kPklIi~G~S~y~--~---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--A--Dvvt~sTHKtl--~G 240 (433)
.+.|+|++-....| . .-.++++.++|.+.+.+++.|..+ ..|+-.|..+.+... . -|+.+|.-|+| +|
T Consensus 161 ~~~k~iil~~P~NPTG~v~s~~~l~~l~~la~~~~i~iisDEiY-~~l~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G 239 (386)
T PRK07778 161 PPVRGVIVASPANPTGTVIAPEELAAIASWCEASGVRLISDEVY-HGLVYEGAPPTSCAWETSREAVVVNSFSKYYAMTG 239 (386)
T ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCH-HHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
T ss_conf 66439998999898877850799999999985378799943432-53115899986430024786899930431125677
Q ss_pred CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CC
Q ss_conf 6744898336205650166465432234455666899999999735648999999998889999998616852334--58
Q gi|254780349|r 241 PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVS--GG 318 (433)
Q Consensus 241 PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~--gg 318 (433)
=|-|.+...+ ++.+.+.+.......+.+.+.+.|+.+.--.+ ...+...+.++..+|.+.|.+.|.+.|+..+. +|
T Consensus 240 ~RiG~~~~p~-~l~~~~~~~~~~~~~~~~~~~Q~aa~~al~~~-~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~p~~G 317 (386)
T PRK07778 240 WRLGWLLVPT-ELRRAVDRLTGNFTICPPALSQYAAVAAFTPE-ATAEADGHLAHYAENRRLLLDGLRALGITRLAPADG 317 (386)
T ss_pred CEEEEEEECH-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCE
T ss_conf 6069998489-99999999985076787789999999995601-289999999999999999999999759954179984
Q ss_pred CCCCEEEECCCCCCCCHHH-HHHHHHHCCEEEECCCCCCCCCCCCCCCC-CCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8898126316655676799-99988856718803789989999888985-122466673079998999999999999960
Q gi|254780349|r 319 TDNHLMLVDLRSKRMTGKR-AESILGRVSITCNKNSIPFDPESPFITSG-IRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 319 Td~H~vlvdl~~~~~~G~~-a~~~Le~~gI~~Nkn~iP~D~~~~~~~sG-iRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
+ -.+|+|+...+.+..+ +.+.|+++|+.+. ||..=.+....| +||+-.. .++++++-.+-|.+.|+
T Consensus 318 ~--fy~~~~~~~~~~d~~~f~~~Ll~~~gV~v~----PG~~Fg~~~g~~~vRlsf~~------~~~~l~eal~RL~~~l~ 385 (386)
T PRK07778 318 A--FYVYADVSHLTDDSLAFCSKLLADTGVAIA----PGIDFDTVRGNSFVRLSFAG------PTADIEEALRRIGSWLR 385 (386)
T ss_pred E--EEEEEECCCCCCCHHHHHHHHHHHCCEEEE----CCCCCCCCCCCCEEEEEEEC------CHHHHHHHHHHHHHHHC
T ss_conf 7--899788988899999999999983999997----58566889999969999839------89999999999999965
No 60
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.71 E-value=9.9e-15 Score=123.04 Aligned_cols=334 Identities=15% Similarity=0.151 Sum_probs=204.4
Q ss_pred HHHCCCCCCCC-C-CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC--EECCCHHHH-H
Q ss_conf 98388810430-1-02989999830510288657988875336006799999999999998718863--010000167-9
Q gi|254780349|r 32 QNDEIQLIASE-N-IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNF--VNVQSHSGS-Q 106 (433)
Q Consensus 32 q~~~l~LiASE-N-~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~--anvqp~SG~-~ 106 (433)
.++-|+|--.+ . .+++.+++++...+.+ |..+ |+-..-..++-+-..+..++-||.+. -+|-..+|+ .
T Consensus 23 ~~dvi~l~vgdpDf~~p~~i~~a~~~~~~~----g~~~---Y~~~~G~~~lreaia~~~~~~~g~~v~~d~I~it~G~~~ 95 (382)
T PRK06108 23 REDVLPFWFGESDLPTPDFIRDAAAAALAD----GETF---YTHNLGIPELREALARYVSRLHGATTPPERIAVTSSGVQ 95 (382)
T ss_pred CCCCEECCCCCCCCCCCHHHHHHHHHHHHC----CCCC---CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHH
T ss_conf 999178889898999889999999999847----9983---799988699999999999998788986684998078999
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 999999983154874881233448411147665433333220136658--323565989999999860466789705524
Q gi|254780349|r 107 MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVR--KEDGLLDMHEIESLAIEYNPKLIIVGGTAY 184 (433)
Q Consensus 107 An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d--~~~~~ID~d~~~~~a~~~kPklIi~G~S~y 184 (433)
|...++.++++|||.|+..+....++.. .+...|. +.+.++++ .....+|++++++.+. .++|++++-....
T Consensus 96 al~~~~~~~~~pGD~Vlv~~P~Y~~~~~---~~~~~g~--~~~~vpl~~~~~~~~~d~~~le~~~~-~~~k~iil~~P~N 169 (382)
T PRK06108 96 ALMLAAQALVGPGDEVVAVTPAWPNLVA---APKILGA--RVVCVPLQYGGGGWQLDVDRLLAAIT-PRTRALFINSPNN 169 (382)
T ss_pred HHHHHHHHHCCCCCEEEECCCCCCCHHH---HHHHCCC--EEEECCCCCCCCCCCCCHHHHHHHCC-CCCEEEEECCCCC
T ss_conf 9999999966999989981687865699---9997388--27853456667886679999996457-5664999889969
Q ss_pred C--C---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCC--CCC---CC--EEEECCCCC--CCCCCCEEEEECC
Q ss_conf 3--5---3637999988641797899186201244320001232--200---23--567404565--2256744898336
Q gi|254780349|r 185 S--R---VWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSP--VPH---CH--IVTTTTHKS--LRGPRGGLIMTNH 250 (433)
Q Consensus 185 ~--~---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~P--l~~---AD--vvt~sTHKt--l~GPrgGiI~~~~ 250 (433)
| + .-+++++.++|.+.+.+++.|..|. -|+-.+..+.| +.. .| |+.+|.-|| ++|-|-|.+.+.+
T Consensus 170 PtG~v~s~e~l~~l~~la~~~~v~iisDEiY~-~l~f~~~~~~ps~~~~~~~~~~~i~~~S~SK~f~~~G~RiG~ii~~~ 248 (382)
T PRK06108 170 PTGWTASRDDQQAILAHCRRHGLWIVADEVYE-RLYYGGGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPP 248 (382)
T ss_pred CCCHHCCHHHHHHHHHHHHCCCCEEECHHHHH-HHCCCCCCCCCHHHHHCCCCCEEEEEECCCHHCCCCCCEEEEEEECH
T ss_conf 96620447889999998762697535334333-30138998883466523667649998043031047676179999799
Q ss_pred CCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCC-CCCCCCEEEECC
Q ss_conf 205650166465432234455666899999999735648999999998889999998616-852334-588898126316
Q gi|254780349|r 251 ADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVS-GGTDNHLMLVDL 328 (433)
Q Consensus 251 ~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~-ggTd~H~vlvdl 328 (433)
++.+++.+..--...+.+.+.+.|+. .++.+ .....+++.+..-+|-+.|.+.|.+. |+++.. .|| -.+|+++
T Consensus 249 -~~~~~~~~~~~~~~~~~~~~~q~aa~-~al~~-~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~P~g~--~y~w~~~ 323 (382)
T PRK06108 249 -SLGQDLEKLIEYNTSCVPQFVQRAAV-AALDE-GEDFVAQLVARLRRARDHLVDALRALPGVEVPKPDGA--MYAFFRL 323 (382)
T ss_pred -HHHHHHHHHHHHCCCCCCHHHHHHHH-HHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEE--EEEEEEC
T ss_conf -99999999998703777689999999-99968-6265899999999999999999973799687378827--9998879
Q ss_pred CCCCCCHHH-HHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 655676799-9998885671880378998999988898512246667307999899999999999996
Q gi|254780349|r 329 RSKRMTGKR-AESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 329 ~~~~~~G~~-a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
.... +..+ +...|+++|+.+. ||..=.+....-+||.-. + .++++++-.+-|.++|
T Consensus 324 ~~~~-~~~~~~~~ll~~~gV~v~----PG~~Fg~~g~~~iRl~~a--~----~~~~l~eal~RL~~~l 380 (382)
T PRK06108 324 DGAT-DSLALAKRLVDEAGLGLA----PGTAFGPGGEGFLRWCFA--R----DPARLDEGVERLRRFL 380 (382)
T ss_pred CCCC-CHHHHHHHHHHHCCEEEE----CCHHHCCCCCCEEEEEEC--C----CHHHHHHHHHHHHHHH
T ss_conf 9999-999999999996999998----784118899997999962--9----9999999999999996
No 61
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.71 E-value=3.8e-14 Score=118.96 Aligned_cols=362 Identities=14% Similarity=0.154 Sum_probs=214.8
Q ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 677646978589999999999999983888104301--029899998305102886579888753360067999999999
Q gi|254780349|r 8 RFFQQSLIESDPDVFSLIGQESCRQNDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAI 85 (433)
Q Consensus 8 ~~~~~~l~~~Dpei~~~i~~e~~rq~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~ 85 (433)
=+|.+.+....+-...-|-+...++++.|+|--.+. .+++.+++++...+.. |. ..|+-.+-..++-+-..
T Consensus 7 ~~~a~r~~~~~~s~irel~~~~~~~~dvI~l~~G~pd~~~p~~i~~a~~~~l~~----~~---~~Y~~~~G~~~LReaia 79 (390)
T PRK08361 7 YFMAGRINLIQRSKIRELFERASKMENVISLGIGEPDFDTPKNIKEAAKRALDE----GW---THYTPNAGIPELREAIA 79 (390)
T ss_pred CHHHHHHHCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHC----CC---CCCCCCCCCHHHHHHHH
T ss_conf 499899724998879999997737999389989989998789999999999846----88---88899888799999999
Q ss_pred HHHHHHCCCC--CEECCCHHHH-HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCC
Q ss_conf 9999871886--3010000167-9999999983154874881233448411147665433333220136658323-5659
Q gi|254780349|r 86 ERAKKLFNVN--FVNVQSHSGS-QMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-GLLD 161 (433)
Q Consensus 86 ~~a~~lF~a~--~anvqp~SG~-~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~~ID 161 (433)
+..++.+|.+ .-||-..+|+ .|...++.++++|||+|+..+...-++.. .....| -+.+.+++++++ ..+|
T Consensus 80 ~~~~~~~g~~v~~d~I~vt~G~~~al~~~~~~l~~pGD~Vli~~P~Y~~y~~---~~~~~g--~~~~~vpl~~~~~~~~d 154 (390)
T PRK08361 80 EYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEQGDEVIIPDPAFVCYVE---DAKIAE--AKPIRIPLREENNFQPD 154 (390)
T ss_pred HHHHHHHCCCCCHHEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHH---HHHHCC--CEEEEEECCCCCCCCCC
T ss_conf 9999987889882329987789999999999965999989984760777999---999829--97999971587898779
Q ss_pred HHHHHHHHHHHCCCEEEEECCCCC--C---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCC-CCC---CEEEE
Q ss_conf 899999998604667897055243--5---36379999886417978991862012443200012322-002---35674
Q gi|254780349|r 162 MHEIESLAIEYNPKLIIVGGTAYS--R---VWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPV-PHC---HIVTT 232 (433)
Q Consensus 162 ~d~~~~~a~~~kPklIi~G~S~y~--~---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl-~~A---Dvvt~ 232 (433)
.|++++.+. .+.|+|++.....| . .-.++++.++|.+.+.+++.|..|- .|+-.+.-+.|+ ..+ -|+.+
T Consensus 155 ~~~l~~~~~-~~~k~ivl~~P~NPTG~v~s~e~l~~l~~la~~~~i~ii~DE~Y~-~l~~~~~~~~~~~~~~~~~~i~~~ 232 (390)
T PRK08361 155 PDELLEAIT-KRTRMIVINYPNNPTGAVLDKETAKAIADIAEDYNIYILSDEPYE-HFLYEDAKHYPMIKFAPDNTILAN 232 (390)
T ss_pred HHHHHHHCC-CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCHHHHH-HHHCCCCCCCCHHHHCCCCEEEEE
T ss_conf 999997365-467599988998975778667888899999986395534706568-760388754201131355289980
Q ss_pred CCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 045652--256744898336205650166465432234455666899999999735-64899999999888999999861
Q gi|254780349|r 233 TTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALS-SEFRDYAKQIVLNSQALAKKLQF 309 (433)
Q Consensus 233 sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~-~~f~~Ya~qvv~NA~~La~~L~~ 309 (433)
|.-|+| +|=|-|.+.+.++ +.+++.+.--....+.+.+.++|+. .++.+... .......+..-+|.+.+.+.|.+
T Consensus 233 S~SK~~~~~G~RiG~~v~~~~-~i~~~~~~~~~~~~~~~~~~q~a~~-~al~~~~~~~~~~~~~~~~~~rr~~~~~~l~~ 310 (390)
T PRK08361 233 SFSKTFAMTGWRLGFVIAPTQ-VIREMIKLHAYVIGNVASFVQIAGI-EALRSKESWKAVEEMRKEYNERRKLVLKRLNK 310 (390)
T ss_pred CCHHHCCCCCCCEEEEEECHH-HHHHHHHHHHHCCCCCCHHHHHHHH-HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 252414787423799983899-9999999976602787689999999-99848504899999999999999999999985
Q ss_pred C-CCCCCCCCCCCCEEEECCCCCCCCHHHHHH-HHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHH
Q ss_conf 6-852334588898126316655676799999-88856718803789989999888985122466673079998999999
Q gi|254780349|r 310 L-GFDIVSGGTDNHLMLVDLRSKRMTGKRAES-ILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYI 387 (433)
Q Consensus 310 ~-G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~-~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~i 387 (433)
. |+.+.. ..-.-.+|+|++..+++..+..+ .++++||.+. ||..=...-+.-+||.-. ..++++.+-
T Consensus 311 ~~g~~~~~-P~gg~~lw~~l~~~~~~~~~~~~~ll~~~gV~v~----PG~~Fg~~g~~~iRl~f~------~~~e~l~ea 379 (390)
T PRK08361 311 MPHITVFE-PKGAFYVFPKIDETDMSSEDFSEWLLEKARVVVI----PGTAFGKMGEGYVRISYA------TSKEKLIEA 379 (390)
T ss_pred CCCCEECC-CCEEEEEEEECCCCCCCHHHHHHHHHHHCCEEEE----CCHHHCCCCCCEEEEEEC------CCHHHHHHH
T ss_conf 89968668-8866699788888898999999999971999998----873228899997999972------999999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999960
Q gi|254780349|r 388 GELIAQILD 396 (433)
Q Consensus 388 A~li~~~L~ 396 (433)
.+-|.++|+
T Consensus 380 l~Rl~~al~ 388 (390)
T PRK08361 380 MERMEKALS 388 (390)
T ss_pred HHHHHHHHH
T ss_conf 999999997
No 62
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.71 E-value=5.2e-15 Score=125.00 Aligned_cols=327 Identities=19% Similarity=0.262 Sum_probs=222.3
Q ss_pred HHHHCCCCCC--CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH----HHHHHHHCCCCCEECCCHHH
Q ss_conf 9983888104--30102989999830510288657988875336006799999999----99999871886301000016
Q gi|254780349|r 31 RQNDEIQLIA--SENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIA----IERAKKLFNVNFVNVQSHSG 104 (433)
Q Consensus 31 rq~~~l~LiA--SEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la----~~~a~~lF~a~~anvqp~SG 104 (433)
+.++.|||-| .-..+.|.+++++-+ |..||.---|-.| ..|+|+.=- .+.+.+..|+++| |+..|
T Consensus 15 ~~~~~in~~piq~gg~lt~ea~ka~~~-----~gdgysvcd~C~~--~LD~i~~Ppi~~f~~~la~flg~D~~--rlvnG 85 (386)
T PRK09331 15 LEEEMINLDPIQRGGRLTPEARKALIE-----YGDGYSVCDYCKG--RLDKIEKPPIADFHEDLAKFLGMDEA--RVTPG 85 (386)
T ss_pred HHHCCCCCCHHHHCCCCCHHHHHHHHH-----HCCCCCHHHHHCC--HHHCCCCCCHHHHHHHHHHHHCCCEE--EECCC
T ss_conf 023133567355269689999999999-----7488736645411--01125599889999999998499637--85288
Q ss_pred HH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH----HHHHHHHHHH--CCCEE
Q ss_conf 79-99999998315487488123344841114766543333322013665832356598----9999999860--46678
Q gi|254780349|r 105 SQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDM----HEIESLAIEY--NPKLI 177 (433)
Q Consensus 105 ~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~----d~~~~~a~~~--kPklI 177 (433)
+. +.+|+.+|+++|||+|+.... -|.|-=..+..+|.....++...+++ ..|.. +.+++..+++ .|+|+
T Consensus 86 ar~g~qAv~~a~c~~GD~VIl~rn---aHyS~~~A~elaG~~~~~v~~~~~~~-~~I~~~~~~~~Iee~~~e~gk~~aL~ 161 (386)
T PRK09331 86 AREGKFAVMHALCKKGDYVVLDGL---AHYTSYVAAERAGLNVREVPKTGYPD-YRITPEAYAEKIEEVEDETGKPPALA 161 (386)
T ss_pred CCHHHHHHHHHHHCCCCEEEECCC---CHHHHHHHHHHCCCEEEEECCCCCCC-CCCCHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 427899999986369997984484---05999999997598589936877723-45080057999999998618985599
Q ss_pred EEECCC--CCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCC-CCCCC-CCEEEECCCCCCCCC-CCEEEEECCCC
Q ss_conf 970552--43536379999886417978991862012443200012-32200-235674045652256-74489833620
Q gi|254780349|r 178 IVGGTA--YSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHP-SPVPH-CHIVTTTTHKSLRGP-RGGLIMTNHAD 252 (433)
Q Consensus 178 i~G~S~--y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~-~Pl~~-ADvvt~sTHKtl~GP-rgGiI~~~~~e 252 (433)
++-... |.-..|++++.+||++.|..+++|.||..|. +| |-.+- ||++.+|||||...+ +.|++..++ +
T Consensus 162 llt~pdy~yGn~~d~~~i~~iah~~~ip~lvdeA~~~~~-----~P~~a~~~GaD~~v~S~HK~~~s~t~sgvL~~~~-e 235 (386)
T PRK09331 162 LLTHVDGNYGNLHDAKKIAKVAHQYGIPLLLNGAYTVGR-----MPVDGKELGADFIVGSGHKSMAASAPSGVLATTE-E 235 (386)
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCC-----CCCCHHHCCCCEEEEECCCCCCCCCCCEEEECCC-C
T ss_conf 996888664454638999999987498189814433577-----8974666399889863454442346312443045-3
Q ss_pred HHHHCCHH--HCH---------HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCC
Q ss_conf 56501664--654---------32234455666899999999735648999999998889999998616-8523345888
Q gi|254780349|r 253 LAKKINSA--IFP---------GLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVSGGTD 320 (433)
Q Consensus 253 ~~~~i~~a--vfP---------g~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd 320 (433)
+.+++-+. .|+ ...|+|..--||++-++-+... .| .+-|++||..-++|..- |+..++..--
T Consensus 236 ~~d~v~R~s~~~~~Kev~mLgcTs~g~psy~LMASfd~vrerv~--~~----d~ev~~ar~~~~El~kIeG~~~lge~P~ 309 (386)
T PRK09331 236 YADKVFRTSKKFGVKEVELLGCTLRGAPLVTLMASFPHVKERVK--NW----DEEVEKARWFVDELEKIEGFKQLGEKPR 309 (386)
T ss_pred HHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHH--HH----HHHHHHHHHHHHHHHCCCCHHHCCCCCC
T ss_conf 01556522643057899885363346408999806599999998--77----8999999999999860876554065778
Q ss_pred CCEEE-EC-------CCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 98126-31-------66556767999998885671880378998999988898512246667307999899999999999
Q gi|254780349|r 321 NHLML-VD-------LRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIA 392 (433)
Q Consensus 321 ~H~vl-vd-------l~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~ 392 (433)
+|-+. .| .+..+.+|...++.|.+-||..-+. +-+ .-+ .+.+.|+.+++++.+.+-+.
T Consensus 310 ~hdl~~fdtt~~~~ia~~~~~~Gy~l~~~Lk~r~I~ge~s---g~t------~~l-----kl~s~G~t~E~v~~li~A~k 375 (386)
T PRK09331 310 NHDLMRFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIKP---GLT------KEF-----KLSTYGLTWEQVEYVADSFK 375 (386)
T ss_pred CCCCEEECCCCEEEEHHHCCCCCEEHHHHHHHCCCEEEEC---CCC------EEE-----EEEECCCCHHHHHHHHHHHH
T ss_conf 7774353376412223204866056799997679649955---710------178-----78861787899999999999
Q ss_pred HHHH
Q ss_conf 9960
Q gi|254780349|r 393 QILD 396 (433)
Q Consensus 393 ~~L~ 396 (433)
++.+
T Consensus 376 eIae 379 (386)
T PRK09331 376 EIAE 379 (386)
T ss_pred HHHH
T ss_conf 9999
No 63
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.71 E-value=4e-14 Score=118.84 Aligned_cols=297 Identities=19% Similarity=0.210 Sum_probs=192.1
Q ss_pred HHHHHHHHHHHHHHHCC--CCCEECCCHHH-HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999999998718--86301000016-7999999998315487488123344841114766543333322013665
Q gi|254780349|r 77 VDDIENIAIERAKKLFN--VNFVNVQSHSG-SQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNV 153 (433)
Q Consensus 77 ~d~iE~la~~~a~~lF~--a~~anvqp~SG-~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~ 153 (433)
..++.+...+...+-++ .+.-+|-..+| +.|...++.++++|||+|+..++..+++.... .....+.+.++.
T Consensus 38 ~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~-----~~~g~~~~~v~~ 112 (350)
T cd00609 38 LPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAA-----RLAGAEVVPVPL 112 (350)
T ss_pred CHHHHHHHHHHHHHHHCCCCCHHHEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH-----HHCCCCCCCCCC
T ss_conf 199999999998787389974797899269999999999998089898999479863069999-----982994125565
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCC---CHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCC-
Q ss_conf 83235659899999998604667897055243--536---379999886417978991862012443200012322002-
Q gi|254780349|r 154 RKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVW---DWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHC- 227 (433)
Q Consensus 154 d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~---d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~A- 227 (433)
+++....+-.+.++.+...++|+|++-....| ..+ +++++.++|.+.+.+++.|.++. .|+-.+..+.++...
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~ 191 (350)
T cd00609 113 DEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYA-ELVYDGEPPPALALLD 191 (350)
T ss_pred CCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCH-HHCCCCCCCCHHHHCC
T ss_conf 600386766899998568899789856994972546337889899999862386268853412-2036998889678557
Q ss_pred ----CEEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf ----35674045652--256744898336205650166465432234455666899999999735648999999998889
Q gi|254780349|r 228 ----HIVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQ 301 (433)
Q Consensus 228 ----Dvvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~ 301 (433)
-|+..|.-|+| +|-|-|.+++.++.+.+++.... +....++-.-...+.+.++.. .....++..+++.+|.+
T Consensus 192 ~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~ 269 (350)
T cd00609 192 AYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLL-PYTTSGPSTLSQAAAAAALDD-GEEHLEELRERYRRRRD 269 (350)
T ss_pred CCCEEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHH
T ss_conf 7980899911723037945377999988899999998624-214678987999999999868-29999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCH
Q ss_conf 99999861685233458889812631665567679999988856718803789989999888985122466673079998
Q gi|254780349|r 302 ALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKE 381 (433)
Q Consensus 302 ~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e 381 (433)
.|.+.|.+.+...+......-.+|+++.. ..+...+.+.|.+.||.+.. +..-.+..+..+||+... .+
T Consensus 270 ~l~~~l~~~~~~~~~~p~~g~f~~~~~~~-~~~~~~~~~~l~~~gv~v~~----g~~f~~~~~~~iRl~~~~------~~ 338 (350)
T cd00609 270 ALLEALKELGPLVVVKPSGGFFLWLDLPE-GDDEEFLERLLLEAGVVVRP----GSAFGEGGEGFVRLSFAT------PE 338 (350)
T ss_pred HHHHHHHHCCCCEEECCCCCEEEEEECCC-CCHHHHHHHHHHHCCEEEEE----CHHHCCCCCCEEEEEECC------CH
T ss_conf 99999985799612079955399898999-98299999999979999992----456488998979999639------89
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254780349|r 382 KDFEYIGELIA 392 (433)
Q Consensus 382 ~em~~iA~li~ 392 (433)
+++++..+.|.
T Consensus 339 ~~~~~~~~rl~ 349 (350)
T cd00609 339 EELEEALERLA 349 (350)
T ss_pred HHHHHHHHHHC
T ss_conf 99999999857
No 64
>PRK08960 hypothetical protein; Provisional
Probab=99.70 E-value=1.6e-13 Score=114.65 Aligned_cols=361 Identities=14% Similarity=0.086 Sum_probs=217.3
Q ss_pred HHHHHHHHCH-HHHHHHHHHHHHH---HHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 7646978589-9999999999999---83888104301--0298999983051028865798887533600679999999
Q gi|254780349|r 10 FQQSLIESDP-DVFSLIGQESCRQ---NDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENI 83 (433)
Q Consensus 10 ~~~~l~~~Dp-ei~~~i~~e~~rq---~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~l 83 (433)
|.+-++..-| .+.++.+.-.+.+ ++-|+|-..+- .+.+.+.++.-..+..- . --|.-.+-..++-+-
T Consensus 5 ~s~r~~~i~~s~~~~i~~~a~~~~~~G~~vi~l~~G~pdf~~p~~i~~a~~~a~~~~----~---~~Y~~~~G~~~LRea 77 (387)
T PRK08960 5 YSRRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEPDFTTAAPIVAAGQAALAAG----H---TRYTAARGLPALREA 77 (387)
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCC----C---CCCCCCCCHHHHHHH
T ss_conf 889984499679999999999999779980788994899988999999999998538----9---988998772999999
Q ss_pred HHHHHHHHCCCC--CEECCCHHH-HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CC
Q ss_conf 999999871886--301000016-79999999983154874881233448411147665433333220136658323-56
Q gi|254780349|r 84 AIERAKKLFNVN--FVNVQSHSG-SQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-GL 159 (433)
Q Consensus 84 a~~~a~~lF~a~--~anvqp~SG-~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~~ 159 (433)
..+..++-||.+ .-||=..+| +.|...++.++++|||.|+..+...-++.. .....+. ..+.+++++++ ..
T Consensus 78 ia~~~~~~~g~~~~~d~I~vt~G~~~al~~~~~~l~~pGD~Vlv~~P~Yp~~~~---~~~~~~~--~~~~vp~~~~~~~~ 152 (387)
T PRK08960 78 IAGFYAQRYGLDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRH---FLRLVEG--AAQLVPVGPDTRYQ 152 (387)
T ss_pred HHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH---HHHHHCC--EEEEEECCCCCCCC
T ss_conf 999999985899984328980866999999999956999879981787655289---9998537--44999757544778
Q ss_pred CCHHHHHHHHHHHCCCEEEEECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCC--EEEE
Q ss_conf 59899999998604667897055243-----5363799998864179789918620124432000123220023--5674
Q gi|254780349|r 160 LDMHEIESLAIEYNPKLIIVGGTAYS-----RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCH--IVTT 232 (433)
Q Consensus 160 ID~d~~~~~a~~~kPklIi~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~AD--vvt~ 232 (433)
+|.|.+++.+. .+++++++-....| -.-.++++.++|.+.+.+++.|..+ ..|+-++..++++...| ++.+
T Consensus 153 ~~~~~le~~~~-~~~~~iil~nP~NPTG~v~s~~~l~~l~~~a~~~~~~vI~DEiY-~~l~~~~~~~s~~~~~~~~i~i~ 230 (387)
T PRK08960 153 LTPALVERHWD-SDSVGALVASPANPTGTLLSRDELAALSQALKARGGHLVVDEIY-HGLTYGVDAASVLEVDDSAFVLN 230 (387)
T ss_pred CCHHHHHHHCC-CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC-HHHCCCCCCCCCCCCCCCEEEEE
T ss_conf 89999997278-78729997689898863146899999999876239779984461-44125898653113678779995
Q ss_pred CCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 045652--256744898336205650166465432234455666899999999735648999999998889999998616
Q gi|254780349|r 233 TTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL 310 (433)
Q Consensus 233 sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~ 310 (433)
|.-|+| +|=|-|.+++.+ ++.+++.+..--...+.+.+.+.|+.+. +........+...+..-++...|.+.|.+.
T Consensus 231 S~SK~~~~~G~RiG~~v~p~-~~i~~~~~~~~~~~~~~~~~~Q~aa~~a-l~~~~~~~~~~~~~~~~~rrd~l~~~l~~~ 308 (387)
T PRK08960 231 SFSKYFGMTGWRLGWLVAPP-AAVPELEKLAQNLYISASSMAQHAALAC-FEPETIAILEARRAEFQRRRDFLLPALREL 308 (387)
T ss_pred ECCCCCCCCCCEEEEEEECH-HHHHHHHHHHHHCCCCCCCHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 06432557763058999889-9999999999854377987999999999-621559999999999999999999999975
Q ss_pred CCCCCCCCCCCCEEEECCCCCCCCHHHH-HHHHHHCCEEEECCCCCCCCCCCCCCC-CCCCCCHHHHHCCCCHHHHHHHH
Q ss_conf 8523345888981263166556767999-998885671880378998999988898-51224666730799989999999
Q gi|254780349|r 311 GFDIVSGGTDNHLMLVDLRSKRMTGKRA-ESILGRVSITCNKNSIPFDPESPFITS-GIRLGTPSGTTRGFKEKDFEYIG 388 (433)
Q Consensus 311 G~~vv~ggTd~H~vlvdl~~~~~~G~~a-~~~Le~~gI~~Nkn~iP~D~~~~~~~s-GiRlGT~aiTtrG~~e~em~~iA 388 (433)
|+.+..-..-.-.+|+|++..+.+..+. ...|++.|+.+. ||..=.+..+. -+||.-. ..++++++-.
T Consensus 309 ~~~~~~~P~G~~y~w~~~~~~~~d~~~~~~~ll~~~gV~v~----PG~~Fg~~~~~~~~Rls~~------~~~~~l~eal 378 (387)
T PRK08960 309 GFGIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEHVAFT----PGLDFGRHQAGHHVRFAYT------QSLPRLQEAV 378 (387)
T ss_pred CCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCEEEE----CCHHHCCCCCCCEEEEEEC------CCHHHHHHHH
T ss_conf 99604589866699788888899999999999986999997----4722089999998999976------9999999999
Q ss_pred HHHHHHHH
Q ss_conf 99999960
Q gi|254780349|r 389 ELIAQILD 396 (433)
Q Consensus 389 ~li~~~L~ 396 (433)
+-|.++|+
T Consensus 379 ~RL~~~Lk 386 (387)
T PRK08960 379 ERIARGLR 386 (387)
T ss_pred HHHHHHHC
T ss_conf 99999966
No 65
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.70 E-value=1.2e-15 Score=129.41 Aligned_cols=247 Identities=20% Similarity=0.243 Sum_probs=168.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC-CCCCCC
Q ss_conf 6006799999999999998718863010000167999999998315487488123344841114766543333-322013
Q gi|254780349|r 72 GGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGK-WFKAIP 150 (433)
Q Consensus 72 ~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~-~~~~~~ 150 (433)
.|+--.+.+| ++..+|-|++.+-+- -||+.|-.++++++++|||+|+..+--.||-... .-.+..+ +.+...
T Consensus 57 ~gNPT~~~lE----~~lA~LEgg~~a~~~-sSGmaAi~~~l~~ll~~GDhiv~~~~~YGgT~~l--~~~~~~~~gi~~~~ 129 (405)
T PRK08776 57 SGNPTRDLLG----EALAELEGGAGGVIT-STGMGAINLVLNALLQPGDTLVVPHDAYGGSWRL--FNALAKKGHFALIT 129 (405)
T ss_pred CCCHHHHHHH----HHHHHHHCCCCEEEE-CCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH--HHHHHHHCCEEEEE
T ss_conf 9887899999----999998299968994-6799999999999738999899868861179999--99987548889999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-C
Q ss_conf 66583235659899999998604667897055243--53637999988641797899186201244320001232200-2
Q gi|254780349|r 151 YNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-C 227 (433)
Q Consensus 151 y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-A 227 (433)
+ |. -|.+.+++.+ ..++|+|++..-..| ...|++++.++|++.|+++++|.. .+...+++|+++ |
T Consensus 130 v--d~----~d~~~~~~~i-~~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNT-----fatP~~~~Pl~~Ga 197 (405)
T PRK08776 130 A--DL----TDPRSLADAL-AQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNT-----FLSPALQKPLEFGA 197 (405)
T ss_pred E--CC----CCHHHHHHHC-CCCCEEEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECC-----CCCCCCCCHHHHCC
T ss_conf 6--89----9989999743-77765999988999988602759999999873997999799-----76400268265279
Q ss_pred CEEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHH-CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Q ss_conf 356740456522567---4489833620565016646-543223445566689999999973564899999999888999
Q gi|254780349|r 228 HIVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAI-FPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQAL 303 (433)
Q Consensus 228 Dvvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~av-fPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~L 303 (433)
|||..|+.|-+.|.- ||.+.++++++++++.... --|...+|+..- ++ ++- ++ -...-.++-.+||.++
T Consensus 198 DivihS~TKyl~GHsDvl~G~vv~~~~~~~~~l~~~~~~~G~~~sP~da~---L~--lRG-Lk-TL~lRm~r~~~nA~~l 270 (405)
T PRK08776 198 DLVLHSTTKYINGHSDVVGGAVVARDAALHQQLVWWANALGLTGSPFDAF---LT--LRG-LR-TLDARLRVHQENADAI 270 (405)
T ss_pred CEEEEECCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHH---HH--HCC-CC-CHHHHHHHHHHHHHHH
T ss_conf 78999726043278653056222688899999999998608888833578---88--645-78-8999999999999999
Q ss_pred HHHHHHCCC--CCCCCCCCCC---------------EEEECCCCCCCCHHH-HHHHHHHCCEE
Q ss_conf 999861685--2334588898---------------126316655676799-99988856718
Q gi|254780349|r 304 AKKLQFLGF--DIVSGGTDNH---------------LMLVDLRSKRMTGKR-AESILGRVSIT 348 (433)
Q Consensus 304 a~~L~~~G~--~vv~ggTd~H---------------~vlvdl~~~~~~G~~-a~~~Le~~gI~ 348 (433)
|+.|.++.- +|..-|-.+| ++-++++. |.+ +.+.++...+.
T Consensus 271 A~~L~~hp~V~~V~YPgL~shp~h~la~r~~~G~Ggm~Sf~l~~----~~~~~~~f~d~l~lf 329 (405)
T PRK08776 271 AALLDGHAAVNQVYFPGLASHPGHALAARQQKGFGAMLSFELEG----GEAAVRAFVDGLRYF 329 (405)
T ss_pred HHHHHHCCCCCEEECCCCCCCCCHHHHHHCCCCCCCEEEEEECC----HHHHHHHHHHHCCCC
T ss_conf 99997098968688988889816789986489986526888457----399999999808836
No 66
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.70 E-value=1.9e-14 Score=121.16 Aligned_cols=311 Identities=22% Similarity=0.247 Sum_probs=211.9
Q ss_pred CCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHC
Q ss_conf 43010--2989999830510288657988875336006799999999999998718863010000167999999998315
Q gi|254780349|r 40 ASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMH 117 (433)
Q Consensus 40 ASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~ 117 (433)
+|.|+ .+|.+++++...=. -+..-||--+++.++| ++++++|+.. +-+=..||++||..++.+.++
T Consensus 5 ~SDn~~g~~~~m~eam~~a~~-------~~~~~YG~D~~~~~~e----~~~ae~~g~~-a~~Fv~sGT~aN~lal~~~~~ 72 (342)
T COG2008 5 RSDNVAGPTPEMREALAAANA-------VGDDVYGEDPTTNALE----QRIAELFGKE-AALFVPSGTQANQLALAAHCQ 72 (342)
T ss_pred CCCCCCCCCHHHHHHHHHCCC-------CCCCCCCCCHHHHHHH----HHHHHHHCCC-EEEEECCCCHHHHHHHHHHCC
T ss_conf 557667879999999985524-------5787778888999999----9999985774-499926843888999998648
Q ss_pred CCCEEEECCCCCCCCCC-C--CCCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHH------HCCCEEEE-----ECC
Q ss_conf 48748812334484111-4--76654333332201366583-2356598999999986------04667897-----055
Q gi|254780349|r 118 PGDSFMGLSLDSGGHLT-H--GSSVNMSGKWFKAIPYNVRK-EDGLLDMHEIESLAIE------YNPKLIIV-----GGT 182 (433)
Q Consensus 118 pGD~Il~~~l~~GGHls-h--g~~~~~~g~~~~~~~y~~d~-~~~~ID~d~~~~~a~~------~kPklIi~-----G~S 182 (433)
||+.|+.-. .+|+. | |.+.-++ ...+..+++ .++.++.|.++.-++. .+|++++. +++
T Consensus 73 ~~~~vi~~~---~aHi~~~E~Ga~~~~~----~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~Gt 145 (342)
T COG2008 73 PGESVICHE---TAHIYTDECGAPEFFG----GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGT 145 (342)
T ss_pred CCCEEEEEC---CCCCEECCCCCHHHHC----CCCEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCE
T ss_conf 997699852---5312023567588873----885430479877873999999763677765588750798613677866
Q ss_pred CCCCCCCHHHHHHHHHHCCCEEEECCCCHH-HHHHHHCCCCCC---CCCCEEEECCCCCCCCCCCEEEEECCCCHHHHCC
Q ss_conf 243536379999886417978991862012-443200012322---0023567404565225674489833620565016
Q gi|254780349|r 183 AYSRVWDWERFRSIADSIGAYLMADISHIS-GLVVGGQHPSPV---PHCHIVTTTTHKSLRGPRGGLIMTNHADLAKKIN 258 (433)
Q Consensus 183 ~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~-GLIa~g~~~~Pl---~~ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~ 258 (433)
+||.. .+++++++|++.|-.|+.|+|-+. .+++-| ++-- .++|+++..-.|.+..|-|.+++.|. ++.++..
T Consensus 146 Vy~l~-el~~i~~~~k~~~l~LHmDGAR~~nA~valg--~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~-~~~~~a~ 221 (342)
T COG2008 146 VYPLD-ELEAISAVCKEHGLPLHMDGARLANALVALG--VALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNR-DFAKRAR 221 (342)
T ss_pred ECCHH-HHHHHHHHHHHHCCCEEECHHHHHHHHHHCC--CCHHHHHHHCCEEEEECCCCCCCEEEEEEECCH-HHHHHHH
T ss_conf 64899-9999999999809954404088988998739--888998742889999131477521325897389-9999989
Q ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH--HHHHHHHHHH-CCCCCCCCCCCCCEEEECCCCCCCCH
Q ss_conf 64654322344556668999999997356489999999988--8999999861-68523345888981263166556767
Q gi|254780349|r 259 SAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLN--SQALAKKLQF-LGFDIVSGGTDNHLMLVDLRSKRMTG 335 (433)
Q Consensus 259 ~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~N--A~~La~~L~~-~G~~vv~ggTd~H~vlvdl~~~~~~G 335 (433)
.-. -+-|-.+.+.-=+|.++..+++.. -.+.+..=+| |+.|++.|.+ .|+++..- +++.+|++++.+.
T Consensus 222 ~~r---K~~Ggl~~k~r~laA~~~~~l~~~-~~~~~~~Han~mA~~La~~~~~~~G~~~~~~-~~tN~vf~~l~~~---- 292 (342)
T COG2008 222 RWR---KRAGGLMRKARFLAAQGLYALEDD-VWRLAADHANAMAARLAEGLEAKPGVKLAFP-VETNMVFVRLPES---- 292 (342)
T ss_pred HHH---HHHCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHCCCCEECCC-CCCCEEEEECCHH----
T ss_conf 999---986562766548999999997315-8888878889999999976532689434367-7662799977767----
Q ss_pred HHHHHHHHHCCEEEECCCCCCCCCCCCCCCC--CCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 9999988856718803789989999888985--12246667307999899999999999996
Q gi|254780349|r 336 KRAESILGRVSITCNKNSIPFDPESPFITSG--IRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 336 ~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sG--iRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
+.+.|...++.-+.+..- .+.| +|+=|..-|+ ++|..++...|..++
T Consensus 293 --~i~~l~~~~~~~~~~~~~-------~~~~~~vRfvts~a~~----~edv~~~~~~~~~~~ 341 (342)
T COG2008 293 --AIEALRLAGALFYRGVLI-------GAHGEIVRFVTSWATS----EEDVDELVAAIKALL 341 (342)
T ss_pred --HHHHHHHHCHHHEEEEEC-------CCCCCEEEEEEECCCC----HHHHHHHHHHHHHHH
T ss_conf --889997515212001221-------5777558998502499----999999999999964
No 67
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=1.6e-13 Score=114.70 Aligned_cols=317 Identities=16% Similarity=0.138 Sum_probs=208.6
Q ss_pred HHCCCCCCCCCC--CCHHHHHHHHCCCC----CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC-CEECCCHHHH
Q ss_conf 838881043010--29899998305102----8865798887533600679999999999999871886-3010000167
Q gi|254780349|r 33 NDEIQLIASENI--VSRAVLEAQGSILT----NKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVN-FVNVQSHSGS 105 (433)
Q Consensus 33 ~~~l~LiASEN~--~S~~v~~~l~S~l~----nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~-~anvqp~SG~ 105 (433)
...|-|-+.||. +||.|.+++...+. |||-+ . ++.+- ++...+.+|.. -.||=..+|+
T Consensus 26 ~~~ikL~~NEnp~g~~~~v~~ai~~~~~~~~lnrYPd----~------~~~~L-----r~~lA~~~gv~~~~~Ii~GnGS 90 (356)
T PRK04870 26 AGFVKLDAMENPYPLPAELQAELGERLAEVALNRYPD----P------RAAAL-----KAALRAAMGVPAGADVLLGNGS 90 (356)
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCC----C------CHHHH-----HHHHHHHHCCCCCCEEEECCCH
T ss_conf 9988832788999989999999999751224377989----9------89999-----9999998687987769981679
Q ss_pred HH-HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 99-99999983154874881233448411147665433333220136658323565989999999860466789705524
Q gi|254780349|r 106 QM-NQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAY 184 (433)
Q Consensus 106 ~A-n~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y 184 (433)
.- -..++.++++|||+|+......+.+- ......|. +.+.+++++ +..+|.+++.+.+.+++||||++.....
T Consensus 91 dElI~~i~~~~~~pgd~vl~~~Ptf~~Y~---~~a~~~g~--~~~~vpl~~-d~~~d~~~~~~~i~~~~~klv~i~nPNN 164 (356)
T PRK04870 91 DELIQLIALACAKPGAKVLAPVPGFVMYR---MSAKFAGL--EFVGVPLTA-DFTLDLPAMLAAIAEHRPALVYLAYPNN 164 (356)
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCHHHHH---HHHHHCCC--EEEEEECCC-CCCCCHHHHHHHHCCCCCCEEEECCCCC
T ss_conf 99999999998189898997677766899---99998298--799984687-6562128899874146873899768999
Q ss_pred C--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCE-EEECCCC-CCCCCCCEEEEECCCCHHHHCCHH
Q ss_conf 3--53637999988641797899186201244320001232200235-6740456-522567448983362056501664
Q gi|254780349|r 185 S--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHI-VTTTTHK-SLRGPRGGLIMTNHADLAKKINSA 260 (433)
Q Consensus 185 ~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADv-vt~sTHK-tl~GPrgGiI~~~~~e~~~~i~~a 260 (433)
| ..++-+++.+++++.++++++|.|=+ -+.--...+.--++-++ |+-|.-| .|+|-|-|..+++. ++.+++++.
T Consensus 165 PTG~~~~~~~l~~l~~~~~~lvVvDEAY~-eF~~~s~~~~~~~~~nlivlRTfSK~glaGlRvGy~ia~~-~~i~~l~k~ 242 (356)
T PRK04870 165 PTGNLFDDADVEAIIAAAPGLVVIDEAYQ-PFAGRSWLPRAAEFPNVLVMRTVSKLGLAGLRLGYLAGHP-AWIAELDKV 242 (356)
T ss_pred CCCCCCCHHHHHHHHHCCCCEEEEECCCH-HHCCCCCCHHHHCCCCEEEEECCCCCCCCCCCEEEEEECH-HHHHHHHHH
T ss_conf 76633687889999850698655225407-5567862101203796899860541013656627775099-999999773
Q ss_pred HCHHHHHHHHHHHHHHHHH-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCEEEECCCCCCCCHHHH
Q ss_conf 6543223445566689999-9999735648999999998889999998616-8523345888981263166556767999
Q gi|254780349|r 261 IFPGLQGGPFMHSIAAKAV-AFGEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHLMLVDLRSKRMTGKRA 338 (433)
Q Consensus 261 vfPg~qg~~~~~~iaa~av-al~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~vlvdl~~~~~~G~~a 338 (433)
.-|.-+ |.+|..+. +..+ -...+....+++.+.-+.|.+.|.+. |+.+.. +++.-+|+++. ++...
T Consensus 243 ~~p~~v-----n~~a~~aa~~aL~-d~~~~~~~~~~~~~~R~~l~~~L~~l~g~~v~p--S~aNFil~~~~----~a~~l 310 (356)
T PRK04870 243 RPPYNV-----NVLTQATALFALE-HVDVLDAQAAELRAERTRLAAALAALPGVTVFP--SAANFILVRVP----DAAAV 310 (356)
T ss_pred CCCCCC-----HHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC--CCCEEEEEECC----CHHHH
T ss_conf 489873-----3999999999974-958899999999999999999998369978889--98808999889----99999
Q ss_pred HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 998885671880378998999988898512246667307999899999999999996
Q gi|254780349|r 339 ESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 339 ~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
.+.|.+.||.|-... .-.|..++-||+.. -.++||+.+-+-+.++|
T Consensus 311 ~~~L~~~gIlVR~~~----~~~~~~~~~lRIsi-------gt~een~~ll~aLk~~L 356 (356)
T PRK04870 311 FDGLKTRRVLVKNVS----GMHPLLANCLRVTV-------GSPEENAQFLAALKLAL 356 (356)
T ss_pred HHHHHHCCEEEEECC----CCCCCCCCEEEEEC-------CCHHHHHHHHHHHHHHC
T ss_conf 999996990999889----88888999899983-------99999999999999859
No 68
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.69 E-value=1.1e-13 Score=115.68 Aligned_cols=354 Identities=17% Similarity=0.126 Sum_probs=215.5
Q ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 7646978589999999999999983888104301--02989999830510288657988875336006799999999999
Q gi|254780349|r 10 FQQSLIESDPDVFSLIGQESCRQNDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIER 87 (433)
Q Consensus 10 ~~~~l~~~Dpei~~~i~~e~~rq~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~ 87 (433)
|.+.+...++.+...+.+=.....+.|+|=-.|. .+++.+++++.-.+.+....+| +-.+-..++-+-..+.
T Consensus 4 ~a~r~~~~~~~~~~~~~~l~~~~~~iI~l~~G~pd~~~p~~v~~a~~~al~~~~~~~Y------~~~~G~~~LR~aia~~ 77 (389)
T PRK05957 4 PTSRMDAVQSPIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANPENHLY------QSVQGIPPLLEAITQK 77 (389)
T ss_pred HHHHHHCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCC------CCCCCHHHHHHHHHHH
T ss_conf 5766404899899999999975999388999899999889999999999828678868------9975749999999999
Q ss_pred HHHHCCCCC--EE-CCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 998718863--01-00001679-999999983154874881233448411147665433333220136658323565989
Q gi|254780349|r 88 AKKLFNVNF--VN-VQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMH 163 (433)
Q Consensus 88 a~~lF~a~~--an-vqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d 163 (433)
.++-+|.+. .| |-..+|++ |...++.+|++|||+|+..+...-++.. .....| -+.+.++.| +++.+|.|
T Consensus 78 ~~~~~g~~~~~~~~I~vt~Ga~~al~~~~~al~~pGD~Vlv~~P~Y~~~~~---~~~~~g--~~~v~vp~d-~~~~~~~~ 151 (389)
T PRK05957 78 LQADNGIEINNENAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEM---AITMAG--CQPVLVPTD-ENYQLRPE 151 (389)
T ss_pred HHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHH---HHHHCC--CCEEEEECC-CCCCCCHH
T ss_conf 999968998989889988788999999999975999989977887766899---999749--935886579-98897999
Q ss_pred HHHHHHHHHCCCEEEEECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHH-CCCCCCCC---CC--EEEE
Q ss_conf 9999998604667897055243-----536379999886417978991862012443200-01232200---23--5674
Q gi|254780349|r 164 EIESLAIEYNPKLIIVGGTAYS-----RVWDWERFRSIADSIGAYLMADISHISGLVVGG-QHPSPVPH---CH--IVTT 232 (433)
Q Consensus 164 ~~~~~a~~~kPklIi~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g-~~~~Pl~~---AD--vvt~ 232 (433)
.+++.+ ..++|+|++-....| -.-.++++.++|.+.+.+++.|..+- .|+-.+ .+.+|... .+ |..+
T Consensus 152 ~l~~~i-~~~~k~iil~~P~NPTG~v~s~~~l~~l~~la~~~~~~ii~DE~Y~-~l~~~~~~~~s~~~~~~~~~~vI~i~ 229 (389)
T PRK05957 152 AIEAAI-TPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYE-YFTYDGVKHFSPGSIPGSGNHTISLY 229 (389)
T ss_pred HHHHHC-CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCC-CCCCCCCCCCCHHHCCCCCCCCCCCC
T ss_conf 999845-1026278618998998988767789999987606781899898432-13458866677654456345430134
Q ss_pred CCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 045652--256744898336205650166465432234455666899999999735648999999998889999998616
Q gi|254780349|r 233 TTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL 310 (433)
Q Consensus 233 sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~ 310 (433)
|.-|+| +|=|-|.+.+.+ ++.+++.+.---...+.+.+.+.|+.+ +|.. .....++..++..++-+.+.+.|.+.
T Consensus 230 S~SK~~~~~G~RvG~~v~~~-~l~~~~~~~~~~~~~~~~~~~Q~aa~~-al~~-~~~~~~~~~~~~~~~r~~~~~~l~~~ 306 (389)
T PRK05957 230 SLSKAYGFASWRIGYMVIPI-HLLEAIKKIQDTILICPPVVSQYAALG-ALQV-GKSYCQQHLPEIAQVRQILLKSLAQL 306 (389)
T ss_pred CCCCCCCCCCCCEEEEEECH-HHHHHHHHHHHHCCCCCCHHHHHHHHH-HHHC-CHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 44312446564348898389-999999999854567853999999999-9977-99999999999999999999999856
Q ss_pred C-C-CCC-CCCCCCCEEEECCCCCCCCHHHHHH-HHHHCCEEEECCCCCCCCCCCCCCCC---CCCCCHHHHHCCCCHHH
Q ss_conf 8-5-233-4588898126316655676799999-88856718803789989999888985---12246667307999899
Q gi|254780349|r 311 G-F-DIV-SGGTDNHLMLVDLRSKRMTGKRAES-ILGRVSITCNKNSIPFDPESPFITSG---IRLGTPSGTTRGFKEKD 383 (433)
Q Consensus 311 G-~-~vv-~ggTd~H~vlvdl~~~~~~G~~a~~-~Le~~gI~~Nkn~iP~D~~~~~~~sG---iRlGT~aiTtrG~~e~e 383 (433)
+ + .+. ..|+ =.+|+++. .+++..+..+ .+++.|+.+- ||. .|-..| +||.-.+. .++.
T Consensus 307 ~~~~~~~~p~G~--f~~~~~~~-~~~~~~~~~~~ll~e~gV~v~----PG~---~Fg~~~~~~~Rlsf~~~-----~~e~ 371 (389)
T PRK05957 307 QDWCFLHPANGA--FYCFLKVN-TDLNDFELVKQLIRDYRVAVI----PGS---TFGMKNGCYLRIAYGAL-----QKAT 371 (389)
T ss_pred CCCEEECCCCEE--EEEEEECC-CCCCHHHHHHHHHHHCCEEEE----CCH---HHCCCCCCEEEEEECCC-----CHHH
T ss_conf 897266079857--99989789-896999999999997999997----873---10889999899985429-----9999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999996
Q gi|254780349|r 384 FEYIGELIAQIL 395 (433)
Q Consensus 384 m~~iA~li~~~L 395 (433)
+++-.+-|.++|
T Consensus 372 l~eg~~RL~~al 383 (389)
T PRK05957 372 AKEGIERLVQGL 383 (389)
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999999
No 69
>PRK07683 aminotransferase A; Validated
Probab=99.69 E-value=8.9e-14 Score=116.41 Aligned_cols=360 Identities=14% Similarity=0.147 Sum_probs=217.8
Q ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCC-CC-CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 67764697858999999999999998388810430-10-29899998305102886579888753360067999999999
Q gi|254780349|r 8 RFFQQSLIESDPDVFSLIGQESCRQNDEIQLIASE-NI-VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAI 85 (433)
Q Consensus 8 ~~~~~~l~~~Dpei~~~i~~e~~rq~~~l~LiASE-N~-~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~ 85 (433)
.+|++.+....|-...-+.+-..+..+.|+|--.+ ++ +++.+++++...+.... -| |+-..-..++-+...
T Consensus 3 ~~~~~r~~~~~~s~ir~~~~~~~~~~dvI~l~ig~pdf~~p~~i~~a~~~~~~~~~-~~------Y~~~~G~~~lreaia 75 (387)
T PRK07683 3 HLINPRVKDIQISGIRQFSNLVQNYDNLISLTIGQPDFPTPSHVKEAAKRAIDENY-TS------YTHNAGLLELRKAAC 75 (387)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CC------CCCCCCCHHHHHHHH
T ss_conf 78889985189888999999986799918999998999978999999999985799-98------899988799999999
Q ss_pred HHHHHHCCCCC--E-ECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99998718863--0-100001679-9999999831548748812334484111476654333332201366583235659
Q gi|254780349|r 86 ERAKKLFNVNF--V-NVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLD 161 (433)
Q Consensus 86 ~~a~~lF~a~~--a-nvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID 161 (433)
+..++-+|.+. - +|-..+|++ |...++.++++|||.|+..+...-++... ....| .+.+.++.++++..+|
T Consensus 76 ~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~pGD~Vlv~~P~Y~~~~~~---~~~~g--~~~v~v~~~~~~~~~d 150 (387)
T PRK07683 76 NFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPI---IRLCG--ATPVFIDTRETGFRLT 150 (387)
T ss_pred HHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHH---HHHCC--CEEEECCCCCCCCCCC
T ss_conf 999998589989887599927829999999999769999899837876656999---99708--7235368786788789
Q ss_pred HHHHHHHHHHHCCCEEEEECCCCCC-----CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCC---C--EEE
Q ss_conf 8999999986046678970552435-----36379999886417978991862012443200012322002---3--567
Q gi|254780349|r 162 MHEIESLAIEYNPKLIIVGGTAYSR-----VWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHC---H--IVT 231 (433)
Q Consensus 162 ~d~~~~~a~~~kPklIi~G~S~y~~-----~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~A---D--vvt 231 (433)
.+.+++.+. .+.|++++-....|- .-.++++.++|.+.+.+++.|..| ..|+-.|.+.++..+. | |+.
T Consensus 151 ~~~le~~~~-~~~k~iil~~P~NPtG~v~s~e~l~~i~~la~~~~i~ii~DEiY-~~l~~~~~~~s~~~~~~~~~~~i~~ 228 (387)
T PRK07683 151 AEALENAIT-EKTRCVVLPYPSNPTGVTLSKEELKDIANVLKDKNIFVLSDEIY-SELVYDQPHTSIAHFPEMREKTIVI 228 (387)
T ss_pred HHHHHHHCC-CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCH-HHHHCCCCCCCHHHCCCCCCEEEEE
T ss_conf 999997355-25757864799598978878999999999761369447546513-5540699877643344555403675
Q ss_pred ECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4045652--25674489833620565016646543223445566689999999973564899999999888999999861
Q gi|254780349|r 232 TTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQF 309 (433)
Q Consensus 232 ~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~ 309 (433)
+|.-|+| +|=|-|.+...+ ++.+++.+.---...+.+.+.+.|+.. ++.+ .........++..++...+.+.|.+
T Consensus 229 ~S~SK~~~~~G~RiG~i~~~~-~~~~~~~~~~~~~~~~~~~~~q~aa~~-al~~-~~~~~~~~~~~~~~r~~~~~~~L~~ 305 (387)
T PRK07683 229 NGLSKSHSMTGWRIGFLFAPS-YLAKHILKVHQYNVTCASSISQYAALE-ALTA-GKDDAKMMRHQYKKRRDYVYNRLIS 305 (387)
T ss_pred ECCCCCCCCCCCCEEEEECCH-HHHHHHHHHHHHCCCCCCHHHHHHHHH-HHHC-CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 044101367652279997599-999999999975657886899999999-9976-9889999999999999999999987
Q ss_pred CCCCCCC-CCCCCCEEEECCCCCCCCHHHH-HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHH
Q ss_conf 6852334-5888981263166556767999-9988856718803789989999888985122466673079998999999
Q gi|254780349|r 310 LGFDIVS-GGTDNHLMLVDLRSKRMTGKRA-ESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYI 387 (433)
Q Consensus 310 ~G~~vv~-ggTd~H~vlvdl~~~~~~G~~a-~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~i 387 (433)
.|+++.. .|+ -.+|+++...+.+..+. .+.++++||.+. ||..=.+.-+.-+||.-. ..++++++-
T Consensus 306 ~g~~~~~P~G~--~~~w~~~~~~~~~~~~~~~~ll~~~gV~v~----PG~~Fg~~g~g~~Rlsfa------~~~e~l~ea 373 (387)
T PRK07683 306 MGLDVEKPTGA--FYIFPSIGHFTMSSFDFALDLVEEAGLAVV----PGSAFSEYGEGYVRLSYA------YSIETLKEG 373 (387)
T ss_pred CCCCEECCCEE--EEEEEECCCCCCCHHHHHHHHHHHCCEEEE----CCHHHCCCCCCEEEEEEE------CCHHHHHHH
T ss_conf 69955678812--799678788899979999999983999998----784228899886999971------999999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999960
Q gi|254780349|r 388 GELIAQILD 396 (433)
Q Consensus 388 A~li~~~L~ 396 (433)
.+-|.++|+
T Consensus 374 l~Rl~~~l~ 382 (387)
T PRK07683 374 LDRLEAFLQ 382 (387)
T ss_pred HHHHHHHHH
T ss_conf 999999999
No 70
>PRK07550 hypothetical protein; Provisional
Probab=99.69 E-value=5e-14 Score=118.15 Aligned_cols=326 Identities=15% Similarity=0.116 Sum_probs=202.3
Q ss_pred HHHHHHHHH-HHHHHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC--
Q ss_conf 999999999-99983888104301--0298999983051028865798887533600679999999999999871886--
Q gi|254780349|r 21 VFSLIGQES-CRQNDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVN-- 95 (433)
Q Consensus 21 i~~~i~~e~-~rq~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~-- 95 (433)
|...++.+. ..-++-|+|=-.|- -+++.+++++...+...-..|| +-..-..++-+-..+..++.||.+
T Consensus 17 ~~~~~~~~~~~~G~~vI~L~~G~Pdf~~p~~i~~a~~~a~~~~~~~~Y------~~~~G~~~LR~aia~~~~~~~g~~~~ 90 (387)
T PRK07550 17 VRRWLAGYSFPAGRPLIDLSQAVPVYPPPPELRRALAEAAGDPAAHLY------GPVEGLPELREAYAAQYSRLYGAAIN 90 (387)
T ss_pred HHHHHHCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCC------CCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 999974787669997158989889898789999999999669888889------89857199999999999998688996
Q ss_pred CEECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHC
Q ss_conf 30100001679-999999983154874881233448411147665433333220136658323-5659899999998604
Q gi|254780349|r 96 FVNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-GLLDMHEIESLAIEYN 173 (433)
Q Consensus 96 ~anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~~ID~d~~~~~a~~~k 173 (433)
.-||-..+|++ |...++.+|++|||+|+..+...-++. ..+...+.+.+.+++++++ +.+|.+++++.+. .+
T Consensus 91 pe~I~it~G~~~al~~~~~al~~pGD~Vli~~P~Y~~y~-----~~~~~~G~~~~~vp~~~~~~~~~d~~~le~~~~-~~ 164 (387)
T PRK07550 91 PGQVAITSGCNQAFWAAMVTLAGAGDEVILPTPWYFNHK-----MWLDMLGIRAVLVPLDTGPGLLPDPEAAAALIT-PR 164 (387)
T ss_pred HHHEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHH-----HHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCC-CC
T ss_conf 798898767899999999997189898998279675379-----999976998973477756798779999997556-57
Q ss_pred CCEEEEECCCCC--C---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCC-CC---CC--EEEECCCCCC--CC
Q ss_conf 667897055243--5---36379999886417978991862012443200012322-00---23--5674045652--25
Q gi|254780349|r 174 PKLIIVGGTAYS--R---VWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPV-PH---CH--IVTTTTHKSL--RG 240 (433)
Q Consensus 174 PklIi~G~S~y~--~---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl-~~---AD--vvt~sTHKtl--~G 240 (433)
.|+|++-....| . .-.++++.++|.+.|.+++.|..+- .++-.+..+.++ .. .| |+.+|.-|+| +|
T Consensus 165 tk~iil~~P~NPtG~v~s~e~l~~l~~la~~~~~~iI~DEiY~-~~~~~~~~~~~~~~~~~~~~~vI~i~S~SK~~~~~G 243 (387)
T PRK07550 165 TRAIVLVTPNNPTGVVYPPELLHELYDLARRRGLALILDETYR-DFDSRGGAPHDLFADPDWGDTLVHLYSFSKAYRLTG 243 (387)
T ss_pred CCEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCHH-HHHCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCC
T ss_conf 8377038996998851077985346543033158999417578-753388777667653366755999746764456754
Q ss_pred CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCC
Q ss_conf 6744898336205650166465432234455666899999999735648999999998889999998616-852334588
Q gi|254780349|r 241 PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVSGGT 319 (433)
Q Consensus 241 PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggT 319 (433)
=|-|.+.+++ ++.+++.+...-...+.+.+.+.|+.+ ++.. ..........+..++...|.+.|.+. |+.+...|+
T Consensus 244 ~RiG~i~~~~-~~i~~~~~~~~~~~~~~~~~~q~aa~~-al~~-~~~~~~~~~~~~~~rr~~l~~~l~~~~~~~~~~~G~ 320 (387)
T PRK07550 244 HRVGALAASP-ARLAEIEKFLDTMAICAPRIGQIAVLW-GIRN-LADWVAGNRAEILRRRDALRAGFSRLPGWELLASGA 320 (387)
T ss_pred CEEEEEEECH-HHHHHHHHHHHHHCCCCCHHHHHHHHH-HHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCE
T ss_conf 2179998399-999999999976036787799999999-9863-099999999999999999999886468965478834
Q ss_pred CCCEEEECCCCCCCCHHHH-HHHHHHCCEEEECCCCCCCCCCCCCCCC---CCCCC
Q ss_conf 8981263166556767999-9988856718803789989999888985---12246
Q gi|254780349|r 320 DNHLMLVDLRSKRMTGKRA-ESILGRVSITCNKNSIPFDPESPFITSG---IRLGT 371 (433)
Q Consensus 320 d~H~vlvdl~~~~~~G~~a-~~~Le~~gI~~Nkn~iP~D~~~~~~~sG---iRlGT 371 (433)
-.+|+++...+.++.+. ++.|+++|+.+. ||. .|-++| +||+-
T Consensus 321 --~f~w~~~~~~~~~~~~~~~~ll~e~gV~v~----PG~---~Fg~~g~~~vRlsf 367 (387)
T PRK07550 321 --YFAYVRHPFPDASSDEVARRLAKEAGILCL----PGT---MFGPGGERYLRLAF 367 (387)
T ss_pred --EEEEEECCCCCCCHHHHHHHHHHHCCEEEE----CCH---HHCCCCCCEEEEEE
T ss_conf --799883788998999999999986999997----875---33889989799994
No 71
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=4.2e-14 Score=118.69 Aligned_cols=345 Identities=16% Similarity=0.172 Sum_probs=218.0
Q ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHH---HCCCCCCCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 67764697858999999999999998---38881043010--29899998305102886579888753360067999999
Q gi|254780349|r 8 RFFQQSLIESDPDVFSLIGQESCRQN---DEIQLIASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIEN 82 (433)
Q Consensus 8 ~~~~~~l~~~Dpei~~~i~~e~~rq~---~~l~LiASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~ 82 (433)
.+....++..-|=+...-.++..|+. +.|.|-+.||. +||.|++++...+.. ..=||.. ++.+-.+.
T Consensus 10 ~~~r~~i~~l~pY~~~~~~~~~~~~~~~~~~i~L~~NeNP~gpsp~v~~a~~~~~~~--~~rYPd~------~~~~Lr~a 81 (374)
T PRK05166 10 SLIRPEVRSLPPYNAGLTIEEVRARYHVPRIAKLGSNENPLGPSPALARLFPDIAEL--LRLYPDP------QGRALRAE 81 (374)
T ss_pred HHHCHHHCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHH--CCCCCCC------CHHHHHHH
T ss_conf 663766447899999998699998738998588069999989899999999986875--3769798------78999999
Q ss_pred HHHHHHHHHCCCCCEECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999999987188630100001679-9999999831548748812334484111476654333332201366583235659
Q gi|254780349|r 83 IAIERAKKLFNVNFVNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLD 161 (433)
Q Consensus 83 la~~~a~~lF~a~~anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID 161 (433)
+ .+.+|.+.-||=...|+. +...++.++++|||+|+..+...+.+-. .....| .+.+.++++++ ..+|
T Consensus 82 i-----A~~~gv~~~~I~v~nGs~e~i~~~~~a~~~pGd~Vl~~~Ptf~~Y~~---~~~~~G--~~v~~vpl~~~-~~~d 150 (374)
T PRK05166 82 I-----AASFGVPTDQIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHED---YPTLMG--ARVERVTVTPD-LTVD 150 (374)
T ss_pred H-----HHHHCCCHHHEEECCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHH---HHHHHC--CEEEEEECCCC-CCCC
T ss_conf 9-----99968383019985689999999999997399989877887778999---999829--81599736866-7979
Q ss_pred HHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHC--CCEEEECCCCHHHHHHHHCCCCCCCC---CC---EEE
Q ss_conf 899999998604667897055243--536379999886417--97899186201244320001232200---23---567
Q gi|254780349|r 162 MHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSI--GAYLMADISHISGLVVGGQHPSPVPH---CH---IVT 231 (433)
Q Consensus 162 ~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~--ga~l~~D~aH~~GLIa~g~~~~Pl~~---AD---vvt 231 (433)
+|++.+.+. .+||+|++.....| ..++-++++++++.. +.++++|.+- .-++-+..+++.++. .+ ||+
T Consensus 151 ~~~l~~ai~-~~tklv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vvvDEaY-~ef~~~~~~~~~~~~~~~~~~n~Ivl 228 (374)
T PRK05166 151 VDALLAAVA-RKPRMLMFSNPMNPVGSWLTPGALARLLDAVPPETLIVVDEAY-AEYAAGDDYPSALTLLKNRGLPWVVL 228 (374)
T ss_pred HHHHHHHHC-CCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHH-HHHHCCCCCCCHHHHHHHCCCCEEEE
T ss_conf 999998615-6987899828989987658847799999745887399950478-99752788664798862047877999
Q ss_pred ECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4045652--25674489833620565016646543223445566689999999973564899999999888999999861
Q gi|254780349|r 232 TTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQF 309 (433)
Q Consensus 232 ~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~ 309 (433)
.|.-|++ +|=|=|..+..++++.+.+++..-|...++ +.+.||.+ +|.. .......-+.+.+.-+.|.+.|.+
T Consensus 229 rSfSK~~glaGlRvGyai~~~~~i~~~l~~~~~~~~v~~--~aq~aa~a-aL~~--~~~~~~~~~~~~~~R~~l~~~L~~ 303 (374)
T PRK05166 229 RTFSKAYGLAGLRIGYGLVSDPSLRAFLDRVRTPFNANG--IAQAAALA-ALDD--EEHLAKGVALALAERERMKKELAE 303 (374)
T ss_pred EECCHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCH--HHHHHHHH-HHCC--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 955565515777504541592999999998349828699--99999999-8569--999999999999999999999997
Q ss_pred CCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf 68523345888981263166556767999998885671880378998999988898512246667307999899999999
Q gi|254780349|r 310 LGFDIVSGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGE 389 (433)
Q Consensus 310 ~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~ 389 (433)
.|+.+.. +...-+|++++ .+..+..+.|-+.||.+-...-|+ .+.-|||.. -.++|++.+-+
T Consensus 304 ~g~~v~p--s~anFilv~~~---~~~~~~~~~L~~~gI~Vr~~~~~g------l~~~lRIsv-------gt~een~rll~ 365 (374)
T PRK05166 304 MGYRVAP--SRANFLFFDAR---TDASALAEALLRQGVIVKPWKQPG------FETYIRVSI-------GSPEENDHFMA 365 (374)
T ss_pred CCCEECC--CCCEEEEEECC---CCHHHHHHHHHHCCCEEEECCCCC------CCCEEEEEE-------CCHHHHHHHHH
T ss_conf 7794899--86618998689---999999999984891998589899------999899981-------89999999999
Q ss_pred HHHHHHH
Q ss_conf 9999960
Q gi|254780349|r 390 LIAQILD 396 (433)
Q Consensus 390 li~~~L~ 396 (433)
-+.++|.
T Consensus 366 aL~~il~ 372 (374)
T PRK05166 366 ALDEVLA 372 (374)
T ss_pred HHHHHHH
T ss_conf 9999985
No 72
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.69 E-value=4.1e-15 Score=125.71 Aligned_cols=248 Identities=18% Similarity=0.179 Sum_probs=165.0
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00679999999999999871886301000016799999999831548748812334484111476654333332201366
Q gi|254780349|r 73 GCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 73 G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
|+--.+.+| ++..+|-|+++|-+-+ ||..|..++++++++|||+|+..+--.||-..- .-.+. .++
T Consensus 51 gnPT~~~le----~~la~LEg~~~a~~~s-SGmaAi~~~ll~~l~~Gd~il~~~~~Yg~t~~l--~~~l~-------~~G 116 (384)
T PRK08574 51 ENPTVRPLE----EKLAKLEGGVDALAFN-SGMAAISTLFFSLLKAGDEVVLPMEAYGTTLRL--LKSLE-------KFG 116 (384)
T ss_pred CCHHHHHHH----HHHHHHHCCCEEEEEC-CHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHH--HHHHH-------HHC
T ss_conf 886599999----9999981997189955-879999999998168999899848971459999--99998-------608
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCE
Q ss_conf 583235659899999998604667897055243--53637999988641797899186201244320001232200-235
Q gi|254780349|r 153 VRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHI 229 (433)
Q Consensus 153 ~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADv 229 (433)
+.-.-...|.++..+.+...++|+|++.....| +..|++++++||++.|+++++|.. .|+..+++|+++ |||
T Consensus 117 i~v~~~~~~~~~~~~~~~~~~Tklv~~EspsNP~l~v~Di~~ia~iA~~~g~~~vvDNT-----~atP~~~~Pl~~GaDi 191 (384)
T PRK08574 117 VRVRLAYPSTEDLIEAIKESRTKLVFIETITNPTLRVIDVPEVAKAAKDLGAILVVDNT-----FATPILYRPLEHGADF 191 (384)
T ss_pred CEEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECC-----CCHHHHCCHHHHCCCE
T ss_conf 57999489978999974478854999988999876347859999999775985997377-----5126426806648988
Q ss_pred EEECCCCCCCCCC---CEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6740456522567---4489833620565016646543223445566689999999973564899999999888999999
Q gi|254780349|r 230 VTTTTHKSLRGPR---GGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKK 306 (433)
Q Consensus 230 vt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~ 306 (433)
|..|+.|-+.|-- ||.+.++++++.+++... -...|+. ++-..+-.+ ++- ++ ....-.+|.-+||..+|+.
T Consensus 192 vvhS~TKyi~GHsdv~~G~vv~~~~~~~~~l~~~--~~~~G~~-lsp~~a~l~-~rg-l~-TL~lR~~~~~~nA~~lA~~ 265 (384)
T PRK08574 192 VVHSLTKYIAGHNDVLGGVAVVWNGEFLEELWVW--RRRLGTI-MQPFEAWLV-LRG-LK-TLEVRFERQCENAMAIAEF 265 (384)
T ss_pred EEEECCCEECCCCCCEEEEEEECCHHHHHHHHHH--HHHHCCC-CCCHHHHHH-HCC-CC-CHHHHHHHHHHHHHHHHHH
T ss_conf 9995462103886734138983517889999999--9982898-892347888-606-58-7999999999999999999
Q ss_pred HHHCCC--CCCCCCCCCC----------------EEEECCCCCCCCHHHHHHHHHHCCEE
Q ss_conf 861685--2334588898----------------12631665567679999988856718
Q gi|254780349|r 307 LQFLGF--DIVSGGTDNH----------------LMLVDLRSKRMTGKRAESILGRVSIT 348 (433)
Q Consensus 307 L~~~G~--~vv~ggTd~H----------------~vlvdl~~~~~~G~~a~~~Le~~gI~ 348 (433)
|.++.- +|..-|-.+| ++-++++. +-..+.+.+++..+.
T Consensus 266 L~~hp~V~~V~yPgl~shp~~~~a~~~~~g~~G~~~sf~l~~---~~~~~~~f~~~L~lf 322 (384)
T PRK08574 266 LSEHPKVREVHYPGLPSDPYHEVAKRLFGDLYGGVVSFRVKG---GRDAVLKFLRSLKLI 322 (384)
T ss_pred HHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEECC---CHHHHHHHHHHCCCC
T ss_conf 970999888989888999478999986799976499999729---999999999828857
No 73
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.69 E-value=4e-14 Score=118.86 Aligned_cols=339 Identities=17% Similarity=0.121 Sum_probs=199.4
Q ss_pred HHHHHHHCHHHHHHHH-HHHHHH---HHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 6469785899999999-999999---83888104301--02989999830510288657988875336006799999999
Q gi|254780349|r 11 QQSLIESDPDVFSLIG-QESCRQ---NDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIA 84 (433)
Q Consensus 11 ~~~l~~~Dpei~~~i~-~e~~rq---~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la 84 (433)
.+-+....|....-|. .-.+++ ++-|+|-..|. .+++.+++++...+.+.-..+ |+..+-..++-+-.
T Consensus 3 ~~r~~~~~~~~~~~i~~~a~~~~~~G~dvi~l~ig~pdf~~p~~i~~a~~~a~~~~~~~~------Y~~~~G~~~lreai 76 (383)
T TIGR03540 3 ADRIENLPPYLFAEIDKKKAEKKAEGVDVISLGIGDPDLPTPKHIVEALCKAAENPENHR------YPSYEGMLAYRQAV 76 (383)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCC------CCCCCCCHHHHHHH
T ss_conf 458540899899999999999985699858888998999989999999999982888765------49987849999999
Q ss_pred HHHHHHHCCCCC--E-ECCCHHHH-HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CC
Q ss_conf 999998718863--0-10000167-9999999983154874881233448411147665433333220136658323-56
Q gi|254780349|r 85 IERAKKLFNVNF--V-NVQSHSGS-QMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-GL 159 (433)
Q Consensus 85 ~~~a~~lF~a~~--a-nvqp~SG~-~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~~ 159 (433)
.+..++.+|.+. - +|-..+|+ .|...++.++++|||.|+..+...-.+.. . ......+.+.+++++++ ..
T Consensus 77 a~~~~~~~g~~~~p~~~vi~t~Ga~~al~~~~~~l~~pGD~Vli~~P~Y~~y~~---~--~~~~g~~~v~vpl~~~~~~~ 151 (383)
T TIGR03540 77 ADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRI---G--TLFAGGEPYEMPLKEENGFL 151 (383)
T ss_pred HHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHH---H--HHHCCCEEEEEECCCCCCCC
T ss_conf 999999868989967669984782599999999966898989987898601699---9--99719858996133577985
Q ss_pred CCHHHHHHHHHHHCCCEEEEECCCCC--C---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHC-CCCCCCC---CC--
Q ss_conf 59899999998604667897055243--5---363799998864179789918620124432000-1232200---23--
Q gi|254780349|r 160 LDMHEIESLAIEYNPKLIIVGGTAYS--R---VWDWERFRSIADSIGAYLMADISHISGLVVGGQ-HPSPVPH---CH-- 228 (433)
Q Consensus 160 ID~d~~~~~a~~~kPklIi~G~S~y~--~---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~-~~~Pl~~---AD-- 228 (433)
+|+|++++.+. .++|+|++.....| . .-.++++.++|.+.+.+++.|..|- .|+-.|. +++.+.. .|
T Consensus 152 ~d~e~l~~~~~-~~~k~iil~~P~NPTG~v~s~~~l~~i~~la~~~~i~iIsDEiY~-~l~~~~~~~~s~~~~~~~~~~~ 229 (383)
T TIGR03540 152 PDFDAIPEDIA-KKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYS-EITFDGYKAPSFLEVDGAKDVG 229 (383)
T ss_pred CCHHHHHHHCC-CCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCHHHH-HHCCCCCCCCCCEECCCCCCEE
T ss_conf 79999987452-377499989998970701210222201001245540576110255-5303899997711136655425
Q ss_pred EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5674045652--25674489833620565016646543223445566689999999973564899999999888999999
Q gi|254780349|r 229 IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKK 306 (433)
Q Consensus 229 vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~ 306 (433)
|+.+|.-|+| +|=|-|.+..++ ++.+++.+.--....+.+..-+.|+. .++.. ......+..+...++...|.+.
T Consensus 230 i~~~S~SK~~~~~G~RiG~~i~~~-~l~~~~~~~~~~~~~~~~~~~q~a~~-~al~~-~~~~~~~~~~~~~~~r~~~~~~ 306 (383)
T TIGR03540 230 IEFHSLSKTYNMTGWRIGMAVGNA-DLIAGLGKVKTNVDSGVFQAIQYAAI-AALNG-PQDVVKEIRKIYQRRRDLLLEA 306 (383)
T ss_pred EEEEECCCCCCCCCCEEEEECCCH-HHHHHHHHHHHHHCCCCCHHHHHHHH-HHHHC-HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 776302354478873489622899-99999999975513567659999999-99859-1999999999999999999999
Q ss_pred HHHCCCCCCCCCCCCCEEEECCCCCCCCHHHH-HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86168523345888981263166556767999-998885671880378998999988898512246
Q gi|254780349|r 307 LQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRA-ESILGRVSITCNKNSIPFDPESPFITSGIRLGT 371 (433)
Q Consensus 307 L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a-~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT 371 (433)
|.+.|+++.. ..-+-.+|+|+.. +.+..+. ...|+++||.+. ||..=...-..-+||.-
T Consensus 307 L~~~g~~~~~-p~g~~~~w~~~~~-~~~~~~~~~~ll~~~gV~v~----PG~~Fg~~g~~~iRl~~ 366 (383)
T TIGR03540 307 LKKIGIDVEK-PKATFYVWVPVPE-GYTSAEFAARLLEETGVVVT----PGVGFGEYGEGYIRISL 366 (383)
T ss_pred HHHCCCEEEC-CCCEEEEEEECCC-CCCHHHHHHHHHHHCCEEEE----CCHHHCCCCCCEEEEEE
T ss_conf 9876987735-7805799898999-98989999999983999998----88532889988699998
No 74
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.69 E-value=1.5e-13 Score=114.75 Aligned_cols=355 Identities=14% Similarity=0.142 Sum_probs=208.7
Q ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCC-CC-CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 367764697858999999999999998388810430-10-2989999830510288657988875336006799999999
Q gi|254780349|r 7 NRFFQQSLIESDPDVFSLIGQESCRQNDEIQLIASE-NI-VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIA 84 (433)
Q Consensus 7 ~~~~~~~l~~~Dpei~~~i~~e~~rq~~~l~LiASE-N~-~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la 84 (433)
++|+.+.++...+-+..-|.+-..+-.+.|+|=-.+ .+ +++.+.+++.-.+.+-. -|| +-..-..++-+..
T Consensus 3 ~~~~~~r~~~~~~s~i~~~~~~a~~~pDvI~l~~g~pdf~~p~~i~~a~~~~~~~~~-~~Y------~~~~G~~~lR~ai 75 (383)
T PRK06348 3 NKFIAKKYQQNENNLMSDIATLAKKFPDIIDLSLGDPDLITDESIIQAAFEDAKKGH-TRY------TDSTGDKELIEEI 75 (383)
T ss_pred CHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCC------CCCCCCHHHHHHH
T ss_conf 547888860189989999999983799928899968899988999999999986289-988------9986899999999
Q ss_pred HHHHHHHCCCCC--EECCCHHHH-HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCC
Q ss_conf 999998718863--010000167-999999998315487488123344841114766543333322013665-8323565
Q gi|254780349|r 85 IERAKKLFNVNF--VNVQSHSGS-QMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNV-RKEDGLL 160 (433)
Q Consensus 85 ~~~a~~lF~a~~--anvqp~SG~-~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~-d~~~~~I 160 (433)
.+..++-+|.+. -+|...+|+ .|...++.+|++|||.|+..+...-++.. .+... ..+.+.++. +.+...+
T Consensus 76 a~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~pGD~Vlv~~P~Y~~y~~---~~~~~--g~~~v~~~~~~~~~~~~ 150 (383)
T PRK06348 76 INYYKKDYNLSFKENEIMAVVGACHGMYLALQSILDPGDEVIIHEPYFTPYKD---QVEMV--GGKPIIFETYEEDGFQI 150 (383)
T ss_pred HHHHHHHHCCCCCHHHEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHH---HHHHH--CCCEEECCCCCCCCCCC
T ss_conf 99999987899976749994898999999999965999989980698602699---99980--88625324456668657
Q ss_pred CHHHHHHHHHHHCCCEEEEECCCCC--C---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC---C-C-EE
Q ss_conf 9899999998604667897055243--5---3637999988641797899186201244320001232200---2-3-56
Q gi|254780349|r 161 DMHEIESLAIEYNPKLIIVGGTAYS--R---VWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH---C-H-IV 230 (433)
Q Consensus 161 D~d~~~~~a~~~kPklIi~G~S~y~--~---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~---A-D-vv 230 (433)
|.+++++.+. .++|++++-....| . .-.++++.++|+++|.+++.|..| ..|+-.+-+.+.... . . |+
T Consensus 151 d~~~le~~i~-~~tk~iil~~P~NPTG~v~~~e~l~~l~~la~~~~i~visDEiY-~~l~~~~~~~p~~~~~~~~~~~I~ 228 (383)
T PRK06348 151 NVDKLEALIT-SKTKAIILNSPNNPTGAVFSKETLEEIAKVAIENDLVIISDEVY-DGFTFYEDFCPMASLAGMKERTIT 228 (383)
T ss_pred CHHHHHHHCC-CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCH-HHHCCCCCCCCHHHCCCCCCEEEE
T ss_conf 9689898568-78729998999798888777789999997653068699851433-442038999883222566651899
Q ss_pred EECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHH
Q ss_conf 74045652--256744898336205650166465432234455666899999999735648-999999998889999998
Q gi|254780349|r 231 TTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEF-RDYAKQIVLNSQALAKKL 307 (433)
Q Consensus 231 t~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f-~~Ya~qvv~NA~~La~~L 307 (433)
.+|.-|+| +|=|-|.+.+.+ ++.+++.+.---...+.+.+.+.|+.+ ++.. ..++ ....+..-+|...+.+.|
T Consensus 229 ~~S~SK~~~~~G~RiG~~i~p~-~~~~~~~~~~~~~~~~~~~~~q~aa~~-al~~--~~~~~~~~~~~~~~r~~~~~~~l 304 (383)
T PRK06348 229 FGSFSKDFAMTGWRIGYVIAPD-YIINTMKNINEGICFSAPTISQRAAIY-ALKH--RDTIVPPIKEEFQKRMEYAYSRI 304 (383)
T ss_pred EECCHHHCCCCCCEEEEEEECH-HHHHHHHHHHHHCCCCCCHHHHHHHHH-HHHC--CHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9214231158886079998279-999999999731766687299999999-9858--69999999999999999999999
Q ss_pred HHC-CCCCCCCCCCCCEEEECCCCCCCCHHHH-HHHHHHCCEEEECCCCCCCCCCCCCCC---CCCCCCHHHHHCCCCHH
Q ss_conf 616-8523345888981263166556767999-998885671880378998999988898---51224666730799989
Q gi|254780349|r 308 QFL-GFDIVSGGTDNHLMLVDLRSKRMTGKRA-ESILGRVSITCNKNSIPFDPESPFITS---GIRLGTPSGTTRGFKEK 382 (433)
Q Consensus 308 ~~~-G~~vv~ggTd~H~vlvdl~~~~~~G~~a-~~~Le~~gI~~Nkn~iP~D~~~~~~~s---GiRlGT~aiTtrG~~e~ 382 (433)
.+. |+.+.. -.-+-.+|+|++..+++..+. +..|+++|+.+. ||. .|-.+ -+||.-. ..++
T Consensus 305 ~~~~~~~~~~-p~G~~y~w~~~~~~~~~~~~~~~~ll~~~gV~v~----PG~---~Fg~~g~~~iRls~~------~~~~ 370 (383)
T PRK06348 305 ESIPKLSLHP-PKGSIYAFINIKKTGLSSVEFCEYLLKEAHVLVI----PGK---AFGKSGEGYIRLACT------VGLE 370 (383)
T ss_pred HHCCCCEECC-CCEEEEEEEECCCCCCCHHHHHHHHHHHCCEEEE----CCH---HHCCCCCCEEEEEEE------CCHH
T ss_conf 7489957617-8816799788999998999999999986899997----854---548899997999984------8999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254780349|r 383 DFEYIGELIAQ 393 (433)
Q Consensus 383 em~~iA~li~~ 393 (433)
++++-.+-|.+
T Consensus 371 ~l~ea~~Rl~k 381 (383)
T PRK06348 371 ELEEAFNRIEK 381 (383)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999974
No 75
>PRK06460 hypothetical protein; Provisional
Probab=99.69 E-value=3e-15 Score=126.71 Aligned_cols=246 Identities=19% Similarity=0.183 Sum_probs=166.3
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00679999999999999871886301000016799999999831548748812334484111476654333332201366
Q gi|254780349|r 73 GCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 73 G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
|+--.+.+| ++..+|-|++.+-+ .-||..|-.++++++++|||+|+..+--.||-...-. .....|+
T Consensus 43 gnPT~~~le----~~la~LEg~~~a~~-~~SGmaAi~~~l~~~l~~Gdhiv~~~~~Yg~t~~l~~--------~~l~~~G 109 (375)
T PRK06460 43 VNPTVLKLA----EKIAELEEAEMGVA-FSSGMGAISTTLLTLLKPGSSVLIHRDMFGRSYRFFT--------DFLRNWG 109 (375)
T ss_pred CCHHHHHHH----HHHHHHHCCCEEEE-ECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH--------HHHHHCC
T ss_conf 887799999----99999819980899-5359999999999972899989971787586799999--------9987378
Q ss_pred CCCCCC-CCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CC
Q ss_conf 583235-659899999998604667897055243--53637999988641797899186201244320001232200-23
Q gi|254780349|r 153 VRKEDG-LLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CH 228 (433)
Q Consensus 153 ~d~~~~-~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-AD 228 (433)
++-.-. .-|.+.+++ +...++|+|++.....| +..|++++++||++.|+.+++|.. .|...+++|+++ ||
T Consensus 110 v~v~~~d~~~~~~~~~-~~~~~Tklv~~EspsNP~l~v~Di~~i~~ia~~~gi~~vVDNT-----~atP~~~~Pl~~GaD 183 (375)
T PRK06460 110 VKVEVARPGEENILEK-IKNKRYDVVFVETISNPLLRVIDIPELSKACKENGALLIVDST-----FATPINQKPLVQGAD 183 (375)
T ss_pred EEEEEECCCCHHHHHH-HCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECC-----CCCCCCCCHHHHCCC
T ss_conf 6779738999999997-3476760899988999876405858999999874993897567-----414122881451798
Q ss_pred EEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHH-CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Q ss_conf 56740456522567---4489833620565016646-5432234455666899999999735648999999998889999
Q gi|254780349|r 229 IVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAI-FPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALA 304 (433)
Q Consensus 229 vvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~av-fPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La 304 (433)
||..|+.|.+.|-- ||++..+ .++.++|+..- .-|..-+|+ -|-++ ++- + .-+..-.++.-+||..+|
T Consensus 184 ivvhS~TKyi~GhsD~l~Gvv~~~-~~~~~~l~~~~~~~G~~lsP~---~a~l~--~rG-l-~TL~lR~~~~~~nA~~lA 255 (375)
T PRK06460 184 IVIHSASKFIAGHNDVIAGLAAGS-YELMKKIDLMRRTLGTSLDPH---AAYLT--IRG-I-KTLKIRMDVINSNAQKIA 255 (375)
T ss_pred EEEEECCCCCCCCCCEEEEEECCC-HHHHHHHHHHHHHCCCCCCHH---HHHHH--HCC-C-CCHHHHHHHHHHHHHHHH
T ss_conf 899955643467887340342481-999999999986427878816---68888--636-9-989999999999999999
Q ss_pred HHHHHCC--CCCCCCCCCCC---------------EEEECCCCCCCCHHHHHHHHHHCCEE
Q ss_conf 9986168--52334588898---------------12631665567679999988856718
Q gi|254780349|r 305 KKLQFLG--FDIVSGGTDNH---------------LMLVDLRSKRMTGKRAESILGRVSIT 348 (433)
Q Consensus 305 ~~L~~~G--~~vv~ggTd~H---------------~vlvdl~~~~~~G~~a~~~Le~~gI~ 348 (433)
+.|.++. -+|..-|-.+| ++-++++. +-.++.+.++...+.
T Consensus 256 ~~L~~hp~V~~V~yPgl~s~p~h~lakk~~~g~ggl~sf~l~~---~~~~~~~f~~~L~lf 313 (375)
T PRK06460 256 EFLQEHPKVSKVYYPGLKSHPDYGIARRVLKGYGGVVSFEIKG---SQNDALKLMKRLSVI 313 (375)
T ss_pred HHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECC---CHHHHHHHHHHCCCC
T ss_conf 9997489817798989999947999998569997426999708---999999999828826
No 76
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.68 E-value=1.3e-13 Score=115.37 Aligned_cols=363 Identities=16% Similarity=0.187 Sum_probs=217.8
Q ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 3677646978589999999999999983888104301--02989999830510288657988875336006799999999
Q gi|254780349|r 7 NRFFQQSLIESDPDVFSLIGQESCRQNDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIA 84 (433)
Q Consensus 7 ~~~~~~~l~~~Dpei~~~i~~e~~rq~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la 84 (433)
...|++.++..++-.-.-+.+-.....+.|+|=-.+- .+.+.+++++-..+.+... .|+...-..++-+..
T Consensus 4 ~~~~s~~~~~~~~s~ir~~~~~~~~~~dvI~l~ig~pdf~~p~~i~~a~~~~~~~~~~-------~Y~~~~G~~~lr~ai 76 (390)
T PRK07309 4 TKRFNKNLDKIEVSLIRQFDQSISDIPGILKLTLGEPDFTTPEHVKEAAKAAIDANQS-------HYTGMAGLLELRQAA 76 (390)
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCC-------CCCCCCCCHHHHHHH
T ss_conf 7999998712998789999998608999089989789999889999999999847999-------997997749999999
Q ss_pred HHHHHHHCCCCC--E-ECCCHHHH-HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999998718863--0-10000167-9999999983154874881233448411147665433333220136658323565
Q gi|254780349|r 85 IERAKKLFNVNF--V-NVQSHSGS-QMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLL 160 (433)
Q Consensus 85 ~~~a~~lF~a~~--a-nvqp~SG~-~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~I 160 (433)
.+..++-+|.+. . +|-..+|+ .|...++.+|++|||.|+..+...-++.. .....| -+.+.++.+.+++.+
T Consensus 77 a~~~~~~~g~~~~p~~~I~it~G~~~al~~~~~~l~~pGD~Vli~~P~Y~~~~~---~~~~~g--~~~v~v~~~~~~~~~ 151 (390)
T PRK07309 77 ADFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEP---IVNLVG--AEIVEIDTTENDFVL 151 (390)
T ss_pred HHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH---HHHHCC--CEEEEECCCCCCCCC
T ss_conf 999999858999988879988898999999999966998989983787441999---999849--889994462011578
Q ss_pred CHHHHHHHHHHH--CCCEEEEECCCCC--C---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHH-CCCCCCCC-C--CE
Q ss_conf 989999999860--4667897055243--5---36379999886417978991862012443200-01232200-2--35
Q gi|254780349|r 161 DMHEIESLAIEY--NPKLIIVGGTAYS--R---VWDWERFRSIADSIGAYLMADISHISGLVVGG-QHPSPVPH-C--HI 229 (433)
Q Consensus 161 D~d~~~~~a~~~--kPklIi~G~S~y~--~---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g-~~~~Pl~~-A--Dv 229 (433)
|.|.+++.+... |.|++++.....| + .-.++++.++|.+++.+++.|..|-- |+-.+ .+++.... . -|
T Consensus 152 ~~~~le~~~~~~~~k~k~lil~~P~NPtG~v~s~e~l~~i~~la~~~~v~iisDEiY~~-l~~~~~~~~s~~~~~~d~~i 230 (390)
T PRK07309 152 TPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALAEVLKKYDIFVISDEVYSE-LTYTGQSHVSIAEYLPDQTI 230 (390)
T ss_pred CHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCHH-CCCCCCCCCCHHHHCCCCEE
T ss_conf 99999999874888749999789989988878999999999999768989995055111-01489886448775557679
Q ss_pred EEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 674045652--256744898336205650166465432234455666899999999735648999999998889999998
Q gi|254780349|r 230 VTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKL 307 (433)
Q Consensus 230 vt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L 307 (433)
+..|.-|+| +|=|-|.+.+.+ ++.+++.+.---...+.+.+.+.++.. ++.+ .........+...++...+.+.|
T Consensus 231 ~~~s~SK~~~~~G~RiG~i~~~~-~~~~~~~~~~~~~~~~~~~~~q~a~~~-al~~-~~~~~~~~~~~y~~rr~~l~~~l 307 (390)
T PRK07309 231 LINGLSKSHAMTGWRIGLIFAPA-ELTAQLIKSHQYLVTAATTMAQFAAVE-ALTN-GKDDALPMKKEYIKRRDYIIEKM 307 (390)
T ss_pred EEECCCHHHHCCCCCEEEEECCH-HHHHHHHHHHHHHHCCCCHHHHHHHHH-HHHC-CHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99606056540466358997499-999999999865305787499999999-9974-82789999999999999999999
Q ss_pred HHCCCCCCCCCCCCCEEEECCCC-CCCCHHH-HHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHH
Q ss_conf 61685233458889812631665-5676799-999888567188037899899998889851224666730799989999
Q gi|254780349|r 308 QFLGFDIVSGGTDNHLMLVDLRS-KRMTGKR-AESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFE 385 (433)
Q Consensus 308 ~~~G~~vv~ggTd~H~vlvdl~~-~~~~G~~-a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~ 385 (433)
.+.|++++.. .-.-.+|+++.. .+.+..+ +.+.++++||.++ ||..=.+..+.-+||.-. ..++.++
T Consensus 308 ~~~~~~~~~P-~gg~ylw~~lp~~~~~d~~~~~~~l~~~~gV~v~----PG~~Fg~~g~g~iRl~~a------~~~e~l~ 376 (390)
T PRK07309 308 TALGFKIIKP-DGAFYIFAKIPAGYNQDSFKFLQDFAKEKAVAII----PGVAFGPYGEGYVRLSYA------ASMETIK 376 (390)
T ss_pred HHCCCCCCCC-CEEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEE----CCHHHCCCCCCEEEEEEE------CCHHHHH
T ss_conf 8627863389-8006980745789998999999999996999997----773228899987999982------8999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999960
Q gi|254780349|r 386 YIGELIAQILD 396 (433)
Q Consensus 386 ~iA~li~~~L~ 396 (433)
+-.+.|.++|+
T Consensus 377 eal~Rl~~~l~ 387 (390)
T PRK07309 377 EAMKRLKEYME 387 (390)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999999
No 77
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.68 E-value=5.2e-14 Score=118.02 Aligned_cols=320 Identities=18% Similarity=0.272 Sum_probs=212.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCC--CCCCC-CC-CCCCC
Q ss_conf 8875336006799999999999998718863010000167999999998315487488123344--84111-47-66543
Q gi|254780349|r 66 PSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDS--GGHLT-HG-SSVNM 141 (433)
Q Consensus 66 pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~--GGHls-hg-~~~~~ 141 (433)
-|..-|+|.+-.-.+|. -++++||-+|+ +-.|+|-.|-...|.++++||+.|++...-. -+|.- +| .++++
T Consensus 44 ~gDesYAGs~sf~~l~~----av~d~~g~~~v-~PtHQGRaAE~iLf~~~~k~g~~v~~N~hFdTTrahie~~G~~~vdl 118 (431)
T cd00617 44 LGDEAYAGSKSFYDLED----AVQDLFGFKHI-IPTHQGRGAENILFSILLKPGRTVPSNMHFDTTRGHIEANGAVPVDL 118 (431)
T ss_pred CCCHHHCCCCCHHHHHH----HHHHHCCCCCE-EECCCCHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHCCCEEEEC
T ss_conf 05653257802899999----99986499712-47687679999999983679988446878732589999769978733
Q ss_pred C-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC---CEEEEE---CCCCCCCC---CHHHHHHHHHHCCCEEEECCCCH
Q ss_conf 3-33322013665832356598999999986046---678970---55243536---37999988641797899186201
Q gi|254780349|r 142 S-GKWFKAIPYNVRKEDGLLDMHEIESLAIEYNP---KLIIVG---GTAYSRVW---DWERFRSIADSIGAYLMADISHI 211 (433)
Q Consensus 142 ~-g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kP---klIi~G---~S~y~~~~---d~~~l~eIa~~~ga~l~~D~aH~ 211 (433)
- -..++... ..+-.|++|.++++++++++-+ .+|++- -|.-..|+ +++++++||+++|..++.|++-+
T Consensus 119 ~~~ea~d~~~--~~pFKGN~Dl~kLe~~i~~~g~~~I~~v~~tiTnN~~GGQPVSm~Nir~v~~la~~~giplvlDaaRf 196 (431)
T cd00617 119 VIDEAHDAQE--LIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARF 196 (431)
T ss_pred CCHHCCCCCC--CCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHH
T ss_conf 1500048577--78848888999999999873866610899998636878856678999999999998099799876678
Q ss_pred HH---HHHHHC--C---------CCCCCCCCEEEECCCCCCCCCCCEEEEECCCCHHHHCCHHH-----CHHHHHHHHHH
Q ss_conf 24---432000--1---------23220023567404565225674489833620565016646-----54322344556
Q gi|254780349|r 212 SG---LVVGGQ--H---------PSPVPHCHIVTTTTHKSLRGPRGGLIMTNHADLAKKINSAI-----FPGLQGGPFMH 272 (433)
Q Consensus 212 ~G---LIa~g~--~---------~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~av-----fPg~qg~~~~~ 272 (433)
+- +|--.. | .-=+.|||.+|.|.-|-.-..-||+|.+||++++++...-+ ||.+ ||.--.
T Consensus 197 aENAyFIk~rE~gy~d~si~eI~rEmfs~aDg~tmSaKKD~~vniGG~ia~~D~~l~~~~~~~~i~~EGf~TY-GGlaGR 275 (431)
T cd00617 197 AENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIGGFLALRDDELYEEARQRVVLYEGFVTY-GGMAGR 275 (431)
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCC-CCCCHH
T ss_conf 8768999843530247999999999985402789970314532455678857799999997543200587443-563253
Q ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC-------CCCCHHHH-HHHHHH
Q ss_conf 6689999999973564899999999888999999861685233458889812631665-------56767999-998885
Q gi|254780349|r 273 SIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRS-------KRMTGKRA-ESILGR 344 (433)
Q Consensus 273 ~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~-------~~~~G~~a-~~~Le~ 344 (433)
-+.|+|+.|.|...++ |-+.-+.-.+.|++.|.+.|++|+. -|-.|-|.||.+. ...-|... ...-..
T Consensus 276 D~eAlA~GL~E~~d~~---yl~~Ri~qv~yL~~~L~~~GvPvv~-P~GGHav~iDA~~flPhip~~~fPa~aLa~~LY~~ 351 (431)
T cd00617 276 DMEALAQGLREAVEED---YLRHRVEQVRYLGDRLDEAGVPIVE-PAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLE 351 (431)
T ss_pred HHHHHHCCHHHHCCHH---HHHHHHHHHHHHHHHHHHCCCCEEC-CCCCEEEEEEHHHHCCCCCHHHCCHHHHHHHHHHH
T ss_conf 4999865407543679---9997799999999999988996666-89743899746774689981439189999999997
Q ss_pred CCEEEE-CCC--CCCCCCCCC-CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 671880-378--998999988-89851224666730799989999999999999602
Q gi|254780349|r 345 VSITCN-KNS--IPFDPESPF-ITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 345 ~gI~~N-kn~--iP~D~~~~~-~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
.||..- .-+ ...||...- .++-.-+=--++-||=+.-++|+-||+-+..+.+.
T Consensus 352 ~GIR~~E~Gs~~~grd~~t~e~~~~~~ElvRLAiPRRvYT~~H~dyva~~l~~l~~~ 408 (431)
T cd00617 352 AGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred CCCCEEEECCEECCCCCCCCCCCCCCCCEEEEECCCHHCCHHHHHHHHHHHHHHHHH
T ss_conf 094568540200254888766678862225671350203587999999999999955
No 78
>PRK09082 putative aminotransferase; Validated
Probab=99.68 E-value=1.3e-13 Score=115.38 Aligned_cols=334 Identities=14% Similarity=0.160 Sum_probs=212.0
Q ss_pred HHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCC--CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 64697858999999999999998388810430--1029899998305102886579888753360067999999999999
Q gi|254780349|r 11 QQSLIESDPDVFSLIGQESCRQNDEIQLIASE--NIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERA 88 (433)
Q Consensus 11 ~~~l~~~Dpei~~~i~~e~~rq~~~l~LiASE--N~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a 88 (433)
.+-|.+..+.|+..+.. ..+|.+.|+|=-.| -.+++.+++++.-.+.+-. .-|.-..-+.++-+-..+..
T Consensus 9 ~~r~~~~~~~~~~~~~~-la~~~~~I~L~~G~Pd~~~P~~i~~a~~~a~~~~~-------~~Y~~~~G~~~LReaiA~~~ 80 (386)
T PRK09082 9 QSKLPNVGTTIFTVMSA-LAAEHGAINLSQGFPDFDGPPRLVEALAYAMAAGH-------NQYPPMTGVAALREAIADKT 80 (386)
T ss_pred HHHCCCCCCCHHHHHHH-HHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCC-------CCCCCCCCCHHHHHHHHHHH
T ss_conf 77657999979999999-97059988727989999878999999999996599-------98989877199999999999
Q ss_pred HHHCCCCC---EECCCHHH-HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 98718863---01000016-799999999831548748812334484111476654333332201366583235659899
Q gi|254780349|r 89 KKLFNVNF---VNVQSHSG-SQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHE 164 (433)
Q Consensus 89 ~~lF~a~~---anvqp~SG-~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~ 164 (433)
++.+|.+. .+|-..+| +.|...++.+|++|||.|+..+...-++.. .+...+.+.+++++|+++..+|+++
T Consensus 81 ~~~~g~~~~p~~eI~vT~Ga~~al~~~~~al~~pGD~Vlv~~P~Y~~y~~-----~~~~~G~~~v~vpl~~~~~~~d~~~ 155 (386)
T PRK09082 81 ARLYGRRYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAP-----AIELAGGRAVRVALQPPDFRVDWQR 155 (386)
T ss_pred HHHHCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH-----HHHHCCCEEEEECCCCCCCCCCHHH
T ss_conf 99968998988838987788999999999975999989992686287999-----9998499899926779888879999
Q ss_pred HHHHHHHHCCCEEEEECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHH-HCCCCCCCCC---C--EEEEC
Q ss_conf 999998604667897055243-----53637999988641797899186201244320-0012322002---3--56740
Q gi|254780349|r 165 IESLAIEYNPKLIIVGGTAYS-----RVWDWERFRSIADSIGAYLMADISHISGLVVG-GQHPSPVPHC---H--IVTTT 233 (433)
Q Consensus 165 ~~~~a~~~kPklIi~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~-g~~~~Pl~~A---D--vvt~s 233 (433)
+++.+ ..|+|+|++-....| -.-.++++.++|.+.|.+++.|..+- .|+-. ..+++++... | |+.+|
T Consensus 156 l~~~i-~~~tk~iil~sP~NPTG~v~s~~~l~~l~~la~~~~i~ii~DE~Y~-~l~~d~~~~~s~~~~~~~~~~~i~i~S 233 (386)
T PRK09082 156 FAAAI-TPRTRLIILNTPHNPSGTVWSAADMDALAQLIAGTDILVLSDEVYE-HIVFDGQGHASVLRHPELRERAFVVSS 233 (386)
T ss_pred HHHHC-CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHH-HHCCCCCCCCCHHHCCCCCCCCCCCCC
T ss_conf 99636-7576499979996973601363559999999998194797112223-311389888684448653345444324
Q ss_pred CCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 45652--2567448983362056501664654322344556668999999997356489999999988899999986168
Q gi|254780349|r 234 THKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLG 311 (433)
Q Consensus 234 THKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G 311 (433)
.-|+| +|=|-|.+...+ ++.+++.+.---...+.+.+.+. +.+..+.+ .....++..+..-++...|.+.|.+.+
T Consensus 234 ~SK~~~~~G~RiG~~v~p~-~l~~~~~~~~~~~~~~~~~~~Q~-a~a~~l~~-~~~~~~~~~~~y~~rrd~l~~~L~~~~ 310 (386)
T PRK09082 234 FGKTYHVTGWKVGYCVAPA-ALSAEFRKVHQYNTFTVNTPAQL-ALADYLRA-EPEHYLELPAFYQAKRDRFRAALANSR 310 (386)
T ss_pred CCCCCCCCCCCEEEEEECH-HHHHHHHHHHHHCCCCCCHHHHH-HHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 4424578751059998789-99999999998645787689999-99999966-958999999999999999999998679
Q ss_pred CCCCC-CCCCCCEEEECCCCC-CCCHHHH-HHHHHHCCEEEECCCCCCCCCCCCCC--C---CCCCCC
Q ss_conf 52334-588898126316655-6767999-99888567188037899899998889--8---512246
Q gi|254780349|r 312 FDIVS-GGTDNHLMLVDLRSK-RMTGKRA-ESILGRVSITCNKNSIPFDPESPFIT--S---GIRLGT 371 (433)
Q Consensus 312 ~~vv~-ggTd~H~vlvdl~~~-~~~G~~a-~~~Le~~gI~~Nkn~iP~D~~~~~~~--s---GiRlGT 371 (433)
+.++. +|+ ..+|+|+... +++..++ ...++++||.+ +||. .|.. . -|||.-
T Consensus 311 ~~~~~~~G~--~f~~~~~~~~~~~~~~~f~~~l~~e~gV~v----~PG~---~F~~~~~~~~~iRl~f 369 (386)
T PRK09082 311 FKLLPCEGT--YFQLVDYSAISDLNDVEFCQWLTREHGVAA----IPLS---VFYADPFPHRLVRFCF 369 (386)
T ss_pred CEEECCCCE--EEEEEECCCCCCCCHHHHHHHHHHHCCEEE----ECCH---HHCCCCCCCCEEEEEE
T ss_conf 888479925--999886034899899999999998589999----8271---1057999999799996
No 79
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.68 E-value=1.8e-14 Score=121.30 Aligned_cols=246 Identities=17% Similarity=0.120 Sum_probs=163.8
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00679999999999999871886301000016799999999831548748812334484111476654333332201366
Q gi|254780349|r 73 GCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 73 G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
|+--.+.+| ++..+|-|++.|-+ .-||..|-.++ +++++|||+|+..+--.||-...-.. .+...+.+...+
T Consensus 48 ~nPt~~~lE----~~la~LEg~~~a~~-~sSGmAAi~a~-la~~~~Gd~iv~~~~~Yg~t~~~~~~-~l~~~GI~~~~v- 119 (379)
T PRK06176 48 GNPTRFALE----ELIADLEGGVKGFA-FASGLAGIHAV-FSLFQSGDHVLLGDDVYGGTFRLFDK-VLVKNGLSCTII- 119 (379)
T ss_pred CCHHHHHHH----HHHHHHHCCCCEEE-CCCHHHHHHHH-HHHHCCCCEEEEECCCCCCHHHHHHH-HHHCCCEEEEEE-
T ss_conf 885499999----99999829865331-25579999999-99868999899818988877674598-764478499986-
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCE
Q ss_conf 583235659899999998604667897055243--53637999988641797899186201244320001232200-235
Q gi|254780349|r 153 VRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHI 229 (433)
Q Consensus 153 ~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADv 229 (433)
|. -|.+.+++.+ +.+.|+|++..-..| ...|++++++||++.|+.+++|.. .|..++++|+++ |||
T Consensus 120 -d~----~d~~~~~~~i-~~~Tklv~~EspsNP~l~v~Di~~ia~ia~~~gi~~vvDNT-----~atP~~~~Pl~~GaDi 188 (379)
T PRK06176 120 -DT----SDLSQIKKAI-KPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNT-----FATPYYQNPLLLGADI 188 (379)
T ss_pred -CC----CCHHHHHHHC-CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECC-----CCCCCCCCHHHHCCCE
T ss_conf -78----6768899656-87745999977999876015858999999976987997367-----2151332623418988
Q ss_pred EEECCCCCCCCCC---CEEEEECCCCHHHHCCHHHC-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Q ss_conf 6740456522567---44898336205650166465-4322344556668999999997356489999999988899999
Q gi|254780349|r 230 VTTTTHKSLRGPR---GGLIMTNHADLAKKINSAIF-PGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAK 305 (433)
Q Consensus 230 vt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~avf-Pg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~ 305 (433)
|..|+.|-+.|-- ||.|.++++++++++....- -|..-+|+. |-+.. +- +. -...-.++..+||+.+|+
T Consensus 189 VihS~TKyi~GhsD~l~G~vv~~~~~~~~~~~~~~~~~G~~l~p~~---a~ll~--rG-L~-TL~lR~~~~~~nA~~vA~ 261 (379)
T PRK06176 189 VVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQD---SWLLQ--RG-IK-TLGLRMEAHQKNALCVAE 261 (379)
T ss_pred EEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCHHH---HHHHH--HC-CC-CHHHHHHHHHHHHHHHHH
T ss_conf 9995450114787740238834968999999999975077778467---89997--22-25-289999999999999999
Q ss_pred HHHHCCC--CCCCCCCC---------------CCEEEECCCCCCCCHHHHHHHHHHCCEE
Q ss_conf 9861685--23345888---------------9812631665567679999988856718
Q gi|254780349|r 306 KLQFLGF--DIVSGGTD---------------NHLMLVDLRSKRMTGKRAESILGRVSIT 348 (433)
Q Consensus 306 ~L~~~G~--~vv~ggTd---------------~H~vlvdl~~~~~~G~~a~~~Le~~gI~ 348 (433)
.|.++.- +|..-|-. .-++-++++ ++.++.+.+++..+.
T Consensus 262 ~L~~hp~V~~V~yPgL~s~p~~~la~~~~~g~gg~~sf~l~----~~~~a~~f~~~l~lf 317 (379)
T PRK06176 262 FLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLK----NDSEAVAFVESLKLF 317 (379)
T ss_pred HHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEC----CHHHHHHHHHHCCCC
T ss_conf 98719982679898999994399999767899985478856----899999999818825
No 80
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.68 E-value=2.3e-13 Score=113.62 Aligned_cols=352 Identities=15% Similarity=0.145 Sum_probs=213.1
Q ss_pred HHHHHHHHCHHHHHHHHHH-HHH---HHHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 7646978589999999999-999---983888104301--0298999983051028865798887533600679999999
Q gi|254780349|r 10 FQQSLIESDPDVFSLIGQE-SCR---QNDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENI 83 (433)
Q Consensus 10 ~~~~l~~~Dpei~~~i~~e-~~r---q~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~l 83 (433)
|.+.+....+.+..-|.+. .++ .++.|+|--.+- .+++.+.+++.-.+...-.-||+- .| ..++-+-
T Consensus 5 ~a~r~~~~~~s~~~el~~~a~~~~~~g~~vI~l~iG~Pd~~~p~~i~~a~~~~~~~~~~~~y~~----~G---~~eLRea 77 (399)
T PRK07681 5 LATRMKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGNPDMPPADFVREEMVHTANEKESYGYTL----SG---IQEFHEA 77 (399)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC----CC---CHHHHHH
T ss_conf 7778632898999999999999986799838898988999878999999999971877688898----87---3999999
Q ss_pred HHHHHHHHCCCCCE---ECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-C
Q ss_conf 99999987188630---100001679-999999983154874881233448411147665433333220136658323-5
Q gi|254780349|r 84 AIERAKKLFNVNFV---NVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-G 158 (433)
Q Consensus 84 a~~~a~~lF~a~~a---nvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~ 158 (433)
..+..++.+|.+.- +|-..+|++ |-..++.++++|||.|+..++..-++.. .+ ...+.+.+.+++++++ .
T Consensus 78 ia~~~~~~~g~~~~pd~~I~vt~G~~~al~~~~~al~~pGD~Vli~~P~Y~~y~~---~~--~~~g~~~v~vpl~~e~~~ 152 (399)
T PRK07681 78 VTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYET---GI--QMAGATSYYMPLKKENDF 152 (399)
T ss_pred HHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHH---HH--HHCCCEEEEEECCCCCCC
T ss_conf 9999999868998988849986888999999999967999989975687442799---99--876998999505766674
Q ss_pred CCCHHHHHHHHHHHCCCEEEEECCCCC--CC---CCHHHHHHHHHHCCCEEEECCCCHHHHHHHH-CCCCCCCC---CC-
Q ss_conf 659899999998604667897055243--53---6379999886417978991862012443200-01232200---23-
Q gi|254780349|r 159 LLDMHEIESLAIEYNPKLIIVGGTAYS--RV---WDWERFRSIADSIGAYLMADISHISGLVVGG-QHPSPVPH---CH- 228 (433)
Q Consensus 159 ~ID~d~~~~~a~~~kPklIi~G~S~y~--~~---~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g-~~~~Pl~~---AD- 228 (433)
.+|++++++.+. .|.|+|++-....| .. -+++++.++|.+.|.+++.|..|- .|+-.| .+.+.+.. .|
T Consensus 153 ~~d~~~l~~~i~-~~tk~iil~~P~NPTG~v~s~e~l~~l~~la~~~~i~iIsDEiY~-~l~~~~~~~~s~~~~~~~~~~ 230 (399)
T PRK07681 153 LPDLELIPEEIA-DKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYA-EFYFDGNKPISFLSVPGAKEV 230 (399)
T ss_pred HHHHHHHHHHCC-CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCC-CEEECCCCCCCHHHCCCCCCC
T ss_conf 368999998532-255599976998988877899999999998531363343125511-103179887576443354134
Q ss_pred -EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Q ss_conf -5674045652--2567448983362056501664654322344556668999999997356489999999988899999
Q gi|254780349|r 229 -IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAK 305 (433)
Q Consensus 229 -vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~ 305 (433)
|+.+|.-|+| +|=|-|.+..++ ++.+++....-....+.+.+.+.|+. .+|.+ .........+..-++...|.+
T Consensus 231 ~I~i~S~SK~~~~~G~RiG~~i~~~-~~i~~~~~~~~~~~~~~~~~~q~aa~-~al~~-~~~~~~~~r~~~~~rr~~l~~ 307 (399)
T PRK07681 231 GVEINSLSKSYSLAGSRIGYMIGNE-EIVRALTQFKSNTDYGVFLPIQKAAC-AALRN-GAAFCEKNREIYQERRDTLVD 307 (399)
T ss_pred CCEECCCCCCCCCCCCCEEEEEECH-HHHHHHHHHHHHCCCCCCHHHHHHHH-HHHHC-CHHHHHHHHHHHHHHHHHHHH
T ss_conf 5253221345556532169997099-99999999998665674539999999-99968-747899999999999999999
Q ss_pred HHHHCCCCCCC-CCCCCCEEEECCCCCCCCHHHH-HHHHHHCCEEEECCCCCCCCCCCCCCCC---CCCCCHHHHHCCCC
Q ss_conf 98616852334-5888981263166556767999-9988856718803789989999888985---12246667307999
Q gi|254780349|r 306 KLQFLGFDIVS-GGTDNHLMLVDLRSKRMTGKRA-ESILGRVSITCNKNSIPFDPESPFITSG---IRLGTPSGTTRGFK 380 (433)
Q Consensus 306 ~L~~~G~~vv~-ggTd~H~vlvdl~~~~~~G~~a-~~~Le~~gI~~Nkn~iP~D~~~~~~~sG---iRlGT~aiTtrG~~ 380 (433)
.|.+.|+.+.. .|+ =.+|+++. .+.++.+. .+.|+++|+.+. ||. .|-++| +||.-. ..
T Consensus 308 ~L~~~g~~~~~P~Gg--~y~w~~l~-~~~d~~~f~~~Ll~~~gV~v~----PG~---~Fg~~g~g~iRl~f~------~~ 371 (399)
T PRK07681 308 GFRTFGWNVDKPAGS--MFVWAEIP-DGWTSLDFAYALMDRANVVVT----PGH---AFGPHGEGFVRIALV------QD 371 (399)
T ss_pred HHHHCCCEECCCCCE--EEEEEECC-CCCCHHHHHHHHHHHCCEEEE----CCH---HHCCCCCCEEEEEEE------CC
T ss_conf 998759863378800--28968899-999979999999982999998----864---658999886999971------88
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 89999999999999
Q gi|254780349|r 381 EKDFEYIGELIAQI 394 (433)
Q Consensus 381 e~em~~iA~li~~~ 394 (433)
++++++-.+-|.++
T Consensus 372 ~e~l~eal~RLk~a 385 (399)
T PRK07681 372 KEVLQQVVENIRNS 385 (399)
T ss_pred HHHHHHHHHHHHHC
T ss_conf 99999999999888
No 81
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.68 E-value=2.6e-15 Score=127.10 Aligned_cols=280 Identities=20% Similarity=0.231 Sum_probs=173.3
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHH
Q ss_conf 88810430102989999830510288657988875336006799999999999998718863010000167999999998
Q gi|254780349|r 35 EIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLA 114 (433)
Q Consensus 35 ~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~A 114 (433)
.-+...|..|..+....+. ..+..+ ..||-=.| .|+--.+.+| ++..+|-|++.|-+-+ ||..|-.+++++
T Consensus 29 ~~PIy~sstf~f~~~~~~~-~~~~~~-~~g~~YsR--~~NPT~~~lE----~~la~LEg~~~a~~~~-SGmaAi~~~lla 99 (397)
T PRK07504 29 SEALFLTQGFVYDTAEAAE-ARFKGE-DPGFIYSR--YSNPTVDMFE----KRMCALEGAEDARATA-SGMAAVTAAILC 99 (397)
T ss_pred CCCCCCCCCEEECCHHHHH-HHHCCC-CCCCEEEC--CCCHHHHHHH----HHHHHHHCCCEEEEEC-CHHHHHHHHHHH
T ss_conf 2782067673318889999-873688-68963408--9886499999----9999982998598734-499999999998
Q ss_pred HHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHH
Q ss_conf 31548748812334484111476654333332201366583235-659899999998604667897055243--536379
Q gi|254780349|r 115 LMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDG-LLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWE 191 (433)
Q Consensus 115 Ll~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~-~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~ 191 (433)
++++||+|+..+--.||-... .-.+ .-.|+++-.-. .-|.+++++.+ +.+.|+|++.....| ...|++
T Consensus 100 ~l~~Gdhiv~~~~~Yg~t~~l--~~~~------l~~~Gi~~~~vd~~d~~~~~~ai-~~~Tklv~~EspsNP~l~v~Di~ 170 (397)
T PRK07504 100 QLKAGDHVVAARALFGSCRYV--VETL------LPRYGIESTLVDGLDLDNWEKAV-RPNTKVFFLESPTNPTLEVIDIA 170 (397)
T ss_pred HCCCCCEEEECCCCCHHHHHH--HHHH------HHCCCEEEEEECCCCHHHHHHHC-CCCCEEEEEECCCCCCCEECCCH
T ss_conf 558999898558875569999--9999------86078589987898858899745-87753999854899974513719
Q ss_pred HHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHH-CHHHH
Q ss_conf 99988641797899186201244320001232200-2356740456522567---4489833620565016646-54322
Q gi|254780349|r 192 RFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAI-FPGLQ 266 (433)
Q Consensus 192 ~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~av-fPg~q 266 (433)
++++||++.|+.+++|.. .|...+++||++ ||||..|+.|.+.|.- ||.+.++++.+.+++.... .-|..
T Consensus 171 ~ia~iA~~~g~~~vVDNT-----fatP~~~~Pl~~GaDiVvhS~TKyi~GHsDvlgGvv~~~~~~~~~~~~~~~~~~G~~ 245 (397)
T PRK07504 171 AVAEIANQAGAKLVVDNV-----FATPLFQKPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPS 245 (397)
T ss_pred HHHHHHHHCCCEEEEECC-----CCCCCCCCHHHHCCCEEEEECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCC
T ss_conf 999999982995997366-----221112684562888799742521258876254699555899999999999971887
Q ss_pred HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCCCC---------------EEEECCC
Q ss_conf 344556668999999997356489999999988899999986168--52334588898---------------1263166
Q gi|254780349|r 267 GGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLG--FDIVSGGTDNH---------------LMLVDLR 329 (433)
Q Consensus 267 g~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G--~~vv~ggTd~H---------------~vlvdl~ 329 (433)
-+|+- +-.+. +- +. -...-.+|-.+||..+|+.|.+.. -+|..-|-.+| ++-++++
T Consensus 246 ~~p~~----a~l~l-RG-L~-TL~lRm~r~~~nA~~iA~~L~~hp~V~~V~yPgl~s~p~~~~a~k~~~g~gg~~sf~l~ 318 (397)
T PRK07504 246 LSPFN----AWVLL-KG-LE-TLAVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIVAKQMTGGSTLVAFELK 318 (397)
T ss_pred CCHHH----HHHHH-CC-CC-CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEE
T ss_conf 88378----89987-16-77-29999999999999999999738995579798987782788999857998524589982
Q ss_pred CCCCCHHHHHHHHHHCCE
Q ss_conf 556767999998885671
Q gi|254780349|r 330 SKRMTGKRAESILGRVSI 347 (433)
Q Consensus 330 ~~~~~G~~a~~~Le~~gI 347 (433)
. +-..+.+.++...+
T Consensus 319 ~---~~~~~~~f~~~L~l 333 (397)
T PRK07504 319 G---GKEAAFRFLNALKI 333 (397)
T ss_pred C---CHHHHHHHHHCCCC
T ss_conf 8---89999999980891
No 82
>PRK07682 hypothetical protein; Validated
Probab=99.68 E-value=5.2e-14 Score=118.03 Aligned_cols=335 Identities=16% Similarity=0.144 Sum_probs=206.2
Q ss_pred HHCCCCCCCCC-C-CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC--E-ECCCHHHHH-
Q ss_conf 83888104301-0-2989999830510288657988875336006799999999999998718863--0-100001679-
Q gi|254780349|r 33 NDEIQLIASEN-I-VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNF--V-NVQSHSGSQ- 106 (433)
Q Consensus 33 ~~~l~LiASEN-~-~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~--a-nvqp~SG~~- 106 (433)
++-|+|=-.+. + +.+.+++++...+.+ |+.| |+-..-..++-+...+..++-||.+. . +|...+|++
T Consensus 20 ~dvi~l~vgdpdf~~p~~i~ea~~~~~~~----g~~~---Y~~~~G~~~lreaia~~~~~r~g~~~~p~~~i~vt~G~~~ 92 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQ----GYTS---YTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQ 92 (378)
T ss_pred CCCEECCCCCCCCCCCHHHHHHHHHHHHC----CCCC---CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHH
T ss_conf 98288999989998789999999999856----9999---8999888999999999999984899997775999078599
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 999999983154874881233448411147665433333220136658323-5659899999998604667897055243
Q gi|254780349|r 107 MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-GLLDMHEIESLAIEYNPKLIIVGGTAYS 185 (433)
Q Consensus 107 An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~~ID~d~~~~~a~~~kPklIi~G~S~y~ 185 (433)
|...++.+|++|||.|+..+...-++. ......| ...++++.+.++ ..+|.+++++.+. .+.|+|++-....|
T Consensus 93 al~~~~~~l~~pGD~Vlv~~P~Y~~y~---~~~~~~g--~~~v~~~~~~~~~~~~d~~~le~~~~-~~~k~iil~~P~NP 166 (378)
T PRK07682 93 ALDVAMRAIINPGDEVLIVEPSFVSYA---PLVTLAG--GVPVPVATSLENEFKVQPAQIEAAIT-AKTKAILLCSPNNP 166 (378)
T ss_pred HHHHHHHHHCCCCCEEEEECCCHHHHH---HHHHHHC--CEEEEECCCCCCCCCCCHHHHHHHCC-CCCCEEEECCCCCC
T ss_conf 999999996599998999258505279---9999818--85699402654586379999997365-26838998289798
Q ss_pred --C---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC---CC--EEEECCCCCC--CCCCCEEEEECCCCH
Q ss_conf --5---3637999988641797899186201244320001232200---23--5674045652--256744898336205
Q gi|254780349|r 186 --R---VWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH---CH--IVTTTTHKSL--RGPRGGLIMTNHADL 253 (433)
Q Consensus 186 --~---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~---AD--vvt~sTHKtl--~GPrgGiI~~~~~e~ 253 (433)
+ .-.++++.++|.+.+.+++.|..| ..|+-.+.|.+.... .| |+.+|.-|+| +|=|-|.+...+ ++
T Consensus 167 tG~v~s~~el~~l~~la~~~~i~iisDEiY-~~l~~~~~~~~~~~~~~~~~~~i~~~s~SK~f~l~G~R~G~~~~~~-~~ 244 (378)
T PRK07682 167 TGAVLNKSELEEIAVIVEKHNLIVLSDEIY-AELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGMIAAPV-YF 244 (378)
T ss_pred CCCCCCHHHHHHHHHHHHHCCEEEECCCHH-HHHCCCCCCCCHHHCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECH-HH
T ss_conf 888889999999999764459679522014-6530698767765525644454202341242078573069897089-99
Q ss_pred HHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCEEEECCCCCC
Q ss_conf 650166465432234455666899999999735648999999998889999998616852334-5888981263166556
Q gi|254780349|r 254 AKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVS-GGTDNHLMLVDLRSKR 332 (433)
Q Consensus 254 ~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~-ggTd~H~vlvdl~~~~ 332 (433)
.+++.+.---...+.+.+.+.|+.+ ++.. .........+...++...+.+.|.+.|+.+.. +|+ -.+|+|+++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~q~aa~~-al~~-~~~~~~~~~~~~~~~r~~~~~~l~~~g~~~~~P~g~--~~~~~~~~~~~ 320 (378)
T PRK07682 245 SEAMLKIHQYSMMCAPTMAQFAALE-ALRN-GNDDVERMRDSYRKRRNFFVTSLNEIGLTCHVPGGA--FYAFPSISSTG 320 (378)
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHH-HHHC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEE--EEEEEECCCCC
T ss_conf 9999999975567798489999999-9975-768799999999999999999999759822068867--89957878889
Q ss_pred CCHHHHH-HHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 7679999-988856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 333 MTGKRAE-SILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 333 ~~G~~a~-~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
++..+.. +.|++.||.+. ||..=.+.-..-+||.-. ..++.+++-.+-|.++|+
T Consensus 321 ~~~~~~~~~ll~~~~V~v~----PG~~Fg~~g~~~iRl~~a------~~~e~l~eal~Rl~~~l~ 375 (378)
T PRK07682 321 LSSEEFAEQLLLEEKVAVV----PGSVFGESGEGFIRCSYA------TSLEQLQEAMKRMKRFVE 375 (378)
T ss_pred CCHHHHHHHHHHHCCEEEE----CCHHHCCCCCCEEEEEEC------CCHHHHHHHHHHHHHHHH
T ss_conf 8999999999996999998----862228999897999961------999999999999999998
No 83
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.67 E-value=1.8e-13 Score=114.22 Aligned_cols=320 Identities=16% Similarity=0.148 Sum_probs=209.8
Q ss_pred HHCCCCCCCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH-HHH
Q ss_conf 838881043010--29899998305102886579888753360067999999999999987188630100001679-999
Q gi|254780349|r 33 NDEIQLIASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQ-MNQ 109 (433)
Q Consensus 33 ~~~l~LiASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~-An~ 109 (433)
.+-|-|=+.||. +||.|++++...+.+ ..-||.. ++.+- .+...+.+|.+.-+|-..+|+. +..
T Consensus 32 ~~ii~l~~Nenp~gp~~~v~~ai~~~~~~--~~~YPd~------~~~~L-----r~aiA~~~~v~~~~Ilv~nGs~e~i~ 98 (367)
T PRK02731 32 ADIIKLASNENPLGPSPKAIEAIRAAADE--LHRYPDG------SGFEL-----KAALAEKFGVDPEQIILGNGSDEILE 98 (367)
T ss_pred CCEEEECCCCCCCCCCHHHHHHHHHHHHH--HCCCCCC------CHHHH-----HHHHHHHHCCCHHHEEECCCHHHHHH
T ss_conf 87688119899999899999999987755--1159598------78999-----99999997858111998578999999
Q ss_pred HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CC
Q ss_conf 9999831548748812334484111476654333332201366583235659899999998604667897055243--53
Q gi|254780349|r 110 GVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RV 187 (433)
Q Consensus 110 av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~ 187 (433)
.++.++++|||+|+..+...+.+-. .....| .+.+..+. ++..+|.|++.+.+ ..++|+|++.....| ..
T Consensus 99 l~~~a~~~pgd~Vl~~~P~f~~Y~~---~a~~~G--~~~~~vp~--~~~~~d~~~l~~~i-~~~tklv~l~nPnNPTG~~ 170 (367)
T PRK02731 99 LLARAYLGPGDEVIYSEHAFAVYPI---AAQAVG--AKPVEVPA--KDYGHDLDAMLAAV-TPRTKLVFIANPNNPTGTY 170 (367)
T ss_pred HHHHHHHCCCCEEEECCCCHHHHHH---HHHHCC--CEEEEECC--CCCCCCHHHHHHHC-CCCCCEEEECCCCCCCCCC
T ss_conf 9999984799864447986268999---999829--88999547--67765968999855-8788689982899998865
Q ss_pred CCHHHHHHHHHHC--CCEEEECCCCHHHHHHHHCCCCCCCC----CC-EEEECCCCC--CCCCCCEEEEECCCCHHHHCC
Q ss_conf 6379999886417--97899186201244320001232200----23-567404565--225674489833620565016
Q gi|254780349|r 188 WDWERFRSIADSI--GAYLMADISHISGLVVGGQHPSPVPH----CH-IVTTTTHKS--LRGPRGGLIMTNHADLAKKIN 258 (433)
Q Consensus 188 ~d~~~l~eIa~~~--ga~l~~D~aH~~GLIa~g~~~~Pl~~----AD-vvt~sTHKt--l~GPrgGiI~~~~~e~~~~i~ 258 (433)
++.+++.++++.. +++++.|.+- .-++-.+.++++++. -+ +++.|.-|+ ++|=|=|.++++. ++.+.++
T Consensus 171 ~~~~~l~~l~~~~~~~~~vviDEaY-~ef~~~~~~~~~~~l~~~~~n~iv~rSfSK~~glaGlRlGy~ia~~-~~i~~l~ 248 (367)
T PRK02731 171 LPAEEVERFLAGVPPDVLVVLDEAY-AEYVARKDYEDGIELVKEFPNVVVTRTFSKAYGLAGLRVGYGIAPP-EIIDALN 248 (367)
T ss_pred CCHHHHHHHHHHCCCCCEEEEEHHH-HHHCCCCCCCCHHHHHHHCCCEEEEEECCHHHCCCCCCEEEEECCH-HHHHHHH
T ss_conf 7569999999854557638841126-7642576665589997623764799746666516887058886699-9999999
Q ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHH
Q ss_conf 64654322344556668999999997356489999999988899999986168523345888981263166556767999
Q gi|254780349|r 259 SAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRA 338 (433)
Q Consensus 259 ~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a 338 (433)
+..-|-..+. +.+.||.+ +|.. +...+...+.+.++-+.|.+.|.+.|+++.. ++...+|+++. .+.+..++
T Consensus 249 ~~~~p~~v~~--~aq~aa~a-aL~d--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~p--s~~nFil~~~~-~~~~a~~~ 320 (367)
T PRK02731 249 RVRQPFNVNS--LALAAAVA-ALDD--DAFVEKSRELNAKGMARLEEFLAELGLEYIP--SYGNFILVDFD-DGKDAAAI 320 (367)
T ss_pred HHHCCCCCCH--HHHHHHHH-HHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEECC--CCCEEEEEECC-CCCCHHHH
T ss_conf 9847665889--99999999-9669--9999999999999999999999978498878--98618999889-99999999
Q ss_pred HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9988856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 339 ESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 339 ~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
.+.|.+.||.+-. +.. .-.+.-+||+.- .++|++.+-+-+.++|.
T Consensus 321 ~~~L~~~gI~vr~----~~~--fgl~~~~Risig-------t~een~~li~al~~~l~ 365 (367)
T PRK02731 321 YEALLKRGVIVRP----LAG--YGLPNALRITIG-------TPEENRRFLAALKEFLA 365 (367)
T ss_pred HHHHHHCCEEEEE----CCC--CCCCCEEEEEEC-------CHHHHHHHHHHHHHHHH
T ss_conf 9999968938985----888--899896999928-------99999999999999985
No 84
>PRK08363 alanine aminotransferase; Validated
Probab=99.67 E-value=1.6e-13 Score=114.61 Aligned_cols=345 Identities=17% Similarity=0.132 Sum_probs=209.5
Q ss_pred HHHHHHHH--H-HHHHHHCCCCCCCCC-----CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999--9-999983888104301-----029899998305102886579888753360067999999999999987
Q gi|254780349|r 20 DVFSLIGQ--E-SCRQNDEIQLIASEN-----IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKL 91 (433)
Q Consensus 20 ei~~~i~~--e-~~rq~~~l~LiASEN-----~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~l 91 (433)
.|.+++++ | ++.-++.|+|-..|= -+++.+.++....+.+. ..+|+-.+-..++-+-..+..++-
T Consensus 14 ~i~~i~~~a~~l~~~G~~vi~l~iG~P~~~df~~p~~i~~a~~~a~~~~-------~~~Y~~~~G~~~LR~aia~~~~~~ 86 (398)
T PRK08363 14 AIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEG-------HNYYGPSEGLPELREAIVKREKRK 86 (398)
T ss_pred EHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCC-------CCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 0667999999999779970685698999789998999999999999718-------998899887599999999999998
Q ss_pred CCCCC--EECCCHHH-HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCHHHHHH
Q ss_conf 18863--01000016-7999999998315487488123344841114766543333322013665-83235659899999
Q gi|254780349|r 92 FNVNF--VNVQSHSG-SQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNV-RKEDGLLDMHEIES 167 (433)
Q Consensus 92 F~a~~--anvqp~SG-~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~-d~~~~~ID~d~~~~ 167 (433)
||.+. -||-..+| +.|...++.+|++|||.|+..+...-.+.+ .+.. .....+.|+. +.++..+|.|++++
T Consensus 87 ~g~~~~pd~I~vt~G~~~al~~~~~~l~~pGD~Vlvp~P~Y~~y~~---~~~~--~g~~~v~~~~~~~~~~~~d~~~l~~ 161 (398)
T PRK08363 87 NGVDITPDDVRVTNAVTEALQMLFGALLDPGDEILIPGPSYPPYTG---LVKF--YGGVPVEYRTIEEEGWQPDIDDIRK 161 (398)
T ss_pred HCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHH---HHHH--CCCEEECCCCCCCCCCCCCHHHHHH
T ss_conf 6899866888985778999999999966998989986675674389---9998--3997843688621489689999997
Q ss_pred HHHHHCCCEEEEECCCCC--C---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC---CC-EEEECCCCC-
Q ss_conf 998604667897055243--5---3637999988641797899186201244320001232200---23-567404565-
Q gi|254780349|r 168 LAIEYNPKLIIVGGTAYS--R---VWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH---CH-IVTTTTHKS- 237 (433)
Q Consensus 168 ~a~~~kPklIi~G~S~y~--~---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~---AD-vvt~sTHKt- 237 (433)
.+. .++|+|++-....| . .-.++++.++|.+.+.+++.|..+ ..|+-.|.+.+|... .. ++.+|.-|+
T Consensus 162 ~i~-~~tk~i~l~nP~NPTG~v~s~~~l~~i~~la~~~~~~vIsDEiY-~~l~~~~~~~s~~~~~~~~~vi~i~s~SK~~ 239 (398)
T PRK08363 162 KIT-EKTKAIAVINPNNPTGALYDKKTLKEILDIAGEHDLPVISDEIY-DLMTYEGKHVSPGSLTKDVPVIVMNGLSKVY 239 (398)
T ss_pred HCC-CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECHHHH-HHHCCCCCCCCHHHHCCCCCEEEEECCCCCC
T ss_conf 531-13729998799998888654889999999987559647613346-6641699877977828677889982550304
Q ss_pred -CCCCCCEEEEECCC-CHHHHCCHHHCHHH---HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-C
Q ss_conf -22567448983362-05650166465432---234455666899999999735648999999998889999998616-8
Q gi|254780349|r 238 -LRGPRGGLIMTNHA-DLAKKINSAIFPGL---QGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-G 311 (433)
Q Consensus 238 -l~GPrgGiI~~~~~-e~~~~i~~avfPg~---qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G 311 (433)
++|=|-|.+.+.++ +....+.+++.... .+.+..-+.|+.+ ++.. -.....++.+..-++...+.+.|.+. |
T Consensus 240 ~~~G~RiG~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~-al~~-~~~~~~~~~~~~~~rrd~~~~~L~~~~g 317 (398)
T PRK08363 240 FATGWRLGYIYFVDPEGKLDEVREALDKLARIRLCPNTPAQFAAIA-GLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPG 317 (398)
T ss_pred CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH-HHHC-CHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 7856136999975838999999999999855064777399999999-9866-8778999999999999999999971799
Q ss_pred CCCCC-CCCCCCEEEECCCCC-CCCHHH-HHHHHHHCCEEEECCCCCCCCCCCCCCC---CCCCCCHHHHHCCCCHHHHH
Q ss_conf 52334-588898126316655-676799-9998885671880378998999988898---51224666730799989999
Q gi|254780349|r 312 FDIVS-GGTDNHLMLVDLRSK-RMTGKR-AESILGRVSITCNKNSIPFDPESPFITS---GIRLGTPSGTTRGFKEKDFE 385 (433)
Q Consensus 312 ~~vv~-ggTd~H~vlvdl~~~-~~~G~~-a~~~Le~~gI~~Nkn~iP~D~~~~~~~s---GiRlGT~aiTtrG~~e~em~ 385 (433)
+++.. .|+ -.+|+++... ..+..+ +.+.|++.||.+. ||. .|-+. -+||.-. + .++.++
T Consensus 318 ~~~~~P~G~--~y~~~~l~~~~~~~~~ef~~~ll~e~gV~v~----PG~---~Fg~~g~g~vRlsf~--~----~~e~l~ 382 (398)
T PRK08363 318 ISTTKPQGA--FYIFPRIEEGPWKDDKEFVLDLLHEAHVLFV----HGS---GFGEYGAGHFRLVFL--P----PVEILE 382 (398)
T ss_pred CEECCCCEE--EEEEEECCCCCCCCHHHHHHHHHHHCCEEEE----CCH---HHCCCCCCEEEEEEE--C----CHHHHH
T ss_conf 575588878--8983787888999999999999985999998----964---328899986999983--8----999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999996
Q gi|254780349|r 386 YIGELIAQIL 395 (433)
Q Consensus 386 ~iA~li~~~L 395 (433)
+-.+-|.+.|
T Consensus 383 eal~Rl~~~l 392 (398)
T PRK08363 383 EAMDRFEEFM 392 (398)
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
No 85
>PRK05968 hypothetical protein; Provisional
Probab=99.67 E-value=1.2e-14 Score=122.46 Aligned_cols=278 Identities=16% Similarity=0.154 Sum_probs=174.7
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHH
Q ss_conf 81043010298999983051028865798887533600679999999999999871886301000016799999999831
Q gi|254780349|r 37 QLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALM 116 (433)
Q Consensus 37 ~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl 116 (433)
+...|..|..+...+.. ..+.++ ..||-=.| .|+--.+.+| ++...|-|++.|-+ .-||..|-.+++++++
T Consensus 29 PIy~sstf~f~~~~~~~-~~~~~~-~~g~~YsR--~~NPT~~~lE----~~la~LEgg~~a~~-~sSGmaAis~~l~~ll 99 (389)
T PRK05968 29 PIFQTSLFTFDSYDEME-AVYAGE-TVRPIYTR--GDNPTVRAFE----EMLAKLEGAEDARG-FASGMAAISSTVLSFV 99 (389)
T ss_pred CCCCCCCEEECCHHHHH-HHHCCC-CCCCEEEC--CCCHHHHHHH----HHHHHHHCCCEEEE-ECCHHHHHHHHHHHHH
T ss_conf 80277764618999999-874688-67961428--9886699999----99999829963888-5488999999999960
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHH
Q ss_conf 548748812334484111476654333332201366583235659899999998604667897055243--536379999
Q gi|254780349|r 117 HPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFR 194 (433)
Q Consensus 117 ~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~ 194 (433)
+|||+|+..+--.||-..--.. .+...+.++..+ |. -|.+.+++.+ .+.|+|++.....| ...|++.++
T Consensus 100 ~~Gd~iv~~~~~YggT~~l~~~-~l~~~GI~v~~v--d~----~d~~~~~~~i--~~Tklv~~EtpsNP~l~v~DI~~ia 170 (389)
T PRK05968 100 EPGDRIVAVRHVYPDAYRLFGT-LLKRMGVEVDYV--DG----RDEEAVAKAL--PGAKLLYLESPTSWVFELQDIAALA 170 (389)
T ss_pred CCCCEEEECCCCCCCHHHHHHH-HHHCCCCEEEEE--CC----CCHHHHHHCC--CCCCEEEEECCCCCCCCCCCHHHHH
T ss_conf 8999898588766758999998-886078469996--89----9999999627--6872899978999887273899999
Q ss_pred HHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHHCH--HHHHH
Q ss_conf 88641797899186201244320001232200-2356740456522567---448983362056501664654--32234
Q gi|254780349|r 195 SIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAIFP--GLQGG 268 (433)
Q Consensus 195 eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~avfP--g~qg~ 268 (433)
+||++.|+++++|..- |...+++|+++ ||||..|+.|-+.|-- ||+|.++++ +..++....+. |..-+
T Consensus 171 ~iA~~~g~~~vVDNTf-----atP~~~~Pl~~GaDivvhS~TKyi~GHsDvl~G~v~~~~~-~~~~~~~~~~~~lG~~ls 244 (389)
T PRK05968 171 ALAKRHGVVTVIDNSW-----ASPVFQRPITLGVDLVIHSASKYLGGHSDTVAGVVAGSKE-HIARINAEAYPYLGGKLS 244 (389)
T ss_pred HHHHHCCCEEEEECCC-----CHHHHCCHHHHCCCEEEEECCCCCCCCCCCEEEEEECCHH-HHHHHHHHHHHHCCCCCC
T ss_conf 9999839959997786-----1164258424079879970453446898844269945699-999999999986277788
Q ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCCC----------EEEECCCCCCCCHH
Q ss_conf 45566689999999973564899999999888999999861685--2334588898----------12631665567679
Q gi|254780349|r 269 PFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGF--DIVSGGTDNH----------LMLVDLRSKRMTGK 336 (433)
Q Consensus 269 ~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~--~vv~ggTd~H----------~vlvdl~~~~~~G~ 336 (433)
|+- +-. .++- +. -...-++|--+||..+|+.|.++.- +|..-|-.+| ++-++++. |.
T Consensus 245 P~~----a~l-~lRG-L~-TL~lRm~rh~~nA~~vA~~L~~hp~V~~V~yPgL~shp~~~l~g~gg~~sf~l~~----~~ 313 (389)
T PRK05968 245 PFE----AWL-LLRG-LR-TLPLRMKAHEASALLIARRLKAHPVVETVCHPALANHPPAGLSGTSGLFSFIFRE----GV 313 (389)
T ss_pred HHH----HHH-HHCC-CC-CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHCCCCCEEEEEEECC----HH
T ss_conf 588----899-9847-98-6999999999999999999961999866338885223134217864379999577----79
Q ss_pred HHHHHHHHCCEEE
Q ss_conf 9999888567188
Q gi|254780349|r 337 RAESILGRVSITC 349 (433)
Q Consensus 337 ~a~~~Le~~gI~~ 349 (433)
++.+.++...+..
T Consensus 314 ~~~~f~~~L~lf~ 326 (389)
T PRK05968 314 DVRRFADALKLFR 326 (389)
T ss_pred HHHHHHHHCCCCE
T ss_conf 9999998488075
No 86
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.67 E-value=5.7e-15 Score=124.73 Aligned_cols=250 Identities=18% Similarity=0.174 Sum_probs=165.1
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00679999999999999871886301000016799999999831548748812334484111476654333332201366
Q gi|254780349|r 73 GCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 73 G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
|+--...+| ++..+|=|+++|-+-+ ||..|..++++++++|||+|+..+--.||-...-.. .+...+.++..|
T Consensus 38 ~nPT~~~le----~~la~LEg~~~a~~~s-SGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~~~~~-~l~~~Gi~v~~~- 110 (369)
T cd00614 38 GNPTVDALE----KKLAALEGGEAALAFS-SGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFER-LLPKLGIEVTFV- 110 (369)
T ss_pred CCHHHHHHH----HHHHHHHCCCCEEEEC-CHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHH-HHHCCCEEEEEE-
T ss_conf 886799999----9999982998089965-789999999998528899999957885239999997-786089238976-
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCE
Q ss_conf 583235659899999998604667897055243--53637999988641797899186201244320001232200-235
Q gi|254780349|r 153 VRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHI 229 (433)
Q Consensus 153 ~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADv 229 (433)
|. -|.+.+++.++ .++|+|++.....| ...|+++++++|++.|+.+++|.. ++++.+++|+++ |||
T Consensus 111 -d~----~d~~~~~~~i~-~~t~li~~EspsNP~l~v~Di~~i~~~A~~~g~~~vvDNT-----~atp~~~~Pl~~GaDi 179 (369)
T cd00614 111 -DP----DDPEALEAAIK-PETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNT-----FATPYLQRPLELGADI 179 (369)
T ss_pred -CC----CCHHHHHHHCC-CCCEEEEEECCCCCCCEECCCHHHHHHHHHCCEEEEEECC-----CCCHHCCCHHHHCCCE
T ss_conf -78----78688997638-7850899965899970622729999999766717997477-----4312015857748968
Q ss_pred EEECCCCCCCCCC---CEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6740456522567---4489833620565016646543223445566689999999973564899999999888999999
Q gi|254780349|r 230 VTTTTHKSLRGPR---GGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKK 306 (433)
Q Consensus 230 vt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~ 306 (433)
|..|+.|.+.|-- ||.|.++++++++++..... ..|. .+.--.+-. .++- +. -...-.+|.-+||..+|+.
T Consensus 180 vv~S~TKy~~Ghsd~l~G~v~~~~~~~~~~l~~~~~--~~G~-~~sp~~a~l-~lrg-l~-TL~lRm~~~~~nA~~lA~~ 253 (369)
T cd00614 180 VVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRL--ALGT-ILSPFDAWL-LLRG-LK-TLPLRMERHSENALKVAEF 253 (369)
T ss_pred EEEECCCCCCCCCCEEEEEEEECHHHHHHHHHHHHH--HCCC-CCCHHHHHH-HHHC-CC-CHHHHHHHHHHHHHHHHHH
T ss_conf 999556312588775768998270888999999998--6457-689788899-8860-17-5999999999999999999
Q ss_pred HHHCC--CCCCCCCCC---C------------CEEEECCCCCCCCHHHHHHHHHHCCEEE
Q ss_conf 86168--523345888---9------------8126316655676799999888567188
Q gi|254780349|r 307 LQFLG--FDIVSGGTD---N------------HLMLVDLRSKRMTGKRAESILGRVSITC 349 (433)
Q Consensus 307 L~~~G--~~vv~ggTd---~------------H~vlvdl~~~~~~G~~a~~~Le~~gI~~ 349 (433)
|+++. -+|..-|=. . -++-++++. +-..+.+.++...+..
T Consensus 254 L~~hp~V~~V~yPgL~s~p~~~~~~~~~~g~ggl~sf~l~~---~~~~~~~f~~~l~lf~ 310 (369)
T cd00614 254 LEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG---GLEAAKKFLNALKLFS 310 (369)
T ss_pred HHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEECC---CHHHHHHHHHHCCCCE
T ss_conf 97199988797878988804899997689997177999769---8999999998589063
No 87
>PRK08068 transaminase; Reviewed
Probab=99.67 E-value=4.7e-13 Score=111.40 Aligned_cols=344 Identities=17% Similarity=0.140 Sum_probs=203.5
Q ss_pred HHHHHHHCHHHHHHHHHHHH-HH---HHCCCCCCCC--CCCCHHHHHHHHC----CCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 64697858999999999999-99---8388810430--1029899998305----1028865798887533600679999
Q gi|254780349|r 11 QQSLIESDPDVFSLIGQESC-RQ---NDEIQLIASE--NIVSRAVLEAQGS----ILTNKYAEGYPSKRYYGGCQYVDDI 80 (433)
Q Consensus 11 ~~~l~~~Dpei~~~i~~e~~-rq---~~~l~LiASE--N~~S~~v~~~l~S----~l~nkyaeG~pg~ryy~G~~~~d~i 80 (433)
++-++...+..+.-|.++.. ++ ++-|+|--.+ --+++.+++++.- .-+++|+. ..-..++
T Consensus 6 s~r~~~~~~~~~~~i~~~~~~~~~~G~~vi~l~~G~Pd~~~p~~i~~a~~~~~~~~~~~~Y~~----------~~G~~~L 75 (389)
T PRK08068 6 SKLLKQLPKQFFASLVAKVNKKVAEGHDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSP----------FRGYPFL 75 (389)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC----------CCCHHHH
T ss_conf 789764896789999999999996799918999988999989999999999973876788899----------8580999
Q ss_pred HHHHHHHHHHHCCCCC--E-ECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999998718863--0-100001679-99999998315487488123344841114766543333322013665832
Q gi|254780349|r 81 ENIAIERAKKLFNVNF--V-NVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKE 156 (433)
Q Consensus 81 E~la~~~a~~lF~a~~--a-nvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~ 156 (433)
-+-..+..++-+|.+. - +|-..+|++ |...++.+|++|||.|+..+...-++.. .+ .....+.+.++++++
T Consensus 76 R~aia~~~~~~~g~~~~p~~eI~vt~Ga~~al~~~~~al~~pGD~Vlv~~P~Yp~y~~---~~--~~~g~~~~~vpl~~~ 150 (389)
T PRK08068 76 KEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLLNPGDTALVPDPGYPDYLS---GV--ALARAQFETMPLIAE 150 (389)
T ss_pred HHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHH---HH--HHCCCEEEEEECCCC
T ss_conf 9999999999868998988809982788999999999966999989980788986499---99--971875689963666
Q ss_pred C-CCCCHHHHHHHHHHHCCCEEEEECCCCC--C---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCC-CCCCC---
Q ss_conf 3-5659899999998604667897055243--5---36379999886417978991862012443200012-32200---
Q gi|254780349|r 157 D-GLLDMHEIESLAIEYNPKLIIVGGTAYS--R---VWDWERFRSIADSIGAYLMADISHISGLVVGGQHP-SPVPH--- 226 (433)
Q Consensus 157 ~-~~ID~d~~~~~a~~~kPklIi~G~S~y~--~---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~-~Pl~~--- 226 (433)
+ ..+|++++++.+. .|+|+|++.....| . .-.++++.++|++.+.+++.|..+- .|+-.|..| +.+..
T Consensus 151 ~~~~~d~e~l~~~i~-~~tk~iil~~P~NPTG~v~~~~~l~~l~~la~~~~i~visDEiY~-~l~~~~~~p~s~l~~~~~ 228 (389)
T PRK08068 151 NNFLPDYEKIPESVA-EKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYG-AIGFDGQKPVSFLQTPGA 228 (389)
T ss_pred CCCCCCHHHHHHHCH-HCCEEEEECCCCCCCCHHCCHHHHHHHHHHHHCCCEEEEECCCCC-CEEECCCCCCCCCCCCCC
T ss_conf 798689999987431-046599988997984612059999999998710777999626521-114678766411036532
Q ss_pred CC--EEEECCCCCC--CCCCCEEEEECCCCHHHHCCH---HHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 23--5674045652--256744898336205650166---4654322344556668999999997356489999999988
Q gi|254780349|r 227 CH--IVTTTTHKSL--RGPRGGLIMTNHADLAKKINS---AIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLN 299 (433)
Q Consensus 227 AD--vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~---avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~N 299 (433)
.| |+..|.-|+| +|=|-|.+..++ ++.+++.. .++ .+.+..-+-|+ +.+|.. .....+.......++
T Consensus 229 ~~~~I~~~S~SK~~~~~G~RiG~~v~~~-~~i~~l~~~~~~~~---~~~~~~~q~aa-~~al~~-~~~~~~~~~~~~~~r 302 (389)
T PRK08068 229 KDVGIEIYTLSKTFNMAGWRVAFAVGNE-SVIEAINLLQDHLF---VSLFGAIQDAA-IEALLS-DQSCVQELVARYESR 302 (389)
T ss_pred CCCCEEEECCCCCCCCCCCEEEEEECCH-HHHHHHHHHCCCCE---ECCCHHHHHHH-HHHHHC-CHHHHHHHHHHHHHH
T ss_conf 0134066103565578631179997799-99999997302530---04784999999-999868-888999999999999
Q ss_pred HHHHHHHHHHCCCCCCC-CCCCCCEEEECCCCCCCCHHHH-HHHHHHCCEEEECCCCCCCCCCCCCC---CCCCCCCHHH
Q ss_conf 89999998616852334-5888981263166556767999-99888567188037899899998889---8512246667
Q gi|254780349|r 300 SQALAKKLQFLGFDIVS-GGTDNHLMLVDLRSKRMTGKRA-ESILGRVSITCNKNSIPFDPESPFIT---SGIRLGTPSG 374 (433)
Q Consensus 300 A~~La~~L~~~G~~vv~-ggTd~H~vlvdl~~~~~~G~~a-~~~Le~~gI~~Nkn~iP~D~~~~~~~---sGiRlGT~ai 374 (433)
...|.+.|.+.|+++.. .| .-.+|+|+. .+++..+. ...|+++|+.+. ||. .|-+ .-+||.-.
T Consensus 303 r~~~~~~l~~~g~~~~~P~G--~~y~w~~~~-~~~~~~~~~~~ll~~~gV~v~----PG~---~Fg~~g~~~vRl~fa-- 370 (389)
T PRK08068 303 RNAFISACREIGWEVDAPKG--SFFAWMPVP-KGYTSEQFADLLLEKAHVAVA----PGN---GFGEHGEGYVRVGLL-- 370 (389)
T ss_pred HHHHHHHHHHCCCEECCCCE--EEEEEEECC-CCCCHHHHHHHHHHCCCEEEE----CCH---HHCCCCCCEEEEEEE--
T ss_conf 99999999975976058881--359978689-998989999999970999998----785---437899696999983--
Q ss_pred HHCCCCHHHHHHHHHHHHH
Q ss_conf 3079998999999999999
Q gi|254780349|r 375 TTRGFKEKDFEYIGELIAQ 393 (433)
Q Consensus 375 TtrG~~e~em~~iA~li~~ 393 (433)
..++++++-.+-|.+
T Consensus 371 ----~~~e~l~ea~~RL~~ 385 (389)
T PRK08068 371 ----IDEERLREAINRIAK 385 (389)
T ss_pred ----CCHHHHHHHHHHHHH
T ss_conf ----899999999999972
No 88
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.66 E-value=7.4e-15 Score=123.92 Aligned_cols=213 Identities=21% Similarity=0.229 Sum_probs=152.0
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00679999999999999871886301000016799999999831548748812334484111476654333332201366
Q gi|254780349|r 73 GCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 73 G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
|+--++.+| ++..+|-|++.|-+- -||..|-.++++++++|||+|+..+--.||-... -. .....|+
T Consensus 56 ~nPT~~~le----~~la~LEg~~~a~~~-sSGmaAi~~~l~~ll~~Gd~iv~~~~~YggT~~l------~~--~~l~~~G 122 (386)
T PRK07811 56 GNPTRTALE----EQLAALEGGKYGRAF-SSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRL------ID--KVFTRWG 122 (386)
T ss_pred CCHHHHHHH----HHHHHHHCCCCEEEE-CCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH------HH--HHHHHCC
T ss_conf 886799999----999998499878983-3399999999999838999899378765219999------99--9987358
Q ss_pred CCCCCC-CCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CC
Q ss_conf 583235-659899999998604667897055243--53637999988641797899186201244320001232200-23
Q gi|254780349|r 153 VRKEDG-LLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CH 228 (433)
Q Consensus 153 ~d~~~~-~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-AD 228 (433)
++-.-- .-|.+++++.+ +.+.|+|++.....| ...|++++.+||++.|+++++|.. .|...+++|+++ ||
T Consensus 123 i~~~~vd~~d~~~~~~~i-~~~Tkli~~Esp~NP~l~v~Di~~i~~ia~~~g~~~vVDNT-----~atP~~~~Pl~~GaD 196 (386)
T PRK07811 123 VEYTPVDLSDLDAVRAAI-TPRTKLIWVETPTNPLLSITDIAAIAELAHDAGAKVVVDNT-----FASPYLQQPLALGAD 196 (386)
T ss_pred EEEEEECCCCHHHHHHHC-CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECC-----CCCCCEECHHHHCCC
T ss_conf 049977887878898655-88834999977999876405858999999855781883167-----335204252340798
Q ss_pred EEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHHC-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Q ss_conf 56740456522567---44898336205650166465-432234455666899999999735648999999998889999
Q gi|254780349|r 229 IVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAIF-PGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALA 304 (433)
Q Consensus 229 vvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~avf-Pg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La 304 (433)
||..|+.|.+.|-- ||.|.++++++.+++..... -|..-+|+- |-++ ++- ++ -...-.+|-.+||..+|
T Consensus 197 iVvhS~TKyl~GHsDvl~G~vv~~~~~~~~~~~~~~~~~G~~~sP~~---a~l~--lrG-L~-TL~lRm~~~~~nA~~lA 269 (386)
T PRK07811 197 VVLHSTTKYIGGHSDVVGGALVTNDEELDEEFAFLQNGAGAVPGPFD---AYLT--MRG-LK-TLAVRMDRHSENAEAVA 269 (386)
T ss_pred EEEEECCCEECCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCHHH---HHHH--HHH-HH-HHHHHHHHHHHHHHHHH
T ss_conf 79973444005787724247860828999999999974278788578---8899--865-73-69999999999999999
Q ss_pred HHHHHCC
Q ss_conf 9986168
Q gi|254780349|r 305 KKLQFLG 311 (433)
Q Consensus 305 ~~L~~~G 311 (433)
+.|.++.
T Consensus 270 ~~L~~hp 276 (386)
T PRK07811 270 EFLDGHP 276 (386)
T ss_pred HHHHCCC
T ss_conf 9997299
No 89
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.66 E-value=3.6e-15 Score=126.11 Aligned_cols=246 Identities=16% Similarity=0.097 Sum_probs=164.9
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHH
Q ss_conf 81043010298999983051028865798887533600679999999999999871886301000016799999999831
Q gi|254780349|r 37 QLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALM 116 (433)
Q Consensus 37 ~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl 116 (433)
+...|.+|..+.+.+...- -..-.+||-=.| -|+--.+.+| ++..+|-|++.|-+-+ ||..|-.+++++++
T Consensus 31 PIy~sst~~f~~~~~~~~~--~~~~~~~~~Y~R--~~nPT~~~lE----~~la~LEg~~~a~~~s-SGmaAi~~~ll~ll 101 (394)
T PRK07050 31 PVARASTVVFPDLATMRAL--DWRQDGQWRYGL--HATPTSLALA----QRLAEIEGGRHALLQP-SGLAAISNVYFGLV 101 (394)
T ss_pred CEECCCCCCCCCHHHHHHH--HCCCCCCCEEEC--CCCHHHHHHH----HHHHHHHCCCEEEEEC-CHHHHHHHHHHHHC
T ss_conf 8126875100887999863--358867962558--8886599999----9999982997499965-78999999999960
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHH
Q ss_conf 548748812334484111476654333332201366583235-659899999998604667897055243--53637999
Q gi|254780349|r 117 HPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDG-LLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERF 193 (433)
Q Consensus 117 ~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~-~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l 193 (433)
+|||+|+..+--.||-...-. . ....|+++-... ..|.+++++.+ +.+.|||++.....| +..|++++
T Consensus 102 ~~Gd~vv~~~~~Yg~T~~~~~--~------~l~~~Gi~v~f~d~~d~~~~~~~i-~~~Tkli~~Esp~NP~l~v~Di~~i 172 (394)
T PRK07050 102 KAGDDVLIPDNVYGPNRDFGE--W------LAKDFGITVRFYDPMIGAGIADLI-QPNTRLIWLEAPGSVTMEVPDVPAI 172 (394)
T ss_pred CCCCEEEECCCCCHHHHHHHH--H------HHHCCCEEEEEECCCCHHHHHHHC-CCCCEEEEEECCCCCCCEECCHHHH
T ss_conf 799857835666333899999--8------753188799997999989998436-8664499984489876254372999
Q ss_pred HHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHHCHHHHHHH
Q ss_conf 988641797899186201244320001232200-2356740456522567---448983362056501664654322344
Q gi|254780349|r 194 RSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAIFPGLQGGP 269 (433)
Q Consensus 194 ~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~avfPg~qg~~ 269 (433)
+++|++.|+++++|.. .++..+++|+++ ||||..|+.|.+.|-- +|.++++++++.+++..... .-|.
T Consensus 173 a~~A~~~g~~~vVDNT-----~atP~~~~Pl~~GaDiVihS~TKyi~GHsDvl~G~vv~~~~~~~~~l~~~~~---~~G~ 244 (394)
T PRK07050 173 TAAARARGVVTAIDNT-----WSAGLAFKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARM---RLGI 244 (394)
T ss_pred HHHHHHCCCEEEEECC-----CCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCEECCCHHHHHHHHHHHH---HCCC
T ss_conf 9999875986998578-----6686500631046989995066344378887677365699999999999998---6267
Q ss_pred HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 556668999999997356489999999988899999986168
Q gi|254780349|r 270 FMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLG 311 (433)
Q Consensus 270 ~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G 311 (433)
.+.-..+-.+. .- ++ -...-.+|-.+||..+|+.|.++-
T Consensus 245 ~~sp~~a~l~~-rG-L~-TL~lRm~r~~~nA~~lA~~L~~hp 283 (394)
T PRK07050 245 GVSADDCSLVL-RG-LP-SMQVRFDAHSRSALELAQWLKARP 283 (394)
T ss_pred CCCHHHHHHHH-CC-CC-CHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 78989999997-48-98-478889999999999999986189
No 90
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.66 E-value=5.2e-13 Score=111.10 Aligned_cols=356 Identities=17% Similarity=0.149 Sum_probs=204.2
Q ss_pred HHHHHHHCHHHHHHHHHH---HHH-HHHCCCCCCCC-CC-CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 646978589999999999---999-98388810430-10-2989999830510288657988875336006799999999
Q gi|254780349|r 11 QQSLIESDPDVFSLIGQE---SCR-QNDEIQLIASE-NI-VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIA 84 (433)
Q Consensus 11 ~~~l~~~Dpei~~~i~~e---~~r-q~~~l~LiASE-N~-~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la 84 (433)
.+.++...|-.+..+.+- .++ -++.|+|--.| ++ +++.|++++.-.+.+.-..|| .-..-..++-+-.
T Consensus 9 ~~r~~~~~~~~~~~~~~~a~~~~~~G~~vi~L~iG~Pd~~~P~~v~~a~~~al~~~~~~~Y------~~~~G~~~LReai 82 (394)
T PRK05942 9 ADRLQALPPYVFARLDELKARAREQGLDLIDLGMGNPDGAAPQPVIEAAIAALEDPQNHGY------PPFEGTASFRQAI 82 (394)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCC------CCCCCCHHHHHHH
T ss_conf 8997529999899999999999865998188859899998889999999999838888898------9976859999999
Q ss_pred HHHHHHHCCCCC--E-ECCCHHHH-HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CC
Q ss_conf 999998718863--0-10000167-9999999983154874881233448411147665433333220136658323-56
Q gi|254780349|r 85 IERAKKLFNVNF--V-NVQSHSGS-QMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-GL 159 (433)
Q Consensus 85 ~~~a~~lF~a~~--a-nvqp~SG~-~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~~ 159 (433)
.+..++-+|.+. - +|-+.+|+ .|...++.+|++|||.|+..+...-++.. .....| -+.+++++++++ ..
T Consensus 83 a~~~~~~~g~~~~p~~~v~vt~Ga~~al~~~~~al~~pGD~Vlv~~P~Yp~y~~---~~~~~g--~~~~~v~l~~~~~~~ 157 (394)
T PRK05942 83 TDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFR---GPLIAG--AQIYPIILKPENDWL 157 (394)
T ss_pred HHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH---HHHHCC--CEEEEEEECCCCCCC
T ss_conf 999999868988988759988888999999999957998989978888676899---999859--989999705876887
Q ss_pred CCHHHHHHHHHHHCCCEEEEECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCC-C--C-CC--
Q ss_conf 59899999998604667897055243-----536379999886417978991862012443200012322-0--0-23--
Q gi|254780349|r 160 LDMHEIESLAIEYNPKLIIVGGTAYS-----RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPV-P--H-CH-- 228 (433)
Q Consensus 160 ID~d~~~~~a~~~kPklIi~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl-~--~-AD-- 228 (433)
+|+|++++.+. .|.|+|++-....| -.-.++++.++|+++|.+++.|..+ ..|+-.|..|.++ . . .|
T Consensus 158 ~d~~~l~~~i~-~~tk~iil~~P~NPTG~v~~~e~l~~i~~~a~~~~i~vIsDEiY-~~l~~dg~~~~s~~~~~~~~~~~ 235 (394)
T PRK05942 158 IDLSSIPEEVA-QQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEILLVHDLCY-AELAFDGYQPTSLLEIPGAKDIG 235 (394)
T ss_pred CCHHHHHHHHH-CCCCEEEEECCCCCCCHHCCHHHHHHHHHHHHCCCCEEEECCCC-CCEEECCCCCCCHHHCCCCCCCC
T ss_conf 79999998611-26708999389881012201999999999885178679703741-00255687665576554653442
Q ss_pred EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5674045652--25674489833620565016646543223445566689999999973564899999999888999999
Q gi|254780349|r 229 IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKK 306 (433)
Q Consensus 229 vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~ 306 (433)
|+..|.-|+| +|=|-|.+..++ ++.+++.+..-....+.+...+.| ...++.. .....+...++.-++...|.+.
T Consensus 236 i~~~S~SK~~~~~G~RiG~ii~~~-~~i~~l~~~~~~~~~~~~~~~q~a-a~~al~~-~~~~~~~~~~~~~~rrd~l~~~ 312 (394)
T PRK05942 236 VEFHTLSKTYNMAGWRVGFVVGNR-DIIQGLRTLKTNLDYGIFSALQKA-AETALQL-PDSYLQQVQERYRQRRDFLIQG 312 (394)
T ss_pred EEECCCCCCCCCCCCCEEEEECCH-HHHHHHHHHHHHCCCCCCHHHHHH-HHHHHHC-CHHHHHHHHHHHHHHHHHHHHH
T ss_conf 166033345678774259986799-999999999985345767699999-9999858-4778999999999999999998
Q ss_pred HHHCCCCCCC-CCCCCCEEEECCCCCCCCHHHH-HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHH
Q ss_conf 8616852334-5888981263166556767999-9988856718803789989999888985122466673079998999
Q gi|254780349|r 307 LQFLGFDIVS-GGTDNHLMLVDLRSKRMTGKRA-ESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDF 384 (433)
Q Consensus 307 L~~~G~~vv~-ggTd~H~vlvdl~~~~~~G~~a-~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em 384 (433)
|.+.|+++.. .| +-.+|+++. .+++..+. .+.|+++|+.+. ||..=.+.-+.-+||.-. ..++++
T Consensus 313 L~~~g~~~~~p~g--~~y~w~~~~-~~~~~~~f~~~ll~~~gV~v~----PG~~Fg~~g~~~iRlsf~------~~~~~l 379 (394)
T PRK05942 313 LGELGWDIPPTKA--TMYLWVPCP-VGMGSTDFALNVLQKTGVVVT----PGNAFGEGGEGYVRISLI------ADCDRL 379 (394)
T ss_pred HHHCCCEECCCCE--EEEEEEECC-CCCCHHHHHHHHHHHCCEEEE----CCHHHCCCCCCEEEEEEE------CCHHHH
T ss_conf 9876967537885--889988689-997989999999984999998----873117899987999971------889999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999996
Q gi|254780349|r 385 EYIGELIAQIL 395 (433)
Q Consensus 385 ~~iA~li~~~L 395 (433)
++-.+-|.++.
T Consensus 380 ~ea~~Rl~~a~ 390 (394)
T PRK05942 380 GEALHRIKQAG 390 (394)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999999
No 91
>PRK07777 aminotransferase; Validated
Probab=99.66 E-value=2e-13 Score=113.98 Aligned_cols=316 Identities=16% Similarity=0.199 Sum_probs=197.2
Q ss_pred HHHHHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC--E-ECCCHHH
Q ss_conf 99983888104301--02989999830510288657988875336006799999999999998718863--0-1000016
Q gi|254780349|r 30 CRQNDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNF--V-NVQSHSG 104 (433)
Q Consensus 30 ~rq~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~--a-nvqp~SG 104 (433)
..+.+.|+|-..|- -+.|.+.++....+.. | ...|+-..-..++-+...+..++-+|.+. - +|-..+|
T Consensus 21 a~~~~~I~l~~G~Pd~~~p~~i~~a~~~a~~~----~---~~~Y~~~~G~~~LReaia~~~~~~~g~~~~pe~eI~vt~G 93 (386)
T PRK07777 21 AVRTGAVNLGQGFPDEDGPPEMLEAAQEAIAG----G---VNQYPPGPGIAPLRAAIAAQRRRRYGLEYDPDTEVLVTVG 93 (386)
T ss_pred HCCCCCEEECCCCCCCCCCHHHHHHHHHHHHC----C---CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCC
T ss_conf 57999889499789985689999999999862----8---9977998764999999999999981999999880998778
Q ss_pred H-HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCHHHHHHHHHHHCCCEEEEEC
Q ss_conf 7-999999998315487488123344841114766543333322013665832--3565989999999860466789705
Q gi|254780349|r 105 S-QMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKE--DGLLDMHEIESLAIEYNPKLIIVGG 181 (433)
Q Consensus 105 ~-~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~--~~~ID~d~~~~~a~~~kPklIi~G~ 181 (433)
+ .|...++.+|++|||.|+..+...-++.. .....| -+.++++++++ ...+|.|++++.+. .++|+|++-.
T Consensus 94 a~~al~~~~~~l~~pGD~Vlv~~P~y~~y~~---~~~~~g--~~~v~vpl~~~~~~~~~d~~~l~~~~~-~~tk~iil~~ 167 (386)
T PRK07777 94 ATEAIAAAVLGLVEPGDEVLLIEPYYDSYAA---VIAMAG--AHRVAVPLVPDGRGFALDVDALRAAVT-PRTRALIVNS 167 (386)
T ss_pred HHHHHHHHHHHHCCCCCEEEECCCCCCCHHH---HHHHHC--CEEEECCCCCCCCCCCCCHHHHHHHCC-CCCEEEEECC
T ss_conf 7999999999964899877634997787699---999838--925613434778884669699997468-7776999799
Q ss_pred CCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC------CCEEEECCCCCC--CCCCCEEEEE
Q ss_conf 5243-----53637999988641797899186201244320001232200------235674045652--2567448983
Q gi|254780349|r 182 TAYS-----RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH------CHIVTTTTHKSL--RGPRGGLIMT 248 (433)
Q Consensus 182 S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~------ADvvt~sTHKtl--~GPrgGiI~~ 248 (433)
...| -.-.++++.++|++.+.+++.|..+ ..|+-.+.-..|+.. -.|+.+|.-|+| +|=|-|.+..
T Consensus 168 P~NPTG~v~s~e~l~~l~~la~~~~i~ii~DE~Y-~~l~f~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~R~G~~v~ 246 (386)
T PRK07777 168 PHNPTGTVLSAAELAAIAELAVEHDLLVITDEVY-EHLVFDGARHLPLATLPGMAERTVTISSAAKTFNVTGWKIGWACG 246 (386)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCH-HHHCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEEE
T ss_conf 9698884888999999999986429788657537-752268877773654678657602431666766776622599985
Q ss_pred CCCCHHHHCCHHHC-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCEEEE
Q ss_conf 36205650166465-432234455666899999999735648999999998889999998616852334-5888981263
Q gi|254780349|r 249 NHADLAKKINSAIF-PGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVS-GGTDNHLMLV 326 (433)
Q Consensus 249 ~~~e~~~~i~~avf-Pg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~-ggTd~H~vlv 326 (433)
.+ ++.+++.+.-- -...++..+.. +.+.++.. .+.....+.+...++...|.+.|.+.|+.+.. .| ...+|+
T Consensus 247 ~~-~li~~~~~~~~~~~~~~~~~~Q~--a~~~al~~-~~~~~~~~~~~~~~rrd~~~~~L~~~g~~~~~p~G--~~f~~~ 320 (386)
T PRK07777 247 PA-PLIAAVRAAKQYLTYVGGAPFQP--AVAHALDH-EDAWVAALRDSLQAKRDRLAAGLAEAGFAVHDSAG--TYFLCA 320 (386)
T ss_pred CH-HHHHHHHHHHHHCCCCCCHHHHH--HHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCE--EEEEEE
T ss_conf 89-99999999998636758658999--99999868-75999999999999999999999976988717982--689988
Q ss_pred CCCCCC-CCHHHH-HHHHHHCCEEEECCCCCCCCCCCCCC------CCCCCCCH
Q ss_conf 166556-767999-99888567188037899899998889------85122466
Q gi|254780349|r 327 DLRSKR-MTGKRA-ESILGRVSITCNKNSIPFDPESPFIT------SGIRLGTP 372 (433)
Q Consensus 327 dl~~~~-~~G~~a-~~~Le~~gI~~Nkn~iP~D~~~~~~~------sGiRlGT~ 372 (433)
|+++.+ .++.++ .+.++++||.+- ||. .|-+ .-|||.-.
T Consensus 321 ~~~~~~~~d~~~f~~~L~~~~gV~v~----PG~---~F~~~~~~g~~~vRlsf~ 367 (386)
T PRK07777 321 DPRPLGYDDGTAFCRALPERVGVAAI----PMS---AFCDPADAWNHLVRFAFC 367 (386)
T ss_pred ECCCCCCCCHHHHHHHHHHHCCEEEE----CCH---HHCCCCCCCCCEEEEEEC
T ss_conf 66668999999999999986899998----874---428898778997999968
No 92
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.66 E-value=4.9e-13 Score=111.28 Aligned_cols=317 Identities=16% Similarity=0.184 Sum_probs=208.9
Q ss_pred CCCCCCCCCC--CCHHHHHHHHCCC------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-HCCCCCEECCCHHHH
Q ss_conf 8881043010--2989999830510------288657988875336006799999999999998-718863010000167
Q gi|254780349|r 35 EIQLIASENI--VSRAVLEAQGSIL------TNKYAEGYPSKRYYGGCQYVDDIENIAIERAKK-LFNVNFVNVQSHSGS 105 (433)
Q Consensus 35 ~l~LiASEN~--~S~~v~~~l~S~l------~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~-lF~a~~anvqp~SG~ 105 (433)
-|-|-+.||. +||.|++++...+ .|||-+ .+..+--+.+|.-...+ =+|...-||=..+||
T Consensus 28 ~IkL~~NENP~gpsp~~~~ai~~a~~~~~~~~nrYPd----------~~~~~Lr~alA~~l~~~~~~gv~~e~Ii~gnGS 97 (369)
T PRK03317 28 PVRLNTNENPYPPSPALVDDIARAVREAAAGLNRYPD----------RDAVALRTDLAAYLTAQTGVGLGVENVWAANGS 97 (369)
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC----------CCHHHHHHHHHHHHHHCCCCCCCHHHEEECCCH
T ss_conf 8660078899999999999999999976652472899----------748999999998750302679787787882689
Q ss_pred H-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 9-999999983154874881233448411147665433333220136658323565989999999860466789705524
Q gi|254780349|r 106 Q-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAY 184 (433)
Q Consensus 106 ~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y 184 (433)
. +-..++.++++|||+|+..+.....+-. .......+.++.+.+. +..+|.|++.+.+.+++||||++.....
T Consensus 98 dE~i~~i~~af~~pGd~vl~~~Ptf~~Y~~-----~a~~~g~~~v~v~~~~-df~~d~d~l~~ai~~~~~klv~l~nPNN 171 (369)
T PRK03317 98 NEILQQLLQAFGGPGRSALGFVPSYSMHPI-----IARGTHTEWVAAPRAA-DFGLDVDAAVAAIREHRPDVVFLTSPNN 171 (369)
T ss_pred HHHHHHHHHHHCCCCCEEEECCCCHHHHHH-----HHHHCCCEEEEECCCC-CCCCCHHHHHHHHHCCCCCEEEECCCCC
T ss_conf 999999999982899989974786027999-----9987097799936787-8883999999986326985899758999
Q ss_pred C--CCCCHHHHHHHHHHC-CCEEEECCCCHHHHHHHHCCCCCCCC----CC-EEEECCCC--CCCCCCCEEEEECCCCHH
Q ss_conf 3--536379999886417-97899186201244320001232200----23-56740456--522567448983362056
Q gi|254780349|r 185 S--RVWDWERFRSIADSI-GAYLMADISHISGLVVGGQHPSPVPH----CH-IVTTTTHK--SLRGPRGGLIMTNHADLA 254 (433)
Q Consensus 185 ~--~~~d~~~l~eIa~~~-ga~l~~D~aH~~GLIa~g~~~~Pl~~----AD-vvt~sTHK--tl~GPrgGiI~~~~~e~~ 254 (433)
| ..++.+++.+|++.. ..++++|.|- .-+. ..-.++.++. -. +|+-|.-| .|.|=|-|.++++. ++.
T Consensus 172 PTG~~~~~~~l~~i~~~~~~~~vvvDEAY-~ef~-~~~~~s~~~l~~~~~nlivlRTfSK~~gLAGlRlGy~ia~~-~~i 248 (369)
T PRK03317 172 PTGTALPLDDVEALLDAAPPGIVVVDEAY-AEFS-RQGTPSALTLLPGYPRLVVSRTMSKAFAFAGGRLGYLAAAP-AVI 248 (369)
T ss_pred CCCEECCHHHHHHHHHHCCCCEEEECCCH-HHHH-CCCCCCHHHHHHCCCCEEEEECCHHHHCCCCHHHEEEECCH-HHH
T ss_conf 87712378999999985887779943877-9861-56887667886137978999410586446653314100699-999
Q ss_pred HHCCHHHCHHHHHHHHHHHHHHHHH-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCC
Q ss_conf 5016646543223445566689999-999973564899999999888999999861685233458889812631665567
Q gi|254780349|r 255 KKINSAIFPGLQGGPFMHSIAAKAV-AFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRM 333 (433)
Q Consensus 255 ~~i~~avfPg~qg~~~~~~iaa~av-al~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~ 333 (433)
+.+++.--|. +.+.++..+. +..+ -..++....+++.+.-..|.+.|.+.|+++.. +++.-+|++...
T Consensus 249 ~~l~~~~~p~-----~vn~~a~~aa~aaL~-d~~~~~~~~~~i~~~R~~l~~~L~~lg~~v~p--S~aNFil~~~~~--- 317 (369)
T PRK03317 249 DALRLVRLPY-----HLSAVTQAAARAALR-HADETLASVAALRAERDRVVAWLRELGFRVAP--SDANFVLFGRFA--- 317 (369)
T ss_pred HHHHHHCCCC-----CCCHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC--CCCCEEEEECCC---
T ss_conf 9999844898-----867999999999974-99999999999999999999999978397888--988779996379---
Q ss_pred CHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 6799999888567188037899899998889851224666730799989999999999999602
Q gi|254780349|r 334 TGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 334 ~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
+...+.+.|.+.||.+-...+| +-+||.. -.++||+.+-+-+.++|..
T Consensus 318 ~~~~~~~~L~~~gIlVR~~g~~---------~~lRisi-------gt~een~~~l~al~~il~~ 365 (369)
T PRK03317 318 DAHAVWQRLLDRGVLIRDVGIP---------GWLRVTI-------GTPEENDAFLDALAEVLAT 365 (369)
T ss_pred CHHHHHHHHHHCCCEECCCCCC---------CCEEEEC-------CCHHHHHHHHHHHHHHHHC
T ss_conf 9999999999689689228998---------9379961-------9999999999999999722
No 93
>PRK07310 consensus
Probab=99.65 E-value=1.4e-12 Score=108.17 Aligned_cols=358 Identities=13% Similarity=0.151 Sum_probs=211.2
Q ss_pred HHHHHHHCHHHHHHHHHHHHH----HHHCCCCCCC-CCC-CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 646978589999999999999----9838881043-010-2989999830510288657988875336006799999999
Q gi|254780349|r 11 QQSLIESDPDVFSLIGQESCR----QNDEIQLIAS-ENI-VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIA 84 (433)
Q Consensus 11 ~~~l~~~Dpei~~~i~~e~~r----q~~~l~LiAS-EN~-~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la 84 (433)
.+-+....|...-.|.++..+ -++-|+|--. =++ +++.+.+++-..+.+-. ..||+-..-+.++-+-.
T Consensus 4 ~~r~~~~~~s~~~~i~~~a~~l~~~G~dvi~L~iG~pdf~~p~~i~~a~~~a~~~~~------~~~Y~~~~G~~~lR~Ai 77 (395)
T PRK07310 4 SKRVLEMEESVTLAAGARAKALKAQGRDILSLTLGEPDFVTPKNIQDAAIESIENGR------ASFYTVASGLPELKAAI 77 (395)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC------CCCCCCCCCHHHHHHHH
T ss_conf 068670996899999999999997799737768958999989999999999982898------88789974739999999
Q ss_pred HHHHHHHCCCC--CEECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC
Q ss_conf 99999871886--30100001679-999999983154874881233448411147665433333220136658323-565
Q gi|254780349|r 85 IERAKKLFNVN--FVNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-GLL 160 (433)
Q Consensus 85 ~~~a~~lF~a~--~anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~~I 160 (433)
.+..++-||.+ .-+|-..+|+. |...++.+|++|||.|+.++....++.. .....| -..+.++.+.++ ..+
T Consensus 78 a~~~~~~~g~~v~pd~I~vt~G~~~al~~~~~~l~~pGD~Vlv~~P~Y~~y~~---~~~~~g--~~~v~~~~~~~~~~~~ 152 (395)
T PRK07310 78 ATYFENFYGYHLSPNQIVVGTGAKFILYAFFMAVLNPGDEVIIPTPYWVSYSD---QVKMAE--GVPVFVQAKEENHFKV 152 (395)
T ss_pred HHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHH---HHHHCC--CEEEEEECCCCCCCCC
T ss_conf 99989987899883209987788999999999974999989983787754699---999759--9899975674457450
Q ss_pred CHHHHHHHHHHHCCCEEEEECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-------CC
Q ss_conf 9899999998604667897055243-----53637999988641797899186201244320001232200-------23
Q gi|254780349|r 161 DMHEIESLAIEYNPKLIIVGGTAYS-----RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-------CH 228 (433)
Q Consensus 161 D~d~~~~~a~~~kPklIi~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-------AD 228 (433)
|.|++++ +...++|++++-....| -.-.++++.++|.+++.+++.|..|- .|+-.|.-..|+.. --
T Consensus 153 d~~~l~~-~~~~~~k~iil~~P~NPTG~v~s~~~l~~l~~~a~~~~i~visDEiY~-~l~~~g~~~~p~~~~~~~~~~~~ 230 (395)
T PRK07310 153 TVEQLEA-ARTSKTKVVLLNSPSNPTGMIYSAEELRAIGEWAVEHDILILADDIYG-RLVYNGNQFTPISSLSEAIRKQT 230 (395)
T ss_pred CHHHHHH-HCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCE-EEECCCCCCCCHHHHHHHHCCCC
T ss_conf 4999997-465897499989997985626635414677655652687999436521-00148988888888412432573
Q ss_pred EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5674045652--25674489833620565016646543223445566689999999973564899999999888999999
Q gi|254780349|r 229 IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKK 306 (433)
Q Consensus 229 vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~ 306 (433)
|+.+|.-|+| +|=|-|.+..+ +++.+++.+.......+-+.+.+.|+.+ ++.+ .........+..-+|.+.+.+.
T Consensus 231 i~~~s~SK~f~~~G~RiG~~v~~-~~~i~~~~~~~~~~~~~~~~~~q~aa~~-al~~-~~~~~~~~~~~~~~r~~~~~~~ 307 (395)
T PRK07310 231 IVINGVSKTYAMTGWRVGFAVGE-PEIISAMSKIAGQTTSNLTAVSQYAAIE-AFTG-SQSSVEEMRLAFEERLNIIYPL 307 (395)
T ss_pred EEEECCCCCCCCCCCEEEEEECC-HHHHHHHHHHHHHHCCCCCHHHHHHHHH-HHHC-CHHHHHHHHHHHHHHHHHHHHH
T ss_conf 58840123567766548999779-9999999999865047813899999999-9968-8899999999999999999998
Q ss_pred HHHC-CCCCCCCCCCCCEEEECCCCC----CC-CHH-HHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCC
Q ss_conf 8616-852334588898126316655----67-679-9999888567188037899899998889851224666730799
Q gi|254780349|r 307 LQFL-GFDIVSGGTDNHLMLVDLRSK----RM-TGK-RAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGF 379 (433)
Q Consensus 307 L~~~-G~~vv~ggTd~H~vlvdl~~~----~~-~G~-~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~ 379 (433)
|.+. |+++.. -.-+-.+|+|+... +. +.. -+...|+++|+.++ ||.. -..+..+||.-. .
T Consensus 308 l~~~~g~~~~~-P~g~~~~w~~~~~~~~~~g~~d~~~~~~~ll~~~gV~v~----PG~~--FG~~~~vRl~~a------~ 374 (395)
T PRK07310 308 LAQVPGFEVVK-PQGAFYLFPNVKKAMEMKGYTDVTDFTTAILEEVGVALV----TGAG--FGAPENVRLSYA------T 374 (395)
T ss_pred HHCCCCCEEEC-CCEEEEEEEECCCHHCCCCCCCHHHHHHHHHHHCCEEEE----CCCC--CCCCCCEEEEEC------C
T ss_conf 73089968726-986689816665111247889899999999984999998----8976--699998899980------9
Q ss_pred CHHHHHHHHHHHHHHHHC
Q ss_conf 989999999999999602
Q gi|254780349|r 380 KEKDFEYIGELIAQILDG 397 (433)
Q Consensus 380 ~e~em~~iA~li~~~L~~ 397 (433)
.++.+++-.+-|.+.|++
T Consensus 375 ~~~~l~eal~RL~~~l~s 392 (395)
T PRK07310 375 DLETLKEAVRRLHVFMES 392 (395)
T ss_pred CHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999987
No 94
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.65 E-value=2.1e-14 Score=120.80 Aligned_cols=246 Identities=20% Similarity=0.217 Sum_probs=161.4
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00679999999999999871886301000016799999999831548748812334484111476654333332201366
Q gi|254780349|r 73 GCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 73 G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
|+--.+.+| ++..+|-|++.+-+ .-||+.|-.+++. +++|||+|+..+--.||-.. +... ..-.++
T Consensus 48 ~nPT~~~lE----~~la~LEg~~~a~~-~sSGmaAi~a~l~-~~~~Gd~iv~~~~~YggT~~------l~~~--~l~~~G 113 (377)
T PRK07671 48 GNPTRAALE----ELIAVLENGHAGFA-FGSGMAAITAVMM-LFSSGDHVILTDDVYGGTYR------VMTK--VLNRFG 113 (377)
T ss_pred CCHHHHHHH----HHHHHHHCCCEEEE-ECCHHHHHHHHHH-HHCCCCEEEECCCCCCCHHH------HHHH--HHHHCC
T ss_conf 886699999----99999839862775-1678899999999-86899989982898277899------9998--886369
Q ss_pred CCCCCC-CCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CC
Q ss_conf 583235-659899999998604667897055243--53637999988641797899186201244320001232200-23
Q gi|254780349|r 153 VRKEDG-LLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CH 228 (433)
Q Consensus 153 ~d~~~~-~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-AD 228 (433)
++-.-- .-|.+++++.+ +.+.|+|++.....| +..|++++++||++.|+.+++|.. .|...+++|+++ ||
T Consensus 114 i~v~fvd~~d~~~~~~ai-~~~Tklv~~EspsNP~l~v~Di~~ia~iA~~~g~~~vVDNT-----~atP~~~~Pl~~GaD 187 (377)
T PRK07671 114 IEHTFVDTTNLEEVEEAI-RPNTKAIYVETPTNPLLKITDIKKISTLAKEKGLLTIVDNT-----FMTPYWQSPISLGAD 187 (377)
T ss_pred CEEEEECCCCHHHHHHHC-CCCCEEEEEECCCCCCCEECCHHHHHHHHHHCCCEEEECCC-----CCCCCCCCHHHHCCC
T ss_conf 769994388868899647-88844999978999887501679999999982996985176-----422022787772887
Q ss_pred EEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHH-CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Q ss_conf 56740456522567---4489833620565016646-5432234455666899999999735648999999998889999
Q gi|254780349|r 229 IVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAI-FPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALA 304 (433)
Q Consensus 229 vvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~av-fPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La 304 (433)
||..|+.|-+.|-- ||.+.++++++++++...- .-|..-+|+ .+-.+ ++- +. -...-.++-.+||.++|
T Consensus 188 ivvhS~TKyl~GHsD~~~G~vv~~~~~~~~~~~~~~~~~G~~lsP~----~a~L~-lRG-L~-TL~lRm~r~~~nA~~vA 260 (377)
T PRK07671 188 IVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQ----DSFLL-LRG-LK-TLGIRMEEHETNSRAIA 260 (377)
T ss_pred EEEEECCCEECCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHH----HHHHH-HCC-CC-CHHHHHHHHHHHHHHHH
T ss_conf 8999457530478775252899677899999999998635778847----77898-706-88-69999999999999999
Q ss_pred HHHHHCCC--CCCCCCCCCC---------------EEEECCCCCCCCHHHHHHHHHHCCEEE
Q ss_conf 99861685--2334588898---------------126316655676799999888567188
Q gi|254780349|r 305 KKLQFLGF--DIVSGGTDNH---------------LMLVDLRSKRMTGKRAESILGRVSITC 349 (433)
Q Consensus 305 ~~L~~~G~--~vv~ggTd~H---------------~vlvdl~~~~~~G~~a~~~Le~~gI~~ 349 (433)
+.|.++.- +|..-|-.+| ++-+++. +...+.+.+++..+..
T Consensus 261 ~~L~~hp~V~~V~yPgL~s~p~h~la~~~~~g~gg~~sf~l~----~~~~a~~f~~~L~l~~ 318 (377)
T PRK07671 261 EFLNNHPKVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVG----SEETLNKVLERLQYFT 318 (377)
T ss_pred HHHHHCCCCCEEECCCCCCCCHHHHHHHCCCCCCEEEEEEEC----CHHHHHHHHHHCCCCE
T ss_conf 998619984499676888992599998558997559999938----7899999998088254
No 95
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.65 E-value=8.3e-15 Score=123.58 Aligned_cols=241 Identities=18% Similarity=0.198 Sum_probs=164.3
Q ss_pred HHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHH
Q ss_conf 999998718863010000167999999998315487488123344841114766543333-3220136658323565989
Q gi|254780349|r 85 IERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGK-WFKAIPYNVRKEDGLLDMH 163 (433)
Q Consensus 85 ~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~-~~~~~~y~~d~~~~~ID~d 163 (433)
.++..+|-|++++-+-+ ||..|-.++++++++|||+|+..+--.||-...-. .+..+ ..++..+ |. -|.+
T Consensus 59 e~~la~LEg~~~a~~~~-SGmaAis~~~l~ll~~Gd~iv~~~~~Yg~T~~l~~--~~l~~~gi~~~~~--d~----~d~~ 129 (388)
T PRK08861 59 EQALSELESGKGAVVTN-CGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFN--TRANKGDFKVLFV--DQ----SDAA 129 (388)
T ss_pred HHHHHHHHCCCCEEEEC-CHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHH--HHHHHCCEEEEEE--CC----CCCH
T ss_conf 99999984998379963-78999999999836899989986898550689999--8986288699998--99----9827
Q ss_pred HHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCCCCCCC
Q ss_conf 9999998604667897055243--53637999988641797899186201244320001232200-23567404565225
Q gi|254780349|r 164 EIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTHKSLRG 240 (433)
Q Consensus 164 ~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKtl~G 240 (433)
.+++.+ ..++|+|++..-..| +..|++++.+||++.|+.+++|..- |+..+++||++ ||||..|+.|-+.|
T Consensus 130 ~~~~~i-~~~Tkli~~EspsNP~l~v~Di~~i~~~A~~~g~~~vvDNT~-----atP~~~~Pl~~GaDivvhS~TKyi~G 203 (388)
T PRK08861 130 ALDAAL-AKKPKLILLETPSNPLVRVVDIAEVCQKAKQVGALVAVDNTF-----LTPVLQKPLELGADFVIHSTTKYING 203 (388)
T ss_pred HHHHHC-CCCCEEEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECCC-----CHHHHCCCHHCCCCEEEEECCCCCCC
T ss_conf 899734-878539998448999836656599999998739959997885-----12530372103887899962401258
Q ss_pred CC---CEEEEECCCCHHHHCCHHH-CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC--CC
Q ss_conf 67---4489833620565016646-543223445566689999999973564899999999888999999861685--23
Q gi|254780349|r 241 PR---GGLIMTNHADLAKKINSAI-FPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGF--DI 314 (433)
Q Consensus 241 Pr---gGiI~~~~~e~~~~i~~av-fPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~--~v 314 (433)
-- ||.+.++++++++++...- .-|...+|+-. -++ ++- ++ -...-.++..+||..+|+.|+++.. .|
T Consensus 204 HsDvlgG~vv~~~~~~~~~l~~~~~~~G~~~sP~~a---~l~--~RG-L~-TL~lRm~~~~~nA~~lA~~L~~hp~V~~V 276 (388)
T PRK08861 204 HSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDS---YMT--LRG-IR-TLGARMRVHEESAQEILKYLQTQSLVGTI 276 (388)
T ss_pred CCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHH---HHH--HCC-CC-CHHHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 887502189507488889999999851777886777---888--547-89-78899999998699999999849992789
Q ss_pred CCCC---CCCC------------EEEECCCCCCCCHHHHHHHHHHCCEEEE
Q ss_conf 3458---8898------------1263166556767999998885671880
Q gi|254780349|r 315 VSGG---TDNH------------LMLVDLRSKRMTGKRAESILGRVSITCN 350 (433)
Q Consensus 315 v~gg---Td~H------------~vlvdl~~~~~~G~~a~~~Le~~gI~~N 350 (433)
...| ...| ++-++++. +-..+.+.+++..+...
T Consensus 277 ~yPgL~shp~h~lak~~~~g~ggm~sf~l~~---~~~~~~~f~~~l~lf~~ 324 (388)
T PRK08861 277 YHPSLPEHPGHEIAKKQQSGFGSMLSFEFAG---SFEQLKVFVKALKLFSL 324 (388)
T ss_pred ECCCCCCCCCHHHHHHHCCCCCCEEEEEECC---CHHHHHHHHHHCCCCEE
T ss_conf 8989999926999986456986269999779---89999999983880533
No 96
>PRK03566 consensus
Probab=99.65 E-value=4e-13 Score=111.86 Aligned_cols=318 Identities=16% Similarity=0.183 Sum_probs=203.5
Q ss_pred HHCCCCCCCCCCC--CHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH-HHH
Q ss_conf 8388810430102--9899998305102886579888753360067999999999999987188630100001679-999
Q gi|254780349|r 33 NDEIQLIASENIV--SRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQ-MNQ 109 (433)
Q Consensus 33 ~~~l~LiASEN~~--S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~-An~ 109 (433)
++.|.|=+.||.. ||.|++++...+.+ ..-||.. ++.+ | ++...+.+|.+.-+|-..+|+. +-.
T Consensus 32 ~~~i~l~~NeNp~gp~~~v~~a~~~~~~~--~~~YPd~------~~~~----L-r~aiA~~~gv~~~~I~v~~Gs~e~i~ 98 (365)
T PRK03566 32 SDIVKLASNENPLGPSPKALEAIRAALSE--LHRYPDG------NGFE----L-KAALAEKLGVPPEQITLGNGSNDLLE 98 (365)
T ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHHHH--CCCCCCC------CHHH----H-HHHHHHHHCCCHHHEEECCCHHHHHH
T ss_conf 88788218899989899999999998886--1669596------6899----9-99999997848667998778999999
Q ss_pred HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CC
Q ss_conf 9999831548748812334484111476654333332201366583235659899999998604667897055243--53
Q gi|254780349|r 110 GVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RV 187 (433)
Q Consensus 110 av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~ 187 (433)
.++.++++|||+|+..+...+.+.. .....| ...+.++.+ +..+|++++.+.+ ..++|+|++.....| ..
T Consensus 99 l~~~a~~~pGd~Vl~~~P~y~~Y~~---~~~~~g--~~~~~vp~~--~~~~dl~~l~~~i-~~~~klv~l~nPnNPTG~~ 170 (365)
T PRK03566 99 LLARAFLGPGDEIIYSQYAFAVYPL---ATQAVG--ARAVEVPAK--DYGHDLEAMLAAI-TPKTRLVFIANPNNPTGTF 170 (365)
T ss_pred HHHHHHCCCCCEEEECCCCHHHHHH---HHHHCC--CEEEEECCC--CCCCCHHHHHHHC-CCCCCEEEECCCCCCCCCC
T ss_conf 9999855899876766886689999---999819--748996176--7676958899863-8888689977999988773
Q ss_pred CCHHHHHHHHHHC--CCEEEECCCCHHHHHHHHCCCCCCCC----CC-EEEECCCCCC--CCCCCEEEEECCCCHHHHCC
Q ss_conf 6379999886417--97899186201244320001232200----23-5674045652--25674489833620565016
Q gi|254780349|r 188 WDWERFRSIADSI--GAYLMADISHISGLVVGGQHPSPVPH----CH-IVTTTTHKSL--RGPRGGLIMTNHADLAKKIN 258 (433)
Q Consensus 188 ~d~~~l~eIa~~~--ga~l~~D~aH~~GLIa~g~~~~Pl~~----AD-vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~ 258 (433)
++-+++.++++.+ ..+++.|.+. ..++-.+.+++++.. -+ ||+.|.-|++ +|=|=|.++++. ++.++++
T Consensus 171 ~~~~~l~~l~~~~~~~~~vV~DEaY-~ef~~~~~~~~~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~ia~~-~li~~l~ 248 (365)
T PRK03566 171 LSAAELEAFLAKVPPDVLVVLDEAY-TEYAAPEERPDSLAWLKKYPNLVVSRTFSKAYGLAGLRVGYAVSNP-EIADLLN 248 (365)
T ss_pred CCCHHHHHHHHHCCCCCEEEEECCH-HHHCCCCCCCCHHHHHHHCCCEEEEEECCHHCCCCCHHHEEEECCH-HHHHHHH
T ss_conf 5706589999754567449852457-7750477777788876413772598545452057573014101699-9999999
Q ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHH
Q ss_conf 64654322344556668999999997356489999999988899999986168523345888981263166556767999
Q gi|254780349|r 259 SAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRA 338 (433)
Q Consensus 259 ~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a 338 (433)
+..-|...++ +.+.|+.+ +|. -+...+...+.+.++-+.|.+.|.+.|++++.. +...+|+++. .++.+.
T Consensus 249 ~~~~p~~vn~--~aq~aa~a-aL~--~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~ps--~~nF~l~~~~---~~~~~l 318 (365)
T PRK03566 249 RVRQPFNVNS--LALAAAVA-ALD--DDDFLAKSRELNRAGMQQLEAGFDALGLEYIPS--KGNFVTVDVG---RDAAAI 318 (365)
T ss_pred HHCCCCCCCH--HHHHHHHH-HHC--CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC--CCEEEEEECC---CCHHHH
T ss_conf 9618889779--99999999-958--999999999999989999999999787988789--9808999789---999999
Q ss_pred HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9988856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 339 ESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 339 ~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
.+.|.+.||.+- |+..- ..+.-+||+. -.++|++.+-+-+.++|+
T Consensus 319 ~~~L~~~gV~Vr----p~~~f--gl~~~lRis~-------g~~een~~l~~aL~~il~ 363 (365)
T PRK03566 319 YQALLRQGVIVR----PVAGY--GMPNHLRVSI-------GLPEENARFLAALKKVLA 363 (365)
T ss_pred HHHHHHCCEEEE----ECCCC--CCCCEEEEEE-------CCHHHHHHHHHHHHHHHC
T ss_conf 999997791898----68989--9989799995-------899999999999999876
No 97
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.65 E-value=2.2e-14 Score=120.66 Aligned_cols=308 Identities=14% Similarity=0.186 Sum_probs=181.3
Q ss_pred CCCCCCHHHHHHHHHHHC-HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 976520367764697858-9999999999999983888104301029899998305102886579888753360067999
Q gi|254780349|r 1 MTIICKNRFFQQSLIESD-PDVFSLIGQESCRQNDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDD 79 (433)
Q Consensus 1 m~~~~~~~~~~~~l~~~D-pei~~~i~~e~~rq~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~ 79 (433)
|+.+.+-+|-.+.++.-. |+ .....-.-+...|..|.-+.+.+.. ..+.++. +||-=.| .|+--.+.
T Consensus 1 m~~~k~~~f~T~~vH~g~~~~--------~~~gav~~PI~~sstf~f~~~~~~~-~~~~~~~-~~~~YsR--~~nPT~~~ 68 (399)
T PRK06234 1 MENIKKMGFATKAIHGGHIGD--------NQFGSLATPIYQTSTFIFDSAEQGG-RRFAGEE-SGYIYTR--LGNPTSTE 68 (399)
T ss_pred CCCCCCCCHHHHHEECCCCCC--------CCCCCEECCCCCCCCEECCCHHHHH-HHHCCCC-CCCEECC--CCCHHHHH
T ss_conf 997566982054140798888--------8999921882077774218889998-7616886-7852429--98867999
Q ss_pred HHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999998718863010000167999999998315487488123344841114766543333322013665832356
Q gi|254780349|r 80 IENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGL 159 (433)
Q Consensus 80 iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ 159 (433)
+| ++..+|-|++.|-+- -||..|-.++++++++|||+|+..+--.||-...-.. .+...+.++.. +|+
T Consensus 69 lE----~~la~LEgg~~a~~~-sSGmaAi~~~l~~~l~~Gdhiv~~~~~YGgT~~l~~~-~l~~~Gi~~~~--vd~---- 136 (399)
T PRK06234 69 VE----NKLALLEGGEAAVVA-ASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNH-GLTRYGVEVTF--VDT---- 136 (399)
T ss_pred HH----HHHHHHHCCCEEEEE-CCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHH-HHHCCCEEEEE--ECC----
T ss_conf 99----999998399759984-5889999999999718999899758872048999998-86516857886--268----
Q ss_pred CCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHC-CCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCC
Q ss_conf 59899999998604667897055243--536379999886417-97899186201244320001232200-235674045
Q gi|254780349|r 160 LDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSI-GAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTH 235 (433)
Q Consensus 160 ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~-ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTH 235 (433)
-|.+++++.++ .+.|+|++.....| ...|++.+.+||++. |+++++|.. .|...+++||++ ||||..|+.
T Consensus 137 ~d~~~~~~ai~-~~Tklv~~Etp~NP~l~v~Di~~ia~iA~~~~g~~~vvDNT-----~atP~~~~Pl~~GaDivihS~T 210 (399)
T PRK06234 137 SNLEEVRNALK-ANTKVVYLETPANPNLKVTDIKAISNIAHENKECLVFVDNT-----FCTPYIQRPLQLGADVVVHSAT 210 (399)
T ss_pred CCHHHHHHHCC-CCCEEEEEECCCCCCCEECCCHHHHHHHHHCCCCEEEEECC-----CCCCCCCCCCCCCCCEEEEECC
T ss_conf 89699996478-88449999789998866148589999876557976872589-----7761446740048978998256
Q ss_pred CCCCCCC---CEEEEECCCCHHHHCCH-HH--CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6522567---44898336205650166-46--543223445566689999999973564899999999888999999861
Q gi|254780349|r 236 KSLRGPR---GGLIMTNHADLAKKINS-AI--FPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQF 309 (433)
Q Consensus 236 Ktl~GPr---gGiI~~~~~e~~~~i~~-av--fPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~ 309 (433)
|.+.|-- ||.|.+++ ++.+++.. .+ +-|..-+|+ .+-.+ ++- ++ -...-.+|-.+||.++|+.|.+
T Consensus 211 Kyi~GHsD~l~G~v~~~~-~~~~~~r~~~~~~~~G~~l~p~----~a~l~-lrG-L~-TL~lR~~r~~~nA~~lA~~L~~ 282 (399)
T PRK06234 211 KYLNGHGDVIAGFVVGKE-EFINQVKLFGVKDMTGSVIGPF----EAFLI-IRG-MK-TLQIRMEKHCKNAMEVAEFLEK 282 (399)
T ss_pred CEECCCCCCEEEEEECCH-HHHHHHHHHHHHHHCCCCCCHH----HHHHH-HCC-CC-CHHHHHHHHHHHHHHHHHHHHH
T ss_conf 310588771546996559-9999999999887018868878----88998-624-67-4999999999999999999984
Q ss_pred CCC--CCCCCCCCC---------------CEEEECCCCCCCCHHHHHHHHHHCCEEE
Q ss_conf 685--233458889---------------8126316655676799999888567188
Q gi|254780349|r 310 LGF--DIVSGGTDN---------------HLMLVDLRSKRMTGKRAESILGRVSITC 349 (433)
Q Consensus 310 ~G~--~vv~ggTd~---------------H~vlvdl~~~~~~G~~a~~~Le~~gI~~ 349 (433)
+-- .|..-|-.+ -++-++++. +-..+.+.++...+..
T Consensus 283 hp~V~~V~yPgL~shp~h~lak~~~~g~gg~~sf~l~~---~~~~~~~f~~~l~lf~ 336 (399)
T PRK06234 283 HPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKG---GVEEGKVLMNNVKLAT 336 (399)
T ss_pred CCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECC---CHHHHHHHHHHCCCCE
T ss_conf 89847798989889946899997678999636888569---7999999998188464
No 98
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.65 E-value=1.5e-12 Score=107.80 Aligned_cols=355 Identities=17% Similarity=0.198 Sum_probs=206.1
Q ss_pred HHHHHCHHHHHHHHHH----HHHHHHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 6978589999999999----999983888104301--0298999983051028865798887533600679999999999
Q gi|254780349|r 13 SLIESDPDVFSLIGQE----SCRQNDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIE 86 (433)
Q Consensus 13 ~l~~~Dpei~~~i~~e----~~rq~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~ 86 (433)
.|+...+-++.-|.+. ...-++-|+|--.+- .+++.+.+++...+.+-...||+ -..-..++-+-..+
T Consensus 9 r~~~l~~~~~~~~~~~~~~~~~~G~~vi~l~iG~Pd~~~P~~i~~a~~~a~~~~~~~gY~------~~~G~~eLR~aia~ 82 (403)
T PRK08636 9 KIKRLPKYVFAEVNELKMAARRAGEDVIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYS------VSKGIYKLRLAICN 82 (403)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC------CCCCHHHHHHHHHH
T ss_conf 787499988999999999998659986889796899987999999999997699887899------97472999999999
Q ss_pred HHHHHCCCCC--E-ECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 9998718863--0-100001679-99999998315487488123344841114766543333322013665832356598
Q gi|254780349|r 87 RAKKLFNVNF--V-NVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDM 162 (433)
Q Consensus 87 ~a~~lF~a~~--a-nvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~ 162 (433)
..++-||.+. - +|-..+|+. |...++.+|++|||.|+..+...-.+.. .....|.....++...+ ++..+|.
T Consensus 83 ~~~~~~g~~~~p~~~I~vt~Ga~~al~~~~~al~~pGD~Vli~~P~Y~~y~~---~~~~~g~~~~~~~l~~~-~~~~~d~ 158 (403)
T PRK08636 83 WYKRKYNVDLDPDTEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQ---AFILAGGNVHKMPLEYN-EDFELDE 158 (403)
T ss_pred HHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHH---HHHHCCCEEEEEECCCC-CCCCCCH
T ss_conf 9999709999998749991798999999999977999989977888703899---99984996899743357-7742466
Q ss_pred HH----HHHHHHHH--CCCEEEEECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHH-CCCCCCCC---C
Q ss_conf 99----99999860--4667897055243-----536379999886417978991862012443200-01232200---2
Q gi|254780349|r 163 HE----IESLAIEY--NPKLIIVGGTAYS-----RVWDWERFRSIADSIGAYLMADISHISGLVVGG-QHPSPVPH---C 227 (433)
Q Consensus 163 d~----~~~~a~~~--kPklIi~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g-~~~~Pl~~---A 227 (433)
+. +++.+++. |+|+||+-....| -.-.++++.++|++.+.+++.|..|- .|+-.| .+|+.+.. -
T Consensus 159 ~~~~~~le~~~~~~~~ktk~iiln~P~NPTG~v~s~~~l~~i~~la~~~~i~visDEiY~-~l~~~g~~~~s~~~~~~~~ 237 (403)
T PRK08636 159 DKFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYA-DITFDGYKTPSILEVEGAK 237 (403)
T ss_pred HHHHHCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHH-HEEECCCCCCCCCCCCCCC
T ss_conf 652025899876268871799989998998878899999999999986593899626400-0001798787410275300
Q ss_pred C--EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Q ss_conf 3--5674045652--25674489833620565016646543223445566689999999973564899999999888999
Q gi|254780349|r 228 H--IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQAL 303 (433)
Q Consensus 228 D--vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~L 303 (433)
| |..+|.-|+| +|=|-|.+..++ ++.+++.+..-....+.+...++|+. +++.+ ......+..+..-++...|
T Consensus 238 ~~~i~~~s~SK~~~~~G~RiG~ii~~~-~li~~~~~~~~~~~~~~~~~~q~aa~-~al~~-~~~~~~~~~~~y~~rr~~l 314 (403)
T PRK08636 238 DVAVESYTLSKSYNMAGWRVGFVVGNK-KLIGALKKIKSWLDYGMFTPIQVAAT-IALDG-DQSCVEEIRETYEKRRDVL 314 (403)
T ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCH-HHHHHHHHHHHHCCCCCCHHHHHHHH-HHHHC-CHHHHHHHHHHHHHHHHHH
T ss_conf 133222442002577641289997399-99999999998634685689999999-99839-8999999999999999999
Q ss_pred HHHHHHCCCCCCC-CCCCCCEEEECCCC--CCCCHHH-HHHHHHHCCEEEECCCCCCCCCCCCCCCC---CCCCCHHHHH
Q ss_conf 9998616852334-58889812631665--5676799-99988856718803789989999888985---1224666730
Q gi|254780349|r 304 AKKLQFLGFDIVS-GGTDNHLMLVDLRS--KRMTGKR-AESILGRVSITCNKNSIPFDPESPFITSG---IRLGTPSGTT 376 (433)
Q Consensus 304 a~~L~~~G~~vv~-ggTd~H~vlvdl~~--~~~~G~~-a~~~Le~~gI~~Nkn~iP~D~~~~~~~sG---iRlGT~aiTt 376 (433)
.+.|.+.|+.+.. .|+ -.+|+++.. .+++..+ +.+.|+++|+.+. || +.|-.+| +||.-.
T Consensus 315 ~~~l~~~g~~~~~P~g~--~y~w~~l~~~~~~~~~~ef~~~ll~~~gV~v~----PG---~~Fg~~g~~~vRisf~---- 381 (403)
T PRK08636 315 IKSFENAGWELQKPRAS--MFVWAKIPEPFRHLGSLEFSKQLLTEAKVAVS----PG---IGFGEYGDEYVRIALI---- 381 (403)
T ss_pred HHHHHHCCCEECCCCCE--EEEEEECCCCCCCCCHHHHHHHHHHCCCEEEE----CC---HHHCCCCCCEEEEEEC----
T ss_conf 99998659700378810--38978787544789989999999974979998----87---5328899987999971----
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q ss_conf 79998999999999999960
Q gi|254780349|r 377 RGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 377 rG~~e~em~~iA~li~~~L~ 396 (433)
-.++.+++-.+-|.+.|+
T Consensus 382 --~~~e~l~ea~~Rl~~~l~ 399 (403)
T PRK08636 382 --ENENRIRQAARNIKKFLK 399 (403)
T ss_pred --CCHHHHHHHHHHHHHHHH
T ss_conf --899999999999999999
No 99
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein; InterPro: IPR010969 This entry describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulphurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N terminus. The function of members of this family are unknown..
Probab=99.65 E-value=1.6e-13 Score=114.69 Aligned_cols=331 Identities=19% Similarity=0.288 Sum_probs=216.3
Q ss_pred CCCCC-CHHHHHHHHCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHCCCCC-EECCC-HHHHHHHHHHHHH-H
Q ss_conf 30102-98999983051028865798887-5336006799999999999998718863-01000-0167999999998-3
Q gi|254780349|r 41 SENIV-SRAVLEAQGSILTNKYAEGYPSK-RYYGGCQYVDDIENIAIERAKKLFNVNF-VNVQS-HSGSQMNQGVFLA-L 115 (433)
Q Consensus 41 SEN~~-S~~v~~~l~S~l~nkyaeG~pg~-ryy~G~~~~d~iE~la~~~a~~lF~a~~-anvqp-~SG~~An~av~~A-L 115 (433)
...|+ ++.|.+++.-.+.+ |. |-||+ ||-.-.+-.-.|++ +++..++||+++- ++|-. .+-+.|-=.++.+ +
T Consensus 7 ATtyPKP~ev~~a~~~~~~~-~g-g~~gRG~~~~~l~~~~~v~E-tR~~lA~Lf~~~~~~~v~Ft~nAT~aLN~~L~Gl~ 83 (384)
T TIGR01977 7 ATTYPKPDEVYEAMADFLKN-YG-GSPGRGRYRLALRASREVEE-TRELLAKLFNAPSKAHVVFTNNATTALNIALKGLI 83 (384)
T ss_pred CCCCCCHHHHHHHHHHHHHH-CC-CCCCCCCCHHHHHCCCHHHH-HHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCC
T ss_conf 56899738999999999873-48-75688875034541422889-99999998488974627840607799999984330
Q ss_pred HC--CCCEEEECCCCCCCCCCCCCCCCC-CCC--CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEE-CCCC-CCCC
Q ss_conf 15--487488123344841114766543-333--322013665832356598999999986046678970-5524-3536
Q gi|254780349|r 116 MH--PGDSFMGLSLDSGGHLTHGSSVNM-SGK--WFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVG-GTAY-SRVW 188 (433)
Q Consensus 116 l~--pGD~Il~~~l~~GGHlshg~~~~~-~g~--~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G-~S~y-~~~~ 188 (433)
+| +||+|++-+++| =|-.++... .-+ ..+.--...++ +|.||.|++.+.++..|||+||+- .|.- .-..
T Consensus 84 lknr~g~hVi~t~mEH---NsV~RPL~~L~~~~~g~~~~iv~~~~-~G~~~~e~i~~~~~~~kTk~iv~~HaSNV~G~il 159 (384)
T TIGR01977 84 LKNREGDHVITTPMEH---NSVLRPLEKLKEERIGVEITIVKCDN-EGLISPERIKRAIKKNKTKLIVVSHASNVTGTIL 159 (384)
T ss_pred CCCCCCCCEEECCCCH---HHHHHHHHHHHHCCCCEEEEEECCCC-CCCCCHHHHHHHCCCCCCCEEEEECHHHHCCCCC
T ss_conf 0055999678647602---36643899997359975899862788-8521679999853378830043220030103112
Q ss_pred CHHHHH-HHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC----CCEEEECCCCCCCCCCC--EEEEECCCCHHHHCCHHH
Q ss_conf 379999-88641797899186201244320001232200----23567404565225674--489833620565016646
Q gi|254780349|r 189 DWERFR-SIADSIGAYLMADISHISGLVVGGQHPSPVPH----CHIVTTTTHKSLRGPRG--GLIMTNHADLAKKINSAI 261 (433)
Q Consensus 189 d~~~l~-eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~----ADvvt~sTHKtl~GPrg--GiI~~~~~e~~~~i~~av 261 (433)
|++++. ++|++.|..+++|+||++|++ |++- -|++-++-||+|-|||| |+++. | .+.+-+ .-+
T Consensus 160 piEEIgR~lA~e~g~~~~~DAaQtAGv~-------~Id~~~~~i~~lAF~GHKgLlGP~GtGGl~~~-e-~~~~~l-~pl 229 (384)
T TIGR01977 160 PIEEIGRELAKENGIFFILDAAQTAGVI-------PIDMEELAIDMLAFTGHKGLLGPQGTGGLIIK-E-GIKEIL-KPL 229 (384)
T ss_pred CHHHHHHHHHHHCCCEEEEECCCCCCCC-------HHCCCHHHCCEEEECCCHHHHCCCCCEEEEEE-C-CHHHHH-HHH
T ss_conf 5789999999867973998320003754-------10103220676763775220011363157887-3-705674-532
Q ss_pred CHH-------------------HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCC-CCCC
Q ss_conf 543-------------------22344556668999999997356489999999988899999986-16852334-5888
Q gi|254780349|r 262 FPG-------------------LQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQ-FLGFDIVS-GGTD 320 (433)
Q Consensus 262 fPg-------------------~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~-~~G~~vv~-ggTd 320 (433)
+-| ..|.-..--|+||--+.++...-.-..-.+.=+.+.+.|-+.|. ..-.+|.+ .--.
T Consensus 230 ~~GGTGs~S~~~~~P~~~PdrfE~GTLN~pGI~gL~agik~~~~~gi~~i~~kE~~l~~~l~~~L~~~~~V~iyG~~d~~ 309 (384)
T TIGR01977 230 KSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKELKLTEKLLNGLKEIKKVKIYGPKDPA 309 (384)
T ss_pred CCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHH
T ss_conf 06887545344457760432011440037999999888788756447789999999999998740167806762770343
Q ss_pred CCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCC---CC--CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 98126316655676799999888567188037899899---99--88898512246667307999899999999999
Q gi|254780349|r 321 NHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDP---ES--PFITSGIRLGTPSGTTRGFKEKDFEYIGELIA 392 (433)
Q Consensus 321 ~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~---~~--~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~ 392 (433)
+-.=+|-++=.|+|-..++..|++..=|+-|+++=.=| +. -+.+.=||+++.+.|| ++|++++-+.|.
T Consensus 310 ~~~~vvSf~~~g~d~~~va~~L~~~~~I~~RtGlHCAPLAH~~~GT~~~Gt~R~S~gyFnt----~ee~~~l~~al~ 382 (384)
T TIGR01977 310 KRVGVVSFTVEGIDSEEVADILDEKFDIAVRTGLHCAPLAHKTIGTFATGTIRLSLGYFNT----EEEIEKLVEALS 382 (384)
T ss_pred HCCCEEEEEECCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCCCEEEEECCCCCC----HHHHHHHHHHHH
T ss_conf 3267589983488877899999861891897676664123035311676538872787788----899999999985
No 100
>PRK07324 transaminase; Validated
Probab=99.65 E-value=1e-13 Score=116.03 Aligned_cols=276 Identities=20% Similarity=0.188 Sum_probs=172.0
Q ss_pred CCCCEECCCHHHH-HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHH
Q ss_conf 8863010000167-9999999983154874881233448411147665433333220136658323-5659899999998
Q gi|254780349|r 93 NVNFVNVQSHSGS-QMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-GLLDMHEIESLAI 170 (433)
Q Consensus 93 ~a~~anvqp~SG~-~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~~ID~d~~~~~a~ 170 (433)
+...-||-..+|+ .|+..++.+|++|||+|+..++..-++.+ .....+-++..+++++++ ..+|.++++++++
T Consensus 77 ~v~~d~IlvT~Ga~~Al~l~~~~l~~pGD~Viv~~P~Y~~~~~-----~~~~~G~~v~~~~l~~~~~~~~Dl~~l~~~i~ 151 (373)
T PRK07324 77 NVKPDNILQTNGATGANHLVLYALIEPGDHVISVYPTYQQLYD-----IPESLGAEVDYWKLREENGWLPDLDELKRLVR 151 (373)
T ss_pred CCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH-----HHHHCCCEEEECCCCCCCCCCCCHHHHHHHCC
T ss_conf 9986788986878999999999975999989988998577999-----99983987654076722598879999996188
Q ss_pred HHCCCEEEEECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCC--CCC
Q ss_conf 604667897055243-----53637999988641797899186201244320001232200--235674045652--256
Q gi|254780349|r 171 EYNPKLIIVGGTAYS-----RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSL--RGP 241 (433)
Q Consensus 171 ~~kPklIi~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl--~GP 241 (433)
.+.|+|++-....| -.-.++++.++|.++|.+++.|..+ .+|.-.+.+++..+. --|+++|.-|+| +|=
T Consensus 152 -~~tkliil~nP~NPTG~v~s~e~l~~l~~la~~~~i~iisDEiY-~~l~~~~~~~s~~~~~~~~I~~~S~SK~~~l~Gl 229 (373)
T PRK07324 152 -PNTKLICINNANNPTGALMDRAFLEEIVEIAKSVDAYVLSDEVY-RPLDEEGSFPSIADLYEKGISTNSLSKTYSLPGI 229 (373)
T ss_pred -CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCC-CCCCCCCCCCHHHHHHHCEEEECCCCCCCCCCCC
T ss_conf -78769997999798897788999999998754178599812554-2235797501056575575897154112567774
Q ss_pred CCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHH-HHHHHHHHHHHCHHHHH-HHHHHHHHHHHHHHHHHHC-CCCCC--C
Q ss_conf 744898336205650166465432234455666-89999999973564899-9999998889999998616-85233--4
Q gi|254780349|r 242 RGGLIMTNHADLAKKINSAIFPGLQGGPFMHSI-AAKAVAFGEALSSEFRD-YAKQIVLNSQALAKKLQFL-GFDIV--S 316 (433)
Q Consensus 242 rgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~i-aa~aval~Ea~~~~f~~-Ya~qvv~NA~~La~~L~~~-G~~vv--~ 316 (433)
|-|.|.+++ ++.+++.+.---.+.+...+.+. |..+. .. . ..+.+ ..+.+-+|-+.|.+.+... ++..+ .
T Consensus 230 RiGwiv~~~-~li~~~~~~~~~~~i~~~~~~~~~a~~al--~~-~-~~~l~~~~~~~~~n~~~l~~~l~~~~~~~~~~P~ 304 (373)
T PRK07324 230 RVGWIATNE-EVIDIFRKYRDYTMICAGVFDDMLASLAL--EH-R-DAILERNRKIVRTNLAILDEWVAKEPRVSYVKPK 304 (373)
T ss_pred EEEEEECCH-HHHHHHHHHHHHCCCCHHHHHHHHHHHHH--HC-H-HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
T ss_conf 379996699-99999999986535566569999999999--68-3-9999999999999999999999738885376358
Q ss_pred CCCCCCEEEECCCCCCCCHHH-HHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 588898126316655676799-9998885671880378998999988898512246667307999899999999999996
Q gi|254780349|r 317 GGTDNHLMLVDLRSKRMTGKR-AESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 317 ggTd~H~vlvdl~~~~~~G~~-a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
||+ .+|+++. .+.+..+ +.+.|++.|+.+. ||..= ..+..+||+-. ..++.+++--+.|.++|
T Consensus 305 gg~---~~~~~~~-~~~~~~~~~~~ll~~~gV~v~----PG~~F--~~~g~~Ri~fa------~~~~~l~egl~RL~~~l 368 (373)
T PRK07324 305 AVS---TSFIKLD-VDMDSEEFCEKLLKETGVLLV----PGNRF--DLEGHVRIGYC------CDTKTLKKGLKKLSEFL 368 (373)
T ss_pred CCE---EEEEECC-CCCCHHHHHHHHHHHCCEEEE----CCCCC--CCCCEEEEEEE------CCHHHHHHHHHHHHHHH
T ss_conf 614---7998789-998999999999996899997----48865--89994999981------98999999999999999
Q ss_pred H
Q ss_conf 0
Q gi|254780349|r 396 D 396 (433)
Q Consensus 396 ~ 396 (433)
+
T Consensus 369 ~ 369 (373)
T PRK07324 369 R 369 (373)
T ss_pred H
T ss_conf 9
No 101
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.65 E-value=4.9e-13 Score=111.28 Aligned_cols=336 Identities=19% Similarity=0.214 Sum_probs=199.6
Q ss_pred HHHHHHHHCHHHHHHHHHHHH-HH---HHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 764697858999999999999-99---83888104301--0298999983051028865798887533600679999999
Q gi|254780349|r 10 FQQSLIESDPDVFSLIGQESC-RQ---NDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENI 83 (433)
Q Consensus 10 ~~~~l~~~Dpei~~~i~~e~~-rq---~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~l 83 (433)
+.+.+....+.++..|.+... .+ ++-|+|--.|- .+++.+++++...+.+....||+-. .|. .++-+.
T Consensus 3 ~~~r~~~~~~~~~~~~~~~~~~~~~~G~~vi~l~iG~pdf~~P~~i~~a~~~a~~~~~~~gY~~~---~G~---~~lR~a 76 (388)
T PRK07366 3 FAQRLQPLQSNVFADMDRAKAQARAAGKEVIDLSLGSSDLPAPAHALEAIAQSLQDPSTHGYLLF---HGT---LPFREA 76 (388)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC---CCC---HHHHHH
T ss_conf 55565528948999999999999858998498708689999889999999999809767678987---578---999999
Q ss_pred HHHHHHHHCCCCC---EECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-C
Q ss_conf 9999998718863---0100001679-999999983154874881233448411147665433333220136658323-5
Q gi|254780349|r 84 AIERAKKLFNVNF---VNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-G 158 (433)
Q Consensus 84 a~~~a~~lF~a~~---anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~ 158 (433)
..+..++-+|.+. .+|-+.+|+. |...++.++++|||.|+..+...-.+. ..+...| -+.+.+++++++ .
T Consensus 77 Ia~~~~~~~g~~~~pe~~V~~t~G~~~al~~~~~al~~pGD~Vli~~P~Y~~y~---~~~~~~G--~~~~~vpl~~~~~~ 151 (388)
T PRK07366 77 AAAWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLALLNPGDFALLLDPGYPSHA---GGVYLAG--GQIYPMPLRAENDF 151 (388)
T ss_pred HHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHH---HHHHHCC--CEEEEEECCCCCCC
T ss_conf 999999997898898873998478899999999996699998998258776518---9999859--85799754666798
Q ss_pred CCCHHHHHHHHHHHCCCEEEEECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCC--CCC---CC
Q ss_conf 659899999998604667897055243-----53637999988641797899186201244320001232--200---23
Q gi|254780349|r 159 LLDMHEIESLAIEYNPKLIIVGGTAYS-----RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSP--VPH---CH 228 (433)
Q Consensus 159 ~ID~d~~~~~a~~~kPklIi~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~P--l~~---AD 228 (433)
.+|++++++.+. .++|+||+-....| -.-.++++.++|++.+.+++.|..|- .|+-.|..+.| +.. .+
T Consensus 152 ~~d~~~l~~~i~-~~tk~iil~~P~NPTG~v~s~~~l~~i~~~a~~~~i~lisDEiY~-~l~~~~~~~~p~~~~~~~~~~ 229 (388)
T PRK07366 152 LPVFADIPTEVL-AQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYV-DLVFDGEVEPPSILQADPEKS 229 (388)
T ss_pred CCCHHHHHHHHH-HCCCEEEECCCCCCCCEEEEHHHHHHHHHHHHHCCEEEECCCEEE-EEEECCCCCCCHHHHCCCCCC
T ss_conf 479999987404-228299985898984668038888889998740550786220214-458668766613542572206
Q ss_pred --EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHH--HCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q ss_conf --5674045652--2567448983362056501664--654322344556668999999997356489999999988899
Q gi|254780349|r 229 --IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSA--IFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQA 302 (433)
Q Consensus 229 --vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~a--vfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~ 302 (433)
|+..|.-|+| +|=|-|.+..+. ++.+++.+. .....| ...+..-|++..+.-....++..+..-++.+.
T Consensus 230 ~~i~~~S~SK~f~~~G~RiG~~i~~~-~li~~~~~~~~~~~~~~----~~~~~~~a~~al~~~~~~~~~~~~~~~~rr~~ 304 (388)
T PRK07366 230 VSIEFFTLSKSYNMGGFRIGFAIGNA-QLIAALRQIKAVVDFNQ----YRGILNGAIAALTGPQACVQQTVQIFRQRRDA 304 (388)
T ss_pred EEEEEECCCCCCCCCCCEEEEEECCH-HHHHHHHHHHHHCCCCC----HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 17997335325788765189996799-99999999987547654----39999999999968889999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCEEEECCCCC-CCCHHH-HHHHHHHCCEEEECCCCCCCCCCCCCCC---CCCCCC
Q ss_conf 99998616852334588898126316655-676799-9998885671880378998999988898---512246
Q gi|254780349|r 303 LAKKLQFLGFDIVSGGTDNHLMLVDLRSK-RMTGKR-AESILGRVSITCNKNSIPFDPESPFITS---GIRLGT 371 (433)
Q Consensus 303 La~~L~~~G~~vv~ggTd~H~vlvdl~~~-~~~G~~-a~~~Le~~gI~~Nkn~iP~D~~~~~~~s---GiRlGT 371 (433)
+.+.|.+.|+.+... --+-.+|+++... ..+..+ +.+.|+++||.+. ||. .|-++ =+||.-
T Consensus 305 ~~~~L~~~g~~~~~P-~g~~y~w~~l~~~~~~~~~ef~~~Ll~~~gV~v~----PG~---~Fg~~g~g~iRl~~ 370 (388)
T PRK07366 305 FINALHRIGWPVPLP-EATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAAS----PGS---GFGKSGEGYVRFAL 370 (388)
T ss_pred HHHHHHHCCCEEECC-CEEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEE----CCH---HHCCCCCCEEEEEE
T ss_conf 999999779875079-8577997878987889989999999983999997----664---65889998699996
No 102
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.64 E-value=9.2e-14 Score=116.33 Aligned_cols=306 Identities=17% Similarity=0.194 Sum_probs=188.0
Q ss_pred CCCCCCHHHHHHHHHHHC-HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 976520367764697858-9999999999999983888104301029899998305102886579888753360067999
Q gi|254780349|r 1 MTIICKNRFFQQSLIESD-PDVFSLIGQESCRQNDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDD 79 (433)
Q Consensus 1 m~~~~~~~~~~~~l~~~D-pei~~~i~~e~~rq~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~ 79 (433)
||.|.+++|-...++.-. |+ .....-.-+...|..|.-+.+.+.. ..+.++. .||-=.| .|+--.+.
T Consensus 1 m~~~~~~gf~T~~vH~G~~~~--------~~~gav~~PIy~sstf~~~~~~~~~-~~~~g~~-~g~~YsR--~~nPT~~~ 68 (398)
T PRK08249 1 MTGMNNAGVGTRAVWAGEQEY--------LPHGATQVPIVHSVAYGYDDIDEWY-DVALGKK-PGHIYSR--NTNPTVQA 68 (398)
T ss_pred CCCCCCCCCCCEEEECCCCCC--------CCCCCCCCCCCCCCCEEECCHHHHH-HHHCCCC-CCCEEEC--CCCHHHHH
T ss_conf 999889982500376898888--------8899833880078885608889999-8625886-8951408--98865999
Q ss_pred HHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCC
Q ss_conf 99999999998718863010000167999999998315487488123344841114766543-33332201366583235
Q gi|254780349|r 80 IENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNM-SGKWFKAIPYNVRKEDG 158 (433)
Q Consensus 80 iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~-~g~~~~~~~y~~d~~~~ 158 (433)
+| ++...|-|++.|-+ .-||..|-.++++++++|||+|+..+--.||-..- .-.+ ...+.++.. +|.
T Consensus 69 lE----~~la~LEg~~~a~~-~~SGmaAis~~l~~ll~~Gd~vv~~~~~YggT~~l--~~~~l~~~Gi~v~f--vd~--- 136 (398)
T PRK08249 69 LE----AKVKELEGAEAATS-FSTGMAAISNTLYTFLSPGDRVVSIKDTYGGTNKI--FEEFLPRMGVDVTL--CET--- 136 (398)
T ss_pred HH----HHHHHHHCCCEEEE-ECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH--HHHHHCCCCEEEEE--ECC---
T ss_conf 99----99999829970899-64789999999999718999899818984379999--99760159869998--799---
Q ss_pred CCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCC
Q ss_conf 659899999998604667897055243--53637999988641797899186201244320001232200-235674045
Q gi|254780349|r 159 LLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTH 235 (433)
Q Consensus 159 ~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTH 235 (433)
.|.+++++.++ .+.|+|++.....| ...|++++++||++.|+.+++|.. .|...+++|+++ ||||..|+.
T Consensus 137 -~d~~~~~~ai~-~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNT-----fatP~~~~Pl~~GaDivvhS~T 209 (398)
T PRK08249 137 -GDHEQIEREIA-KGCDLLYLETPTNPTLKITDIRRLSAAAHEVGALVVVDNT-----FATPINQNPLALGADLVVHSAT 209 (398)
T ss_pred -CCHHHHHHHCC-CCCEEEEEECCCCCCCEEECHHHHHHHHHHCCCEEEEECC-----CCHHHCCCCCCCCCCEEEECCC
T ss_conf -98699998558-8861899844899974666479999999874996998477-----4203127821157987997266
Q ss_pred CCCCCCC---CEEEEECCCCHHHHCCHHH-CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 6522567---4489833620565016646-54322344556668999999997356489999999988899999986168
Q gi|254780349|r 236 KSLRGPR---GGLIMTNHADLAKKINSAI-FPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLG 311 (433)
Q Consensus 236 Ktl~GPr---gGiI~~~~~e~~~~i~~av-fPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G 311 (433)
|.+.|-- ||++..+ +++.+++.... .-|..-+|+ .+-.+ ++- +. -...-.+|-.+||..+|+.|.++-
T Consensus 210 Kyi~GHsDvlgGvv~~~-~~~~~~l~~~~~~~G~~lsP~----~a~L~-~RG-L~-TL~lRm~r~~~nA~~vA~~L~~hp 281 (398)
T PRK08249 210 KFLGGHADALGGVVCGP-EALMAQVYHYREINGATLDPF----AAYLI-LRG-MK-TLALRVRQQQENAMALAEYLQTEP 281 (398)
T ss_pred CEECCCCCEEEEEECCC-HHHHHHHHHHHHHCCCCCCCH----HHHHH-HCC-CC-CHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 20036876351056088-999999999997048878917----78998-646-89-799999999889999999998399
Q ss_pred C--CCCCCCCC---CC------------EEEECCCCCCCCHHHHHHHHHHCCEE
Q ss_conf 5--23345888---98------------12631665567679999988856718
Q gi|254780349|r 312 F--DIVSGGTD---NH------------LMLVDLRSKRMTGKRAESILGRVSIT 348 (433)
Q Consensus 312 ~--~vv~ggTd---~H------------~vlvdl~~~~~~G~~a~~~Le~~gI~ 348 (433)
- +|..-|-. .| ++-++++. +-..+.+.+++..+.
T Consensus 282 ~V~~V~yPgL~s~p~h~la~~~~~g~gg~~sf~l~g---~~~~~~~f~~~l~l~ 332 (398)
T PRK08249 282 LVEAVNYPGLPTHPNHAIAKAQMRGFGGMLSFALKG---GMDTVRRLLPRLQYA 332 (398)
T ss_pred CCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEEC---CHHHHHHHHHHCCCC
T ss_conf 807798999999968899998679999711799818---999999999718805
No 103
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.64 E-value=3.7e-13 Score=112.12 Aligned_cols=324 Identities=19% Similarity=0.133 Sum_probs=206.5
Q ss_pred HHHCCCCCCCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCC-HHHHHHH
Q ss_conf 9838881043010--298999983051028865798887533600679999999999999871886301000-0167999
Q gi|254780349|r 32 QNDEIQLIASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQS-HSGSQMN 108 (433)
Q Consensus 32 q~~~l~LiASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp-~SG~~An 108 (433)
.++-|.|=+.||- +||.|.+++...+.. ...||.. .+.+-.+.+| +.+|.+.-++-. .+|+..-
T Consensus 34 ~~~ii~ls~nenp~gp~p~v~~a~~~~~~~--~~~YPd~------~~~~Lr~aiA-----~~~gv~~e~ii~~gnGs~e~ 100 (369)
T PRK00950 34 PESIIKLGSNENPLGPSPKAVEALIDEAPN--IHQYPEP------DAPELREAIS-----KYTGVPVENIIVGGDGADEI 100 (369)
T ss_pred CCCEEEECCCCCCCCCCHHHHHHHHHHHHC--CCCCCCC------CHHHHHHHHH-----HHHCCCCCCEEEECCCHHHH
T ss_conf 689888129899867889999999987532--5879998------8899999999-----98681975879975649999
Q ss_pred H-HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHCCCEEEEECCCCC-
Q ss_conf 9-99998315487488123344841114766543333322013665832-35659899999998604667897055243-
Q gi|254780349|r 109 Q-GVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKE-DGLLDMHEIESLAIEYNPKLIIVGGTAYS- 185 (433)
Q Consensus 109 ~-av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~-~~~ID~d~~~~~a~~~kPklIi~G~S~y~- 185 (433)
+ .++.++++|||+|+..+.....+.. .....|. +.+.++++++ +..+|.|++.+.+. .++|+|++.....|
T Consensus 101 i~~l~~~~~~~Gd~vl~~~P~y~~Y~~---~a~~~G~--~~~~v~~~~~~~f~~d~~~l~~~i~-~~tklv~l~nPnNPT 174 (369)
T PRK00950 101 IDVLMRILIDEGDEVIIPIPTFTYYEI---SARACGA--KPVYAKFDREEDFKLDVESVLNAIT-DKTKIIFLCTPNNPT 174 (369)
T ss_pred HHHHHHHHHCCCCEEEECCCCCHHHHH---HHHHCCC--EEEECCCCCCCCCCCCHHHHHHHCC-CCCEEEEEECCCCCC
T ss_conf 999999995799999989887303699---9998398--2022367712499889999997367-676089980899987
Q ss_pred -CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCC-CCCCCC-EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHH
Q ss_conf -5363799998864179789918620124432000123-220023-5674045652--2567448983362056501664
Q gi|254780349|r 186 -RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPS-PVPHCH-IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSA 260 (433)
Q Consensus 186 -~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~-Pl~~AD-vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~a 260 (433)
..++-+++++++++.+++++.|.++.- +. ..-+.+ ...+-+ +++.|.-|++ +|=|=|.+++++ ++.+++.+.
T Consensus 175 G~~~~~~el~~l~~~~~~~vv~DEaY~e-f~-~~~~~~l~~~~~n~iv~~SfSK~~~laGlRlGy~i~~~-~li~~l~~~ 251 (369)
T PRK00950 175 GNLIPEEDIRKIVESTDALVFVDEAYIE-FA-EYDLTELALEYDNVLVLRTFSKVFGLAGMRIGYGIMPK-WIIEYMMRI 251 (369)
T ss_pred CEEECHHHHHHHHHCCCEEEEECCCHHH-HC-CCCHHHHHHHCCCEEEEEECCHHHHCCCCEEEEEECCH-HHHHHHHHH
T ss_conf 8324799987898718879994242675-25-79715678745865898412155405775046764699-999999985
Q ss_pred HCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCEEEECCCCCCCCHHHHH
Q ss_conf 654322344556668999999997356489999999988899999986168-5233458889812631665567679999
Q gi|254780349|r 261 IFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLG-FDIVSGGTDNHLMLVDLRSKRMTGKRAE 339 (433)
Q Consensus 261 vfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G-~~vv~ggTd~H~vlvdl~~~~~~G~~a~ 339 (433)
.-|..++. +.+.|+.+ +|. -....+...+.+.++-+.|.+.|.+.| +.+.. ++...+|+++.+ +.+..+..
T Consensus 252 ~~~~~v~~--~aq~aa~a-aL~--~~~~~~~~~~~~~~~R~~l~~~L~~l~~~~v~p--s~anFil~~~~~-~~~~~~~~ 323 (369)
T PRK00950 252 KPPFSLTR--LSQAAAIA-ALR--DKEFIEKSIELGIESREYLYEGLKKFKPLKVYP--SEANYVLVDVKP-GMTAKEFT 323 (369)
T ss_pred CCCCCHHH--HHHHHHHH-HHC--CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC--CCCEEEEEECCC-CCCHHHHH
T ss_conf 68757069--99999999-950--958899999999999999999998579977878--986189998999-99999999
Q ss_pred HHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 988856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 340 SILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 340 ~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
+.|.+.||.+- |+..-......-+||... .++|++.+-+-+.++|+
T Consensus 324 ~~Ll~~gI~Vr----~g~~f~~~~~~~iRisig-------t~~en~~ll~al~~il~ 369 (369)
T PRK00950 324 EELLKKGVIVR----DCTSFEGLGDYYIRVSIG-------TLEENERFLEILKEIVE 369 (369)
T ss_pred HHHHHCCEEEE----ECCCCCCCCCCEEEEEEC-------CHHHHHHHHHHHHHHHC
T ss_conf 99996995999----687777789898999808-------99999999999999859
No 104
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.64 E-value=1e-14 Score=122.95 Aligned_cols=283 Identities=14% Similarity=0.129 Sum_probs=174.4
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHH
Q ss_conf 81043010298999983051028865798887533600679999999999999871886301000016799999999831
Q gi|254780349|r 37 QLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALM 116 (433)
Q Consensus 37 ~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl 116 (433)
+...|..|..+.+.+.. ..+.++ ..||-=.|+ |+--.+.+| ++...|-|++.+-+- -||..|-.+++++++
T Consensus 31 PI~~sstf~~~~~~~~~-~~~~~~-~~g~~YsR~--~nPT~~~lE----~~la~LEg~~~a~~~-sSGmaAi~~~l~~~l 101 (403)
T PRK07503 31 PVYLTATFAFPTAEYGA-ACFAGE-EAGHFYSRI--SNPTLALLE----QRMASLEGGEAGLAL-ASGMGAITATLWTLL 101 (403)
T ss_pred CEECCCCEEECCHHHHH-HHHCCC-CCCCEECCC--CCHHHHHHH----HHHHHHHCCCEEEEE-CCHHHHHHHHHHHHC
T ss_conf 81078886618889998-762687-679513089--885699999----999998499648886-278999999999965
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHH
Q ss_conf 548748812334484111476654333332201366583235659899999998604667897055243--536379999
Q gi|254780349|r 117 HPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFR 194 (433)
Q Consensus 117 ~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~ 194 (433)
+|||+|+..+--.||-...-.. .+...+.++..+ |. -|.+.+++.++ .+.|+|++.....| ...|++++.
T Consensus 102 ~~Gdhiv~~~~~YGgt~~l~~~-~l~~~Gi~~~~v--d~----~d~~~~~~ai~-~~Tkli~~Etp~NP~l~v~Di~~ia 173 (403)
T PRK07503 102 RPGDEVIVGRTLYGCTFAFLHH-GLGEFGVKVRHV--DL----TDAKALKAAIS-EKTRMIYFETPANPNMQLVDIAAVV 173 (403)
T ss_pred CCCCEEEECCCCCCCHHHHHHH-HHHHCCEEEEEE--CC----CCHHHHHHHCC-CCCEEEEEECCCCCCCEEECHHHHH
T ss_conf 9999899768875328999984-463177599986--89----89899997518-6732999952799986630579999
Q ss_pred HHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHHCHHHHHHHH
Q ss_conf 88641797899186201244320001232200-2356740456522567---4489833620565016646543223445
Q gi|254780349|r 195 SIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAIFPGLQGGPF 270 (433)
Q Consensus 195 eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~avfPg~qg~~~ 270 (433)
+||++.|+++++|.. .|..++++||++ ||+|..|+.|.+.|-- ||.+.++++ +..++.....-.+.|+.
T Consensus 174 ~iA~~~g~~~vVDNT-----fatP~~~~Pl~~GaDivvhS~TKYi~GHsD~l~G~v~~~~~-~~~~~r~~~~~~~~G~~- 246 (403)
T PRK07503 174 EAARGHDALVVVDNT-----YCTPYLQRPLELGADLVVHSATKYLSGHGDITAGLVVGGKA-LVDRIRLEGLKDMTGAV- 246 (403)
T ss_pred HHHHHCCCEEEEECC-----CCCCCCCCHHHCCCCEEEEECCEEECCCCCEEEEEEECCHH-HHHHHHHHHHHHCCCCC-
T ss_conf 999865885998367-----54514016133189889995450313787605579972617-88999999998742886-
Q ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC-CC-CCCCCCC---------------CCEEEECCCCCCC
Q ss_conf 56668999999997356489999999988899999986168-52-3345888---------------9812631665567
Q gi|254780349|r 271 MHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLG-FD-IVSGGTD---------------NHLMLVDLRSKRM 333 (433)
Q Consensus 271 ~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G-~~-vv~ggTd---------------~H~vlvdl~~~~~ 333 (433)
+.-..+-.+ ++- ++ -...-.+|-.+||.++|+.|.++- +. |...|=. .-++-++++.
T Consensus 247 lsP~da~L~-lRG-L~-TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~shp~h~la~~q~~g~gg~~sf~l~g--- 320 (403)
T PRK07503 247 LSPHDASLL-MRG-LK-TLALRMDRHCANAQQVAEFLARQPAVELVHYPGLPSFAQHALAQRQMRLPGGMIAFELKG--- 320 (403)
T ss_pred CCHHHHHHH-HCC-CC-CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECC---
T ss_conf 886888998-646-77-599999999999999999997489955898988889801899998678998368999669---
Q ss_pred CHHHHHHHHHHCCEEE
Q ss_conf 6799999888567188
Q gi|254780349|r 334 TGKRAESILGRVSITC 349 (433)
Q Consensus 334 ~G~~a~~~Le~~gI~~ 349 (433)
+-..+.+.++...+..
T Consensus 321 ~~~~~~~f~~~L~lf~ 336 (403)
T PRK07503 321 GIEAGRRFMNALQLFA 336 (403)
T ss_pred CHHHHHHHHHHCCCCE
T ss_conf 8999999998089465
No 105
>PRK08175 aminotransferase; Validated
Probab=99.64 E-value=2.6e-12 Score=106.23 Aligned_cols=352 Identities=18% Similarity=0.199 Sum_probs=205.0
Q ss_pred HHHHCHHHHHHHHHH---HHHH-HHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 978589999999999---9999-83888104301--02989999830510288657988875336006799999999999
Q gi|254780349|r 14 LIESDPDVFSLIGQE---SCRQ-NDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIER 87 (433)
Q Consensus 14 l~~~Dpei~~~i~~e---~~rq-~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~ 87 (433)
+++..|-.+..+.+. .++| ++-|+|--.|- .+++.+.+++...+..--..||+ -.+-+.++-+-..+.
T Consensus 6 ~~~l~~~~~~~~~~~~~~~~~~G~dvi~l~iG~pdf~~p~~i~~a~~~~~~~~~~~~Y~------~~~G~~~LReaia~~ 79 (395)
T PRK08175 6 IDRLPPYVFNITAELKMAARRRGEDIIDFSMGNPDGATPPHIVEKLCEVAQRPDTHGYS------TSRGIPRLRRAISRW 79 (395)
T ss_pred HHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC------CCCCHHHHHHHHHHH
T ss_conf 53099978999999999998579981877697899987999999999997699988889------975749999999999
Q ss_pred HHHHCCCCC--E-ECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 998718863--0-100001679-999999983154874881233448411147665433333220136658323565989
Q gi|254780349|r 88 AKKLFNVNF--V-NVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMH 163 (433)
Q Consensus 88 a~~lF~a~~--a-nvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d 163 (433)
.++-+|.+. - +|-..+|++ |...++.+|++|||.|+..+...-.+. ......| .+.+.+++++++.. .+
T Consensus 80 ~~~~~g~~~~p~~~iivt~Ga~~al~~~~~al~~pGD~Vli~~P~Yp~y~---~~~~~~g--~~~~~vpl~~~~~~--~~ 152 (395)
T PRK08175 80 YQDRYDVDIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHI---YGAVIAG--AQVRSVPLVEGVDF--FN 152 (395)
T ss_pred HHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHH---HHHHHHC--CCEEEEECCCCCCC--HH
T ss_conf 99986898787883998888799999999972799898997787740149---9999847--84078504577760--44
Q ss_pred HHHHHHHHH--CCCEEEEECCCCC--C---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHH-CCCCCCCC---CC--EE
Q ss_conf 999999860--4667897055243--5---36379999886417978991862012443200-01232200---23--56
Q gi|254780349|r 164 EIESLAIEY--NPKLIIVGGTAYS--R---VWDWERFRSIADSIGAYLMADISHISGLVVGG-QHPSPVPH---CH--IV 230 (433)
Q Consensus 164 ~~~~~a~~~--kPklIi~G~S~y~--~---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g-~~~~Pl~~---AD--vv 230 (433)
.+++..++. |+|+|++-....| . .-.++++.++|.++|.+++.|..+- .|+-.| .+++.+.. .| |.
T Consensus 153 ~le~~~~~~~~ktk~iiln~P~NPTG~v~s~e~l~~i~~~a~~~~i~visDEiY~-~l~~d~~~~~s~~~~~~~~~~~i~ 231 (395)
T PRK08175 153 ELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYA-DIVYDGWKAPSIMQVPGAKDVAVE 231 (395)
T ss_pred HHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHH-HHCCCCCCCCCHHHCCCCCCCEEE
T ss_conf 1999997268774599988999988875799999999998886694898235314-210288778685447456465489
Q ss_pred EECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 74045652--2567448983362056501664654322344556668999999997356489999999988899999986
Q gi|254780349|r 231 TTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQ 308 (433)
Q Consensus 231 t~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~ 308 (433)
.+|.-|+| +|=|-|.+..++ ++.+++.+.---...+.+...+.|+.+ ++ +.-+....+..+..-++...|.+.|.
T Consensus 232 ~~S~SK~f~~~G~RiG~ii~~~-~~i~~~~~~~~~~~~~~~~~~Q~aa~~-al-~~~~~~~~~~~~~~~~rr~~l~~~L~ 308 (395)
T PRK08175 232 FFTLSKSYNMAGWRIGFMVGNP-ELVSALARIKSYHDYGTFTPLQVAAIA-AL-EGDQQCVRDIAEQYKRRRDVLVKGLH 308 (395)
T ss_pred EEECCCCCCCCCCCEEEEECCH-HHHHHHHHHHHHCCCCCCHHHHHHHHH-HH-HCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9503223477754569996499-999999999987046876799999999-98-59899999999999999999999998
Q ss_pred HCCCCCCC-CCCCCCEEEECCCC--CCCCHHH-HHHHHHHCCEEEECCCCCCCCCCCCCCCC---CCCCCHHHHHCCCCH
Q ss_conf 16852334-58889812631665--5676799-99988856718803789989999888985---122466673079998
Q gi|254780349|r 309 FLGFDIVS-GGTDNHLMLVDLRS--KRMTGKR-AESILGRVSITCNKNSIPFDPESPFITSG---IRLGTPSGTTRGFKE 381 (433)
Q Consensus 309 ~~G~~vv~-ggTd~H~vlvdl~~--~~~~G~~-a~~~Le~~gI~~Nkn~iP~D~~~~~~~sG---iRlGT~aiTtrG~~e 381 (433)
+.|+.+.. .|| =.+|+++.. .+++..+ +.+.|+++||.+. ||. .|-+.| +||.-. ..+
T Consensus 309 ~~g~~~~~P~G~--~y~w~~~~~~~~~~~~~ef~~~ll~e~~V~v~----PG~---~Fg~~g~~~vRl~~~------~~~ 373 (395)
T PRK08175 309 EAGWMVEMPKAS--MYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVS----PGI---GFGDYGDTHVRFALI------ENR 373 (395)
T ss_pred HCCCEEECCCEE--EEEEEECCCCCCCCCHHHHHHHHHHHCCEEEE----CCH---HHCCCCCCEEEEEEC------CCH
T ss_conf 759854068966--69968888876789989999999984989997----773---327799986999972------899
Q ss_pred HHHHHHHHHHHHHHHC
Q ss_conf 9999999999999602
Q gi|254780349|r 382 KDFEYIGELIAQILDG 397 (433)
Q Consensus 382 ~em~~iA~li~~~L~~ 397 (433)
+.+++-.+-|.++++.
T Consensus 374 ~~l~eal~Ri~~~~~a 389 (395)
T PRK08175 374 DRIRQAVRGIKAMFRA 389 (395)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999986
No 106
>PRK07337 aminotransferase; Validated
Probab=99.64 E-value=3e-13 Score=112.77 Aligned_cols=339 Identities=14% Similarity=0.109 Sum_probs=196.9
Q ss_pred HHHHHHCHHH-HHHHHHHHHH---HHHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 4697858999-9999999999---983888104301--029899998305102886579888753360067999999999
Q gi|254780349|r 12 QSLIESDPDV-FSLIGQESCR---QNDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAI 85 (433)
Q Consensus 12 ~~l~~~Dpei-~~~i~~e~~r---q~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~ 85 (433)
+.+....|.. .++.+.=.+. .++-|+|--.+. -+++.+++++...+..- .-| |.-..-..++-+-..
T Consensus 5 ~r~~~~~~s~~~~i~~~a~~~~~~G~dvi~l~~g~pdf~~p~~i~~a~~~~~~~~-~~~------Y~~~~G~~~lreaia 77 (388)
T PRK07337 5 SRVDAIEPFYVMELAKEAQALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRG-VTQ------YTSALGLAPLREAIA 77 (388)
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCC-CCC------CCCCCCCHHHHHHHH
T ss_conf 4857099429999999999999779980899799899987999999999998469-998------899988799999999
Q ss_pred HHHHHHCCCCC--EECCCHHH-HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCC
Q ss_conf 99998718863--01000016-79999999983154874881233448411147665433333220136658323-5659
Q gi|254780349|r 86 ERAKKLFNVNF--VNVQSHSG-SQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-GLLD 161 (433)
Q Consensus 86 ~~a~~lF~a~~--anvqp~SG-~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~~ID 161 (433)
+..++-||.+. -||-..+| +.|...++.+|++|||.|+..+...-.+.. .+ ....-+.+.++.++++ ..+|
T Consensus 78 ~~~~~~~g~~i~pe~I~it~G~~~al~~~~~~l~~pGD~Vlv~~P~Yp~~~~---~~--~~~g~~~~~vp~~~~~~~~~d 152 (388)
T PRK07337 78 AHYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRH---FV--AAAEGRPVLVPSGPAERFQLT 152 (388)
T ss_pred HHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH---HH--HHCCCEEEEEECCCCCCCCCC
T ss_conf 9999986899966887984875999999999966999989985887365999---99--973988999403710067789
Q ss_pred HHHHHHHHHHHCCCEEEEECCCCC--C---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CC-EEEECC
Q ss_conf 899999998604667897055243--5---3637999988641797899186201244320001232200-23-567404
Q gi|254780349|r 162 MHEIESLAIEYNPKLIIVGGTAYS--R---VWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CH-IVTTTT 234 (433)
Q Consensus 162 ~d~~~~~a~~~kPklIi~G~S~y~--~---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-AD-vvt~sT 234 (433)
.+++++... .+.|+|++-....| + .-.++++.++|.+.+.+++.|..| ..|+-.+...+++.. -+ |+.+|.
T Consensus 153 ~~~l~~~~~-~~tk~iil~nP~NPtG~v~s~~el~~i~~~a~~~~~~vIsDEiY-~~l~~~~~~~~~~~~~~~~i~~~S~ 230 (388)
T PRK07337 153 ADDVRTHWG-ERTRGVLLASPSNPTGTSIEPDELRRIVEAVRARGGFTIVDEIY-QGLSYDAAPVSALSLGDDVITINSF 230 (388)
T ss_pred HHHHHHHCC-CCCEEEEECCCCCCCCEEEEHHHHHHHHHHHHCCCEEEECCCCC-CCCCCCCCCCCCCCCCCCEEEECCC
T ss_conf 799998578-65539997899798885626777433554431458088457641-0012489986710057857998266
Q ss_pred CCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 5652--25674489833620565016646543223445566689999999973564899999999888999999861685
Q gi|254780349|r 235 HKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGF 312 (433)
Q Consensus 235 HKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~ 312 (433)
-|+| +|=|-|.+...+ ++.+++.+..--...+.+.+.+.|+.+.--.+.. ..+....+...++...+.+.|.+.|+
T Consensus 231 SK~~~~~G~RiG~~i~p~-~li~~~~~~~~~~~~~~~~~~q~aa~~~~~~~~~-~~~~~~~~~~~~~r~~~~~~l~~~~~ 308 (388)
T PRK07337 231 SKYFNMTGWRLGWLVVPP-ALVGTFEKLAQNLFICASALAQHAALACFEPDTL-AIYERRRAEFKRRRDFIVPALESLGF 308 (388)
T ss_pred CCCCCCCCCCEEEEEECH-HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHH-HHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 545578661569999889-9999999999854588669999999998482247-99999999999999999999997599
Q ss_pred CCC--CCCCCCCEEEECCCCC----CCCHHHH-HHHHHHCCEEEECCCCCCCCCCCCCC-CCCCCCCH
Q ss_conf 233--4588898126316655----6767999-99888567188037899899998889-85122466
Q gi|254780349|r 313 DIV--SGGTDNHLMLVDLRSK----RMTGKRA-ESILGRVSITCNKNSIPFDPESPFIT-SGIRLGTP 372 (433)
Q Consensus 313 ~vv--~ggTd~H~vlvdl~~~----~~~G~~a-~~~Le~~gI~~Nkn~iP~D~~~~~~~-sGiRlGT~ 372 (433)
.+. ..|| -.+|+|++.. ..+..+. ...|+++||.++ ||..=.+..+ .-+||.-.
T Consensus 309 ~~~~~P~G~--~~~w~d~~~~~~~~~~d~~~~~~~ll~e~gV~v~----PG~~Fg~~~~~~~iRl~~a 370 (388)
T PRK07337 309 KVPVMPDGA--FYVYADCGGVAHPAAGDSAALTFAMLHDAGVVLV----PGMDFGPHAPRDYIRLSYA 370 (388)
T ss_pred CCCCCCCEE--EEEEEECHHHCCCCCCCHHHHHHHHHHHCCEEEE----CCHHHCCCCCCCEEEEEEC
T ss_conf 646578826--6994786421699999999999999985999997----7622189999997999971
No 107
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.64 E-value=3e-13 Score=112.71 Aligned_cols=313 Identities=16% Similarity=0.226 Sum_probs=211.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC--C-------
Q ss_conf 8875336006799999999999998718863010000167999999998315487488123344841114--7-------
Q gi|254780349|r 66 PSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTH--G------- 136 (433)
Q Consensus 66 pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlsh--g------- 136 (433)
-|..-|+|.+-...+| +-.+++||-+|+ +-.|.|-.|-...+..+++|||.|.+. -|... +
T Consensus 69 ~gDEsYAGs~sf~~l~----~~v~difg~~~v-iPtHQGRaAE~IL~~~l~k~G~~vp~N-----~hFdTTrahie~~G~ 138 (459)
T PRK13237 69 IGDEAYAGSRNFYHLE----ATVQEYYGFKHV-VPTHQGRGAENLLSRIAIKPGQYVPGN-----MYFTTTRYHQELNGG 138 (459)
T ss_pred HCCHHHHCCCCHHHHH----HHHHHHCCCCEE-EECCCCHHHHHHHHHHHCCCCCEECCC-----CCCCCHHHHHHHCCC
T ss_conf 3045553240189999----999997299524-066776668999999971589895788-----686640899996598
Q ss_pred CCCCCC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC---CEEEEE---CCCCCCCC---CHHHHHHHHHHCCCEEEE
Q ss_conf 665433-33322013665832356598999999986046---678970---55243536---379999886417978991
Q gi|254780349|r 137 SSVNMS-GKWFKAIPYNVRKEDGLLDMHEIESLAIEYNP---KLIIVG---GTAYSRVW---DWERFRSIADSIGAYLMA 206 (433)
Q Consensus 137 ~~~~~~-g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kP---klIi~G---~S~y~~~~---d~~~l~eIa~~~ga~l~~ 206 (433)
.++.+- -..++... ..+-.|++|+++++++++++-+ .+|++- -|.-..|. +++++++||+++|..++.
T Consensus 139 ~~~dl~~~ea~d~~~--~~pFKGN~Dl~kLe~~i~~~g~~~I~~v~~tiTnN~~GGQPVSm~Nir~v~~la~~~gipl~l 216 (459)
T PRK13237 139 IFVDIIIDEAHDAQS--LHPFKGNVDLDKLQKLIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFF 216 (459)
T ss_pred EEEEEECCCCCCCCC--CCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 787413520258677--889688779999999998748556008999985268788064689999999999980996998
Q ss_pred CCCCHHH---HHHHH---C--------CCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCHHHHCCHHH-----CHHHHH
Q ss_conf 8620124---43200---0--------123220023567404565225674489833620565016646-----543223
Q gi|254780349|r 207 DISHISG---LVVGG---Q--------HPSPVPHCHIVTTTTHKSLRGPRGGLIMTNHADLAKKINSAI-----FPGLQG 267 (433)
Q Consensus 207 D~aH~~G---LIa~g---~--------~~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~av-----fPg~qg 267 (433)
|+|-++- +|--. . ..-=+.|||.+|.|.-|---...||+|.+||++++++...-+ ||.+ |
T Consensus 217 DaaRfaENAyFIk~RE~gy~~~si~eI~rEmfs~aDg~tmSaKKD~~vniGG~ia~~d~~l~~~~~~~~i~~EGf~TY-G 295 (459)
T PRK13237 217 DATRCVENAYFIKEREEGYQDKSIKEILKEMFSYADGATMSGKKDCLVNIGGFLAMNDDELFQEAKELVVVYEGMPSY-G 295 (459)
T ss_pred EHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHEEECCCCCCC-C
T ss_conf 766788768999834420148999999999974402799983202534655679857799999998551120587554-5
Q ss_pred HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC-------CCCCHHHH-H
Q ss_conf 445566689999999973564899999999888999999861685233458889812631665-------56767999-9
Q gi|254780349|r 268 GPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRS-------KRMTGKRA-E 339 (433)
Q Consensus 268 ~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~-------~~~~G~~a-~ 339 (433)
|.--.-+.|+|+.|.|...+++-. .-+.-.+.|++.|.+.|++|+. .+-.|-|.||.+. ...-|... .
T Consensus 296 GlagRDmeAlA~GL~E~~de~yl~---~Ri~qv~yl~~~L~~~GVPvv~-P~GGHav~iDA~~fLPhip~~~fPa~aLa~ 371 (459)
T PRK13237 296 GMAGRDMEAMAIGIEESVQDDYIR---HRIGQVRYLGEKLLAAGVPIVE-PVGGHAVFLDARRFLPHIPQDQFPAQALAA 371 (459)
T ss_pred CCCHHHHHHHHCCHHHHCCHHHHH---HHHHHHHHHHHHHHHCCCCEEC-CCCCEEEEEEHHHHCCCCCHHHCCHHHHHH
T ss_conf 622646999963437543679999---8899999999999987997036-898528997467756899803392999999
Q ss_pred HHHHHCCEEEE-CCCCCC--CCCCC-CCC---CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 98885671880-378998--99998-889---8512246667307999899999999999996025
Q gi|254780349|r 340 SILGRVSITCN-KNSIPF--DPESP-FIT---SGIRLGTPSGTTRGFKEKDFEYIGELIAQILDGS 398 (433)
Q Consensus 340 ~~Le~~gI~~N-kn~iP~--D~~~~-~~~---sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~~ 398 (433)
..-...||..- .-++-. ||+.. ..+ -=+|| ++-||=+.-.+|+-||+-+..+.+..
T Consensus 372 ~LY~~~GIR~~E~Gs~~~grdp~tg~~~~~~~ElvRL---AiPRRvYT~sH~dyva~~l~~l~~~r 434 (459)
T PRK13237 372 ELYIDSGVRSMERGIVSAGRDPKTGENHYPKLELVRL---TIPRRVYTYAHMDVVAESVIKLYKHR 434 (459)
T ss_pred HHHHHCCCCEEEECCHHCCCCCCCCCCCCCCCCEEEE---ECCCHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 9999719346854010116688875656876333677---23502035889999999999999648
No 108
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.64 E-value=2.8e-14 Score=119.96 Aligned_cols=335 Identities=16% Similarity=0.144 Sum_probs=193.8
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHH
Q ss_conf 88104301029899998305102886579888753360067999999999999987188630100001679999999983
Q gi|254780349|r 36 IQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLAL 115 (433)
Q Consensus 36 l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~AL 115 (433)
-++..|..|.-+...++. ..|.++. +||-=.| -|+--++.+| ++...|-|++.|-+ .-||+.|-.+++++|
T Consensus 38 ~PIy~sstf~f~~~~~~~-~~f~g~~-~g~~YsR--~~NPT~~~lE----~~la~LEgg~~a~~-~sSGMaAi~~~ll~l 108 (406)
T PRK07810 38 EALYLTSGYVYESAAAAE-KAFTGEL-DRYVYSR--YGNPTVSMFE----ERLRLIEGAPACFA-TASGMAAVFTALGAL 108 (406)
T ss_pred CCEECCCCEECCCHHHHH-HHHCCCC-CCCCCCC--CCCHHHHHHH----HHHHHHCCCCEEEE-ECCHHHHHHHHHHHH
T ss_conf 770067771149999999-9837986-7961308--9886289999----99999709985998-438999999999997
Q ss_pred HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHH
Q ss_conf 1548748812334484111476654333332201366583235659899999998604667897055243--53637999
Q gi|254780349|r 116 MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERF 193 (433)
Q Consensus 116 l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l 193 (433)
+++||+|++.+--.||-..--.. .+.-.+.++.. +|. -|.+++++.++ .+.|+|++..-..| ...|++++
T Consensus 109 l~~Gd~iv~~~~~YGgT~~l~~~-~l~~~GI~~~~--vd~----~d~~~~~~ai~-~~Tk~v~~EtpsNP~l~v~Di~ai 180 (406)
T PRK07810 109 LGAGDRLVAARSLFGSCFVVCNE-ILPRWGVETVF--VDG----DDLSQWEEALS-VPTQAVFFETPSNPMQSLVDIAAV 180 (406)
T ss_pred HCCCCEEEEECCCCCCHHHHHHH-HHHCCCEEEEE--ECC----CCHHHHHHHCC-CCCEEEEEECCCCCCCEECCHHHH
T ss_conf 28999899837986377999997-76448749999--689----88599997558-886289984489998561167999
Q ss_pred HHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHH-CHHHHHH
Q ss_conf 988641797899186201244320001232200-2356740456522567---4489833620565016646-5432234
Q gi|254780349|r 194 RSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAI-FPGLQGG 268 (433)
Q Consensus 194 ~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~av-fPg~qg~ 268 (433)
++||++.|+.+++|.. .|..++++|+++ ||||..|+.|.+.|.- ||.|.++++.+.+++.... .-|..-+
T Consensus 181 a~iA~~~g~~~vVDNT-----faTP~~~rPl~~GADiVvhS~TKyi~GHsd~lgG~v~~~~~~~~~~~~~~~~~~G~~ls 255 (406)
T PRK07810 181 TELAHAAGAKVVLDNV-----FATPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALS 255 (406)
T ss_pred HHHHHHCCCEEEEECC-----CCCCCCCCCHHCCCCEEEEECCCCCCCCCCEECCEEECCHHHHHHHHHHHHHHCCCCCC
T ss_conf 9999974985999788-----77755358421289889995353236887603636952678889999999997389898
Q ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC-C-CCCCCCC---------------CCEEEECCCCC
Q ss_conf 45566689999999973564899999999888999999861685-2-3345888---------------98126316655
Q gi|254780349|r 269 PFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGF-D-IVSGGTD---------------NHLMLVDLRSK 331 (433)
Q Consensus 269 ~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~-~-vv~ggTd---------------~H~vlvdl~~~ 331 (433)
|+ .+-.+ ++- ++ -...-++|-.+||.++|+.|.+... . |..-|=. ..++-++++..
T Consensus 256 P~----~a~l~-lrG-L~-TL~lRm~r~~~nA~~vA~~L~~hp~V~~V~yPgL~shp~h~la~r~~~g~G~~~sf~l~~~ 328 (406)
T PRK07810 256 AF----NAWTL-LKG-LE-TLAIRVQHSNASALRIAEFLEGHPAVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFELDAP 328 (406)
T ss_pred HH----HHHHH-HCC-CC-CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEECC
T ss_conf 78----88998-706-89-7999999999999999999973998137980578778177899844789986328998036
Q ss_pred CCCHHHH-HHHHHHCC---EEEECCCCCCCCCCCCCCCCCCCCCHHHHH-CCCCHHHHHHHHHHHHHHHHCCCCCCCHHH
Q ss_conf 6767999-99888567---188037899899998889851224666730-799989999999999999602577621179
Q gi|254780349|r 332 RMTGKRA-ESILGRVS---ITCNKNSIPFDPESPFITSGIRLGTPSGTT-RGFKEKDFEYIGELIAQILDGSSSDEENHS 406 (433)
Q Consensus 332 ~~~G~~a-~~~Le~~g---I~~Nkn~iP~D~~~~~~~sGiRlGT~aiTt-rG~~e~em~~iA~li~~~L~~~~~~~~~~~ 406 (433)
.-.+++. -+.+++.. +.+|- |+.++- +--|+.|+ |.+.+++.+.. .+=...++...-.|+.+.
T Consensus 329 ~~~~~~~~~~~~~~l~l~~~a~sl----Gg~~SL-------i~~Pas~th~~~~~e~r~~~-Gi~~~liRlSVGlEd~~D 396 (406)
T PRK07810 329 EDAAKQRAFEVLDKLRLIDISNNL----GDAKSL-------ITHPATTTHRAMGPEGRAAI-GLGDGVVRISVGLEDTDD 396 (406)
T ss_pred CHHHHHHHHHHHHHCCCCEEEECC----CCCCEE-------EECCCCCCCCCCCHHHHHHC-CCCCCEEEEEECCCCHHH
T ss_conf 178899999999828724353356----766604-------66775356510799899866-979495999932199999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780349|r 407 LELTV 411 (433)
Q Consensus 407 ~~~~i 411 (433)
+++.+
T Consensus 397 Li~DL 401 (406)
T PRK07810 397 LIADL 401 (406)
T ss_pred HHHHH
T ss_conf 99999
No 109
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.64 E-value=9.3e-13 Score=109.33 Aligned_cols=332 Identities=18% Similarity=0.159 Sum_probs=202.0
Q ss_pred CCCCCHHHHHHHHCCCCCCCCCCCCCC----------------CCCCCCHHHHHH----------------HHHHHHHHH
Q ss_conf 010298999983051028865798887----------------533600679999----------------999999999
Q gi|254780349|r 42 ENIVSRAVLEAQGSILTNKYAEGYPSK----------------RYYGGCQYVDDI----------------ENIAIERAK 89 (433)
Q Consensus 42 EN~~S~~v~~~l~S~l~nkyaeG~pg~----------------ryy~G~~~~d~i----------------E~la~~~a~ 89 (433)
++.++|.-..+.-=.-...|+=-.||. +|||-+-+-..+ -.-|+++|.
T Consensus 105 ~~llPpff~al~~y~~~~~~s~~~PGH~gG~~f~k~p~G~~f~~f~Gen~fraD~~~~~~~lg~ll~h~G~~~eAq~~AA 184 (720)
T PRK13578 105 ENLLPPFFRTLTQYVEMGNSTFDCPGHQGGQFFRKHPAGRQFYDFFGENLFRSDMCNADVKLGDLLIHEGAAKDAQKHAA 184 (720)
T ss_pred HHCCCHHHHHHHHHHHCCCCEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 83698689999999854685012898877542215822889999850677776630000244330037884479999999
Q ss_pred HHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC-CCCCCCCCC-----CCCCCCC----CCCCCC
Q ss_conf 871886301000016799999999831548748812334484111476-654333332-----2013665----832356
Q gi|254780349|r 90 KLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGS-SVNMSGKWF-----KAIPYNV----RKEDGL 159 (433)
Q Consensus 90 ~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~-~~~~~g~~~-----~~~~y~~----d~~~~~ 159 (433)
++|||++.-.=...-|.+|.+|.+|++.|||+|+.. .--|-|.-+ ....+|..- ...+|++ ++ ..
T Consensus 185 ~~FGAD~TyFvvNGTS~~nk~v~~a~~~pGD~VLvd---RN~HKSv~~GALIlsGA~PVYl~p~rN~~GiiggI~~--~~ 259 (720)
T PRK13578 185 KVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFD---RNNHKSNHHGALIQAGATPVYLETARNPFGFIGGIDA--HC 259 (720)
T ss_pred HHHCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEC---CCCHHHHHHHHHHHCCCEEEEECCCCCCCCEECCCCH--HH
T ss_conf 984998269995771088999999745899999965---6435777778898669767996664675651167485--75
Q ss_pred CCHHHHHHHHHH--------HCC-CEEEEE-CCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCC--CC--CC
Q ss_conf 598999999986--------046-678970-55243536379999886417978991862012443200012--32--20
Q gi|254780349|r 160 LDMHEIESLAIE--------YNP-KLIIVG-GTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHP--SP--VP 225 (433)
Q Consensus 160 ID~d~~~~~a~~--------~kP-klIi~G-~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~--~P--l~ 225 (433)
+|-+.+++.+++ .+| ++.++- .+.+...+|.+++.+.....+-++++|.||..=.---..++ +| ++
T Consensus 260 f~~~~i~~~I~~~~~~~a~~~~p~~~aVit~~TYdGi~yn~~~I~~~i~~~~~~ilfDEAw~~~~~F~P~~~d~~p~~l~ 339 (720)
T PRK13578 260 FDEEYLREQIREVAPERADEARPFRLAIIQLGTYDGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCSPLLLE 339 (720)
T ss_pred CCHHHHHHHHHHHCHHHHCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHHCCEEEEECCHHHHHHCCCCCCCCCCCCCC
T ss_conf 27577898887436333123488618999468753542349999999864078389851102144328531124643334
Q ss_pred C-CC----EEEECCCCCCCC-CCCEEEEECCCCH--------HHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
Q ss_conf 0-23----567404565225-6744898336205--------65016646543223445566689999999973564899
Q gi|254780349|r 226 H-CH----IVTTTTHKSLRG-PRGGLIMTNHADL--------AKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRD 291 (433)
Q Consensus 226 ~-AD----vvt~sTHKtl~G-PrgGiI~~~~~e~--------~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~ 291 (433)
. +| ++|.||||+|.| -|+.+|..|+..+ .++++++..=-...+|.-.-+|++=|+.+.+..+.++.
T Consensus 340 ~gaddp~i~vtQStHK~LaafSQaS~IHvkd~hI~g~~r~v~~~rfn~a~mmh~STSPsY~L~ASLDv~A~m~~g~~G~~ 419 (720)
T PRK13578 340 LNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGESGRR 419 (720)
T ss_pred CCCCCCCEEEEEEHHHHHHHHCHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHH
T ss_conf 58777650466306555443222210122454346665667889999999877078808999998799999973121458
Q ss_pred HHHHHHHHHHHHHHHHHH--CCCC-----CCC----------------------------CC--CCCCEEEECC------
Q ss_conf 999999888999999861--6852-----334----------------------------58--8898126316------
Q gi|254780349|r 292 YAKQIVLNSQALAKKLQF--LGFD-----IVS----------------------------GG--TDNHLMLVDL------ 328 (433)
Q Consensus 292 Ya~qvv~NA~~La~~L~~--~G~~-----vv~----------------------------gg--Td~H~vlvdl------ 328 (433)
..+.+++.|...-+.+.+ +.|+ .+. |+ -+..+.++|-
T Consensus 420 L~~e~i~~aie~Rk~il~~~~~~k~~~p~~v~g~~~~~~~~e~l~~d~~~w~~~Pg~~WHGf~g~~~~~~~lDP~Klti~ 499 (720)
T PRK13578 420 LWMDCVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLT 499 (720)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCCCCCCCCEECCCCEEEEE
T ss_conf 99999999999999998654442255752126860354888886125010246887422465555766342267379985
Q ss_pred -----------CCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf -----------6556767999998885671880378998999988898512246667307999899999999999
Q gi|254780349|r 329 -----------RSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIA 392 (433)
Q Consensus 329 -----------~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~ 392 (433)
...|+.+...++.|.+.||++-|.. ..+- + .+.|-|-.+.++..+-+-+.
T Consensus 500 tPGi~~~~g~~~~~GIpA~il~~yLre~gIvvEktd----l~~I-----L-----fL~T~G~t~~k~~~Lv~aL~ 560 (720)
T PRK13578 500 TPGIDAETGEYEDFGVPATILANYLRENGIVPEKCD----LNSI-----L-----FLLTPAEDMAKLQQLVAMLA 560 (720)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECC----CCEE-----E-----EEECCCCCHHHHHHHHHHHH
T ss_conf 367455665421368758999999987690798547----7507-----9-----99726788899999999999
No 110
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.63 E-value=6.1e-14 Score=117.57 Aligned_cols=251 Identities=17% Similarity=0.097 Sum_probs=166.8
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00679999999999999871886301000016799999999831548748812334484111476654333332201366
Q gi|254780349|r 73 GCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 73 G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
|+--.+.+| ++...|-+++.|-+-+ ||..|-.++++++++|||+|+..+.-.||-.. +-... .-.++
T Consensus 60 ~NPT~~~lE----~~la~LEg~~~a~~fs-SGmaAis~~ll~ll~~Gd~il~~~~~YggT~~------l~~~~--l~~~G 126 (395)
T PRK08114 60 GTLTHFSLQ----EAMCELEGGAGCALYP-CGAAAVANSILAFVEQGDHVLMTGTAYEPSQD------FCSKI--LSKLG 126 (395)
T ss_pred CCHHHHHHH----HHHHHHHCCCCEEEEC-CHHHHHHHHHHHHHCCCCEEEECCCCCHHHHH------HHHHH--HHHCC
T ss_conf 887699999----9999970997379826-88999999999970899989976888568999------99999--98759
Q ss_pred CCCCCC-CCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCC--CEEEECCCCHHHHHHHHCCCCCCCC-
Q ss_conf 583235-659899999998604667897055243--5363799998864179--7899186201244320001232200-
Q gi|254780349|r 153 VRKEDG-LLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIG--AYLMADISHISGLVVGGQHPSPVPH- 226 (433)
Q Consensus 153 ~d~~~~-~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~g--a~l~~D~aH~~GLIa~g~~~~Pl~~- 226 (433)
++-.-. .-|.+.+++.++ .+.|+|++.....| +..|++++.++|++.| +++++|.. .|...+++|+++
T Consensus 127 i~v~~~d~~d~~~~~~~i~-~~Tklv~~EspsNP~l~v~Di~~i~~~a~~~~~~~~~vvDNT-----fatP~~~~Pl~~G 200 (395)
T PRK08114 127 VTTTWFDPLIGADIAKLIQ-PNTKVVFLESPGSITMEVHDIPAIVAAVRSVAPDAVIMIDNT-----WAAGVLFKALDFG 200 (395)
T ss_pred CEEEEECCCCHHHHHHHCC-CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCC-----CCCCCCCCCCCCC
T ss_conf 5699857999999997468-775499994489866522679999999986056868997188-----7887655444666
Q ss_pred CCEEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Q ss_conf 2356740456522567---4489833620565016646543223445566689999999973564899999999888999
Q gi|254780349|r 227 CHIVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQAL 303 (433)
Q Consensus 227 ADvvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~L 303 (433)
||||..|+.|-+.|.- ||.+.+++ ++++++.+.-+ +.|+. ++-..+-. +..-++ -...-.++--+||..+
T Consensus 201 aDivihS~TKyl~GHsDv~~G~v~~~~-~~~~~l~~~~~--~~G~~-~~p~~a~L--l~RGL~-TL~lRm~~~~~nA~~v 273 (395)
T PRK08114 201 IDISIQAGTKYLIGHSDAMIGTAVANA-RCWEQLRENSY--LMGQM-VDADTAYM--TSRGLR-TLGVRLKQHQESSLKV 273 (395)
T ss_pred CEEEEEECCCEECCCCCCEEEEEECCH-HHHHHHHHHHH--HHCCC-CCHHHHHH--HHCCCC-CHHHHHHHHHHHHHHH
T ss_conf 749999666500577885247885278-89999999999--73787-99799999--975676-3889999999999999
Q ss_pred HHHHHHCC-C-CCCCCCCCCC---------------EEEECCCCCCCCHHHHHHHHHHCCEEEE
Q ss_conf 99986168-5-2334588898---------------1263166556767999998885671880
Q gi|254780349|r 304 AKKLQFLG-F-DIVSGGTDNH---------------LMLVDLRSKRMTGKRAESILGRVSITCN 350 (433)
Q Consensus 304 a~~L~~~G-~-~vv~ggTd~H---------------~vlvdl~~~~~~G~~a~~~Le~~gI~~N 350 (433)
|+.|.++- . .|...|-.+| ++-++++. +++..++.+.|+...+...
T Consensus 274 A~~L~~hp~V~~V~yPgL~shp~h~la~~~~~g~gg~~sf~l~~-~~~~~~~~~fl~~l~lf~~ 336 (395)
T PRK08114 274 AEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKK-KLTDEELANYLDNFSLFSM 336 (395)
T ss_pred HHHHHCCCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEEEECC-CCCHHHHHHHHHCCCCCEE
T ss_conf 99996399975898999989843899997578987799999857-7799999999980892658
No 111
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.63 E-value=2.2e-14 Score=120.68 Aligned_cols=214 Identities=15% Similarity=0.075 Sum_probs=149.5
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00679999999999999871886301000016799999999831548748812334484111476654333332201366
Q gi|254780349|r 73 GCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 73 G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
|+--.+.+| ++...|-|++.|-+ .-||+.|-.++++++++|||+|+..+--.||-...-.. .+...+.++..+
T Consensus 59 ~NPT~~~lE----~~la~LEgg~~a~~-~~SGmaAi~~~ll~ll~~Gdhiv~~~~~YggT~~l~~~-~l~~~Gi~v~~v- 131 (394)
T PRK09028 59 GTPTHFAFQ----AAIAELEGGAGTAL-YPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDK-ILAGFGIETTYY- 131 (394)
T ss_pred CCHHHHHHH----HHHHHHHCCCCEEE-ECCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHH-HHHHCCEEEEEE-
T ss_conf 887799999----99999819987798-45999999999999847998787069986277999998-886567479995-
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCE
Q ss_conf 583235659899999998604667897055243--53637999988641797899186201244320001232200-235
Q gi|254780349|r 153 VRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHI 229 (433)
Q Consensus 153 ~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADv 229 (433)
|+ -|.+.+++.++ .+.|+|++.....| ...|++.+.+||++.|+.+++|.. .|...+++||++ |||
T Consensus 132 -d~----~~~~~~~~~i~-~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNT-----fatP~~~~Pl~~GaDi 200 (394)
T PRK09028 132 -DP----MIGEGIRELIR-PNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNT-----WASPINSRPFEMGVDI 200 (394)
T ss_pred -CC----CCHHHHHHHCC-CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCC-----CCCHHCCCCHHCCCCE
T ss_conf -79----99899985368-7726999955899875236899999999983987996376-----4312206821207988
Q ss_pred EEECCCCCCCCCC---CEEEEECCCCHHHHCCHHH-CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Q ss_conf 6740456522567---4489833620565016646-54322344556668999999997356489999999988899999
Q gi|254780349|r 230 VTTTTHKSLRGPR---GGLIMTNHADLAKKINSAI-FPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAK 305 (433)
Q Consensus 230 vt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~av-fPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~ 305 (433)
|..|+.|.+.|-- ||.+.+++ +++++|.... .-|..-+|+ .+-. .++- ++ -.....+|-.+||..+|+
T Consensus 201 vvhS~TKyi~GHsDv~~G~v~~~~-~~~~~l~~~~~~~G~~~sP~----~a~L-~lRG-L~-TL~lRm~r~~~nA~~vA~ 272 (394)
T PRK09028 201 SIQAATKYIVGHSDVMLGTATANE-KHWDQLREQSYLMGQCTSPD----DVYL-AARG-LR-TLGVRLAQHEKNALKVAN 272 (394)
T ss_pred EEEECCCEECCCCCCCCEEEECCH-HHHHHHHHHHHHHCCCCCHH----HHHH-HHHC-CC-CHHHHHHHHHHHHHHHHH
T ss_conf 998277010488774031674688-99999999998716778878----9999-9836-78-599999999999999999
Q ss_pred HHHHCCC
Q ss_conf 9861685
Q gi|254780349|r 306 KLQFLGF 312 (433)
Q Consensus 306 ~L~~~G~ 312 (433)
.|.++.-
T Consensus 273 ~L~~hp~ 279 (394)
T PRK09028 273 WLATRPE 279 (394)
T ss_pred HHHCCCC
T ss_conf 9860999
No 112
>PRK02769 histidine decarboxylase; Provisional
Probab=99.63 E-value=6e-13 Score=110.66 Aligned_cols=287 Identities=17% Similarity=0.186 Sum_probs=197.2
Q ss_pred HHHCH-HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC--HHHHHHHHHHHHHHHHH
Q ss_conf 78589-9999999999999838881043010298999983051028865798887533600--67999999999999987
Q gi|254780349|r 15 IESDP-DVFSLIGQESCRQNDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGC--QYVDDIENIAIERAKKL 91 (433)
Q Consensus 15 ~~~Dp-ei~~~i~~e~~rq~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~--~~~d~iE~la~~~a~~l 91 (433)
...|. ++.++-..=..+|+..|----+.++--......+.-.+.| -|-|.. .|+ -..-++|...++...+|
T Consensus 4 ~~~~~~~l~~~~~~~~~~~~~~~GYp~~~~~dy~~l~~~l~~~~NN---~Gdp~~---~~~y~~~s~~~E~eVl~~~a~L 77 (380)
T PRK02769 4 SPADQKEIEDFWLYLRHNQYFNVGYPEAADFDYSALKRFFSFSINN---CGDPYS---KSNYPLNSFDFERDVMNFFAEL 77 (380)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC---CCCCCC---CCCCCCCCHHHHHHHHHHHHHH
T ss_conf 8788999999999999642210379842576867789986266445---789875---5877743089999999999998
Q ss_pred CCCCC----EECCCHHHHHHHHHHHHHH--HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 18863----0100001679999999983--15487488123344841114766543333322013665832356598999
Q gi|254780349|r 92 FNVNF----VNVQSHSGSQMNQGVFLAL--MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEI 165 (433)
Q Consensus 92 F~a~~----anvqp~SG~~An~av~~AL--l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~ 165 (433)
|++.+ =-|-+ +||.+|+..+.+- .-|.. ++-. +.-.|.|-.+...+.+.....++ .+ +++.+|++++
T Consensus 78 ~~~~~~~~wGyvTs-GGTE~Nl~al~~ARe~~p~~-vl~~--Se~aHYSi~Kaa~llgi~~~~V~--~~-~~G~md~~~L 150 (380)
T PRK02769 78 FKIPFNESWGYITN-GGTEGNLYGCYLARELFPDG-TLYY--SKDTHYSVSKIARLLRIKSRVIT--SL-PNGEIDYDDL 150 (380)
T ss_pred HCCCCCCCCEEEEC-CHHHHHHHHHHHHHHHCCCC-EEEE--CCCCHHHHHHHHHHCCCCCEEEC--CC-CCCCCCHHHH
T ss_conf 58995458779906-55499999999999867996-8996--67322779999998399870736--79-9994979999
Q ss_pred HHHHHHH--CCCEEEE--ECCCCCCCCCHHHHHHHHHHCCC---EEEECCCCHHHHHH-HHCCCCCCCC---CCEEEECC
Q ss_conf 9999860--4667897--05524353637999988641797---89918620124432-0001232200---23567404
Q gi|254780349|r 166 ESLAIEY--NPKLIIV--GGTAYSRVWDWERFRSIADSIGA---YLMADISHISGLVV-GGQHPSPVPH---CHIVTTTT 234 (433)
Q Consensus 166 ~~~a~~~--kPklIi~--G~S~y~~~~d~~~l~eIa~~~ga---~l~~D~aH~~GLIa-~g~~~~Pl~~---ADvvt~sT 234 (433)
++.+++. +|-+|++ |.+.+.-.-|++++++||++.|. |+++|+| +.|.+. --.++.+++. +|-++-+.
T Consensus 151 ~~~i~~~~~~P~iv~at~GTT~~GaiD~i~~i~~i~~~~g~~~~wlHvDaA-~gG~~lpf~~~~~~~~~~~~~dSis~d~ 229 (380)
T PRK02769 151 ISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAA-LSGMILPFVNNPPPFSFADGIDSIAISG 229 (380)
T ss_pred HHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECC-CCCEEEECCCCCCCCCCCCCCCEEEECC
T ss_conf 999996799877999964798886718999999999982998427984120-2332433267754578988889799877
Q ss_pred CCCCCCCC-CEEEEECCCCHHHHCCH------HHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 56522567-44898336205650166------465432234455666899999999735648999999998889999998
Q gi|254780349|r 235 HKSLRGPR-GGLIMTNHADLAKKINS------AIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKL 307 (433)
Q Consensus 235 HKtl~GPr-gGiI~~~~~e~~~~i~~------avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L 307 (433)
||-+..|- +|++++|+ ++.+++.. +.-+.++|+---+.++++-.+++..-...|++-+++++++|+.|.+.|
T Consensus 230 HK~~~~p~~~gv~l~r~-~~~~~~~~~~~Yi~s~d~TI~GSR~G~~~~~~W~~l~~lG~~Gy~~~v~~~~~~A~yl~~~L 308 (380)
T PRK02769 230 HKFIGSPMPCGIVLAKK-KYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRL 308 (380)
T ss_pred CCCCCCCCCEEEEEEEH-HHHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 34578877559999872-56541143687037898224425766789999999998789889999999999999999999
Q ss_pred HHCCCCCCC
Q ss_conf 616852334
Q gi|254780349|r 308 QFLGFDIVS 316 (433)
Q Consensus 308 ~~~G~~vv~ 316 (433)
.++|++++.
T Consensus 309 ~~~Gi~~~~ 317 (380)
T PRK02769 309 QANGIPAWR 317 (380)
T ss_pred HHCCCCEEE
T ss_conf 872987470
No 113
>pfam01053 Cys_Met_Meta_PP Cys/Met metabolism PLP-dependent enzyme. This family includes enzymes involved in cysteine and methionine metabolism. The following are members: Cystathionine gamma-lyase, Cystathionine gamma-synthase, Cystathionine beta-lyase, Methionine gamma-lyase, OAH/OAS sulfhydrylase, O-succinylhomoserine sulfhydrylase All of these members participate is slightly different reactions. All these enzymes use PLP (pyridoxal-5'-phosphate) as a cofactor.
Probab=99.63 E-value=2.7e-14 Score=120.03 Aligned_cols=247 Identities=21% Similarity=0.219 Sum_probs=164.5
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00679999999999999871886301000016799999999831548748812334484111476654333332201366
Q gi|254780349|r 73 GCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 73 G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
|+--.+.+| ++..+|-|+++|-+ .-||..|-.++++++++|||+|+..+--.||-.. +-.. ....++
T Consensus 50 ~nPt~~~le----~~la~LEg~~~a~~-~~SGmaAi~~~ll~l~~~Gd~il~~~~~Yg~t~~------~~~~--~l~~~G 116 (381)
T pfam01053 50 GNPTRDALE----ERIAALEGGEAALA-FSSGMAAIFAALLALLKAGDHVVATDDLYGGTYR------LFEK--VLPRFG 116 (381)
T ss_pred CCHHHHHHH----HHHHHHHCCCEEEE-ECCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHH------HHHH--HHHHCC
T ss_conf 886799999----99999819973899-3588999999997557999989995787375899------9999--887158
Q ss_pred CCCCCCC-CCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CC
Q ss_conf 5832356-59899999998604667897055243--53637999988641797899186201244320001232200-23
Q gi|254780349|r 153 VRKEDGL-LDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CH 228 (433)
Q Consensus 153 ~d~~~~~-ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-AD 228 (433)
++-.-.. -|.+++++.+ +.++|+|++.....| ...|++++++||++.|+++++|.. .+++++++|+++ ||
T Consensus 117 i~v~~~d~~d~~~~~~~i-~~~T~li~~EspsNP~l~v~Di~~ia~iA~~~gi~~vVDNT-----~atP~~~~Pl~~GaD 190 (381)
T pfam01053 117 IEVTFVDPSDLDALEAAI-KPNTKAVFLETPTNPLLKVVDIEAIAKIAKKHGALVVVDNT-----FASPYLQRPLELGAD 190 (381)
T ss_pred CEEEEECCCCHHHHHHHC-CCCCEEEEEECCCCCCEEECCCHHHHHHHHHCCCEEEEECC-----CCHHHHCCCHHCCCC
T ss_conf 506762665867899755-88842999974899860512609999998645735998788-----600521241330797
Q ss_pred EEEECCCCCCCCCC---CEEEEECC-CCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Q ss_conf 56740456522567---44898336-205650166465432234455666899999999735648999999998889999
Q gi|254780349|r 229 IVTTTTHKSLRGPR---GGLIMTNH-ADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALA 304 (433)
Q Consensus 229 vvt~sTHKtl~GPr---gGiI~~~~-~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La 304 (433)
||..|..|.+.|-- ||.|.+|. .++.++|.... ...|+..-..-|-++ ++- + .-+..-.+|..+||..+|
T Consensus 191 ivvhS~TKyi~GhsDvl~G~v~~~~~~~~~~~l~~~~--~~~G~~~~p~~a~l~--~rg-l-~TL~lR~~~~~~nA~~lA 264 (381)
T pfam01053 191 IVVHSATKYIGGHSDVVGGVVVVNGREELAKRLRFLQ--NATGAVLSPFDAWLL--LRG-L-KTLGLRMERHQENALKLA 264 (381)
T ss_pred EEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHH--HHHCCCCCHHHHHHH--HHC-C-CCHHHHHHHHHHHHHHHH
T ss_conf 7997534303688761305999688266899999999--861687886888998--714-7-879999999888999999
Q ss_pred HHHHHCCC--CCCCCCCC---------------CCEEEECCCCCCCCHHHHHHHHHHCCEE
Q ss_conf 99861685--23345888---------------9812631665567679999988856718
Q gi|254780349|r 305 KKLQFLGF--DIVSGGTD---------------NHLMLVDLRSKRMTGKRAESILGRVSIT 348 (433)
Q Consensus 305 ~~L~~~G~--~vv~ggTd---------------~H~vlvdl~~~~~~G~~a~~~Le~~gI~ 348 (433)
+.|....- +|..-|-. .-++-+++++ +.++.+.+++..+.
T Consensus 265 ~~L~~hp~V~~V~yPgL~s~p~~~~~~r~~~g~ggl~sf~l~~----~~~~~~f~d~l~lf 321 (381)
T pfam01053 265 EFLEEHPKVEKVYYPGLPSHPGHELAKKQMSGFGGMLSFELKG----GEAASKFLDNLKLF 321 (381)
T ss_pred HHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECC----HHHHHHHHHHCCCC
T ss_conf 9997299977795758999804999997589999731898678----99999999847713
No 114
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.63 E-value=3.1e-13 Score=112.70 Aligned_cols=333 Identities=17% Similarity=0.158 Sum_probs=202.1
Q ss_pred HHHHHHHHCCCCCCCCCC--CCHHHHHHHHCCCC----CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCE-EC
Q ss_conf 999999838881043010--29899998305102----886579888753360067999999999999987188630-10
Q gi|254780349|r 27 QESCRQNDEIQLIASENI--VSRAVLEAQGSILT----NKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFV-NV 99 (433)
Q Consensus 27 ~e~~rq~~~l~LiASEN~--~S~~v~~~l~S~l~----nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~a-nv 99 (433)
++..+.++-|+|-..||- +||.|++++.-.+. ++|.. . .|. -+--|.+ .+-++.+.. +|
T Consensus 16 ~~~~~~~diI~L~~~e~~~~~p~~v~~a~~~~~~~~~~~~Y~~----~---~g~--~~Lr~ai-----a~~~~~~~~~ei 81 (375)
T PRK06225 16 DELFKKPELIWLGQNTNHLHPHPEVRDAMIRAAKEGEYNKYAP----P---EGF--EELRELI-----LADLGLDDDFDA 81 (375)
T ss_pred HHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC----C---CCH--HHHHHHH-----HHHHCCCCCCEE
T ss_conf 9971799906899998998857999999999964898788799----6---358--9999999-----998688999749
Q ss_pred CCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC-CCCCCHHHHHHHHHHHCCCE
Q ss_conf 0001679-99999998315487488123344841114766543333322013665-832-35659899999998604667
Q gi|254780349|r 100 QSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNV-RKE-DGLLDMHEIESLAIEYNPKL 176 (433)
Q Consensus 100 qp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~-d~~-~~~ID~d~~~~~a~~~kPkl 176 (433)
-..+|+. |-..++.++++|||.|+..+....++.. .....| .+.+.+++ +++ +..+|.|++++.+ ..++|+
T Consensus 82 ~vt~G~~~~l~~~~~a~~~pGD~vl~~~P~y~~y~~---~~~~~g--~~~~~vpl~~~~~~~~~d~d~l~~~i-~~~tk~ 155 (375)
T PRK06225 82 LVTAGATESLYLVIRAFLSPGTNTVTSDPGYKIIDN---FANRFG--AEVIEVPIYSEECDYKLTPEALKENV-DEETKL 155 (375)
T ss_pred EECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH---HHHHCC--CEEEECCCCCCCCCCCCCHHHHHHHC-CCCCCE
T ss_conf 982788999999999977998989984898335999---999849--90574576685468878999999628-888828
Q ss_pred EEEECCCCC--CC---CCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCC---CEEEECCCCCC--CCCCCEEE
Q ss_conf 897055243--53---6379999886417978991862012443200012322002---35674045652--25674489
Q gi|254780349|r 177 IIVGGTAYS--RV---WDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHC---HIVTTTTHKSL--RGPRGGLI 246 (433)
Q Consensus 177 Ii~G~S~y~--~~---~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~A---Dvvt~sTHKtl--~GPrgGiI 246 (433)
|++-....| .. -++++|.++|.+.+.+++.|.++.- + +.+ ++..+... -|+..|.-|++ +|=|-|.+
T Consensus 156 i~l~nPnNPTG~v~s~~~l~~l~~~a~~~~i~ii~DE~Y~~-f-~~~-~~~~~~~~~~~~iv~~S~SK~~~~~G~RiG~~ 232 (375)
T PRK06225 156 IVLIDPLNPLGSSYTREEIKEFAEIARDNDAYLVHDCTYRD-F-ARE-HTLAAEYAPEGTVTIYSFSKIFGLAGLRIGAV 232 (375)
T ss_pred EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH-C-CCC-CCCHHHHCCCCEEEECCCCHHCCCHHHHHHHH
T ss_conf 99829989988878899999999999862770000221332-0-678-87234537787599823605135734405141
Q ss_pred EECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCEE
Q ss_conf 8336205650166465432234455666899999999735648-999999998889999998616-85233458889812
Q gi|254780349|r 247 MTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEF-RDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHLM 324 (433)
Q Consensus 247 ~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f-~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~v 324 (433)
+.++ ++.+++.+...+-+ +.+.+.+.|+.+ +| + ..++| ....+...+|.+.+.+.|.+. |+.+-.-.++...+
T Consensus 233 i~~~-~~i~~l~~~~~~~~-~~~~~~q~aa~a-al-~-~~~~~~~~~~~~~~~~r~~~~~~l~~l~g~~~~~~p~~g~f~ 307 (375)
T PRK06225 233 VAAP-DLLEQVAKYVVSDL-GANVIAQEAAIA-GL-K-VKSEWIERIRREDFRNQALIKEAVDEIEGVFLPVYPSHANML 307 (375)
T ss_pred CCCH-HHHHHHHHHHCCCC-CCCHHHHHHHHH-HH-H-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEE
T ss_conf 0799-99999998743878-878999999999-98-4-899999999999999999999998537388516707974599
Q ss_pred EECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 631665567679999988856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 325 LVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 325 lvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
|+++.+.|++..+..+.|.+.||.+---...+. .+-..-|||.- |..++++++--+-|.++|.
T Consensus 308 ~~~~~~~g~~~~~~~~~l~e~gV~v~pG~~~~~---~~g~~~iRis~------~~~~e~l~~a~~rl~~~l~ 370 (375)
T PRK06225 308 VIDTSEAGIRPEDLVEYLLERKIFVRQGTYTSK---RFGDRFIRVSF------SIPREWVERFCEEFPDVVA 370 (375)
T ss_pred EEECCCCCCCHHHHHHHHHHCCEEEECCCCCCC---CCCCCEEEEEE------ECCHHHHHHHHHHHHHHHH
T ss_conf 998668898999999999978909968986788---78999299997------0489999999999999999
No 115
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.63 E-value=7.9e-14 Score=116.79 Aligned_cols=220 Identities=18% Similarity=0.145 Sum_probs=147.5
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00679999999999999871886301000016799999999831548748812334484111476654333332201366
Q gi|254780349|r 73 GCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 73 G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
|+--.+.+| ++..+|=|++.|-+-+ ||..|-.++++++++|||+|+..+--.||-...-. ...-.|+
T Consensus 67 gNPT~~~lE----~~la~LEgg~~a~~~s-SGmAAI~~~ll~ll~~Gdhiv~~~~lYggT~~l~~--------~~l~~~G 133 (437)
T PRK05613 67 TNPTVEALE----NRIASLEGGVHAVAFA-SGQAATTAAILNLAGAGDHIVTSPRLYGGTETLFL--------VTLNRLG 133 (437)
T ss_pred CCHHHHHHH----HHHHHHHCCCCEEEEC-CHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH--------HHHHHCC
T ss_conf 887899999----9999983998589965-89999999999972889989978987634789977--------6775168
Q ss_pred CCCCC--CCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-C
Q ss_conf 58323--5659899999998604667897055243--53637999988641797899186201244320001232200-2
Q gi|254780349|r 153 VRKED--GLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-C 227 (433)
Q Consensus 153 ~d~~~--~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-A 227 (433)
+.-.. ..-|.+.+++. .+.+.|+|++..-..| ...|++.+.+||++.|+.+++|..- |...+++||++ |
T Consensus 134 I~~~fvd~~~d~~~~~~~-i~~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTf-----atP~~~~Pl~~Ga 207 (437)
T PRK05613 134 IETTFVENPDDPESWQAA-VQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIIDNTI-----ATAALVRPLELGA 207 (437)
T ss_pred CEEEEECCCCCHHHHHHH-CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCC-----CCHHCCCHHHHCC
T ss_conf 158994799999999973-7878559999879998653357999999998769839951665-----2031068567489
Q ss_pred CEEEECCCCCCCCCC---CEEEEECCC-CHH-HHCCHHHCHHHHHHH-HHH-----HHHHHHHHHH----------HHHC
Q ss_conf 356740456522567---448983362-056-501664654322344-556-----6689999999----------9735
Q gi|254780349|r 228 HIVTTTTHKSLRGPR---GGLIMTNHA-DLA-KKINSAIFPGLQGGP-FMH-----SIAAKAVAFG----------EALS 286 (433)
Q Consensus 228 Dvvt~sTHKtl~GPr---gGiI~~~~~-e~~-~~i~~avfPg~qg~~-~~~-----~iaa~aval~----------Ea~~ 286 (433)
|||..|+.|-+.|-- ||+|+.+.. ++. ++..+.+||.+...- ..| .++..+..++ -.+.
T Consensus 208 DiVvhS~TKYl~GHsDvlgG~vv~~~~~~w~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~a~~~~~r~~~~~~~G~~ls 287 (437)
T PRK05613 208 DVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARVGLLRDTGATLS 287 (437)
T ss_pred CEEEEECCCCCCCCCCEEEEEEEECCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 88999555122688764516998468542222102332243346873777411565411167799999999985156788
Q ss_pred H-----------HHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 6-----------489999999988899999986168
Q gi|254780349|r 287 S-----------EFRDYAKQIVLNSQALAKKLQFLG 311 (433)
Q Consensus 287 ~-----------~f~~Ya~qvv~NA~~La~~L~~~G 311 (433)
| -.....++-.+||..+|+.|.+.-
T Consensus 288 P~~a~L~lrGL~TL~lRm~r~~~nA~~vA~~L~~hp 323 (437)
T PRK05613 288 PFNAWAAVQGLDTLSLRLERHNENAIKVAEFLNNHE 323 (437)
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 488899873675088999999999999999985099
No 116
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.63 E-value=2.5e-14 Score=120.32 Aligned_cols=246 Identities=17% Similarity=0.155 Sum_probs=165.3
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00679999999999999871886301000016799999999831548748812334484111476654333332201366
Q gi|254780349|r 73 GCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 73 G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
|+--++.+| ++...|-|++.|-+ .-||..|-.++++++++|||+|+..+--.||-...=. -..-.++
T Consensus 51 gNPT~~~lE----~~la~LEg~~~a~~-~sSGmaAi~~~l~~ll~~Gd~iv~~~~~Yggt~~l~~--------~~l~~~G 117 (370)
T PRK07582 51 SNPTWRQLE----SALGELEGGAAALV-FGSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAR--------EYLAPLG 117 (370)
T ss_pred CCHHHHHHH----HHHHHHCCCCEEEE-ECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH--------HHHHHCC
T ss_conf 986899999----99999719971898-6487999999999970899989977887779999999--------8875068
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCE
Q ss_conf 583235659899999998604667897055243--53637999988641797899186201244320001232200-235
Q gi|254780349|r 153 VRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHI 229 (433)
Q Consensus 153 ~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADv 229 (433)
++- ..+|.+...+.+. .+.|+|++..-..| ...|++++++||++.|+++++|..- |...+++|+++ |||
T Consensus 118 i~v--~~~~~~d~~~~~~-~~tklv~~EspsNP~l~v~Di~~ia~~A~~~gi~~vVDNT~-----atP~~~~Pl~~GADi 189 (370)
T PRK07582 118 VTV--REAPTAGMAEAAA-GAADLVLAETPSNPGLDVVDLARLARACHAAGALLVVDNTT-----ATPLGQRPLELGADL 189 (370)
T ss_pred EEE--EECCCHHHHHHHC-CCCCEEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECCC-----CCHHHCCCHHCCCCE
T ss_conf 168--9538551787722-57738999779998865335388899998769969998898-----406424800218986
Q ss_pred EEECCCCCCCCCC---CEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6740456522567---4489833620565016646543223445566689999999973564899999999888999999
Q gi|254780349|r 230 VTTTTHKSLRGPR---GGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKK 306 (433)
Q Consensus 230 vt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~ 306 (433)
|..|+.|.+.|.- ||.+.++++++.+++.+.- ...|..++-..+-. .++- ++ -...-.+|--+||..+|+.
T Consensus 190 vvhS~TKYl~Ghsd~lgG~v~~~~~~~~~~~~~~~---~~~G~~~sP~~a~l-llrG-l~-TL~lRm~r~~~nA~~lA~~ 263 (370)
T PRK07582 190 VVASDTKALSGHSDLLAGYVAGRDPELMAAVERWR---LLAGAIPGPFEAWL-AHRS-LA-TLGLRFERQCQNALAVAEL 263 (370)
T ss_pred EEEEECEEECCCCCCCCEEEECCCHHHHHHHHHHH---HHCCCCCCHHHHHH-HHHH-CC-CHHHHHHHHHHHHHHHHHH
T ss_conf 98850435247887403287258888999999999---85288788788999-9861-08-6889999998789999999
Q ss_pred HHHCC-CC-CCCCCCCCC---------------EEEECCCCCCCCHHHHHHHHHHCCEEE
Q ss_conf 86168-52-334588898---------------126316655676799999888567188
Q gi|254780349|r 307 LQFLG-FD-IVSGGTDNH---------------LMLVDLRSKRMTGKRAESILGRVSITC 349 (433)
Q Consensus 307 L~~~G-~~-vv~ggTd~H---------------~vlvdl~~~~~~G~~a~~~Le~~gI~~ 349 (433)
|.+.- +. |..-|=.+| ++-+++. +...+.+.+++..+..
T Consensus 264 L~~hp~V~~V~yPgL~s~p~h~la~k~~~g~Gg~~sf~l~----~~~~~~~f~~~l~l~~ 319 (370)
T PRK07582 264 LREHPAVRGLRYPGLPEDPAHAVARAQMRRFGGLVSFELA----DAEAVEAFVDRSRLLV 319 (370)
T ss_pred HHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEC----CHHHHHHHHHHCCCCE
T ss_conf 9709996778898999981399999868998738999979----9999999998179472
No 117
>PRK07367 consensus
Probab=99.63 E-value=2.8e-12 Score=106.00 Aligned_cols=353 Identities=14% Similarity=0.116 Sum_probs=207.9
Q ss_pred HHHHHHCHHHH-HHHHHHHHHH---HHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH-HHHH
Q ss_conf 46978589999-9999999999---83888104301--0298999983051028865798887533600679999-9999
Q gi|254780349|r 12 QSLIESDPDVF-SLIGQESCRQ---NDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDI-ENIA 84 (433)
Q Consensus 12 ~~l~~~Dpei~-~~i~~e~~rq---~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~i-E~la 84 (433)
+-+++..|... ++.+.-.+++ ++.|+|-..+- -++|.+.+++...+..... | |+-..-..++ |.++
T Consensus 3 ~r~~~~~~s~~~~i~~~a~~~~~~G~dvi~l~~G~pd~~~p~~i~~a~~~~~~~~~~-~------Y~~~~G~~~lR~aia 75 (385)
T PRK07367 3 QRVGQVTPSLTLAIAAKAKAMKAEGLDVCSFSAGEPDFDTPAHIKAAAKKALDEGKT-R------YGPAAGEPALREAIA 75 (385)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCC-C------CCCCCCCHHHHHHHH
T ss_conf 556508936999999999999977998178989999998789999999999865887-7------799999899999999
Q ss_pred HHHHHHHCCCC--CEECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC
Q ss_conf 99999871886--30100001679-999999983154874881233448411147665433333220136658323-565
Q gi|254780349|r 85 IERAKKLFNVN--FVNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-GLL 160 (433)
Q Consensus 85 ~~~a~~lF~a~--~anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~~I 160 (433)
+..++-||.+ .-||-..+|++ |...++.+|++|||+|+..+...-++. ..+.....+.+.++.++++ ..+
T Consensus 76 -~~~~~~~g~~~~~d~I~it~G~~~al~~~~~~l~~pGD~Vlv~~P~y~~y~-----~~~~~~g~~~v~v~~~~~~~~~~ 149 (385)
T PRK07367 76 -HKLRRENGLDYQAENILVTNGGKQSLYNLMMALIDPGDEVIIPAPYWLSYP-----EMVKLAGGTPVIVPTDAATGFKI 149 (385)
T ss_pred -HHHHHHHCCCCCHHEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCH-----HHHHHCCCEEEEECCCCCCCCCC
T ss_conf -999998589998504999089899999999997489998999069877719-----99998098579921362127677
Q ss_pred CHHHHHHHHHHHCCCEEEEECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHH-CCCCCCCC-----CC-
Q ss_conf 9899999998604667897055243-----536379999886417978991862012443200-01232200-----23-
Q gi|254780349|r 161 DMHEIESLAIEYNPKLIIVGGTAYS-----RVWDWERFRSIADSIGAYLMADISHISGLVVGG-QHPSPVPH-----CH- 228 (433)
Q Consensus 161 D~d~~~~~a~~~kPklIi~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g-~~~~Pl~~-----AD- 228 (433)
|.|++++.+ ..+.|++++-....| -.-+++++.++|.+.+.+++.|..| ..|+-.+ .+++.... -.
T Consensus 150 d~~~l~~~~-~~~~k~~il~~P~NPTG~v~s~~~l~~l~~~a~~~~~~iIsDEiY-~~l~f~~~~~~s~~~~~~~~~~~~ 227 (385)
T PRK07367 150 TPEQLRQAI-TPKTKLLVLNSPSNPTGMVYTPEEIAALAEVIVEHDLYVVSDEIY-EKILYDGAEHLSIGSLGPEIFQRT 227 (385)
T ss_pred CHHHHHHHC-CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCC-HHHCCCCCCCCCHHHHCCCCCCCC
T ss_conf 999999737-867749997899798785665788889988887558699711321-121058977778888594202464
Q ss_pred EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5674045652--25674489833620565016646543223445566689999999973564899999999888999999
Q gi|254780349|r 229 IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKK 306 (433)
Q Consensus 229 vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~ 306 (433)
|+..|.-|+| +|=|-|.+...+ ++.+++.+..-....+-+.+.+.++. .++ +......+...+...+|...|.+.
T Consensus 228 i~~~s~SK~~~~~G~RiG~~~~~~-~~i~~~~~~~~~~~~~~~~~~q~aa~-~al-~~~~~~~~~~~~~~~~rr~~l~~~ 304 (385)
T PRK07367 228 IISNGFAKAYSMTGWRVGYLAGPV-ELIKAASSIQSHSTSNVCTFAQYGAI-AAL-ESPQDCVEEMRQAFAERRQLMLDG 304 (385)
T ss_pred HHHCCCCCCCCCCCCEEEEEECCH-HHHHHHHHHHHHCCCCCCHHHHHHHH-HHH-HCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 010010003677612488785689-99999998542055545789999999-999-584989999999999999999999
Q ss_pred HHHC-CCCCCC-CCCCCCEEEECCCCCCCCHHHH-HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHH
Q ss_conf 8616-852334-5888981263166556767999-998885671880378998999988898512246667307999899
Q gi|254780349|r 307 LQFL-GFDIVS-GGTDNHLMLVDLRSKRMTGKRA-ESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKD 383 (433)
Q Consensus 307 L~~~-G~~vv~-ggTd~H~vlvdl~~~~~~G~~a-~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~e 383 (433)
|.+. |+.+.. .|+ -.+|+|++..+++..+. ++.|++.||.+. ||..=. ...-+||.-. ..+++
T Consensus 305 l~~~~~~~~~~P~G~--~~~w~~l~~~~~~~~~~~~~ll~~~gV~v~----PG~~Fg--~~~~~Rl~~a------~~~~~ 370 (385)
T PRK07367 305 LNAIPGLSCPKPEGA--FYVFVDISKTGLGSLEFCRQLLEEHHVAAI----PGIAFG--ADDHIRLSYA------TDLAT 370 (385)
T ss_pred HHHCCCCEECCCCEE--EEEEEECCCCCCCHHHHHHHHHHHCCEEEE----CCCCCC--CCCEEEEEEE------CCHHH
T ss_conf 983799675588847--999788899899999999999996999997----587469--9993999970------98999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999960
Q gi|254780349|r 384 FEYIGELIAQILD 396 (433)
Q Consensus 384 m~~iA~li~~~L~ 396 (433)
+++-.+-|.++|+
T Consensus 371 l~ea~~RL~~~l~ 383 (385)
T PRK07367 371 IEKGLERLERFVR 383 (385)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999998
No 118
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.63 E-value=2e-14 Score=120.92 Aligned_cols=247 Identities=19% Similarity=0.186 Sum_probs=161.5
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHH
Q ss_conf 88104301029899998305102886579888753360067999999999999987188630100001679999999983
Q gi|254780349|r 36 IQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLAL 115 (433)
Q Consensus 36 l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~AL 115 (433)
-+...|.+|.-+.+.++.. .+.++ .+||-=.|+ |+--.+.+| ++..+|-|++.|-+ .-||..|-.++++++
T Consensus 26 ~PIy~sstf~f~~~~~~~~-~~~~~-~~g~~YsR~--~nPT~~~lE----~~la~LEg~~~a~~-~sSGmaAi~~~ll~~ 96 (391)
T PRK08133 26 EALFLTSSFVFRSAAEAAA-RFAGE-EPGNTYSRF--TNPTVRMFQ----ERLAALEGAEACVA-TASGMAAILSVVMAL 96 (391)
T ss_pred CCCCCCCCEECCCHHHHHH-HHCCC-CCCCEEECC--CCHHHHHHH----HHHHHHHCCCEEEE-ECCHHHHHHHHHHHH
T ss_conf 8801776646198899998-73788-789543489--886699999----99999809975999-658899999999984
Q ss_pred HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHH
Q ss_conf 1548748812334484111476654333332201366583235659899999998604667897055243--53637999
Q gi|254780349|r 116 MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERF 193 (433)
Q Consensus 116 l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l 193 (433)
++|||+|+..+--.||-...-.. .+...+.++..+ |. -|.+++++.++ .+.|+|++.....| ...|++++
T Consensus 97 l~~Gd~iv~~~~~Yggt~~l~~~-~l~~~Gi~~~~v--d~----~d~~~~~~ai~-~~T~lv~~EtpsNP~l~v~Di~~i 168 (391)
T PRK08133 97 LQAGDHVVSSRSLFGSTLSLFEK-IFARFGIETTFV--DL----TDLDAWRAAVR-PNTKLFFLETPSNPLTELADIAAL 168 (391)
T ss_pred CCCCCEEEECCCCCCCHHHHHHH-HHHCCCEEEEEC--CC----CCHHHHHHHCC-CCCEEEEEECCCCCCCEEECCHHH
T ss_conf 57999899678974538999998-741078444467--98----79999997458-784599997899998665553999
Q ss_pred HHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHH-CHHHHHH
Q ss_conf 988641797899186201244320001232200-2356740456522567---4489833620565016646-5432234
Q gi|254780349|r 194 RSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAI-FPGLQGG 268 (433)
Q Consensus 194 ~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~av-fPg~qg~ 268 (433)
++||++.|+++++|.. .+...+++|+++ ||||..|+.|.+.|-- ||.|.++++.+.+++.... .-|..-+
T Consensus 169 ~~iA~~~g~~~vVDNT-----~atP~~~~Pl~~GaDivvhS~TKyi~GHsD~lgG~v~~~~~~~~~~~~~~~~~~G~~ls 243 (391)
T PRK08133 169 AEIAHAAGALLVVDNC-----FCTPALQQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSKEFIMEEVFGFLRTAGPTLS 243 (391)
T ss_pred HHHHHHCCCEEEEECC-----CCCCCCCCHHHHCCCEEEEECCCEECCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCC
T ss_conf 9998755875998789-----76524446566188379996660304888744489963679999999999997488889
Q ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 4556668999999997356489999999988899999986168
Q gi|254780349|r 269 PFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLG 311 (433)
Q Consensus 269 ~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G 311 (433)
|+ .+-.+. .- ++ -...-++|--+||..+|+.|.++-
T Consensus 244 P~----~a~l~l-rG-L~-TL~lRm~r~~~nA~~lA~~L~~hp 279 (391)
T PRK08133 244 PF----NAWVFL-KG-LE-TLSLRMEAHSANALELAEWLEAHP 279 (391)
T ss_pred CH----HHHHHH-CC-CC-CHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 32----778986-04-77-699999999999999999997099
No 119
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.62 E-value=1.7e-13 Score=114.46 Aligned_cols=247 Identities=17% Similarity=0.163 Sum_probs=163.0
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00679999999999999871886301000016799999999831548748812334484111476654333332201366
Q gi|254780349|r 73 GCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 73 G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
|+--.+.+| ++..+|=|++.|-+-+ ||..|-.++++ ++.+||+|+..+--.||-..-- .-.+...+.++..+
T Consensus 52 ~nPT~~~Le----~~la~LE~~~~a~~~~-SGmaAi~~~l~-~l~~Gd~vv~~~~~Yg~T~~l~-~~~l~~~Gi~~~f~- 123 (390)
T PRK08064 52 GNPTREALE----DIIAELEGGTKGFAFA-SGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMI-TEVLSRFGIEHTFV- 123 (390)
T ss_pred CCHHHHHHH----HHHHHHHCCCCEEEHH-HHHHHHHHHHH-HHCCCCEEEEECCCCCCHHHHH-HHHHHCCCEEEEEE-
T ss_conf 886699999----9999982997655023-39999999999-8679999998488856799999-86765098799997-
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCE
Q ss_conf 583235659899999998604667897055243--53637999988641797899186201244320001232200-235
Q gi|254780349|r 153 VRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHI 229 (433)
Q Consensus 153 ~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADv 229 (433)
|. -|.+++++.+ +.+.|+|++.....| +..|++++++||++.|+++++|.+- |+..+++||++ |||
T Consensus 124 -d~----~d~~~~~~~i-~~~Tklv~~EspsNP~l~v~Di~~i~~iA~~~g~~~vVDNT~-----atP~~~~Pl~~GaDi 192 (390)
T PRK08064 124 -DM----TNLEEVAQNI-KPNTKLFYVETPSNPLLKVTDIRGVVKLAKAHGCLTFVDNTF-----LTPLLQKPLDLGADV 192 (390)
T ss_pred -CC----CCHHHHHHHC-CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCC-----CCCCCCCHHHHCCCE
T ss_conf -88----5737799747-888459999789998874127199999998839969973773-----350436857748869
Q ss_pred EEECCCCCCCCCC---CEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6740456522567---4489833620565016646543223445566689999999973564899999999888999999
Q gi|254780349|r 230 VTTTTHKSLRGPR---GGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKK 306 (433)
Q Consensus 230 vt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~ 306 (433)
|..|+.|-+.|-- ||.+.++++++++++....- ..|+. ++--.+-. .++. +. -...-.+|-.+||.++|+.
T Consensus 193 vihS~TKyi~Ghsd~l~G~vv~~~~~~~~~~~~~~~--~~G~~-l~p~~a~l-~lrg-l~-TL~lRm~~~~~nA~~iA~~ 266 (390)
T PRK08064 193 VLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQN--SFGAV-LGVQDCWL-VLRG-LK-TLHVRLEHSAATANKIAQY 266 (390)
T ss_pred EEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHH--HCCCC-CCCHHHHH-HHHC-CC-CHHHHHHHHHHHHHHHHHH
T ss_conf 999636311588764041686178899999999998--50776-79056789-8725-68-6889999999999999999
Q ss_pred HHHCC--CCCCCCCCCCC---------------EEEECCCCCCCCHHHHHHHHHHCCEE
Q ss_conf 86168--52334588898---------------12631665567679999988856718
Q gi|254780349|r 307 LQFLG--FDIVSGGTDNH---------------LMLVDLRSKRMTGKRAESILGRVSIT 348 (433)
Q Consensus 307 L~~~G--~~vv~ggTd~H---------------~vlvdl~~~~~~G~~a~~~Le~~gI~ 348 (433)
|.+.. -+|..-|-.+| ++-+++. ++..+.+.++...+.
T Consensus 267 L~~hp~V~~V~yPgL~s~p~h~l~~~~~~g~Gg~~sf~l~----~~~~~~~f~~~l~l~ 321 (390)
T PRK08064 267 LQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ----SEEAVRQFVSKVKLP 321 (390)
T ss_pred HHHCCCCCEEECCCCCCCCCHHHHHHCCCCCCEEEEEEEC----CHHHHHHHHHHCCCC
T ss_conf 9719990679898999991499999628997149999989----999999999838826
No 120
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.62 E-value=2.5e-12 Score=106.32 Aligned_cols=361 Identities=12% Similarity=0.066 Sum_probs=206.5
Q ss_pred CCCCCCHHHHHHHHHHHCHHHHHHHH-HHHHHH---HHCCCCCCCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 97652036776469785899999999-999999---838881043010--298999983051028865798887533600
Q gi|254780349|r 1 MTIICKNRFFQQSLIESDPDVFSLIG-QESCRQ---NDEIQLIASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGC 74 (433)
Q Consensus 1 m~~~~~~~~~~~~l~~~Dpei~~~i~-~e~~rq---~~~l~LiASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~ 74 (433)
|+.+.-.+- +....|.....+. +=.+.+ ++-|+|--.|-- +++.+++++...+.+-. -||+- ..|.
T Consensus 1 ~~~~~~~~r----~~~~~~~~~~~~~~~a~~l~~~G~dvi~L~iG~pdf~~p~~i~~a~~~al~~~~-~~Y~~---~~G~ 72 (402)
T PRK06107 1 MSTFVPAAR----VSRIKPSPSTAAAARARELRAAGRSIVDLTVGEPDFDTPDHIKAAAVAAIERGE-TKYTL---VNGT 72 (402)
T ss_pred CCCCCHHHH----HHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCC---CCCC
T ss_conf 998885789----850997899999999999997799727788989899978999999999985599-99969---9888
Q ss_pred HHHHHHHHHHHHHHHHHCCCC--CEECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 679999999999999871886--30100001679-999999983154874881233448411147665433333220136
Q gi|254780349|r 75 QYVDDIENIAIERAKKLFNVN--FVNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPY 151 (433)
Q Consensus 75 ~~~d~iE~la~~~a~~lF~a~--~anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y 151 (433)
.++-+-..+..++-||.+ .-||-..+|++ |...++.++++|||.|+..+...-++. ......| .+.+.+
T Consensus 73 ---~eLReAia~~~~~~~g~~v~p~~I~vt~G~~~al~~~~~al~~pGD~Vlv~~P~Y~~y~---~~~~~~g--~~~~~~ 144 (402)
T PRK06107 73 ---PALRKAIIAKMERRNGLHYADNEICVGGGAKQAIFLALMATLEEGDEVIIPAPYWVSYP---DMVLAND--GTPVIV 144 (402)
T ss_pred ---HHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHH---HHHHHCC--CCEEEC
T ss_conf ---99999999999998689998204998688899999999995799998998168665379---9999839--956736
Q ss_pred CCCCCC-CCCCHHHHHHHHHHHCCCEEEEECCCCC--C---CCCHHHHHHHHHHC-CCEEEECCCCHHHHHHHHC-CCCC
Q ss_conf 658323-5659899999998604667897055243--5---36379999886417-9789918620124432000-1232
Q gi|254780349|r 152 NVRKED-GLLDMHEIESLAIEYNPKLIIVGGTAYS--R---VWDWERFRSIADSI-GAYLMADISHISGLVVGGQ-HPSP 223 (433)
Q Consensus 152 ~~d~~~-~~ID~d~~~~~a~~~kPklIi~G~S~y~--~---~~d~~~l~eIa~~~-ga~l~~D~aH~~GLIa~g~-~~~P 223 (433)
++++++ ..+|.|++++.+ ..++|+|++-....| . .-+++++.++|.+. +.+++.|..|- .|+-.+. +++.
T Consensus 145 p~~~~~~~~~d~d~le~~~-~~~tk~iil~~P~NPTG~v~s~~~l~~i~~i~~~~~~i~iisDEiY~-~l~~~~~~~~~~ 222 (402)
T PRK06107 145 PCPEEDGFKLTAEALEAAI-TPRTRWLILNAPSNPTGAAYSRDELRALADVLLRHPHVLVLTDDIYD-HIRFDDEPVTHL 222 (402)
T ss_pred CCCCCCCCCCCHHHHHHHC-CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHH-HHEECCCCCCCH
T ss_conf 8782348758999999745-64766999889989899665348999998877524893286222025-522189888868
Q ss_pred C---CC-CC--EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
Q ss_conf 2---00-23--5674045652--256744898336205650166465432234455666899999999735648999999
Q gi|254780349|r 224 V---PH-CH--IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQ 295 (433)
Q Consensus 224 l---~~-AD--vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~q 295 (433)
+ +. .| |+.+|.-|+| +|=|-|.+..++ ++.+++.+..--...+.+.+.+.|+ +.+|.+ -+...++..+.
T Consensus 223 ~~~~p~~~~~~i~i~s~SK~~~~~G~RiG~~v~~~-~li~~l~~~~~~~~~~~~~~~Q~aa-~~aL~~-~~~~~~~~~~~ 299 (402)
T PRK06107 223 LTAAPELRDRVLLTNGVSKTYAMTGWRIGYAAGPA-DLIAAINKLQSQSSSCPSSISQAAA-AAALNG-DQSFVAESVKV 299 (402)
T ss_pred HHHCHHHHCCCEEECCCCCCCCCCCCEEEEEEECH-HHHHHHHHHHHHCCCCCCHHHHHHH-HHHHHC-CHHHHHHHHHH
T ss_conf 98582442254474245345677662268998589-9999999996243468989999999-999968-84789999999
Q ss_pred HHHHHHHHHHHHHHC-CCCCCCCCCCCCEEEECCCCC-------C--C--CHHHHHHHHHHCCEEEECCCCCCCCCCCCC
Q ss_conf 998889999998616-852334588898126316655-------6--7--679999988856718803789989999888
Q gi|254780349|r 296 IVLNSQALAKKLQFL-GFDIVSGGTDNHLMLVDLRSK-------R--M--TGKRAESILGRVSITCNKNSIPFDPESPFI 363 (433)
Q Consensus 296 vv~NA~~La~~L~~~-G~~vv~ggTd~H~vlvdl~~~-------~--~--~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~ 363 (433)
.-+|...+.+.|.+. |+.+.. -.-+-.+|+|++.. + + +-.-+...|+++||.+. ||. .|-
T Consensus 300 y~~rrd~~~~~l~~~~g~~~~~-P~g~~y~~~d~~~~~~~~~p~~~~~~~~~~f~~~ll~~~gV~v~----PG~---~FG 371 (402)
T PRK06107 300 YKQRRDYALERLNAIPGLSCLV-PDGAFYLYVNCAGLIGKTTPEGKVLETDTDVVLYLLDSVGVAVV----QGT---AYG 371 (402)
T ss_pred HHHHHHHHHHHHHHCCCCEECC-CCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEE----CCC---CCC
T ss_conf 9999999999887579967627-98127981305100344586656656889999999985899997----785---338
Q ss_pred C-CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9-85122466673079998999999999999960
Q gi|254780349|r 364 T-SGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 364 ~-sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
. .-+||.-. -.++++++-.+-|.++|+
T Consensus 372 ~~~~~Ri~fa------~~~e~L~ea~~Rl~~al~ 399 (402)
T PRK06107 372 LSPYFRMSIA------TSLETLEAGCDRIERAVA 399 (402)
T ss_pred CCCEEEEEEC------CCHHHHHHHHHHHHHHHH
T ss_conf 9982999971------999999999999999999
No 121
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.62 E-value=1.6e-14 Score=121.54 Aligned_cols=275 Identities=16% Similarity=0.173 Sum_probs=175.4
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHH
Q ss_conf 81043010298999983051028865798887533600679999999999999871886301000016799999999831
Q gi|254780349|r 37 QLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALM 116 (433)
Q Consensus 37 ~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl 116 (433)
++.-|.+|..+.+.+.. ..+.++. +||-=.| .|+--.+.+| ++...|-|++++-+ .-||..|-.+++++++
T Consensus 27 PIy~sstf~f~~~~~~~-~~~~~~~-~~y~Y~R--~~nPT~~~le----~~la~LEgg~~a~~-~sSGmaAi~~~ll~~l 97 (386)
T PRK06767 27 PLFQTSTFTFETAQQGE-ASFAGVD-PSYIYSR--LGNPTVKLFE----ERMAVLEGGEEALA-FGSGMAAISATLIGFL 97 (386)
T ss_pred CEECCCCEECCCHHHHH-HHHCCCC-CCCEECC--CCCHHHHHHH----HHHHHHHCCCEEEE-ECCHHHHHHHHHHHCC
T ss_conf 81078886508889988-7526886-7950338--9886799999----99999849971688-5278999999997307
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CHHHHHHHHHHHCCCEEEEECCCCC--CCCCHH
Q ss_conf 54874881233448411147665433333220136658323565---9899999998604667897055243--536379
Q gi|254780349|r 117 HPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLL---DMHEIESLAIEYNPKLIIVGGTAYS--RVWDWE 191 (433)
Q Consensus 117 ~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~I---D~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~ 191 (433)
+|||+|+..+--.||-.. +.. .....|++.- ..+ |.+++++.++ .+.|+|++.....| +..|++
T Consensus 98 ~~Gd~vv~~~~~Yg~T~~------l~~--~~~~~~gI~~--~~~d~~~~~~~~~~i~-~~Tklv~~EspsNP~l~v~Di~ 166 (386)
T PRK06767 98 KAGDHIICSNGLYGCTYG------FLE--VLEEKFMITH--SFCDMETEADIENKIR-PNTKLIFVETPINPTMKLIDLK 166 (386)
T ss_pred CCCCEEEECCCCCCCHHH------HHH--HHHHHCCEEE--EEECCCCHHHHHHHCC-CCCEEEEEECCCCCCCCCCCHH
T ss_conf 999989983798223466------999--9888737589--9968988899997568-8825999977999876712799
Q ss_pred HHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHH-CHHHH
Q ss_conf 99988641797899186201244320001232200-2356740456522567---4489833620565016646-54322
Q gi|254780349|r 192 RFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAI-FPGLQ 266 (433)
Q Consensus 192 ~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~av-fPg~q 266 (433)
++.++|++.|+++++|.. .|...+++|+++ ||||..|+.|.+.|-- ||.+.++++++.+++...- .-|..
T Consensus 167 ~i~~~A~~~g~~~vvDNT-----~atP~~~~Pl~~GaDivihS~TKYi~GHsD~l~G~vv~~~~~~~~~~~~~~~~~G~~ 241 (386)
T PRK06767 167 QVIRVAKRNGLLVIVDNT-----FCSPYLQRPLELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGI 241 (386)
T ss_pred HHHHHHHHCCCEEEEECC-----CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCC
T ss_conf 999986006734997457-----642200154436797899714640047766031388616799999999999841787
Q ss_pred HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCC------------CCCCCCEEEECCCCCCC
Q ss_conf 344556668999999997356489999999988899999986168-52334------------58889812631665567
Q gi|254780349|r 267 GGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLG-FDIVS------------GGTDNHLMLVDLRSKRM 333 (433)
Q Consensus 267 g~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G-~~vv~------------ggTd~H~vlvdl~~~~~ 333 (433)
-+|+ .+-. .++- ++ -...-.+|..+||.++|+.|.++. +.-|. ++ .-++-++++.
T Consensus 242 ~sp~----~a~l-~~rG-l~-TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yP~~~la~k~~~~~--gg~~sf~l~~--- 309 (386)
T PRK06767 242 MAPF----DAWL-LLRG-LK-TLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRG--GGVISFSIKG--- 309 (386)
T ss_pred CCCH----HHHH-HHCC-CC-CHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHCC--CCEEEEEEEC---
T ss_conf 8934----7789-8626-78-78999999999999999999639983758796888998872138--9468999938---
Q ss_pred CHHHHHHHHHHCCEE
Q ss_conf 679999988856718
Q gi|254780349|r 334 TGKRAESILGRVSIT 348 (433)
Q Consensus 334 ~G~~a~~~Le~~gI~ 348 (433)
+-..+.+.+++..+.
T Consensus 310 ~~~~~~~f~~~l~l~ 324 (386)
T PRK06767 310 GKEETQAFINDLHFI 324 (386)
T ss_pred CHHHHHHHHHHCCCC
T ss_conf 899999999838875
No 122
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.62 E-value=1.1e-13 Score=115.82 Aligned_cols=258 Identities=18% Similarity=0.173 Sum_probs=156.2
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHH
Q ss_conf 81043010298999983051028865798887533600679999999999999871886301000016799999999831
Q gi|254780349|r 37 QLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALM 116 (433)
Q Consensus 37 ~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl 116 (433)
+...|..|.-+.+.+.. ..+. ...+||-=.| .|+--++.+| ++..+|-|++.+-+- -||+.|-.+++++++
T Consensus 35 PIy~sstf~f~~~~~~~-~~~~-~~~~g~~YsR--~gNPT~~~LE----~~la~LEg~~~a~~~-sSGmaAi~~~ll~ll 105 (436)
T PRK07812 35 PIYQTTSYTFDDTDHAA-ALFG-LAEPGNIYTR--IMNPTQDVVE----QRIAALEGGVAALFL-ASGQAAETFAILNLA 105 (436)
T ss_pred CEECCCCEECCCHHHHH-HHHC-CCCCCCEECC--CCCHHHHHHH----HHHHHHHCCCCEEEE-CCHHHHHHHHHHHHH
T ss_conf 82077744308889999-8745-6778964208--9886699999----999998299878996-479999999999961
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHH
Q ss_conf 54874881233448411147665433333220136658323--5659899999998604667897055243--5363799
Q gi|254780349|r 117 HPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED--GLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWER 192 (433)
Q Consensus 117 ~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~--~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~ 192 (433)
+|||+|+..+--.||-.. +-. ...-.|++.-.- ..-|.+++++.+ +.+.|||++.....| ...|+++
T Consensus 106 ~~Gdhiv~~~~~YggT~~------l~~--~~l~~~Gi~v~fv~d~~d~~~~~~~i-~~~Tklv~~EtpsNP~l~v~Di~~ 176 (436)
T PRK07812 106 GAGDHIVSSPRLYGGTYN------LFH--YTLPKLGIEVSFVEDPDDLDSWRAAV-RPNTKAFFAETISNPQIDILDIPG 176 (436)
T ss_pred CCCCEEEEECCCCCCHHH------HHH--HHHHHCCCCEEEECCCCCHHHHHHHC-CCCCEEEEEECCCCCCEECCCHHH
T ss_conf 889889994886687899------999--99765287416967998899999745-867439999648998605236699
Q ss_pred HHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHHCHHHHHH
Q ss_conf 9988641797899186201244320001232200-2356740456522567---44898336205650166465432234
Q gi|254780349|r 193 FRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAIFPGLQGG 268 (433)
Q Consensus 193 l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~avfPg~qg~ 268 (433)
+.+||++.|+.+++|.. .|...+++|+++ ||||..|+.|.+.|-- ||.|..+...-|.+ .-||.+...
T Consensus 177 ia~iA~~~g~~~vVDNT-----fatP~~~~Pl~~GaDivihS~TKyi~GHsDvlgG~vv~~~~~~w~~---~r~~~~~~~ 248 (436)
T PRK07812 177 VAEVAHEAGVPLIVDNT-----IATPYLIRPLEHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQ---GRFPGFTTP 248 (436)
T ss_pred HHHHHHHCCCEEEEECC-----CCCCCCCCCCCCCCCEEEEECCEECCCCCCCEEEEEEECCCCCCCC---CCCCCCCCC
T ss_conf 99999985992996268-----6462303764148988999645031589770436998457554000---236565778
Q ss_pred -HHHHHH-----HHHH----------HHHHHHHCH-----------HHHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCC
Q ss_conf -455666-----8999----------999997356-----------489999999988899999986168--52334588
Q gi|254780349|r 269 -PFMHSI-----AAKA----------VAFGEALSS-----------EFRDYAKQIVLNSQALAKKLQFLG--FDIVSGGT 319 (433)
Q Consensus 269 -~~~~~i-----aa~a----------val~Ea~~~-----------~f~~Ya~qvv~NA~~La~~L~~~G--~~vv~ggT 319 (433)
+-.|.+ ...+ ..+.-.+.| -...-+++-.+||.++|+.|.++. -+|..-|-
T Consensus 249 d~~~~~~~~~~l~~~~~~~~~r~~~~r~~G~~lsP~da~L~lRGL~TL~lRm~r~~~nA~~iA~~L~~hp~V~~V~yPgL 328 (436)
T PRK07812 249 DPSYHGVVFAELGPPAYALKARVQLLRDLGSAASPFNAFLIAQGLETLSLRIERHVANAQRVAEFLAARDDVLSVNYAGL 328 (436)
T ss_pred CHHHHCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC
T ss_conf 75761415764154889999999998641113580777898736683899999999999999999960999668989898
Q ss_pred C
Q ss_conf 8
Q gi|254780349|r 320 D 320 (433)
Q Consensus 320 d 320 (433)
.
T Consensus 329 ~ 329 (436)
T PRK07812 329 P 329 (436)
T ss_pred C
T ss_conf 8
No 123
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.62 E-value=5.5e-14 Score=117.90 Aligned_cols=247 Identities=15% Similarity=0.069 Sum_probs=162.3
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00679999999999999871886301000016799999999831548748812334484111476654333332201366
Q gi|254780349|r 73 GCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 73 G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
|+--.+.+| ++..+|-|++.|-+-+ ||..|-.++++++++|||+|+..+--.||-..--.. .+...+.++..+
T Consensus 62 ~NPT~~~lE----~~la~LEgg~~a~~~s-SGmaAi~~~ll~~l~~Gdhiv~~~~~YggT~~l~~~-~l~~~Gi~v~~v- 134 (392)
T PRK05967 62 GTPTTDALC----KAIDALEGSAGTILVP-SGLAAVTVPLLGFLSAGDHALIVDSVYYPTRHFADT-MLKRLGVEVEYY- 134 (392)
T ss_pred CCHHHHHHH----HHHHHHCCCCCEEEEC-CHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH-HHHHCCEEEEEE-
T ss_conf 887799999----9999980998779945-779999999999738998899448984458999999-876368699998-
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCE
Q ss_conf 583235659899999998604667897055243--53637999988641797899186201244320001232200-235
Q gi|254780349|r 153 VRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHI 229 (433)
Q Consensus 153 ~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADv 229 (433)
|+ -|.+.+++.+ +.+.|+|++.....| ...|++.+++||++.|+.+++|.. .++..+++|+++ |||
T Consensus 135 -d~----~~~~~~~~~i-~~~Tklv~~Etp~NP~l~v~Di~~ia~~A~~~g~~~vVDNT-----fatP~~~~Pl~~GADi 203 (392)
T PRK05967 135 -DP----EIGAGIEKLM-RPNTKVVFTESPGSNTFEIQDIPAIAEAAHRHGAIVMMDNT-----WATPLYFRPLDFGVDI 203 (392)
T ss_pred -CC----CCHHHHHHHC-CCCCEEEEEECCCCCCCEEECHHHHHHHHHHCCCEEEEECC-----CCCCCEECCCCCCCCE
T ss_conf -89----9999999744-87865999855899864553549999999876987996177-----5453421456556868
Q ss_pred EEECCCCCCCCCC---CEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6740456522567---4489833620565016646543223445566689999999973564899999999888999999
Q gi|254780349|r 230 VTTTTHKSLRGPR---GGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKK 306 (433)
Q Consensus 230 vt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~ 306 (433)
|..|+.|-+.|-- ||.|.+++ ++++++....- ..|+..-..-|-+.. .-++ -...-+++-.+||.++|+.
T Consensus 204 VvhS~TKyl~GHsDvl~G~v~~~~-~~~~~l~~~~~--~~G~~l~P~~a~l~l---rGl~-TL~lRm~r~~~nA~~lA~~ 276 (392)
T PRK05967 204 SIHAATKYPSGHSDILLGTVSANE-KCWPQLLEAHG--TLGLCAGPDDTYQIL---RGLR-TMGIRLEHHRKSALEIARW 276 (392)
T ss_pred EEEECCCCCCCCCCCCCCEECCCH-HHHHHHHHHHH--HHCCCCCHHHHHHHH---HCCC-HHHHHHHHHHHHHHHHHHH
T ss_conf 999666466688752043233777-88899999987--504667978889987---1776-0999999999989999999
Q ss_pred HHHCCC--CCCCCCCCCC---------------EEEECCCCCCCCHHH-HHHHHHHCCE
Q ss_conf 861685--2334588898---------------126316655676799-9998885671
Q gi|254780349|r 307 LQFLGF--DIVSGGTDNH---------------LMLVDLRSKRMTGKR-AESILGRVSI 347 (433)
Q Consensus 307 L~~~G~--~vv~ggTd~H---------------~vlvdl~~~~~~G~~-a~~~Le~~gI 347 (433)
|.++.- .|..-|-.+| ++-++++. ++.+ +.+.+++..+
T Consensus 277 L~~hp~V~~V~yPgL~shp~h~la~~~~~g~gg~~sf~l~~---g~~~~~~~f~~~l~l 332 (392)
T PRK05967 277 LEGRPMVARVLHPALPSHPGHEIWKRDFSGASGIFSFVLAA---GGHAQAHAFLDALEI 332 (392)
T ss_pred HHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEEC---CCHHHHHHHHHHCCC
T ss_conf 97199976897999889944999998566897389999926---839999999982871
No 124
>PRK03321 putative aminotransferase; Provisional
Probab=99.61 E-value=1.9e-12 Score=107.12 Aligned_cols=314 Identities=16% Similarity=0.175 Sum_probs=203.9
Q ss_pred HHCCCCCCCCCCC--CHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHH-H
Q ss_conf 8388810430102--989999830510288657988875336006799999999999998718863010000167999-9
Q gi|254780349|r 33 NDEIQLIASENIV--SRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMN-Q 109 (433)
Q Consensus 33 ~~~l~LiASEN~~--S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An-~ 109 (433)
.+.|.|=+.||.. ||.|++++...+.+ ..-||. .++.+--|.+| +-+|.+.-+|=..+|+..- .
T Consensus 22 ~~~i~ls~Nenp~gp~p~v~~ai~~~~~~--~~~YPd------~~~~~Lr~aiA-----~~~~v~~~~I~v~nGs~e~i~ 88 (352)
T PRK03321 22 PGAIKLSSNETPFGPLPSVRAAIAEATDG--LNRYPD------NGAVELRAALA-----EHLGVAPEHVAVGCGSVALCQ 88 (352)
T ss_pred CCCEECCCCCCCCCCCHHHHHHHHHHHHH--CCCCCC------CCHHHHHHHHH-----HHHCCCHHHEEECCCHHHHHH
T ss_conf 99378029699999889999999986530--677989------98699999999-----987878587998746999999
Q ss_pred HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CC
Q ss_conf 9999831548748812334484111476654333332201366583235659899999998604667897055243--53
Q gi|254780349|r 110 GVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RV 187 (433)
Q Consensus 110 av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~ 187 (433)
.++.++++|||+|+..+.....+-. .....| .+.+.++.+++ ...|+|++.+.+ ..++|+|++.....| ..
T Consensus 89 ~~~~~~~~~gd~Vl~p~P~f~~Y~~---~~~~~G--~~~~~v~l~~~-~~~dl~~l~~~i-~~~~~lv~l~nPnNPTG~~ 161 (352)
T PRK03321 89 QLVQATAGPGDEVVFAWRSFEAYPI---LVQVAG--ATPVQVPLTDD-HTHDLDAMAAAI-TDRTRLIFVCNPNNPTGTV 161 (352)
T ss_pred HHHHHHHCCCCEEEECCCCHHHHHH---HHHHCC--CEEEEEECCCC-CCCCHHHHHHHC-CCCCCEEEECCCCCCCCCC
T ss_conf 9999981797989988885326899---999809--87999866755-578837899865-8887589984999973013
Q ss_pred CCHHHHHHHHHHC--CCEEEECCCCHHHHHHHHCCCCCCCC----CC-EEEECCCCC--CCCCCCEEEEECCCCHHHHCC
Q ss_conf 6379999886417--97899186201244320001232200----23-567404565--225674489833620565016
Q gi|254780349|r 188 WDWERFRSIADSI--GAYLMADISHISGLVVGGQHPSPVPH----CH-IVTTTTHKS--LRGPRGGLIMTNHADLAKKIN 258 (433)
Q Consensus 188 ~d~~~l~eIa~~~--ga~l~~D~aH~~GLIa~g~~~~Pl~~----AD-vvt~sTHKt--l~GPrgGiI~~~~~e~~~~i~ 258 (433)
++-+++.++++.. +.++++|.+. ..++-.+..++.++. -+ ||..|.-|+ |+|=|=|.++.+. ++.+++.
T Consensus 162 ~~~~~l~~l~~~~~~~~~vvvDEaY-~~f~~~~~~~~~~~~~~~~~nlivlrSfSK~~glaGlRlGy~ia~~-~~i~~l~ 239 (352)
T PRK03321 162 VTPAALARFVAAVPADVLVVLDEAY-VEYIRDGDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP-EVITALR 239 (352)
T ss_pred CCCHHHHHHHHHCCCCCEEEEHHHH-HHHHHCCCCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEECCH-HHHHHHH
T ss_conf 6837589999755478479722408-9884277876278875204525540254413378988533202899-9999999
Q ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHH
Q ss_conf 64654322344556668999999997356489999999988899999986168523345888981263166556767999
Q gi|254780349|r 259 SAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRA 338 (433)
Q Consensus 259 ~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a 338 (433)
+..-|.-.+ .+.+.||.+ +| + -..++.+..+.+++.-..|.+.|.+.|+++.. ++..-+|+++. .+..++
T Consensus 240 ~~~~p~~v~--~~aq~aa~a-aL-~-~~~~~~~~~~~~~~~R~~l~~~L~~~g~~v~p--s~anFi~~~~~---~~~~~~ 309 (352)
T PRK03321 240 KVAVPFSVN--SLAQAAAIA-SL-E-AADELLERVDAVVAERDRVSAALRAAGWTVPP--SQANFVWLPLG---ERTADF 309 (352)
T ss_pred HHCCCCCCH--HHHHHHHHH-HH-C-CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC--CCCEEEEEECC---CCHHHH
T ss_conf 845898855--999999999-96-4-92999999999999999999999978585889--98749999518---999999
Q ss_pred HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 998885671880378998999988898512246667307999899999999999996
Q gi|254780349|r 339 ESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 339 ~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
.+.|.+.||.+- |+ ...|+||..- ..+|++.+-+-+.+.+
T Consensus 310 ~~~L~~~GIlVR----~~------~~~~~RIsvg-------t~een~~ll~Alk~~~ 349 (352)
T PRK03321 310 AAAAAEAGVVVR----PF------GGEGVRVTVG-------APEENDAFLRAARAWR 349 (352)
T ss_pred HHHHHHCCEEEE----EC------CCCEEEEEEC-------CHHHHHHHHHHHHHHH
T ss_conf 999981993998----66------9991899809-------9999999999999997
No 125
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.61 E-value=1.3e-12 Score=108.20 Aligned_cols=294 Identities=17% Similarity=0.204 Sum_probs=186.3
Q ss_pred HHHHHHHCCCCCEECCCHHHHHHH-HHHHHHH-HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 999998718863010000167999-9999983-15487488123344841114766543333322013665832356598
Q gi|254780349|r 85 IERAKKLFNVNFVNVQSHSGSQMN-QGVFLAL-MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDM 162 (433)
Q Consensus 85 ~~~a~~lF~a~~anvqp~SG~~An-~av~~AL-l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~ 162 (433)
+...++|.|.+.+|.+++-|..|- .++.+|. ....++|+..+-.|....+.-. --.....++++..+.|+ ++.+|.
T Consensus 118 Q~~l~eLtGmd~~nasl~dga~a~~ea~~ma~r~~~r~~vlv~~s~hP~~~~v~~-t~a~~~g~~vv~v~~~~-~g~~Dl 195 (449)
T PRK00451 118 QTMICELTGMDVANASMYDGATALAEAALMAVRITGRNKVLVSGAVHPEYREVLK-TYLKGQGIEVVEVPYPE-DGVTDL 195 (449)
T ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH-HHCCCCCCEEEEECCCC-CCCCCH
T ss_conf 9999998598746778774778999999999864268739977987842799998-63015784279845775-666688
Q ss_pred HHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEE-----EECCCC
Q ss_conf 9999999860466789705524353637999988641797899186201244320001232200-2356-----740456
Q gi|254780349|r 163 HEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIV-----TTTTHK 236 (433)
Q Consensus 163 d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvv-----t~sTHK 236 (433)
+++.+.+.+.---+++--.+.+....|++++.+++++.|+++++ .+- ++|=|.+..|=++ |||+ ....||
T Consensus 196 ~~L~~~~~~~~A~vmi~~Pnt~G~~edi~~i~~~vh~~g~l~~~-~~n---~~aLg~l~~PGe~GaDIvvg~~q~lg~p~ 271 (449)
T PRK00451 196 EALEAAVDDDTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIV-VVD---PVSLGLLKPPGEYGADIVVGEGQPLGIPL 271 (449)
T ss_pred HHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEE-EEC---HHHHHCCCCCCCCCCCEEEECCCCCCCCC
T ss_conf 99986417875899985588777531699999999865974999-716---78860767844345406862476667786
Q ss_pred CCCCCCCEEEEECCCCHHHHCCHHHC---------HH----HH------------HHH-HHHHHHH-HHHHHHHHHCHHH
Q ss_conf 52256744898336205650166465---------43----22------------344-5566689-9999999735648
Q gi|254780349|r 237 SLRGPRGGLIMTNHADLAKKINSAIF---------PG----LQ------------GGP-FMHSIAA-KAVAFGEALSSEF 289 (433)
Q Consensus 237 tl~GPrgGiI~~~~~e~~~~i~~avf---------Pg----~q------------g~~-~~~~iaa-~aval~Ea~~~~f 289 (433)
+|.||.+|++-+++ ++..++-.-+. ++ +| ||. ....+.+ .|.+..-.+-+++
T Consensus 272 ~fGGP~~G~~a~~~-~l~r~lPgriVG~t~D~~G~~~y~LtLqtREQhIrReKAtSnIctnq~l~a~~a~~Yi~~lG~~G 350 (449)
T PRK00451 272 SFGGPYLGFFATRK-KLVRQMPGRLVGETVDVDGKRGFVLTLQAREQHIRREKATSNICTNQALCALAATIYMSLLGKEG 350 (449)
T ss_pred CCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHH
T ss_conf 67899878705565-00102898766721367886120113455322234555546666422788999999999759766
Q ss_pred -HHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf -999999998889999998616-852334588898126316655676799999888567188037899899998889851
Q gi|254780349|r 290 -RDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGI 367 (433)
Q Consensus 290 -~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGi 367 (433)
++-+++++.||+.|++.|.+. |+++...+.--|-+++++.. +-.++.++|...||..-.+.-.+. |..+..+
T Consensus 351 Lk~va~~a~~nAnyl~~~L~~~~~~~~~~~~~~f~Efv~~~~~---~a~~i~k~L~~~gi~~g~~lt~~~---p~~~~~l 424 (449)
T PRK00451 351 LREVAEQNHQKAHYLAERLAEIGGVEVLFNGPFFNEFVVRLPK---PAEEVNEALLEKGILGGYDLGRYY---PELGNSL 424 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEEECCC---CHHHHHHHHHHCCCCCCCCCCCCC---CCCCCEE
T ss_conf 9999999999999999998737983416899802589997898---899999999976997898854427---7889979
Q ss_pred CCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 2246667307999899999999999996
Q gi|254780349|r 368 RLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 368 RlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
=+-..|. -..+|++++++.+.+++
T Consensus 425 mi~~TEt----~sk~dlD~~v~al~eil 448 (449)
T PRK00451 425 LVAVTEL----RTKEDIDALVEALGEVL 448 (449)
T ss_pred EEECCCC----CCHHHHHHHHHHHHHHH
T ss_conf 9970789----99999999999999986
No 126
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.60 E-value=3.4e-12 Score=105.40 Aligned_cols=334 Identities=17% Similarity=0.196 Sum_probs=214.4
Q ss_pred HHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC--EE-CCCHHHHH-
Q ss_conf 83888104301--02989999830510288657988875336006799999999999998718863--01-00001679-
Q gi|254780349|r 33 NDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNF--VN-VQSHSGSQ- 106 (433)
Q Consensus 33 ~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~--an-vqp~SG~~- 106 (433)
++.|+|--.|. -+.+.+.++..-.+.+-- ..|| -.+-+.++-+...+.-.+-||.+. .+ |-..+|+.
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~------~~Y~-~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~ 100 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGG------THYT-PSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKE 100 (393)
T ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHCCC------CCCC-CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHH
T ss_conf 8679756889999986999999999986567------7778-87677999999999988753998897662898266799
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 9999999831548748812334484111476654333332201366583--23565989999999860466789705524
Q gi|254780349|r 107 MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRK--EDGLLDMHEIESLAIEYNPKLIIVGGTAY 184 (433)
Q Consensus 107 An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~--~~~~ID~d~~~~~a~~~kPklIi~G~S~y 184 (433)
|...++.+++.|||.|+..+...-.+. .. +....-..++++.+. ++..+|.|++++.+.. |.|+|++-....
T Consensus 101 al~~a~~al~~pGDeVlip~P~Y~~y~---~~--~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~ln~PnN 174 (393)
T COG0436 101 ALFLAFLALLNPGDEVLIPDPGYPSYE---AA--VKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP-KTKAIILNSPNN 174 (393)
T ss_pred HHHHHHHHHCCCCCEEEECCCCCCCHH---HH--HHHCCCEEEEECCCCCCCCCCCCHHHHHHHCCC-CCEEEEEECCCC
T ss_conf 999999997189988998389982559---99--987799798721666655874799999864774-645999979999
Q ss_pred CC-----CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHH-CCCCCCCCCC-----EEEECCCCCCC--CCCCEEEEECCC
Q ss_conf 35-----36379999886417978991862012443200-0123220023-----56740456522--567448983362
Q gi|254780349|r 185 SR-----VWDWERFRSIADSIGAYLMADISHISGLVVGG-QHPSPVPHCH-----IVTTTTHKSLR--GPRGGLIMTNHA 251 (433)
Q Consensus 185 ~~-----~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g-~~~~Pl~~AD-----vvt~sTHKtl~--GPrgGiI~~~~~ 251 (433)
|- +-.++++.++|++++.+++.|.. +.+|+-.| .+++++...+ |+..|.-|++. |=|-|.+.++++
T Consensus 175 PTGav~~~~~l~~i~~~a~~~~i~ii~DE~-Y~~l~yd~~~~~s~~~~~~~~~~~I~i~s~SK~~~mtG~RiG~~v~~~~ 253 (393)
T COG0436 175 PTGAVYSKEELKAIVELAREHDIIIISDEI-YEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPE 253 (393)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCEEEEEECC-CCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEECHH
T ss_conf 667788999999999999987929999636-4436268987777544278764189994563357883612189972769
Q ss_pred CHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCEEEECCC
Q ss_conf 0565016646543223445566689999999973-56489999999988899999986168-523345888981263166
Q gi|254780349|r 252 DLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEAL-SSEFRDYAKQIVLNSQALAKKLQFLG-FDIVSGGTDNHLMLVDLR 329 (433)
Q Consensus 252 e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~-~~~f~~Ya~qvv~NA~~La~~L~~~G-~~vv~ggTd~H~vlvdl~ 329 (433)
++.+.+.+-.--..-+.+-+.+.|+.+ +|..-. ....+...+...+|.+.|.+.|.+.+ +.+...---.-.+|+++.
T Consensus 254 ~l~~~~~~l~~~~~~~~~~~~Q~aa~~-aL~~~~~~~~~~~~~~~~~~rr~~l~~~l~~~~g~~~~~~p~Ga~y~~~~i~ 332 (393)
T COG0436 254 ELIAALRKLKSYLTSCAPTPAQYAAIA-ALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIP 332 (393)
T ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHH-HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECC
T ss_conf 999999999987236877899999999-9567663058999999999999999999975588665138886459976579
Q ss_pred CCCCCH-HHHHHHHHHCCEEEECCCCCCCCCCCCCC----CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 556767-99999888567188037899899998889----8512246667307999899999999999996
Q gi|254780349|r 330 SKRMTG-KRAESILGRVSITCNKNSIPFDPESPFIT----SGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 330 ~~~~~G-~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~----sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
.. .+. .-+.+.|++.||.|. ||. .|-. .-+|++-. -.+++.++..+.+.+.+
T Consensus 333 ~~-~d~~~f~~~Ll~~~gV~v~----PG~---~Fg~~~g~~~vRis~~------~~~~~l~~a~~rl~~~~ 389 (393)
T COG0436 333 EL-LDSEEFAKKLLEEAGVAVV----PGS---GFGEPPGEGYVRLSLA------TSEETLEEALRRLARFL 389 (393)
T ss_pred CC-CCHHHHHHHHHHHCCEEEE----CHH---HHCCCCCCCEEEEEEE------CCHHHHHHHHHHHHHHH
T ss_conf 98-9989999999986799995----725---7497877987999973------68999999999999998
No 127
>PRK06507 consensus
Probab=99.60 E-value=3.9e-12 Score=104.97 Aligned_cols=355 Identities=13% Similarity=0.085 Sum_probs=203.3
Q ss_pred HHHHHHHHCHHHHHHHHHHHH---H-HHHCCCCCCCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 764697858999999999999---9-9838881043010--298999983051028865798887533600679999999
Q gi|254780349|r 10 FQQSLIESDPDVFSLIGQESC---R-QNDEIQLIASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENI 83 (433)
Q Consensus 10 ~~~~l~~~Dpei~~~i~~e~~---r-q~~~l~LiASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~l 83 (433)
+.+.++...|.....+.+..+ + .++.|+|-..|-- +++.+.++....+.+-.. | |+-..-+.++-+-
T Consensus 4 ~~~r~~~~~~s~~~~i~~~a~~l~~~G~~vi~L~iG~pd~~~p~~i~~a~~~~~~~~~~-~------Y~~~~G~~~LRea 76 (400)
T PRK06507 4 IADRLKNVDISASAAMTQRARELRAEGIKVVSLSSGEPDFPTPAHAIEAAHAAALAGDT-K------YPPMDGTPALKAA 76 (400)
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCC-C------CCCCCCHHHHHHH
T ss_conf 88998618968899999999999977997377789388998889999999999745899-8------7998784999999
Q ss_pred HHHHHHHHCCCC--CEECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CC
Q ss_conf 999999871886--30100001679-999999983154874881233448411147665433333220136658323-56
Q gi|254780349|r 84 AIERAKKLFNVN--FVNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-GL 159 (433)
Q Consensus 84 a~~~a~~lF~a~--~anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~~ 159 (433)
..+..++-+|.+ .-||-..+|++ |...++.+++.|||.|+..+....++. ..+...| -+.++++++.++ ..
T Consensus 77 ia~~~~~~~g~~~~p~~I~vt~G~~~al~~~~~~l~~pGD~Vli~~P~y~~y~---~~~~~~g--~~~v~v~l~~~~g~~ 151 (400)
T PRK06507 77 IQRKFKRENNLDYDPSEIVVSNGGKQVIFNAMMATCNPGDEVVIPAPSWVSYA---DIVKLAG--GVPVAVPCREETGFK 151 (400)
T ss_pred HHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHH---HHHHHCC--CEEEEEECCCCCCCC
T ss_conf 99999998489998243898178299999999996699998999058774057---9999819--915997567011764
Q ss_pred CCHHHHHHHHHHHCCCEEEEECCCCC--C---CCCHHHHHHHHHHC-CCEEEECCCCHHHHHHHH-CCCCCCCCC----C
Q ss_conf 59899999998604667897055243--5---36379999886417-978991862012443200-012322002----3
Q gi|254780349|r 160 LDMHEIESLAIEYNPKLIIVGGTAYS--R---VWDWERFRSIADSI-GAYLMADISHISGLVVGG-QHPSPVPHC----H 228 (433)
Q Consensus 160 ID~d~~~~~a~~~kPklIi~G~S~y~--~---~~d~~~l~eIa~~~-ga~l~~D~aH~~GLIa~g-~~~~Pl~~A----D 228 (433)
+|.+++++.+ ..|+|+|++-....| + .-+++++.++|.+. +.+++.|..| ..|+-.| .|.+....+ |
T Consensus 152 ~d~~~le~~~-~~~tk~iil~~P~NPTG~v~s~~~l~~i~~~a~~~~~v~visDEiY-~~l~~~~~~~~s~~~~~p~~~~ 229 (400)
T PRK06507 152 LRPEDLEAAI-TPRTKWLFLNFPNNPTGAACTRAEMAAIAEVMLRHPHVWIMTDDIY-EHLVYDGFEFCTIAEVEPRLYD 229 (400)
T ss_pred CCHHHHHHHC-CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCH-HHHEECCCCCCCHHHHCCCCCC
T ss_conf 1699999746-7566499974992931288647799999986653168214056642-4412089778878885856455
Q ss_pred --EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHH
Q ss_conf --5674045652--256744898336205650166465432234455666899999999735648-99999999888999
Q gi|254780349|r 229 --IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEF-RDYAKQIVLNSQAL 303 (433)
Q Consensus 229 --vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f-~~Ya~qvv~NA~~L 303 (433)
|+.+|.-|+| +|=|=|.+...+ ++.+++.+.-.-...+-+.+.+.|+. .+|.. . ++| ++..+..-++...|
T Consensus 230 ~~i~~~S~SK~~~~~G~RiG~~~~~~-~~i~~~~~~~~~~~~~~~~~~Q~aa~-~al~~-~-~~~~~~~~~~~~~rrd~l 305 (400)
T PRK06507 230 RVLTMNGVSKAYAMTGWRLGFCGGPK-ELIKAMSNVNGQATGGIATLAQAAAA-AALDG-P-QDLLKERAAIYRERRDFV 305 (400)
T ss_pred CEEEEECCCCCCCCCCCCEEEEECCH-HHHHHHHHHHHHCCCCCCHHHHHHHH-HHHHC-C-HHHHHHHHHHHHHHHHHH
T ss_conf 35898335444467651048774879-99999999986524765439999999-99849-7-777789999999999999
Q ss_pred HHHHHHC-CCCCCCCCCCCCEEEECCCCC-----------CCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCC-CCCCCC
Q ss_conf 9998616-852334588898126316655-----------676799999888567188037899899998889-851224
Q gi|254780349|r 304 AKKLQFL-GFDIVSGGTDNHLMLVDLRSK-----------RMTGKRAESILGRVSITCNKNSIPFDPESPFIT-SGIRLG 370 (433)
Q Consensus 304 a~~L~~~-G~~vv~ggTd~H~vlvdl~~~-----------~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~-sGiRlG 370 (433)
.+.|.+. |+.+.. -.-+-.+|+|+... ..+-.-+...|++.|+.+. ||. .|-. .-+||.
T Consensus 306 ~~~L~~~~g~~~~~-P~G~fy~~~~~~~~~~~~~~~~~~~~~d~~f~~~Ll~e~gV~v~----PG~---~FG~~~~vRis 377 (400)
T PRK06507 306 VEKLAEIPGLTCHK-PEGAFYIYPNIAGLIGKTSKGGRRLETDEDFVMALLEEQHVATV----QGA---AYGMSPYFRLS 377 (400)
T ss_pred HHHHHHCCCCCCCC-CCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEE----CCC---CCCCCCEEEEE
T ss_conf 99998478995678-98147997754010233453456678889999999985899997----787---44899839999
Q ss_pred CHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 6667307999899999999999
Q gi|254780349|r 371 TPSGTTRGFKEKDFEYIGELIA 392 (433)
Q Consensus 371 T~aiTtrG~~e~em~~iA~li~ 392 (433)
-. +.+-.-++-++.|++++.
T Consensus 378 ~a--~~~~~l~eal~Rl~~f~~ 397 (400)
T PRK06507 378 YA--TDMESLGEGCARIAQFCE 397 (400)
T ss_pred EC--CCHHHHHHHHHHHHHHHH
T ss_conf 64--999999999999999999
No 128
>PRK06056 consensus
Probab=99.60 E-value=1.3e-11 Score=101.39 Aligned_cols=351 Identities=15% Similarity=0.154 Sum_probs=198.8
Q ss_pred HHHHHHHHCHH-HHHHHHHHHHHH---HHCCCCCCCCC-C-CCHHHHHHHHCCC----CCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 76469785899-999999999999---83888104301-0-2989999830510----2886579888753360067999
Q gi|254780349|r 10 FQQSLIESDPD-VFSLIGQESCRQ---NDEIQLIASEN-I-VSRAVLEAQGSIL----TNKYAEGYPSKRYYGGCQYVDD 79 (433)
Q Consensus 10 ~~~~l~~~Dpe-i~~~i~~e~~rq---~~~l~LiASEN-~-~S~~v~~~l~S~l----~nkyaeG~pg~ryy~G~~~~d~ 79 (433)
+.+.+....|. +.++.++-.+.+ ++-|+|--.+- + +++.+++++.-.+ +++|+ -.+-..+
T Consensus 7 ~s~r~~~~~~s~~~~i~~~a~~l~~~G~~vi~l~~G~Pd~~~p~~~~~a~~~a~~~~~~~~Y~----------~~~G~~e 76 (402)
T PRK06056 7 ISARIGGIAESATLAVDAKAKALKAAGRPVIGFGAGEPDFPTPDHIVEAAVAACRDPKNHRYT----------PAAGLPE 76 (402)
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC----------CCCCHHH
T ss_conf 999986499379999999999999779982788896999998899999999997599888579----------9868199
Q ss_pred HHHHHHHHHHHHCCCC--CEECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999999871886--30100001679-99999998315487488123344841114766543333322013665832
Q gi|254780349|r 80 IENIAIERAKKLFNVN--FVNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKE 156 (433)
Q Consensus 80 iE~la~~~a~~lF~a~--~anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~ 156 (433)
+-+-..++.++-+|.+ .-||-..+|++ |...++.+|++|||.|+..+...-++.. .... ..-..++++.+++
T Consensus 77 LR~aia~~~~~~~g~~~~~d~I~iT~G~~~al~~~~~~l~~pGD~Vlv~~P~y~~y~~---~~~~--~g~~~v~v~~~~~ 151 (402)
T PRK06056 77 LREAIAAKTLRDSGYEVSPSQVLVTNGGKQAVYEAFATLLDPGDEVILPAPYWTTYPE---AIRL--AGGVPVEVVAGAD 151 (402)
T ss_pred HHHHHHHHHHHHHCCCCCHHHEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHH---HHHH--CCCCEEEECCCCC
T ss_conf 9999999999983899880237980681499999999857999989981798756199---9997--2897078223733
Q ss_pred C-CCCCHHHHHHHHHHHCCCEEEEECCCCC--CC---CCHHHHHHHHHHCCCEEEECCCCHHHHHHHH-CCCCC---CCC
Q ss_conf 3-5659899999998604667897055243--53---6379999886417978991862012443200-01232---200
Q gi|254780349|r 157 D-GLLDMHEIESLAIEYNPKLIIVGGTAYS--RV---WDWERFRSIADSIGAYLMADISHISGLVVGG-QHPSP---VPH 226 (433)
Q Consensus 157 ~-~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~---~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g-~~~~P---l~~ 226 (433)
+ ..+|+|++++.. ..++|+|++-....| +. -.++++.++|.+.+.+++.|..+- .|+-.+ .+++. +++
T Consensus 152 ~~~~~d~~~le~~~-~~~tk~iil~~P~NPtG~v~s~e~l~~l~~la~~~~i~ii~DEiY~-~l~~~~~~~~s~~~~~p~ 229 (402)
T PRK06056 152 QGYLVTVEQLEAAR-TERTKVLLFVSPSNPTGAVYSPEQVRAIGRWAAEHGIWVISDEIYE-HLVYDGAVFTSIPAAVPE 229 (402)
T ss_pred CCCCCCHHHHHHHC-CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCHHHH-HCCCCCCCCCCHHHHHHH
T ss_conf 37787999999636-6687399984897988887427889999999997146155104432-113589888888886545
Q ss_pred -CC--EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHH
Q ss_conf -23--5674045652--256744898336205650166465432234455666899999999735648-99999999888
Q gi|254780349|r 227 -CH--IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEF-RDYAKQIVLNS 300 (433)
Q Consensus 227 -AD--vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f-~~Ya~qvv~NA 300 (433)
.| |+.+|.-|+| +|=|-|.++..+ ++.+++.+..--...+.+.+.+.++.+ ++.. ..++ .+..+..-++.
T Consensus 230 ~~~~~i~~~S~SK~~~~~G~R~G~~v~~~-~~i~~~~~~~~~~~~~~~~~~q~~a~~-al~~--~~~~~~~~~~~~~~rr 305 (402)
T PRK06056 230 LADRCIVVNGVAKTYAMTGWRVGWMIGPA-DVIKAATNLQSHATSNVSNVSQRAALA-AVSG--PLDAVAEMREAFDRRR 305 (402)
T ss_pred HHCCCEEEECCCCCCCCCCCEEEEEEECH-HHHHHHHHHHHHCCCCCCHHHHHHHHH-HHHC--CHHHHHHHHHHHHHHH
T ss_conf 41464475201133557653079997089-999999999865457742299999999-9858--8999999987899999
Q ss_pred HHHHHHHHHC-CCCCCC-CCCCCCEEEECCCCC---------CCCHHH-HHHHHHHCCEEEECCCCCCCCCCCCC-CCCC
Q ss_conf 9999998616-852334-588898126316655---------676799-99988856718803789989999888-9851
Q gi|254780349|r 301 QALAKKLQFL-GFDIVS-GGTDNHLMLVDLRSK---------RMTGKR-AESILGRVSITCNKNSIPFDPESPFI-TSGI 367 (433)
Q Consensus 301 ~~La~~L~~~-G~~vv~-ggTd~H~vlvdl~~~---------~~~G~~-a~~~Le~~gI~~Nkn~iP~D~~~~~~-~sGi 367 (433)
+.|.+.|.+. |+.+.. .| .-.+|+|++.. ..+..+ +...|+++|+.+. ||.. |- +.-+
T Consensus 306 ~~~~~~L~~~~~~~~~~P~G--~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~e~gV~v~----PG~~---Fg~~g~~ 376 (402)
T PRK06056 306 RTIVRMLNAIPGVSCPTPDG--AFYAYPDVKALLGREIRGRRPQTSAELAALILEEAEVAVV----PGEA---FGTPGYL 376 (402)
T ss_pred HHHHHHHHHCCCCEECCCCE--EEEEEEECHHHCCCCCCCCCCCCHHHHHHHHHHHCCEEEE----CCCC---CCCCCEE
T ss_conf 99999998679927358884--4699775545336322589989999999999970989997----4844---4899839
Q ss_pred CCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 22466673079998999999999999960
Q gi|254780349|r 368 RLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 368 RlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
||.-. ..++++++-.+-|.++|.
T Consensus 377 Risfa------~~~e~l~eal~RL~~~l~ 399 (402)
T PRK06056 377 RLSYA------LGDDDLVEGVRRLQELLS 399 (402)
T ss_pred EEEEE------CCHHHHHHHHHHHHHHHH
T ss_conf 99970------899999999999999999
No 129
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.60 E-value=7.4e-13 Score=110.02 Aligned_cols=291 Identities=16% Similarity=0.224 Sum_probs=195.7
Q ss_pred HHHHHHHCCCCCEECCCHHHHHHHHHHHHHH----HC----CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999987188630100001679999999983----15----487488123344841114766543333322013665832
Q gi|254780349|r 85 IERAKKLFNVNFVNVQSHSGSQMNQGVFLAL----MH----PGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKE 156 (433)
Q Consensus 85 ~~~a~~lF~a~~anvqp~SG~~An~av~~AL----l~----pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~ 156 (433)
.+..+++-|-+.++.||.+|+++-++-++.. -. .-++|+..+-.||- .+.+....+|+++..+.|+
T Consensus 121 q~~L~eITGmd~vSlqP~aGAqGE~aGll~Irayh~~~G~~~R~~vLiP~SAHGT-----NPAsA~maG~~Vv~v~~~~- 194 (490)
T PRK04366 121 QEWLKEITGMDAVTLQPAAGAHGELTGLLIIRAYHEARGDTKRTEVIVPDSAHGT-----NPASAAMAGFKVVEIPSNE- 194 (490)
T ss_pred HHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC-----CHHHHHHCCCEEEEECCCC-
T ss_conf 9999998599858406898559999999999999997598577679985556789-----8788875594468825798-
Q ss_pred CCCCCHHHHHHHHHHHCCCEEEEECCCCC-CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECC
Q ss_conf 35659899999998604667897055243-53637999988641797899186201244320001232200-23567404
Q gi|254780349|r 157 DGLLDMHEIESLAIEYNPKLIIVGGTAYS-RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTT 234 (433)
Q Consensus 157 ~~~ID~d~~~~~a~~~kPklIi~G~S~y~-~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sT 234 (433)
+|.+|++++++.+...---+.|--.|.+. |.-++++|.+|+++.|+++.+|.|..-+++ |.. .|=+. +||+-...
T Consensus 195 ~G~vDle~Lka~~~~~~A~lMiTnPnt~GvfE~~i~ei~~ivH~~Ggl~Y~DGANlNAi~--G~~-rPgd~G~Dv~HlNL 271 (490)
T PRK04366 195 DGLVDLEALKAAVGEDTAALMLTNPNTLGLFERNIKEIAEIVHEAGGLLYYDGANLNAIL--GKV-RPGDMGFDVVHLNL 271 (490)
T ss_pred CCCCCHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCC--CCC-CHHHCCCCEEEEEC
T ss_conf 998199999998753103135515765360224899999999971998986575620001--314-77665874575313
Q ss_pred CCCCCCCCC------EEEEECCCCHHHHC------------------CHHHCHHHHHHH-HHHHHHHHHHHHHHHHCHHH
Q ss_conf 565225674------48983362056501------------------664654322344-55666899999999735648
Q gi|254780349|r 235 HKSLRGPRG------GLIMTNHADLAKKI------------------NSAIFPGLQGGP-FMHSIAAKAVAFGEALSSEF 289 (433)
Q Consensus 235 HKtl~GPrg------GiI~~~~~e~~~~i------------------~~avfPg~qg~~-~~~~iaa~aval~Ea~~~~f 289 (433)
||||.-|+| |-|.+++ ++..-+ .++| |-.+.+ =...|.-.|.+..-++-+++
T Consensus 272 HKTFstPHGGGGPG~Gpv~v~~-~L~pfLP~P~v~~~~~~y~l~~~~~~si--G~v~~f~Gn~~vl~ra~~Yi~~lG~~G 348 (490)
T PRK04366 272 HKTFSTPHGGGGPGSGPVGVKK-ELAPFLPVPVVEKDGGRYRLDYDRPKSI--GRVRAFYGNFGVLVRAYAYIRSLGAEG 348 (490)
T ss_pred CCCCCCCCCCCCCCCCCEEHHH-HHHCCCCCCCEECCCCCCCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 4234457888888877532554-4120088870213688311267887663--211202475188999999999866747
Q ss_pred -HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC----CCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCC
Q ss_conf -99999999888999999861685233458889812631665----5676799999888567188037899899998889
Q gi|254780349|r 290 -RDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRS----KRMTGKRAESILGRVSITCNKNSIPFDPESPFIT 364 (433)
Q Consensus 290 -~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~----~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~ 364 (433)
++-++.-|-||+.|.+.|.+. |++..++.--|.+++|.+. .|++..+++++|-..|+--- ++-| |-.++
T Consensus 349 L~~~s~~AvLNANYl~~~L~~~-~~~~y~~~~~HEfv~~~~~~~k~~gv~~~DiaKrLlDyG~H~p--T~~f---PliV~ 422 (490)
T PRK04366 349 LREVSEDAVLNANYLMARLKDV-YDLPYPRRCMHEFVLSGKRLKKETGVRALDIAKRLLDYGFHPP--TIYF---PLIVP 422 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCEEEEEEECCHHHHHHCCCCHHHHHHHHHCCCCCCC--CCCC---CCCCC
T ss_conf 8999999999999999985355-7578899767899964377544239989999999857799976--1016---66578
Q ss_pred CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 851224666730799989999999999999602
Q gi|254780349|r 365 SGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 365 sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
..+=|-- |---..+++++.++.+..+.+.
T Consensus 423 e~lmiEP----TEsEske~LD~f~~am~~I~~e 451 (490)
T PRK04366 423 EALMIEP----TETESKETLDAFIDAMKEIAEE 451 (490)
T ss_pred CCEEECC----CCCCCHHHHHHHHHHHHHHHHH
T ss_conf 7315367----5777999999999999999999
No 130
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.60 E-value=2.9e-13 Score=112.88 Aligned_cols=250 Identities=19% Similarity=0.220 Sum_probs=152.6
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHH
Q ss_conf 81043010298999983051028865798887533600679999999999999871886301000016799999999831
Q gi|254780349|r 37 QLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALM 116 (433)
Q Consensus 37 ~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl 116 (433)
+...|..|.-+.+.++. ..+..+ .+||-=.| .|+--.+.+| ++..+|=|+++|-+- -||..|-.+++++++
T Consensus 27 PIy~sstf~f~~~~~~~-~~~~~~-~~g~~YsR--~gNPT~~~lE----~~la~LEgg~~a~~~-sSGmaAi~~~ll~ll 97 (432)
T PRK06702 27 PLYQSTTYKYDTSDDLA-ALFNLE-AEGYIYTR--IGNPTLAAFE----QKLAELEGGVGAVAT-ASGQAAIMLAVLNIC 97 (432)
T ss_pred CCCCCCCEECCCHHHHH-HHHCCC-CCCCEECC--CCCHHHHHHH----HHHHHHHCCCCEEEE-CHHHHHHHHHHHHHC
T ss_conf 61146525709989999-873677-68960318--9986799999----999998399828985-328999999999962
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHH
Q ss_conf 548748812334484111476654333332201366583235659899999998604667897055243--536379999
Q gi|254780349|r 117 HPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFR 194 (433)
Q Consensus 117 ~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~ 194 (433)
+|||+|+..+--.||-..--. ..+...+.++..+ |+ ..|.+++++. ...++|+|++..-..| ...|++++.
T Consensus 98 ~~Gd~iv~~~~~YGgT~~l~~-~~l~~~GI~v~~v--d~---~~~~~~~~~~-~~~~Tkli~~EtpsNP~l~v~Di~~ia 170 (432)
T PRK06702 98 SSGDHLLCSSTVYGGTFNLFG-VSLRKLGIDVTFF--NP---NLTADEIVAL-ANDKTKLVYAESLGNPAMNVLNFKEFS 170 (432)
T ss_pred CCCCEEEECCCCCHHHHHHHH-HHEECCCEEEEEE--CC---CCCHHHHHHH-CCCCCEEEEEEECCCCCCEEECHHHHH
T ss_conf 899989984887121799986-4020288799987--89---9999999974-578750899972799973202799999
Q ss_pred HHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCCCCCCCCC---CEEEEEC-CCCHHHHCCHHHCHHHHH--
Q ss_conf 88641797899186201244320001232200-2356740456522567---4489833-620565016646543223--
Q gi|254780349|r 195 SIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTHKSLRGPR---GGLIMTN-HADLAKKINSAIFPGLQG-- 267 (433)
Q Consensus 195 eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKtl~GPr---gGiI~~~-~~e~~~~i~~avfPg~qg-- 267 (433)
+||++.|+.+++|..- |++.+++|+++ ||||..|+.|-+.|-- ||.|+.. +.++. ++-||-+..
T Consensus 171 ~iA~~~gi~~vVDNTf-----atP~~~rPl~~GaDiVvhS~TKyi~GHsD~lgG~vv~~g~~~w~----~~~~p~l~~p~ 241 (432)
T PRK06702 171 DAAKELEVPFIVDNTL-----ATPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWT----NGKYPELVEPD 241 (432)
T ss_pred HHHHHCCCEEEEECCC-----CCCCCCCCHHCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCHH----CCCCHHHCCCC
T ss_conf 9997669818963576-----43010462012898999853421568875033599715754110----14278760883
Q ss_pred -HHH----HHHHHHHHH----------HHHHHHCH-----------HHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf -445----566689999----------99997356-----------489999999988899999986168
Q gi|254780349|r 268 -GPF----MHSIAAKAV----------AFGEALSS-----------EFRDYAKQIVLNSQALAKKLQFLG 311 (433)
Q Consensus 268 -~~~----~~~iaa~av----------al~Ea~~~-----------~f~~Ya~qvv~NA~~La~~L~~~G 311 (433)
.+| .....+.+. .+.-.+.| -...-.+|-.+||.++|+.|.+.-
T Consensus 242 ~~~~~~~~~~~~g~~~~~~~~r~~~~r~~G~~lsP~~a~L~lrGL~TL~lRm~r~~~nA~~vA~~L~~hp 311 (432)
T PRK06702 242 PSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLETLHLRMERHSENALAVAKWLADHE 311 (432)
T ss_pred HHHCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 5540207887413778999999999885266678225689872789799999999999999999986299
No 131
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.60 E-value=1.3e-13 Score=115.35 Aligned_cols=263 Identities=21% Similarity=0.169 Sum_probs=158.1
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHH
Q ss_conf 88104301029899998305102886579888753360067999999999999987188630100001679999999983
Q gi|254780349|r 36 IQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLAL 115 (433)
Q Consensus 36 l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~AL 115 (433)
-+...|..|.-+....+. ..+ ....+||-=.|+ |+--.+.+| ++..+|-|++++-+- -||..|-.++++++
T Consensus 29 ~PI~~sstf~f~~~~~~~-~~~-~~~~~g~~YsR~--gnPT~~~lE----~~la~LEg~~~a~~~-sSGmaAis~~ll~l 99 (431)
T PRK08248 29 VPIYQTSSYVFRDSEHAA-NLF-GLQEPGNIYTRI--MNPTNDVFE----KRIAALEGGVGALAV-SSGQAAVTYSILNI 99 (431)
T ss_pred CCCCCCCCEECCCHHHHH-HHH-CCCCCCCEEECC--CCHHHHHHH----HHHHHHHCCCCEEEE-CCHHHHHHHHHHHH
T ss_conf 881278764018879999-762-567689633189--886799999----999998399848995-46999999999997
Q ss_pred HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHH
Q ss_conf 1548748812334484111476654333332201366583235659899999998604667897055243--53637999
Q gi|254780349|r 116 MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERF 193 (433)
Q Consensus 116 l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l 193 (433)
++|||+|+..+--.||-..--.. .+.-.+.++..+ |. -|.+++++.+ ..++|+|++.....| ...|++.+
T Consensus 100 l~~Gdhiv~~~~~YggT~~l~~~-~l~~~Gi~v~~v--D~----~d~~~~~~~i-~~~Tkli~~EsPsNP~l~v~Di~~i 171 (431)
T PRK08248 100 ASAGDEIVSSSSLYGGTYNLFAH-TLPKLGITVKFV--DP----SDPENFEAAI-TDKTKALFAETIGNPKGDVLDIEAV 171 (431)
T ss_pred HCCCCEEEECCCCCCCHHHHHHH-HHHCCCEEEEEE--CC----CCHHHHHHHC-CCCCEEEEEECCCCCCCCCCCHHHH
T ss_conf 37799899727864888999874-232388799998--99----7757799753-7774599960489998742278999
Q ss_pred HHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHHCHHHHH-H
Q ss_conf 988641797899186201244320001232200-2356740456522567---4489833620565016646543223-4
Q gi|254780349|r 194 RSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAIFPGLQG-G 268 (433)
Q Consensus 194 ~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~avfPg~qg-~ 268 (433)
.+||++.|+.+++|.. .|...+++|+++ ||||..|+.|.+.|-- ||.|..+...-|.+ ..-||.+.. .
T Consensus 172 a~iA~~~g~~~vVDNT-----fatP~~~~Pl~~GaDivvhS~TKYi~GHsDvlgG~vv~~~~~~w~~--~~r~~~~~~~d 244 (431)
T PRK08248 172 ADIAHRHHIPLIVDNT-----FASPYLLRPIEFGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWAG--SGKFPGLTEPD 244 (431)
T ss_pred HHHHHHCCCEEEEECC-----CCCHHHCCHHHHCCCEEEEECCEECCCCCCEEEEEEEECCCCCCCC--CCCCCCCCCCC
T ss_conf 9999776985998667-----5303215834528988999665123688753547997067544000--23453235786
Q ss_pred HHHH------HHHHHHH----------HHHHHHCH-----------HHHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCC
Q ss_conf 4556------6689999----------99997356-----------4899999999888999999861685--2334588
Q gi|254780349|r 269 PFMH------SIAAKAV----------AFGEALSS-----------EFRDYAKQIVLNSQALAKKLQFLGF--DIVSGGT 319 (433)
Q Consensus 269 ~~~~------~iaa~av----------al~Ea~~~-----------~f~~Ya~qvv~NA~~La~~L~~~G~--~vv~ggT 319 (433)
|-.| .+...+. .+.-.+.| -...-.++-.+||..+|+.|.++.- +|..-|-
T Consensus 245 ~~~~~~~~~~~~g~~~~~~~~r~~~~~~~G~~~sp~da~L~lRGLrTL~lRm~r~~~nA~~lA~~L~~hp~V~~V~yPgL 324 (431)
T PRK08248 245 PSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNAFLLLQGLETLHLRMERHSENALAVAKFLEEHPAVESVSYPGL 324 (431)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC
T ss_conf 55335326876617899999999999852777880677999726897999999999889999999984899577989999
Q ss_pred CCC
Q ss_conf 898
Q gi|254780349|r 320 DNH 322 (433)
Q Consensus 320 d~H 322 (433)
.+|
T Consensus 325 ~sh 327 (431)
T PRK08248 325 PSH 327 (431)
T ss_pred CCC
T ss_conf 999
No 132
>PRK06375 consensus
Probab=99.60 E-value=1.2e-12 Score=108.49 Aligned_cols=350 Identities=13% Similarity=0.117 Sum_probs=198.3
Q ss_pred HHHHHHHCHHHHHHHHH-HHHHH---HHCCCCCCCC--CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 64697858999999999-99999---8388810430--102989999830510288657988875336006799999999
Q gi|254780349|r 11 QQSLIESDPDVFSLIGQ-ESCRQ---NDEIQLIASE--NIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIA 84 (433)
Q Consensus 11 ~~~l~~~Dpei~~~i~~-e~~rq---~~~l~LiASE--N~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la 84 (433)
.+-+...-|.....+.+ -.+-+ ++-|+|--.+ --+++.+.+++.-.+..-. -| |+-..-..++-+-.
T Consensus 3 ~~r~~~~~~~~~~~~~~~a~~l~~~G~dvi~l~iG~pdf~~P~~i~~a~~~~~~~~~-~~------Y~~~~G~~~lR~ai 75 (381)
T PRK06375 3 SSRLQYINESATVSASNRVEKLRKQGKKLYNFGIGEPDFTTPDNIIKYAFEMAKSGK-TH------YTPSAGIPELREKI 75 (381)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCC-CC------CCCCCCCHHHHHHH
T ss_conf 688621893899999999999997799707738999999868999999999973799-88------89999869999999
Q ss_pred HHHHHHHCCCCC--EECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 999998718863--010000167999999998315487488123344841114766543333322013665832356598
Q gi|254780349|r 85 IERAKKLFNVNF--VNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDM 162 (433)
Q Consensus 85 ~~~a~~lF~a~~--anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~ 162 (433)
.+..++-+|.+. -|+-..+|+.+-..++.++++|||+|+..+...-++.. .....| -+.++.+.+. +..+|+
T Consensus 76 a~~~~~~~g~~~~~~~i~vt~~~~~l~~~~~~l~~pGD~Vii~~P~Y~~y~~---~~~~~g--~~~v~~~~~~-~~~~d~ 149 (381)
T PRK06375 76 ALKLKSRNNIDAVAKNVLVTPTKFGINLAMMVILNPGDEVLIPSPYYVSYPD---IVKLAG--GKPVFVDTDD-DYNIDI 149 (381)
T ss_pred HHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH---HHHHHC--CEEEEEECCC-CCCCCH
T ss_conf 9999985599999576998548999999999866999989981888761999---999819--9776420388-779799
Q ss_pred HHHHHHHHHHCCCEEEEECCCCC--CC---CCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCC---C--EEEE
Q ss_conf 99999998604667897055243--53---6379999886417978991862012443200012322002---3--5674
Q gi|254780349|r 163 HEIESLAIEYNPKLIIVGGTAYS--RV---WDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHC---H--IVTT 232 (433)
Q Consensus 163 d~~~~~a~~~kPklIi~G~S~y~--~~---~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~A---D--vvt~ 232 (433)
|++++.+ ..+.|+|++-....| .. -.++++.++|.+.+.+++.|..| ..|+-.|.+.+|.... | |+.+
T Consensus 150 ~~l~~~i-~~~tk~i~l~nP~NPTG~v~s~e~l~~i~~la~~~~i~iIsDEiY-~~l~~~g~~~~~~~~~~~~~~~I~~~ 227 (381)
T PRK06375 150 DNMRKAV-TPKTRAIIINNPVNPTGKVLSEKEIRELVDFALENNLYIVSDEIY-EDLIYRGKLFSPASIPEAFDKTITLN 227 (381)
T ss_pred HHHHHHC-CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCH-HHHCCCCCCCCHHHHHHHHCCEEEEE
T ss_conf 9999637-867749998999798899999999999999887565899813205-75516998778534021106579984
Q ss_pred CCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH-HHHHHHHHHHHHHHHHHH
Q ss_conf 045652--25674489833620565016646543223445566689999999973564899-999999888999999861
Q gi|254780349|r 233 TTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRD-YAKQIVLNSQALAKKLQF 309 (433)
Q Consensus 233 sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~-Ya~qvv~NA~~La~~L~~ 309 (433)
|.-|+| +|=|-|.+...+ ++.++++..---...+.+.+.+.|+... +. ..++.+ .....-+|...+.+.|.+
T Consensus 228 S~SK~~~~~G~RiG~~i~~~-~~i~~~~~~~~~~~~~~~~~~q~aa~~a-l~---~~~~~~~~~~~~~~rr~~~~~~l~~ 302 (381)
T PRK06375 228 GFSKGYAMTGWRIGYMVAPE-EIVEAANKIQQQTITCASSISQYAALRA-LD---DDESPKHMREEFEKRRDLVVSILKE 302 (381)
T ss_pred HHHHHHHCCCCCEEEEEECH-HHHHHHHHHHHHCCCCCCHHHHHHHHHH-HC---CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 10224331465559998389-9999999999754467562999999999-62---8277999999999999999999851
Q ss_pred -CCCCCCC-CCCCCCEEEECCCCCCCCHHH-HHHHHHHCCEEEECCCCCCCCCCCCCCC---CCCCCCHHHHHCCCCHHH
Q ss_conf -6852334-588898126316655676799-9998885671880378998999988898---512246667307999899
Q gi|254780349|r 310 -LGFDIVS-GGTDNHLMLVDLRSKRMTGKR-AESILGRVSITCNKNSIPFDPESPFITS---GIRLGTPSGTTRGFKEKD 383 (433)
Q Consensus 310 -~G~~vv~-ggTd~H~vlvdl~~~~~~G~~-a~~~Le~~gI~~Nkn~iP~D~~~~~~~s---GiRlGT~aiTtrG~~e~e 383 (433)
.|+.+.. .| +-.+|+++.. +++..+ +++.|++.||.+. ||. .|-.. -+||.-. ..+++
T Consensus 303 ~~~~~~~~P~G--~~~~~~~~~~-~~~~~~~~~~ll~~~gV~v~----PG~---~Fg~~g~~~~Ri~~a------~~~e~ 366 (381)
T PRK06375 303 SDNLHVYEPEG--AFYVFPGYES-DIKSYKAAENLLENKNVVVT----PGS---AFGRQGEHHFRISFA------TSEDI 366 (381)
T ss_pred CCCCEEECCCE--EEEEEEECCC-CCCHHHHHHHHHHHCCEEEE----CCH---HHCCCCCCEEEEEEE------CCHHH
T ss_conf 89977956781--4899560799-98989999999985999997----873---548899997999981------99999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999960
Q gi|254780349|r 384 FEYIGELIAQILD 396 (433)
Q Consensus 384 m~~iA~li~~~L~ 396 (433)
+++-.+-|.+.++
T Consensus 367 l~ea~~RL~~~~~ 379 (381)
T PRK06375 367 IKEGIERIGKFFK 379 (381)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999998
No 133
>PRK08069 consensus
Probab=99.59 E-value=7.2e-12 Score=103.16 Aligned_cols=354 Identities=14% Similarity=0.159 Sum_probs=206.0
Q ss_pred HHHHHHHCH-HHHHHHHHHHHHH---HHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 646978589-9999999999999---83888104301--02989999830510288657988875336006799999999
Q gi|254780349|r 11 QQSLIESDP-DVFSLIGQESCRQ---NDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIA 84 (433)
Q Consensus 11 ~~~l~~~Dp-ei~~~i~~e~~rq---~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la 84 (433)
.+.+....| .+.+++..=.+.+ ++-|+|--.+- -++|.+.+++...+.... -| |+-+.-..++-+-.
T Consensus 4 s~r~~~~~~s~~~~i~~~a~~~~~~g~~vi~l~~G~pdf~~p~~i~~a~~~~~~~~~-~~------Y~~~~G~~~lreai 76 (390)
T PRK08069 4 AKRVAALTPSATLAITAKAKELKAEGHDVIGLGAGEPDFNTPEHIIDAAHKAMNEGH-TK------YTPSGGLQALKQEI 76 (390)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CC------CCCCCCHHHHHHHH
T ss_conf 158464993799999999999997699847899978999988999999999985489-98------98996729999999
Q ss_pred HHHHHHHCCCC--CEECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCC
Q ss_conf 99999871886--30100001679-9999999831548748812334484111476654333332201366583-23565
Q gi|254780349|r 85 IERAKKLFNVN--FVNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRK-EDGLL 160 (433)
Q Consensus 85 ~~~a~~lF~a~--~anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~-~~~~I 160 (433)
.+..++-+|.+ .-||-..+|++ |...++.+|++|||.|+..+....++.. .....| -+.+.++..+ ++..+
T Consensus 77 a~~~~~~~g~~~~p~~V~it~G~~~al~~~~~~l~~pGD~Vlv~~P~Y~~y~~---~~~~~g--~~~v~v~~~~~~~~~~ 151 (390)
T PRK08069 77 VKKFKRDQGLAYDPSEIIVCTGAKHALYTLFQVLLDEGDEVIIPTPYWVSYPE---QVKLAG--GKPVYVEGLEDNDFKI 151 (390)
T ss_pred HHHHHHHHCCCCCHHEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHH---HHHHHC--CEEEEECCCCCCCCCC
T ss_conf 99999986899881118987888999999999727998989980686642799---999818--8048714566678767
Q ss_pred CHHHHHHHHHHHCCCEEEEECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHH-CCCCCCCC------CC
Q ss_conf 9899999998604667897055243-----536379999886417978991862012443200-01232200------23
Q gi|254780349|r 161 DMHEIESLAIEYNPKLIIVGGTAYS-----RVWDWERFRSIADSIGAYLMADISHISGLVVGG-QHPSPVPH------CH 228 (433)
Q Consensus 161 D~d~~~~~a~~~kPklIi~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g-~~~~Pl~~------AD 228 (433)
|.|++++.+ ..++|+|++-....| -.-+++++.++|.+++.+++.|..| ..|+-.| .+++.... --
T Consensus 152 d~~~l~~~i-~~~~k~iil~~P~NPTG~v~s~e~l~~i~~la~~~~~~vi~DEiY-~~l~~~~~~~~s~~~~~~~~~~~~ 229 (390)
T PRK08069 152 TAEQLEEAI-TEKTKAVIINSPSNPTGMIYTKEELAALGEVCLEHDILIVSDEIY-EKLIYGGAEHVSIAQLSNELKEQT 229 (390)
T ss_pred CHHHHHHHC-CCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEHHH-HHHCCCCCCCCCHHHHCCCCCCCC
T ss_conf 999999854-436858998899698681655068999999987563059853323-654069989889899495434564
Q ss_pred EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5674045652--25674489833620565016646543223445566689999999973564899999999888999999
Q gi|254780349|r 229 IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKK 306 (433)
Q Consensus 229 vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~ 306 (433)
|+.+|.-|+| +|=|-|.+..++ ++.+++.+..--...+.+.+.+.++++ ++.+ .....+++.+..-+|.+.+.+.
T Consensus 230 i~~~s~SK~~~~~G~RiG~~~~~~-~li~~~~~~~~~~~~~~~~~~q~aa~~-a~~~-~~~~~~~~~~~~~~r~~~~~~~ 306 (390)
T PRK08069 230 IIINGVSKSHSMTGWRIGYAAGNK-QIIKAMTNLASHSTSNPTSIAQYGAIA-AYAG-SQEPVETMRQAFEERLNIIYDK 306 (390)
T ss_pred CEECCCHHHCCCCCCCEEEEECCH-HHHHHHHHHHHHCCCCCCHHHHHHHHH-HHHC-CHHHHHHHHHHHHHHHHHHHHH
T ss_conf 100353020377632358876699-999999999865357776399999999-9868-8687999999999999999999
Q ss_pred HHHC-CCCCCCCCCCCCEEEECCCCC----CC-CHHH-HHHHHHHCCEEEECCCCCCCCCCCC-CCCCCCCCCHHHHHCC
Q ss_conf 8616-852334588898126316655----67-6799-9998885671880378998999988-8985122466673079
Q gi|254780349|r 307 LQFL-GFDIVSGGTDNHLMLVDLRSK----RM-TGKR-AESILGRVSITCNKNSIPFDPESPF-ITSGIRLGTPSGTTRG 378 (433)
Q Consensus 307 L~~~-G~~vv~ggTd~H~vlvdl~~~----~~-~G~~-a~~~Le~~gI~~Nkn~iP~D~~~~~-~~sGiRlGT~aiTtrG 378 (433)
|.+. |+.++.. .-+-.+|+|++.. ++ +-.+ +...|++.||.+. ||. .| .+.-+||.-.
T Consensus 307 l~~~~g~~~~~P-~Gg~ylw~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~----PG~---~Fg~~~~~Rl~fa------ 372 (390)
T PRK08069 307 LIQIPGFTCIKP-QGAFYLFPNVKEAAALSGFETVDEFVKALLEEEKVALV----PGS---GFGAPDNVRLSYA------ 372 (390)
T ss_pred HHHCCCCCCCCC-CEEEEEEEECCHHHCCCCCCCHHHHHHHHHHHCCEEEE----CCC---CCCCCCCEEEEEE------
T ss_conf 850668851479-80389978773111226788899999999985999998----187---6799983899984------
Q ss_pred CCHHHHHHHHHHHHHHH
Q ss_conf 99899999999999996
Q gi|254780349|r 379 FKEKDFEYIGELIAQIL 395 (433)
Q Consensus 379 ~~e~em~~iA~li~~~L 395 (433)
..++++++-.+-|.+.|
T Consensus 373 ~~~~~l~eal~RL~~~l 389 (390)
T PRK08069 373 TSLELLEEAIERIHRFM 389 (390)
T ss_pred CCHHHHHHHHHHHHHHH
T ss_conf 99999999999999985
No 134
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.59 E-value=1.1e-13 Score=115.80 Aligned_cols=245 Identities=18% Similarity=0.149 Sum_probs=162.4
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00679999999999999871886301000016799999999831548748812334484111476654333332201366
Q gi|254780349|r 73 GCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 73 G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
|+--.+.+| ++..+|-|+++|-+-+ ||..|-.+ +++++++||+|+..+.-.||-..--.. .+...+.++..
T Consensus 50 ~nPt~~~le----~~la~LEg~~~a~~f~-SGmaAi~~-~l~~l~~Gd~vv~~~~~Yg~t~~~~~~-~l~~~Gi~~~~-- 120 (366)
T PRK08247 50 KNPTRGLLE----QAIADLEGGDQGFACS-SGMAAIQL-VMSLFRSGDELIVSSDLYGGTYRLFEE-HWKKWGVRFVY-- 120 (366)
T ss_pred CCHHHHHHH----HHHHHHHCCCCEEECC-CHHHHHHH-HHHHHCCCCEEEEECCCCCCHHHHHHH-HHCCCCEEEEE--
T ss_conf 986799999----9999982985053116-68999999-999738999899958968648899887-75077469998--
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCE
Q ss_conf 583235659899999998604667897055243--53637999988641797899186201244320001232200-235
Q gi|254780349|r 153 VRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHI 229 (433)
Q Consensus 153 ~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADv 229 (433)
+|. -|.+++++.+. .+.|+|++.....| +..|++++++||++.|+.+++|.. .|+..+++||++ |||
T Consensus 121 ~d~----~d~~~~~~~i~-~~Tkli~~Esp~NP~l~v~Di~~i~~iA~~~g~~~vvDNT-----~atP~~~~Pl~~GaDi 190 (366)
T PRK08247 121 VNT----ASIKAIEQAIT-PNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNT-----FYTPVLQRPLTEGADI 190 (366)
T ss_pred ECC----CCHHHHHHHCC-CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCC-----CCCCCCCCCHHCCCCE
T ss_conf 488----89799997538-6754999855999853501599999998646704984177-----3441335741028978
Q ss_pred EEECCCCCCCCCC---CEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6740456522567---4489833620565016646543223445566689999999973564899999999888999999
Q gi|254780349|r 230 VTTTTHKSLRGPR---GGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKK 306 (433)
Q Consensus 230 vt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~ 306 (433)
|..|+.|.+.|.- ||.++++++++++++.... ...| ..++-.-+- -+..-+ .-...-.++..+||..+|+.
T Consensus 191 vihS~TKyi~GhsDvl~G~vv~~~~~~~~~l~~~~--~~~G-~~~~p~~a~--l~~rGl-~TL~lR~~~~~~nA~~lA~~ 264 (366)
T PRK08247 191 VIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQ--NAAG-AVLSPFDSW--LLIRGM-KTLALRMRQHEENAKALAAF 264 (366)
T ss_pred EEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHH--HHCC-CCCCHHHHH--HHHCCC-CCHHHHHHHHHHHHHHHHHH
T ss_conf 99742420158887154799727388888999999--7336-677937777--886352-50999999999999999999
Q ss_pred HHHCCC-CCC-CCCCCCCEEEECCCCCCCCHHHHHHHHHHCCE
Q ss_conf 861685-233-45888981263166556767999998885671
Q gi|254780349|r 307 LQFLGF-DIV-SGGTDNHLMLVDLRSKRMTGKRAESILGRVSI 347 (433)
Q Consensus 307 L~~~G~-~vv-~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI 347 (433)
|.++-- .-| .-|. .-++-+++++ +..+.+.++...+
T Consensus 265 L~~hp~V~~V~yPG~-gg~~sf~l~~----~~~~~~f~~~l~l 302 (366)
T PRK08247 265 LNEQPGVTDVLYPGK-GGMLSFRLQD----EEWVNPFLKSLKL 302 (366)
T ss_pred HHCCCCEEEEECCCC-CCEEEEEECC----HHHHHHHHHHCCC
T ss_conf 861997048956998-7779999788----8999999984743
No 135
>PRK05794 consensus
Probab=99.59 E-value=4e-12 Score=104.89 Aligned_cols=355 Identities=15% Similarity=0.181 Sum_probs=202.5
Q ss_pred HHHHHHHCHHHHHHHHHHHHH-H---HHCCCCCCCC-CC-CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 646978589999999999999-9---8388810430-10-2989999830510288657988875336006799999999
Q gi|254780349|r 11 QQSLIESDPDVFSLIGQESCR-Q---NDEIQLIASE-NI-VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIA 84 (433)
Q Consensus 11 ~~~l~~~Dpei~~~i~~e~~r-q---~~~l~LiASE-N~-~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la 84 (433)
.+.+....|....-|.++..+ + ++.|+|--.+ ++ +++.+.+++...+.+... | |+-..-..++-+-.
T Consensus 4 s~r~~~~~~~~~~~i~~~a~~~~~~G~dvi~l~iG~pd~~~p~~i~~a~~~~~~~~~~-~------Y~~~~G~~~lReai 76 (397)
T PRK05794 4 SKKALQIQPSLTLEITAKAKKMKAEGIDVIGFGAGEPDFNTPENIKEAAIDAIEEGYT-K------YTPASGILELKQAI 76 (397)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCC-C------CCCCCCCHHHHHHH
T ss_conf 1585629937999999999999977998278989799999789999999999855899-8------98997729999999
Q ss_pred HHHHHHHCCCC--CEECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCC
Q ss_conf 99999871886--30100001679-99999998315487488123344841114766543333322013665832-3565
Q gi|254780349|r 85 IERAKKLFNVN--FVNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKE-DGLL 160 (433)
Q Consensus 85 ~~~a~~lF~a~--~anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~-~~~I 160 (433)
.+..++-+|.+ .-||-..+|++ |...++.+|++|||.|+..+...-++.. .....| -..+.++.+++ +..+
T Consensus 77 a~~~~~~~g~~v~~~~I~it~G~~~al~~~~~~l~~pGD~Vlv~~P~Y~~y~~---~~~~~g--~~~v~~~~~~~~~~~~ 151 (397)
T PRK05794 77 CDKFKKDNGLNYEPSNIIVSNGAKQSLSNAFEAILNPGDEVIIPVPYWVSYPE---LVKLAD--GVPVFVDTKEENDFKY 151 (397)
T ss_pred HHHHHHHHCCCCCHHEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHH---HHHHCC--CCEEEEECCCCCCCCC
T ss_conf 99999985899980018987885999999999966998989982687643499---999718--8029965673237777
Q ss_pred CHHHHHHHHHHHCCCEEEEECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHH-CCCCCCCCC----C--
Q ss_conf 9899999998604667897055243-----536379999886417978991862012443200-012322002----3--
Q gi|254780349|r 161 DMHEIESLAIEYNPKLIIVGGTAYS-----RVWDWERFRSIADSIGAYLMADISHISGLVVGG-QHPSPVPHC----H-- 228 (433)
Q Consensus 161 D~d~~~~~a~~~kPklIi~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g-~~~~Pl~~A----D-- 228 (433)
|.|++++.+. .++|++++-....| -.-+++++.++|.+.+.+++.|..|- .|+-.+ .+++..... +
T Consensus 152 d~~~l~~~~~-~~~k~iil~~P~NPtG~v~s~~~l~~l~~la~~~~i~visDEiY~-~l~~~~~~~~s~~~~~~~~~~~~ 229 (397)
T PRK05794 152 TIEELENAIT-SKTKAIIINSPNNPTGTVYSKEELEEIAKFAKEHDLFIISDEIYE-KLIYGEEEHISIASLSEDAFKRT 229 (397)
T ss_pred CHHHHHHHCC-CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCEEEEECHHHHH-HHHCCCCCCCCHHHHCHHHHCCC
T ss_conf 9999997533-357189978998987824350679999976541036884333457-76258988878899561432033
Q ss_pred EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5674045652--25674489833620565016646543223445566689999999973564899999999888999999
Q gi|254780349|r 229 IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKK 306 (433)
Q Consensus 229 vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~ 306 (433)
|+.+|.-|+| +|=|-|.+..++ ++.+++.+.-.-...+.+.+.+.|+. .++ +.-...........-++...|.+.
T Consensus 230 i~~~S~SK~~~~~G~RvG~~~~~~-~~~~~~~~~~~~~~~~~~~~~q~a~~-~al-~~~~~~~~~~~~~~~~rr~~l~~~ 306 (397)
T PRK05794 230 VVINGMSKAYAMTGWRIGYAASSL-EIIKVMSNIQSHTTSNPNSIAQYASL-EAL-NGDQEQIKNMVEEFKKRRDYMVER 306 (397)
T ss_pred EECCCCCCCCCCCCCEEEEEECCH-HHHHHHHHHHHHCCCCCCHHHHHHHH-HHH-HCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 202676444477652258775589-99999999998666897699999999-998-587999999999999999999999
Q ss_pred HHHC-CCCCCC-CCCCCCEEEECCCCC--------CC-CHHH-HHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 8616-852334-588898126316655--------67-6799-9998885671880378998999988898512246667
Q gi|254780349|r 307 LQFL-GFDIVS-GGTDNHLMLVDLRSK--------RM-TGKR-AESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSG 374 (433)
Q Consensus 307 L~~~-G~~vv~-ggTd~H~vlvdl~~~--------~~-~G~~-a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~ai 374 (433)
|.+. |+.+.. .|+ -.+|+|++.. .+ +..+ ++..|++.||.+. ||..= ..+.-+||.-.
T Consensus 307 l~~~~g~~~~~P~g~--~y~~~~~~~~~~~~~~~~~~~~~~~f~~~ll~~~gV~v~----PG~~F--g~~~~vRl~f~-- 376 (397)
T PRK05794 307 INSIKGLSCIKPKGA--FYVMVNISKVIGKEIKGNTIKGSIDFANLLLEEENVAVV----PGIAF--GMDNYIRLSYA-- 376 (397)
T ss_pred HHHCCCCEEECCCEE--EEEEEECHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEE----ECCCC--CCCCEEEEEEE--
T ss_conf 860799676068813--699587834425334688778999999999984999998----18535--89983999982--
Q ss_pred HHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 3079998999999999999960
Q gi|254780349|r 375 TTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 375 TtrG~~e~em~~iA~li~~~L~ 396 (433)
..++++++-.+-|.++|+
T Consensus 377 ----~~~e~l~eal~RL~~~l~ 394 (397)
T PRK05794 377 ----TSMENIEKGLDRIENFLN 394 (397)
T ss_pred ----CCHHHHHHHHHHHHHHHH
T ss_conf ----999999999999999998
No 136
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.58 E-value=2.2e-13 Score=113.73 Aligned_cols=286 Identities=18% Similarity=0.159 Sum_probs=166.5
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHH
Q ss_conf 88104301029899998305102886579888753360067999999999999987188630100001679999999983
Q gi|254780349|r 36 IQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLAL 115 (433)
Q Consensus 36 l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~AL 115 (433)
-+...|..|.-+...+.. ..+..+ ..||-=.|+ |+--.+.+| ++..+|-|++.+-+- -||..|-.++++++
T Consensus 29 ~PIy~sstf~f~~~~~~~-~~~~~~-~~g~~YsR~--gNPT~~~LE----~~la~LEgg~~a~~~-sSGmaAis~~l~~l 99 (433)
T PRK08134 29 VPIYLTTSFVFEDSDHAA-ALFNLE-RAGHVYSRI--SNPTTAVLE----ERVAALEGGVGAIAT-ASGQAALHLAIATL 99 (433)
T ss_pred CCCCCCCCEECCCHHHHH-HHHCCC-CCCCEECCC--CCHHHHHHH----HHHHHHCCCCCEEEE-CCHHHHHHHHHHHH
T ss_conf 883278785028878998-763576-679601499--886699999----999998099827985-38899999999974
Q ss_pred HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHH
Q ss_conf 1548748812334484111476654333332201366583235659899999998604667897055243--53637999
Q gi|254780349|r 116 MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERF 193 (433)
Q Consensus 116 l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l 193 (433)
++|||+|+..+--.||-..--. ..+...+.++..+ |+ -|.+++++.+ +.+.|+|++.....| +..|++++
T Consensus 100 l~~Gd~iv~~~~~YggT~~l~~-~~l~~~Gi~~~~v--d~----~d~~~~~~~i-~~~Tklv~~EspsNP~l~v~Di~ai 171 (433)
T PRK08134 100 MGAGSHIVASSALYGGSHNLLH-YTLPRFGIETTFV--KP----RDIDGWRAAI-RPNTRLLFGETLGNPGLEVLDIPTV 171 (433)
T ss_pred CCCCCEEEECCCEECCHHHHHH-HHHHHCCEEEEEE--CC----CCHHHHHHHC-CCCCEEEEEECCCCCCCCCCCHHHH
T ss_conf 8999989971880773799999-8776348379998--89----7846788755-9875289985389997503589999
Q ss_pred HHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHHCHHHHHH-
Q ss_conf 988641797899186201244320001232200-2356740456522567---44898336205650166465432234-
Q gi|254780349|r 194 RSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAIFPGLQGG- 268 (433)
Q Consensus 194 ~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~avfPg~qg~- 268 (433)
.+||++.|+.+++|.. .|...+++||++ ||||..|+.|.+.|-- ||+|..+...-|+. +.-||-+...
T Consensus 172 a~iA~~~g~~~vVDNT-----~atP~~~~Pl~~GaDivvhS~TKYl~GHsDvlgG~vv~~~~~~w~~--~~~~~~l~~~~ 244 (433)
T PRK08134 172 AAIAHEAGVPLLVDST-----FTTPYLLRPFEHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEA--SGKFPELTEPY 244 (433)
T ss_pred HHHHHHCCCEEEEECC-----CCHHHHCCHHHHCCCEEEEECCEEECCCCCEEEEEEECCCCCCHHH--CCCCHHHHCCH
T ss_conf 9999756761997166-----5115305805528988999654672588754778985165201655--04416663761
Q ss_pred --HHH---HHH---HH-HHHH-------HHHHHCH-----------HHHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCC
Q ss_conf --455---666---89-9999-------9997356-----------4899999999888999999861685--2334588
Q gi|254780349|r 269 --PFM---HSI---AA-KAVA-------FGEALSS-----------EFRDYAKQIVLNSQALAKKLQFLGF--DIVSGGT 319 (433)
Q Consensus 269 --~~~---~~i---aa-~ava-------l~Ea~~~-----------~f~~Ya~qvv~NA~~La~~L~~~G~--~vv~ggT 319 (433)
.|- ... ++ +.-+ +.-.+.| -...-.+|-.+||.++|+.|.++-- +|..-|-
T Consensus 245 ~~~~~~~~~~~~~~~~~~~r~~~~~lr~~G~~lsp~da~L~lRGL~TL~lRm~r~~~nA~~lA~~L~~hp~V~~V~yPgL 324 (433)
T PRK08134 245 AGFHGMVFDEESTVAAFLLRARREGLRDFGACLSPMNAWQLLQGIETLPLRMERHVANTRAVVEFLASHPAVERVAHPEL 324 (433)
T ss_pred HHHCCCHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC
T ss_conf 54304046654047899999999987642766683677998736776899999999879999999985899678989898
Q ss_pred CCC----------------EEEECCCCCCCCHHHHHHHHHHCCEE
Q ss_conf 898----------------12631665567679999988856718
Q gi|254780349|r 320 DNH----------------LMLVDLRSKRMTGKRAESILGRVSIT 348 (433)
Q Consensus 320 d~H----------------~vlvdl~~~~~~G~~a~~~Le~~gI~ 348 (433)
.+| ++-++++. +-..+.+.++...+.
T Consensus 325 ~s~p~h~la~r~~~~G~Gg~~sf~l~g---~~~~~~~f~~~l~lf 366 (433)
T PRK08134 325 ESHPDHALAKRLLPRGAGSVFSFDLKG---GRAAGRKFIESLKLF 366 (433)
T ss_pred CCCCCHHHHHHHCCCCCEEEEEEEEEC---CHHHHHHHHHHCCCC
T ss_conf 998029999987899965899999969---999999999838813
No 137
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.58 E-value=4.4e-12 Score=104.64 Aligned_cols=317 Identities=17% Similarity=0.195 Sum_probs=201.5
Q ss_pred HHCCCCCCCCCCC--CHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH-HHH
Q ss_conf 8388810430102--9899998305102886579888753360067999999999999987188630100001679-999
Q gi|254780349|r 33 NDEIQLIASENIV--SRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQ-MNQ 109 (433)
Q Consensus 33 ~~~l~LiASEN~~--S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~-An~ 109 (433)
.+-|.|=+.||.. ||.|++++...+.. ..-|| ..++.+ | ++...+.+|.+--+|=..+|+. +-.
T Consensus 29 ~~ii~ls~Nenp~g~~~~v~~a~~~~~~~--~~~YP------d~~~~~----L-r~~iA~~~gv~~~~I~v~nGs~e~i~ 95 (359)
T PRK03158 29 SKIVKLASNENPFGCSPRVTEALASEASQ--YALYP------DGYAFE----L-RTKVAKHLGVKEEQLIFGNGSDEVIQ 95 (359)
T ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHHHH--CCCCC------CCCHHH----H-HHHHHHHHCCCHHHEEECCCHHHHHH
T ss_conf 97689508999999999999999987873--67696------988899----9-99999986848677998478899999
Q ss_pred HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CC
Q ss_conf 9999831548748812334484111476654333332201366583235659899999998604667897055243--53
Q gi|254780349|r 110 GVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RV 187 (433)
Q Consensus 110 av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~ 187 (433)
.++.++++|||+|+..+...+.+-. .....|.... .+++. ++..|.|++.+.+. .++|+|++.....| ..
T Consensus 96 ~~~~~~~~~g~~vvi~~P~f~~Y~~---~a~~~g~~~~--~vpl~--d~~~dl~~~~~~i~-~~tklv~l~nPnNPTG~~ 167 (359)
T PRK03158 96 IISRALLHEGTNTVMANPTFSQYRH---NAVIEGAEVR--EVPLK--DGIHDLDAMLEAID-ENTKIVWICNPNNPTGTY 167 (359)
T ss_pred HHHHHHHCCCCEEECCCCEEEHHHH---HHHHCCCEEE--EECCC--CCCCCHHHHHHHCC-CCCCEEEECCCCCCCCCC
T ss_conf 9999980799811137982055599---9976285379--96267--77669999997507-588789974899998887
Q ss_pred CCHHHHHHHHHHC--CCEEEECCCCHHHHHHHHCCCCCCCC----CC-EEEECCCCCC--CCCCCEEEEECCCCHHHHCC
Q ss_conf 6379999886417--97899186201244320001232200----23-5674045652--25674489833620565016
Q gi|254780349|r 188 WDWERFRSIADSI--GAYLMADISHISGLVVGGQHPSPVPH----CH-IVTTTTHKSL--RGPRGGLIMTNHADLAKKIN 258 (433)
Q Consensus 188 ~d~~~l~eIa~~~--ga~l~~D~aH~~GLIa~g~~~~Pl~~----AD-vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~ 258 (433)
++.+++.++++.. +.++++|.+.. -++-..-+++.++. -+ +|+.|.-|++ +|=|=|.++++. ++.++++
T Consensus 168 ~~~~~l~~l~~~~~~~~~vvvDEaY~-ef~~~~~~~~~~~l~~~~~nviv~rsfSK~~~laGlRlGy~ia~~-~li~~l~ 245 (359)
T PRK03158 168 VEKQKLLAFLEKVPKSVLVVLDEAYY-EYVTAEDYPQTLPLLEKYENLMILRTFSKAYGLAALRVGYGIADE-ELIGQLE 245 (359)
T ss_pred CCCHHHHHHHHHCCCCEEEEEEHHHH-HHHCCCCCCCHHHHHHHCCCEEEECCCCHHCCCCCCCCEECCCCH-HHHHHHH
T ss_conf 65234899997485772999722788-873257862035676532562365156541068888522031899-9999999
Q ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHH
Q ss_conf 64654322344556668999999997356489999999988899999986168523345888981263166556767999
Q gi|254780349|r 259 SAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRA 338 (433)
Q Consensus 259 ~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a 338 (433)
+..-|...+. +.+.||.+. | + -+...+++.+.+.+.-+.+.+.|.+.|+.+.. ++..-+|+++ +.++++.
T Consensus 246 ~~~~~~~v~~--~aq~aa~aa-l-~-d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~p--s~anF~l~~~---~~~~~~~ 315 (359)
T PRK03158 246 PARLPFNTST--IAQAAALAA-L-E-DQAFIQECVKKNAEGLKQYYAFCKEYGVFYYP--SQTNFVLIDL---GIPGDEV 315 (359)
T ss_pred HHCCCCCCHH--HHHHHHHHH-H-C-CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC--CCCCEEEEEC---CCCHHHH
T ss_conf 8538868569--999999999-5-7-99999999999999999999999868888999--9850899868---9999999
Q ss_pred HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 998885671880378998999988898512246667307999899999999999996
Q gi|254780349|r 339 ESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 339 ~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
.+.|.+.||.+-...-. ..+..+||..- ..+|++.+-+-+.++|
T Consensus 316 ~~~L~~~gi~Vr~g~~f------g~~~~iRIsvg-------t~~en~~ll~aL~~il 359 (359)
T PRK03158 316 FEYLLKKGYIVRSGAAL------GFPTGIRITVG-------LKEENDEIIELLAELL 359 (359)
T ss_pred HHHHHHCCEEEEECCCC------CCCCEEEEEEC-------CHHHHHHHHHHHHHHC
T ss_conf 99998199399968989------99898999948-------9999999999999869
No 138
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.58 E-value=1.7e-12 Score=107.56 Aligned_cols=270 Identities=16% Similarity=0.135 Sum_probs=174.8
Q ss_pred HHHHHHHHHHHCCCCC---EECCCHHHHH-HHHHHHHHHHCCCCE---EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999998718863---0100001679-999999983154874---88123344841114766543333322013665
Q gi|254780349|r 81 ENIAIERAKKLFNVNF---VNVQSHSGSQ-MNQGVFLALMHPGDS---FMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNV 153 (433)
Q Consensus 81 E~la~~~a~~lF~a~~---anvqp~SG~~-An~av~~ALl~pGD~---Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~ 153 (433)
|.+| +..++-+|.+. .+|=..+|+. |...+..+++.|||. |+..+....++.. .......+.+++++
T Consensus 43 ~aia-~~~~~~~g~~~~~d~~I~~t~Ga~~al~~~~~~~~~~gd~~~~Vlv~~P~y~~y~~-----~~~~~g~~~~~v~l 116 (350)
T TIGR03537 43 DAIS-GWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYER-----GALFAGGEPTPVKL 116 (350)
T ss_pred HHHH-HHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHH-----HHHHCCCEEEEEEC
T ss_conf 9999-99999868998978779987883899999999973888778769994698730699-----99976998999753
Q ss_pred CCCC-CCCCHHHHHHHHHHHCCCEEEEECCCCC--CC---CCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-
Q ss_conf 8323-5659899999998604667897055243--53---637999988641797899186201244320001232200-
Q gi|254780349|r 154 RKED-GLLDMHEIESLAIEYNPKLIIVGGTAYS--RV---WDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH- 226 (433)
Q Consensus 154 d~~~-~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~---~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~- 226 (433)
+.++ ..+|++++++.+. .+.|++++.....| .. -+++++.++|+++|.+++.|.+|.- |+-++..++.+..
T Consensus 117 ~~~~g~~~d~e~l~~~~~-~~~~~i~l~nP~NPTG~v~s~~~l~~l~~~a~~~~~~vi~DE~Y~~-l~~~~~~~~~~~~~ 194 (350)
T TIGR03537 117 KEEDGFLLRLEKVDKEIL-KETKIVWINYPHNPTGAVAPRSYLEETIAICQEHNIILCSDECYTE-IYFGEPPHSALEVG 194 (350)
T ss_pred CCCCCCCCCHHHHHHHCC-CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEHHHHH-HHCCCCCCCHHHHC
T ss_conf 554488779999997466-6871999899989836476999999999863236907984312245-53489987755634
Q ss_pred CC--EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q ss_conf 23--5674045652--2567448983362056501664654322344556668999999997356489999999988899
Q gi|254780349|r 227 CH--IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQA 302 (433)
Q Consensus 227 AD--vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~ 302 (433)
.| |+..|.-|++ +|-|-|.+..+ +++.+++.+...+...+.+..-+.++.+ ++.+ .....+..+...++...
T Consensus 195 ~~~~i~~~S~SK~~~~pGlR~G~~~~~-~~li~~~~~~~~~~~~~~~~~~q~a~~~-~~~~--~~~~~~~~~~~~~~r~~ 270 (350)
T TIGR03537 195 MENVLAFHSLSKRSGMTGYRSGFVAGD-EKLISFLKKLRANFGVASPDFVQAAAKA-AWSD--DSHVIERRKIFRRKRDL 270 (350)
T ss_pred CCCEEEEECCCCCCCCCCCEEEEEECC-HHHHHHHHHHHHHCCCCHHHHHHHHHHH-HHCC--HHHHHHHHHHHHHHHHH
T ss_conf 687799966754504677559999789-9999999998620677728999999999-9568--09999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCC---CCCCCCC
Q ss_conf 99998616852334588898126316655676799999888567188037899899998889---8512246
Q gi|254780349|r 303 LAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFIT---SGIRLGT 371 (433)
Q Consensus 303 La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~---sGiRlGT 371 (433)
+.+.|.+.|+.++.. .-+-.+|+++. .+.+..+..+.|.+.||.+. ||. .|-+ .-+||.-
T Consensus 271 ~~~~l~~~g~~~~~p-~g~~~~w~~~~-~~~~~~~~~~~ll~~gV~v~----pG~---~Fg~~~~~~~Rl~~ 333 (350)
T TIGR03537 271 FLEFFNKKGLEYLYP-DATFYLWVKVP-NGISSKDYALRLLENGIVVA----PGE---NFGSGEEGYVRVAL 333 (350)
T ss_pred HHHHHHHCCCEEECC-CCEEEEEEECC-CCCCHHHHHHHHHHCCEEEE----CCH---HHCCCCCCEEEEEE
T ss_conf 999986489888268-82259989799-99899999999997998997----673---11899998699997
No 139
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.58 E-value=1.1e-13 Score=115.83 Aligned_cols=249 Identities=20% Similarity=0.177 Sum_probs=164.4
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00679999999999999871886301000016799999999831548748812334484111476654333332201366
Q gi|254780349|r 73 GCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 73 G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
|+--.+.+|+ +..+|=|++++-.-+ ||..|-.+++.++++|||+|+..+-..||-...-..+ +.-...++..
T Consensus 61 ~nPT~~~lE~----~~a~LEg~~~~~afs-SGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~-l~~~gi~~~~-- 132 (396)
T COG0626 61 GNPTRDALEE----ALAELEGGEDAFAFS-SGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKI-LQKFGVEVTF-- 132 (396)
T ss_pred CCCCHHHHHH----HHHHHHCCCCEEEEC-CCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH-HHHCCEEEEE--
T ss_conf 8963799999----999860988379953-7399999999983579998984577643299999999-9856859999--
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCE
Q ss_conf 583235659899999998604667897055243--53637999988641797899186201244320001232200-235
Q gi|254780349|r 153 VRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHI 229 (433)
Q Consensus 153 ~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADv 229 (433)
+|+ -|-+++++.+.+.++|+|++...+.| +..|+++++++|+++|+++++|.. .+++++|+|+++ |||
T Consensus 133 ~d~----~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNT-----fatP~~q~PL~~GaDI 203 (396)
T COG0626 133 VDP----GDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNT-----FATPVLQRPLELGADI 203 (396)
T ss_pred ECC----CCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECC-----CCCCCCCCHHHHCCCE
T ss_conf 789----9758899874466834999967999630555699999999864988999889-----6622016855509978
Q ss_pred EEECCCCCCCCCC---CEEEEECCCCHHHHCCHHHC--HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Q ss_conf 6740456522567---44898336205650166465--432234455666899999999735648999999998889999
Q gi|254780349|r 230 VTTTTHKSLRGPR---GGLIMTNHADLAKKINSAIF--PGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALA 304 (433)
Q Consensus 230 vt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~avf--Pg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La 304 (433)
|..|..|.|.|-- +|+++++++++++++-.... -|.+-+|+-.-+ .++- +. -+..-++|.-+||+++|
T Consensus 204 VvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l-----~lRG-lk-TL~~Rm~~~~~nA~~IA 276 (396)
T COG0626 204 VVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWL-----LLRG-LR-TLALRMERHNENALKIA 276 (396)
T ss_pred EEEECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHH-----HHHC-CC-HHHHHHHHHHHHHHHHH
T ss_conf 99854333367735041688448689999999998865278788799999-----9817-15-39999999999899999
Q ss_pred HHHHHCC-CC-CCCCCC---------------CCCEEEECCCCCCCCHHHHHHHHHHCCEEE
Q ss_conf 9986168-52-334588---------------898126316655676799999888567188
Q gi|254780349|r 305 KKLQFLG-FD-IVSGGT---------------DNHLMLVDLRSKRMTGKRAESILGRVSITC 349 (433)
Q Consensus 305 ~~L~~~G-~~-vv~ggT---------------d~H~vlvdl~~~~~~G~~a~~~Le~~gI~~ 349 (433)
+-|.++. +. |..-|= -.-++=+++++ |.++.+.++...+..
T Consensus 277 ~~L~~~p~V~~V~yPgl~shp~he~~krq~~g~gg~~Sf~l~~----~~~~~~f~~~L~l~~ 334 (396)
T COG0626 277 EFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN----EEAAKKFLDSLKLFK 334 (396)
T ss_pred HHHHCCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEECC----HHHHHHHHHHCCCCE
T ss_conf 9986299768998999988976899997457986089999678----589999997278237
No 140
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.58 E-value=1.6e-11 Score=100.81 Aligned_cols=342 Identities=14% Similarity=0.154 Sum_probs=206.6
Q ss_pred HHHHHHH--HHHHHHH----HCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9999999--9999998----3888104301--029899998305102886579888753360067999999999999987
Q gi|254780349|r 20 DVFSLIG--QESCRQN----DEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKL 91 (433)
Q Consensus 20 ei~~~i~--~e~~rq~----~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~l 91 (433)
=++.-|. ++..|++ +-|+|-..|- .+++.+.+++.-.+.+-.. +||.- .-+.++-+-..+..++-
T Consensus 25 y~~~~~~~~~~~~~~~~~~~DVI~L~iGePDf~tP~~i~~a~~~a~~~~~~------~y~~~-~G~~eLReaIa~~~~~~ 97 (411)
T PRK06290 25 YKFEKIKRAKQAAKKKYPDMELIDMGVGEPDEMADESVVEVLCEEAKKPEN------RGYAD-NGIQELKEAAARYMEKV 97 (411)
T ss_pred EEHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCC------CCCCC-CCHHHHHHHHHHHHHHH
T ss_conf 108999999999998687998777899899998799999999999837998------88898-76499999999999997
Q ss_pred CCCCC----EECCCHHHH-HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHH
Q ss_conf 18863----010000167-9999999983154874881233448411147665433333220136658323-56598999
Q gi|254780349|r 92 FNVNF----VNVQSHSGS-QMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-GLLDMHEI 165 (433)
Q Consensus 92 F~a~~----anvqp~SG~-~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~~ID~d~~ 165 (433)
||.+. .+|-..+|+ .|...++.+|+.|||.|+.+++..=.+ ...+...| -+.+++++++++ ..+|.+++
T Consensus 98 ~gv~~~dp~~eIivt~Ga~~al~~~~~all~pGDeVli~~P~yp~Y---~~~~~~~G--~~~v~vp~~~e~~~~~d~~~l 172 (411)
T PRK06290 98 YGVKDLDPVTEVIHSIGSKPALAYLPSCFINPGDVTLMTVPGYPVT---ATHTKWYG--GEVYNLPLLEENNFLPDLDAI 172 (411)
T ss_pred CCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHH---HHHHHHCC--CEEEEEECCCCCCCCCCHHHH
T ss_conf 1998789776799898889999999999669999899868873658---99999849--989998656667876595771
Q ss_pred HHHHHHHCCCEEEEECCCCC--C---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--C-C--EEEECCC
Q ss_conf 99998604667897055243--5---3637999988641797899186201244320001232200--2-3--5674045
Q gi|254780349|r 166 ESLAIEYNPKLIIVGGTAYS--R---VWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--C-H--IVTTTTH 235 (433)
Q Consensus 166 ~~~a~~~kPklIi~G~S~y~--~---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--A-D--vvt~sTH 235 (433)
++.+. .|+|+|++.....| . .-.++++.++|++.+.+++.|..+ ..|+-.+...+++.. + + |+..|.-
T Consensus 173 ~~~i~-~ktK~iilnsP~NPTG~v~s~e~l~~i~~~a~~~~i~vIsDEiY-~~l~yd~~~~s~~s~~~~~~~~I~i~S~S 250 (411)
T PRK06290 173 PKDVL-EKAKLLYLNYPNNPTGAVATKEFYKEVVDFAFENDIIVVQDAAY-AALTFDGKPLSFLSVPGAKEVGVEIHSFS 250 (411)
T ss_pred HHHCC-CCCEEEEECCCCCCCCEEECHHHHHHHHHHHHHCCCEEECHHHH-HHHEECCCCCCCCCCCCCCCEEEEECCCC
T ss_conf 98625-57659998899999861424899999999986428776423535-55100897776102567744179982577
Q ss_pred CCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 652--256744898336205650166465432234455666899999999735648-99999999888999999861685
Q gi|254780349|r 236 KSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEF-RDYAKQIVLNSQALAKKLQFLGF 312 (433)
Q Consensus 236 Ktl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f-~~Ya~qvv~NA~~La~~L~~~G~ 312 (433)
|++ +|=|-|.+..++ ++.+++.+..-....+.+..-+.|+.+ +|. .+++ .+..+...++...|.+.|.+.|+
T Consensus 251 K~~~mtGwRiG~~i~~~-~li~~~~~i~~~~~~~~~~~~Q~aa~~-aL~---~~~~~~~~~~~y~~rrd~l~~~L~~~G~ 325 (411)
T PRK06290 251 KAYNMTGWRLAFVAGNE-LIVKAFAAVKDNTDSGQFIAIQKAGIY-CLR---HPEITEKTRAKYERRLDKMVKILKEVGF 325 (411)
T ss_pred CCCCCCEEEEEEEECCH-HHHHHHHHHHHHCCCCCHHHHHHHHHH-HHC---CHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 46787224589886699-999999999974647614999999999-955---9899999999999999999999997798
Q ss_pred CCCCCCCCCCEEEECCCCC---CC---CHHH-HHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHH
Q ss_conf 2334588898126316655---67---6799-999888567188037899899998889851224666730799989999
Q gi|254780349|r 313 DIVSGGTDNHLMLVDLRSK---RM---TGKR-AESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFE 385 (433)
Q Consensus 313 ~vv~ggTd~H~vlvdl~~~---~~---~G~~-a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~ 385 (433)
++.. -.-.-.+|+|+... +. +..+ +.+.|+++|+.+ +||+.-. +=+||.-. ...++++
T Consensus 326 ~~~~-P~GafY~~~~ip~~~~~~~~~~~~~efa~~LLee~~Vav----vPG~~fG----~yvRis~~------~~~e~le 390 (411)
T PRK06290 326 NAKM-PGGTFYLYVKAPKGTKSGIKFANAEEFSQYLIKEKLIST----VPWDDAG----HFLRMSVT------FEAKSIE 390 (411)
T ss_pred EECC-CCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCEEE----ECCCCCC----CEEEEEEE------CCHHHHH
T ss_conf 5068-875369968787766577766899999999998489999----5655153----55999983------8899999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999996
Q gi|254780349|r 386 YIGELIAQIL 395 (433)
Q Consensus 386 ~iA~li~~~L 395 (433)
+..+.|.++.
T Consensus 391 ea~~rl~~~~ 400 (411)
T PRK06290 391 EEDRILNEVK 400 (411)
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
No 141
>PRK07049 methionine gamma-lyase; Validated
Probab=99.58 E-value=2.8e-13 Score=112.94 Aligned_cols=250 Identities=18% Similarity=0.202 Sum_probs=162.4
Q ss_pred CCCCCCCCCCHHHHHHHHC--CCCCC------CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHH
Q ss_conf 8104301029899998305--10288------657988875336006799999999999998718863010000167999
Q gi|254780349|r 37 QLIASENIVSRAVLEAQGS--ILTNK------YAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMN 108 (433)
Q Consensus 37 ~LiASEN~~S~~v~~~l~S--~l~nk------yaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An 108 (433)
+...|..|.-+.+.++-.- ...+| -..||-=.|+ |+--.+.+| ++...|-|++.+-+-+ ||..|-
T Consensus 39 PIy~sstf~f~~~~~~~~~f~~~~g~~~~~~g~~~g~~YsR~--~NPT~~~lE----~~iA~LEg~~~a~~~s-SGmaAi 111 (427)
T PRK07049 39 PVFLTSTFVFRSAEDGRDFFDFVSGRKEPPAGEGAGLVYSRF--NHPNSEIVE----DRLAVYEGAEAAALFS-SGMSAI 111 (427)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCC--CCHHHHHHH----HHHHHHCCCCCEEEEC-CHHHHH
T ss_conf 801788860388899998752210223455577589414289--887799999----9999980998489934-699999
Q ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH----CCCEEEEECCCC
Q ss_conf 9999983154874881233448411147665433333220136658323565989999999860----466789705524
Q gi|254780349|r 109 QGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEY----NPKLIIVGGTAY 184 (433)
Q Consensus 109 ~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~----kPklIi~G~S~y 184 (433)
.++++++++|||+|+..+--.||-..--. ..+...+.+.+.| +| ..|.+.+++.+.+. +.|+|++..-..
T Consensus 112 ~~~ll~ll~~Gd~iv~~~~~YggT~~l~~-~~l~~~GI~~~~~-~d----~~d~~~~~~~i~~~~~~~~Tklv~~EspsN 185 (427)
T PRK07049 112 ATTLLAFVRPGDVIVHSQPLYGGTETLLA-KTFRNFGVGAVGF-AD----GVSEAAIEAAAEAAAAKGRVSLIYIETPAN 185 (427)
T ss_pred HHHHHHHCCCCCEEEECCCCCHHHHHHHH-HHHHHCCCEEEEE-EC----CCCHHHHHHHHHHHCCCCCEEEEEEECCCC
T ss_conf 99999851899999989998278999999-9999759889997-08----999999999998621478706999978999
Q ss_pred C--CCCCHHHHHHHHHHCCC------EEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCCCCCCCCC---CEEEEECCCC
Q ss_conf 3--53637999988641797------899186201244320001232200-2356740456522567---4489833620
Q gi|254780349|r 185 S--RVWDWERFRSIADSIGA------YLMADISHISGLVVGGQHPSPVPH-CHIVTTTTHKSLRGPR---GGLIMTNHAD 252 (433)
Q Consensus 185 ~--~~~d~~~l~eIa~~~ga------~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKtl~GPr---gGiI~~~~~e 252 (433)
| ...|++.+++||++.|+ .+++|..- |+..+++|+++ ||||..|+.|-+.|-- ||.|..++ +
T Consensus 186 P~l~v~Di~~ia~ia~~~g~~~~~~i~~vvDNT~-----atP~~~~Pl~~GaDivvhS~TKyl~GHsDvl~G~v~~~~-~ 259 (427)
T PRK07049 186 PTNALVDVAAVRRVADAIEARQGHRPIIACDNTL-----LGPVFQKPLEHGADLSVYSLTKYVGGHSDLVAGAVLGRK-A 259 (427)
T ss_pred CCCCCCCHHHHHHHHHHHCHHCCCCCEEEEECCC-----CCCCCCCCHHHCCCEEEEECCCEECCCCCCCCCEEECCH-H
T ss_conf 8772658899999999844201478769997886-----232136815428988999636142488775135164679-9
Q ss_pred HHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 56501664654322344556668999999997356489999999988899999986168
Q gi|254780349|r 253 LAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLG 311 (433)
Q Consensus 253 ~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G 311 (433)
+.+++..-- ...|+. ++-..+-. .++- ++ -...-.++-.+||..+|+.|.++-
T Consensus 260 ~~~~l~~~~--~~~G~~-~sP~~a~L-~lrG-L~-TL~lRm~r~~~nA~~vA~~L~~hp 312 (427)
T PRK07049 260 LVRQVRALR--GAIGTQ-LDPHSCWM-LGRS-LE-TLVLRMERANRNARAVAEFLRDHP 312 (427)
T ss_pred HHHHHHHHH--HHHCCC-CCCHHHHH-HHCC-CC-CHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999987--531477-89067788-8636-88-699999999999999999998489
No 142
>PRK07543 consensus
Probab=99.58 E-value=5.7e-12 Score=103.84 Aligned_cols=339 Identities=13% Similarity=0.114 Sum_probs=199.7
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHH-H---HHCCCCCCCC-CC-CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 77646978589999999999999-9---8388810430-10-29899998305102886579888753360067999999
Q gi|254780349|r 9 FFQQSLIESDPDVFSLIGQESCR-Q---NDEIQLIASE-NI-VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIEN 82 (433)
Q Consensus 9 ~~~~~l~~~Dpei~~~i~~e~~r-q---~~~l~LiASE-N~-~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~ 82 (433)
++.+.+....|.+...|.++..+ + ++-|+|--.+ ++ +++.+++++...+.+.- -| |.-..-+.++-+
T Consensus 3 ~~~~r~~~~~~~~~~~i~~~~~~~~~~G~dii~l~~G~pdf~~p~~i~~a~~~al~~~~-~~------Y~~~~G~~eLR~ 75 (400)
T PRK07543 3 FLADALSRVKPSATIAVTQKARELKAAGRDVIGLGAGEPDFDTPDNIKQAAIAAINAGK-TK------YTAVDGIPELKQ 75 (400)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CC------CCCCCCHHHHHH
T ss_conf 68899874894599999999999997799807899979999979999999999984599-98------989988099999
Q ss_pred HHHHHHHHHCCCCC--EECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-C
Q ss_conf 99999998718863--0100001679-999999983154874881233448411147665433333220136658323-5
Q gi|254780349|r 83 IAIERAKKLFNVNF--VNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-G 158 (433)
Q Consensus 83 la~~~a~~lF~a~~--anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~ 158 (433)
-..+..++-||.+. -||-..+|+. |...++.++++|||+|+..+...-.+.. .. .....+.++++.+.++ .
T Consensus 76 aia~~~~~~~g~~~~pd~V~vt~G~~~al~~~~~al~~pGD~Vlv~~P~Y~~y~~---~~--~~~g~~~v~v~~~~e~~~ 150 (400)
T PRK07543 76 AICAKFKRENGLDYKPEQVIVGTGGKQILYNALMATLNPGDEVIIPAPYWVSYPE---MV--ALAGGTPVFVETTAEFGF 150 (400)
T ss_pred HHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHH---HH--HHHCCEEEEEECCCCCCC
T ss_conf 9999999984899880428992782699999999857999989982786655368---99--980883599524633375
Q ss_pred CCCHHHHHHHHHHHCCCEEEEECCCCC--CC---CCHHHHHHHHHHC-CCEEEECCCCHHHHHHHH-CCCCCCCCC----
Q ss_conf 659899999998604667897055243--53---6379999886417-978991862012443200-012322002----
Q gi|254780349|r 159 LLDMHEIESLAIEYNPKLIIVGGTAYS--RV---WDWERFRSIADSI-GAYLMADISHISGLVVGG-QHPSPVPHC---- 227 (433)
Q Consensus 159 ~ID~d~~~~~a~~~kPklIi~G~S~y~--~~---~d~~~l~eIa~~~-ga~l~~D~aH~~GLIa~g-~~~~Pl~~A---- 227 (433)
.+|.|++++.+ ..++|++++.....| .. -+++++.++|.+. +.+++.|..| ..|+-.| .|.+|....
T Consensus 151 ~~d~~~le~~i-~~~~k~iil~~P~NPTG~v~s~~~l~~l~~~~~~~~~v~iisDEiY-~~l~~~~~~~~~~~~~~p~~~ 228 (400)
T PRK07543 151 KLTPEALEAAI-TPKTKWFIFNSPSNPTGAAYTRAELKALTDVLVKHPHVWVLTDDMY-EHLVYDDFVFTTPAQVEPSLY 228 (400)
T ss_pred CCCHHHHHHHC-CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCHHHH-HHHHCCCCCCCCHHHCCHHHH
T ss_conf 43847789747-8667199987998988837641678999998887538603131245-664148978899678290221
Q ss_pred C--EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Q ss_conf 3--5674045652--25674489833620565016646543223445566689999999973564899999999888999
Q gi|254780349|r 228 H--IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQAL 303 (433)
Q Consensus 228 D--vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~L 303 (433)
| |+..|.-|+| +|=|-|.+...+ ++.+++.+-.--...+.+...+.|+.+ +|.. .+....+..+..-++...+
T Consensus 229 ~~~i~~~s~SK~~~~~G~RiG~~~~p~-~li~~~~~~~~~~~~~~~~~~Q~aa~~-al~~-~~~~~~~~~~~~~~rrd~~ 305 (400)
T PRK07543 229 DRTLTMNGVSKAYAMTGWRIGYAAGPA-ELIKAMDTIQSQSTSNPCSIAQWAAVE-ALNG-PQDFIPANKKIFQERRDLV 305 (400)
T ss_pred CCCCCCCCCCHHCCCCCCCEEEEECCH-HHHHHHHHHHHHHCCCCCHHHHHHHHH-HHHC-CHHHHHHHHHHHHHHHHHH
T ss_conf 034203774052068343048886789-999999999975046766099999999-9858-5999999999999999999
Q ss_pred HHHHHHC-CCCCCCCCCCCCEEEECCCCC-------C--C-CHH-HHHHHHHHCCEEEECCCCCCCCCCCC-CCCCCCCC
Q ss_conf 9998616-852334588898126316655-------6--7-679-99998885671880378998999988-89851224
Q gi|254780349|r 304 AKKLQFL-GFDIVSGGTDNHLMLVDLRSK-------R--M-TGK-RAESILGRVSITCNKNSIPFDPESPF-ITSGIRLG 370 (433)
Q Consensus 304 a~~L~~~-G~~vv~ggTd~H~vlvdl~~~-------~--~-~G~-~a~~~Le~~gI~~Nkn~iP~D~~~~~-~~sGiRlG 370 (433)
.+.|.+. |+.+.. -.-+-.+|+|++.. + + +.. -+.+.|++.||.+. ||. .| ...++||.
T Consensus 306 ~~~L~~~~g~~~~~-P~g~fy~~~~~~~~~~~~~p~~~~~~~~~~f~~~ll~~~gV~v~----PG~---~FG~~~~~Ri~ 377 (400)
T PRK07543 306 VSMLNQAKGIDCPT-PEGAFYVYPSCAGLIGKTTPSGKVIETDEDFVTELLETEGVAVV----HGS---AFGLGPNFRIS 377 (400)
T ss_pred HHHHHHCCCCCCCC-CCEEEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEE----CCC---CCCCCCCEEEE
T ss_conf 99998677984679-98668982110323200375567679999999999984999998----470---10899998999
Q ss_pred CH
Q ss_conf 66
Q gi|254780349|r 371 TP 372 (433)
Q Consensus 371 T~ 372 (433)
-.
T Consensus 378 ~a 379 (400)
T PRK07543 378 YA 379 (400)
T ss_pred EC
T ss_conf 75
No 143
>PRK12414 putative aminotransferase; Provisional
Probab=99.58 E-value=1.8e-12 Score=107.28 Aligned_cols=331 Identities=17% Similarity=0.236 Sum_probs=203.2
Q ss_pred HHHHCHHHHHHHHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 978589999999999999983888104301--029899998305102886579888753360067999999999999987
Q gi|254780349|r 14 LIESDPDVFSLIGQESCRQNDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKL 91 (433)
Q Consensus 14 l~~~Dpei~~~i~~e~~rq~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~l 91 (433)
|...-+.+...+.+ ...|.+.|+|-..|= -++|.+.++..-.+.+-. ..|.-..-..++-+...+..++.
T Consensus 11 ~~~~~~~~~~~~~~-~a~~~dvI~l~~G~Pd~~~p~~i~~a~~~a~~~~~-------~~Y~~~~G~~~LReaia~~~~~~ 82 (384)
T PRK12414 11 LPDVGTTIFTVIGQ-LAAQHDALNLSQGAPNFAPDPALVEGVARAMRDGH-------NQYAPMAGIAALREALAEKTERL 82 (384)
T ss_pred CCCCCCCHHHHHHH-HHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCC-------CCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 78999988999999-97389968818989999998999999999996199-------98989987199999999999999
Q ss_pred CCCCC--E-ECCCHHHH-HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 18863--0-10000167-99999999831548748812334484111476654333332201366583235659899999
Q gi|254780349|r 92 FNVNF--V-NVQSHSGS-QMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIES 167 (433)
Q Consensus 92 F~a~~--a-nvqp~SG~-~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~ 167 (433)
+|.++ . +|-..+|. .|...++.+|++|||.|+..+...-++. ..+...+-+.+++++++++..+|++++++
T Consensus 83 ~g~~~dp~~~i~vt~G~~~al~~~~~al~~pGD~Vlv~~P~y~~y~-----~~~~~~Ga~~v~v~~~~~~~~~d~~~l~~ 157 (384)
T PRK12414 83 YGARYDPDTEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYA-----PIVRLQGATPVAIKLSPEHFRVNWDEVAA 157 (384)
T ss_pred HCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHH-----HHHHHCCCEEEEEECCCCCCCCCHHHHHH
T ss_conf 6899998880998479899999999996799998999089706569-----99998599899986685568889999996
Q ss_pred HHHHHCCCEEEEECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHC-CCCCCCC---CC--EEEECCCC
Q ss_conf 998604667897055243-----5363799998864179789918620124432000-1232200---23--56740456
Q gi|254780349|r 168 LAIEYNPKLIIVGGTAYS-----RVWDWERFRSIADSIGAYLMADISHISGLVVGGQ-HPSPVPH---CH--IVTTTTHK 236 (433)
Q Consensus 168 ~a~~~kPklIi~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~-~~~Pl~~---AD--vvt~sTHK 236 (433)
.+ ..|.|+|++-....| -.-+++++.++|.+.|.+++.|..+ ..|+-.|. +++...+ .| |+.+|.-|
T Consensus 158 ~~-~~~tk~iil~~P~NPTG~v~s~e~l~~l~~la~~~~i~ii~DE~Y-~~l~f~g~~~~s~~~~~~~~~~~I~i~S~SK 235 (384)
T PRK12414 158 AI-TPRTRMIIVNTPHNPTATVFSEADLARLAQLTRGTDIVVLSDEVY-EHVVFDGARHHSMARHRELAERSVIVSSFGK 235 (384)
T ss_pred HC-CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCH-HHEECCCCCCCCHHHCCCCCCCCCCCCCCCC
T ss_conf 27-778669997999898771375666999999875158899966632-3303178777664315120113323567750
Q ss_pred CC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 52--2567448983362056501664654322344556668999999997356489999999988899999986168523
Q gi|254780349|r 237 SL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDI 314 (433)
Q Consensus 237 tl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~v 314 (433)
+| +|=|-|.++... ++.+++.+.---...+.+..-+.|+ +.++.+ ...+.+..+...++...|.+.|.+.++.+
T Consensus 236 ~~~~~G~RvG~~v~p~-~li~~~~~~~~~~~~~~~~~~Q~a~-~~~l~~--~~~~~~~~~~y~~rrd~l~~~L~~~~~~~ 311 (384)
T PRK12414 236 SYHVTGWRVGYCLAPA-ELMDEIRKVHQFMVFSADTPMQYAF-AEALAR--PASYLGLSAFYQRKRDLLARELADSRFEL 311 (384)
T ss_pred CCCCCCCEEEEEEECH-HHHHHHHHHHHHCCCCCCHHHHHHH-HHHHHC--CHHHHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 0002651279998489-9999999999756578678999999-999829--82499999999999999999767569878
Q ss_pred CC-CCCCCCEEEECCCCCC--CCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCC-----CCCCCH
Q ss_conf 34-5888981263166556--7679999988856718803789989999888985-----122466
Q gi|254780349|r 315 VS-GGTDNHLMLVDLRSKR--MTGKRAESILGRVSITCNKNSIPFDPESPFITSG-----IRLGTP 372 (433)
Q Consensus 315 v~-ggTd~H~vlvdl~~~~--~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sG-----iRlGT~ 372 (433)
.. +| ...+|+++.... .+..-+.+.|+++|+.+- ||. .|-+.| |||.-.
T Consensus 312 ~~p~G--~fy~~~~~~~~~~~~d~~~~~~ll~e~gV~vv----PG~---~Fg~~g~~~g~iRlsfa 368 (384)
T PRK12414 312 LPSEG--SFFMLARFRHFSDESDSDFVLRLIRDARVATI----PLS---AFYADGTDTGVIRLSFS 368 (384)
T ss_pred ECCCC--EEEEEEECCCCCCCCHHHHHHHHHHHCCEEEE----ECH---HHCCCCCCCCEEEEEEC
T ss_conf 78980--79999976878999999999999985999998----263---21799998998999967
No 144
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.57 E-value=5.8e-12 Score=103.79 Aligned_cols=319 Identities=15% Similarity=0.124 Sum_probs=207.1
Q ss_pred CCCCCCCCCC--CCHHHHHHHHCCCC--CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH-HHH
Q ss_conf 8881043010--29899998305102--886579888753360067999999999999987188630100001679-999
Q gi|254780349|r 35 EIQLIASENI--VSRAVLEAQGSILT--NKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQ-MNQ 109 (433)
Q Consensus 35 ~l~LiASEN~--~S~~v~~~l~S~l~--nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~-An~ 109 (433)
-+-|-+.||. +||.|++++...+. ||| |.. ++.+- ++...+.+|.+.-+|=.-.|+. .-.
T Consensus 35 ~ikL~sNENP~gpsp~v~~Ai~~~~~~~~rY----Pd~------~~~~L-----r~~lA~~~gv~~e~I~~gnGSdeli~ 99 (370)
T PRK08153 35 RARIGANESGFGPSPSVIAAMREAAAEVWKY----GDP------ENHDL-----RHALAAHHGVAPENIMVGEGIDGLLG 99 (370)
T ss_pred CEEECCCCCCCCCCHHHHHHHHHHHHHCCCC----CCC------CHHHH-----HHHHHHHHCCCHHHEEEECCHHHHHH
T ss_conf 7786899999898999999999768645679----997------78999-----99999986878667998088899999
Q ss_pred HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CC
Q ss_conf 9999831548748812334484111476654333332201366583235659899999998604667897055243--53
Q gi|254780349|r 110 GVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RV 187 (433)
Q Consensus 110 av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~ 187 (433)
.++.++++|||+|+......... .......|-....+++ ..+ ..|.+.+.+.+...++|||++.....| ..
T Consensus 100 ~~~~a~~~~g~~vv~~~p~y~~y---~~~~~~~g~~~~~vp~--~~~--~~d~~~~l~~~~~~~~klv~l~nPNNPTG~~ 172 (370)
T PRK08153 100 LIVRLYVEPGDAVVTSLGAYPTF---NYHVAGFGGRLVTVPY--RDD--HEDLDALLDAARRENAPLVYLANPDNPMGSW 172 (370)
T ss_pred HHHHHHHCCCCCCCCCCCCCCHH---HHHHHHHCCEEEEEEC--CCC--CCCHHHHHHHCCCCCCCEEEECCCCCCCCCC
T ss_conf 99999855999234378875169---9999981966999944--565--4486999986037897389976895985776
Q ss_pred CCHHHHHHHHHHC--CCEEEECCCCHHHHHHHHCCCCCC-CCCC-EEEECCCCC--CCCCCCEEEEECCCCHHHHCCHHH
Q ss_conf 6379999886417--978991862012443200012322-0023-567404565--225674489833620565016646
Q gi|254780349|r 188 WDWERFRSIADSI--GAYLMADISHISGLVVGGQHPSPV-PHCH-IVTTTTHKS--LRGPRGGLIMTNHADLAKKINSAI 261 (433)
Q Consensus 188 ~d~~~l~eIa~~~--ga~l~~D~aH~~GLIa~g~~~~Pl-~~AD-vvt~sTHKt--l~GPrgGiI~~~~~e~~~~i~~av 261 (433)
++-+++.++++.+ ++++++|.|= .-+.-...+++-. .+-+ ||+-|.-|. |.|=|=|..+++ +++.+.+++.-
T Consensus 173 ~~~~~l~~l~~~~~~~~lvVvDEAY-~ef~~~~~~~~l~~~~~NliVlRTfSK~ygLAGlRlGY~ia~-~~li~~l~k~r 250 (370)
T PRK08153 173 HPAADIVAFIEALPETTLLVLDEAY-CETAPASAAPPIDPDDPNVIRMRTFSKAYGLAGARVGYAIGT-PGTIKAFDKVR 250 (370)
T ss_pred CCHHHHHHHHHHCCCCCEEEEEHHH-HHHCCCCCHHHHHHCCCCEEEEEECCHHCCCCCCCCCCCCCC-HHHHHHHHHHC
T ss_conf 7868899999847777389621535-643564217788743998899982622037888743201389-99999999864
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHH
Q ss_conf 54322344556668999999997356489999999988899999986168523345888981263166556767999998
Q gi|254780349|r 262 FPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAESI 341 (433)
Q Consensus 262 fPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~ 341 (433)
-|. ..|.+|..|....-.-+...+...+++.+.-+.|.+.|...|++++. +++.-+|+++...+....+..+.
T Consensus 251 ~p~-----~vn~~aq~aa~aaL~d~~~~~~~~~~i~~~R~~l~~~l~~~g~~~~p--S~aNFil~~~~~~~~~a~~l~~~ 323 (370)
T PRK08153 251 NHF-----GMNRIAQAAALAALKDQAYLAEVVAKIAAARDRIAAIARANGLTPLP--SATNFVAIDCGRDGAFARAVLDG 323 (370)
T ss_pred CCC-----CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC--CCCCEEEEECCCCHHHHHHHHHH
T ss_conf 898-----87799999999997799999999999999999999999868584799--97877999848974699999999
Q ss_pred HHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 88567188037899899998889851224666730799989999999999999602
Q gi|254780349|r 342 LGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 342 Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
|.+.||++-...-|+ .+..|||..- .++||+.+-+-+.++|+.
T Consensus 324 L~~~GIlVR~~~~~~------l~~~lRIsiG-------t~een~~~l~aL~eiLk~ 366 (370)
T PRK08153 324 LIARDIFVRMPGVAP------LDRCIRVSVG-------PEEELDLFAEALPEALKA 366 (370)
T ss_pred HHHCCEEECCCCCCC------CCCEEEEECC-------CHHHHHHHHHHHHHHHHH
T ss_conf 997891994499888------9998999739-------999999999999999998
No 145
>PRK05939 hypothetical protein; Provisional
Probab=99.57 E-value=2.7e-13 Score=113.05 Aligned_cols=250 Identities=17% Similarity=0.173 Sum_probs=157.0
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00679999999999999871886301000016799999999831548748812334484111476654333332201366
Q gi|254780349|r 73 GCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 73 G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
|+--.+.+| ++...|-+++.|-+-+ ||..|-.++++++++|||+|+..+.-.||-..--. .+...+.++..+
T Consensus 44 ~nPT~~~le----~~la~LEgg~~a~~~s-SGMaAi~~~l~~ll~~Gd~il~~~~~YG~t~~l~~--~l~~~GI~v~~v- 115 (396)
T PRK05939 44 GTPTTAALE----AKITEMEGGVGTVCFA-TGMAAIAAVFLTLLRAGDHLVSSQYLFGNTNSLLG--TLQGLGVEVTMV- 115 (396)
T ss_pred CCHHHHHHH----HHHHHHHCCCEEEEEC-CHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHH--HHHHCCEEEEEE-
T ss_conf 986799999----9999982997499965-79999999999835889889953886922999999--865318699998-
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCE
Q ss_conf 583235659899999998604667897055243--53637999988641797899186201244320001232200-235
Q gi|254780349|r 153 VRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHI 229 (433)
Q Consensus 153 ~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADv 229 (433)
|. -|.+++++.+ +.+.|+|++...+.| +..|++++++||++.|+.+++|.. .|+..+++|+++ |||
T Consensus 116 -d~----~d~~~~~~ai-~~~Tklv~~EspsNP~l~v~Di~~i~~ia~~~g~~~vVDNT-----~atP~~~~Pl~~GaDi 184 (396)
T PRK05939 116 -DA----TDVQQVAAAI-RPNTRMVFVETIANPGTQVADLAGIGALCRERGLVYVVDNT-----MTSPWLFRPKSVGASL 184 (396)
T ss_pred -CC----CCHHHHHHHH-CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECC-----CCHHHHCCHHHHCCCE
T ss_conf -89----7989999861-85661899980899987075899999999983997999777-----6304205855638988
Q ss_pred EEECCCCCCCCCC---CEEEEECCCCHHHHCCHHHCHHHHH-------------------HHHHHHHHHHHHHHHHHHCH
Q ss_conf 6740456522567---4489833620565016646543223-------------------44556668999999997356
Q gi|254780349|r 230 VTTTTHKSLRGPR---GGLIMTNHADLAKKINSAIFPGLQG-------------------GPFMHSIAAKAVAFGEALSS 287 (433)
Q Consensus 230 vt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~avfPg~qg-------------------~~~~~~iaa~aval~Ea~~~ 287 (433)
|..|+.|-+.|-- ||.|..+...-+.+. ..+++.... |..++-..+-.+ ++- + .
T Consensus 185 vvhS~TKyi~GhsD~l~G~vv~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~r~lG~~l~p~~a~l~-~rG-L-~ 260 (396)
T PRK05939 185 VINSLSKYIAGHGNALGGAVTDTGLFDWSGY-PNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRI-AIG-A-E 260 (396)
T ss_pred EEEECCCCCCCCCCEEEEEEECCCCCCHHHC-CHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH-HCC-C-C
T ss_conf 9983433025887747699965763203323-1132454155287766899998888852787898999999-826-6-6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCC---------------CCEEEECCCCCCCCHHHHHHHHHHCCEEE
Q ss_conf 4899999999888999999861685--23345888---------------98126316655676799999888567188
Q gi|254780349|r 288 EFRDYAKQIVLNSQALAKKLQFLGF--DIVSGGTD---------------NHLMLVDLRSKRMTGKRAESILGRVSITC 349 (433)
Q Consensus 288 ~f~~Ya~qvv~NA~~La~~L~~~G~--~vv~ggTd---------------~H~vlvdl~~~~~~G~~a~~~Le~~gI~~ 349 (433)
-...-.+|..+||..+|+.|.++.. +|..-|-. .-++-++++ ++..+.+.+++..+..
T Consensus 261 TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~~~~a~~~~~g~gg~~sf~l~----~~~~~~~f~~~l~l~~ 335 (396)
T PRK05939 261 TLALRMDRSCSNALALATFLEGHPAVARVYYPGLASHPQHARATELFGAYGGLLSFELA----DGIDCFDFLNRLKLVI 335 (396)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEC----CHHHHHHHHHHCCCCE
T ss_conf 18899999998899999998639995789899999994499999866488637999966----8899999998087246
No 146
>PRK09105 putative aminotransferase; Provisional
Probab=99.57 E-value=5.9e-12 Score=103.76 Aligned_cols=311 Identities=18% Similarity=0.204 Sum_probs=203.3
Q ss_pred HHCCCCCCCCCC--CCHHHHHHHHCCCC--CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHH-
Q ss_conf 838881043010--29899998305102--8865798887533600679999999999999871886301000016799-
Q gi|254780349|r 33 NDEIQLIASENI--VSRAVLEAQGSILT--NKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQM- 107 (433)
Q Consensus 33 ~~~l~LiASEN~--~S~~v~~~l~S~l~--nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~A- 107 (433)
+..|-|-+.||. +||.|++++...+. |||- .. +..+- ++...+.+|.+--+|-.-+|+.-
T Consensus 46 ~g~ikL~sNENP~Gpsp~v~~Ai~~~~~~~~rYP----d~------~~~~L-----r~~lA~~~gv~~~~I~~gnGSdE~ 110 (374)
T PRK09105 46 EGAVFLNFNENPLGPSAAARAAAARSAALSGRYL----FE------MQDEL-----RTLFAAQLGLPVDHLHAYAGSSEP 110 (374)
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC----CC------CHHHH-----HHHHHHHHCCCHHHEEEECCHHHH
T ss_conf 9997845888888989999999997652457798----98------68999-----999999978590249993699999
Q ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--
Q ss_conf 999999831548748812334484111476654333332201366583235659899999998604667897055243--
Q gi|254780349|r 108 NQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS-- 185 (433)
Q Consensus 108 n~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~-- 185 (433)
-..++.++++|||.|+..+...+-+- ......| .+++..++++ ++.+|.+++.+. ..++|+|++.....|
T Consensus 111 i~~l~~af~~~g~~vv~~~Ptf~~Y~---~~a~~~g--~~v~~vpl~~-d~~~dl~~l~~~--~~~tklv~l~nPNNPTG 182 (374)
T PRK09105 111 LNYAVLAFTSPEAGLVTADPTYEAGW---RAADAQG--AKVIKVPLRA-DGAHDVRAMLAA--DPNAGLIYICNPNNPTG 182 (374)
T ss_pred HHHHHHHHHCCCCEEEECCCCHHHHH---HHHHHCC--CEEEEEEECC-CCCCCHHHHHHC--CCCCCEEEECCCCCCCC
T ss_conf 99999998079986895888779999---9999829--7799986165-558586889735--78987899788999987
Q ss_pred CCCCHHHHHHHHHHC--CCEEEECCCCHHHHHHHHCCCCCCC----CCCE-EEECCCCC--CCCCCCEEEEECCCCHHHH
Q ss_conf 536379999886417--9789918620124432000123220----0235-67404565--2256744898336205650
Q gi|254780349|r 186 RVWDWERFRSIADSI--GAYLMADISHISGLVVGGQHPSPVP----HCHI-VTTTTHKS--LRGPRGGLIMTNHADLAKK 256 (433)
Q Consensus 186 ~~~d~~~l~eIa~~~--ga~l~~D~aH~~GLIa~g~~~~Pl~----~ADv-vt~sTHKt--l~GPrgGiI~~~~~e~~~~ 256 (433)
..++-+++.+++... ++++++|.|-+ -+. ..++-++ +-++ |+-|.-|. |.|=|=|..+.+. ++.++
T Consensus 183 ~~~~~~el~~~~~~~~~~~lvvvDEAY~-ef~---~~~s~~~l~~~~~NvivlRTfSKaygLAGlRvGY~ia~~-~li~~ 257 (374)
T PRK09105 183 SVTPRADIEWLLAHKPAGSVVLVDEAYI-HFS---DAPSVVDLVAQRKDVVVLRTFSKLYGMAGMRLGLAAARP-DLLAK 257 (374)
T ss_pred CCCCHHHHHHHHHHCCCCCEEEEEHHHH-HHC---CCCCCHHHHHCCCCEEEEEHHHHHHCCCCCCCCHHHCCH-HHHHH
T ss_conf 6579999999997189881899862676-625---786432567428988998222376266510022310899-99999
Q ss_pred CCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCH
Q ss_conf 166465432234455666899999999735648-9999999988899999986168523345888981263166556767
Q gi|254780349|r 257 INSAIFPGLQGGPFMHSIAAKAVAFGEALSSEF-RDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTG 335 (433)
Q Consensus 257 i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f-~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G 335 (433)
+.+ ++ .++......+-|++..+ ..+| +...+++.+.-+.|.+.|.+.|++++. ++..-+|+++. .++
T Consensus 258 l~~--~~---~~~~~~~a~aaa~aaL~--d~~~~~~~~~~~~~~R~~l~~~L~~~g~~~~p--S~aNFil~~~~---~~a 325 (374)
T PRK09105 258 LAR--FG---GNPLPVPAAAAGLASLR--DPKLVPQRRAQNAAVREDTIAWLRKQGYACTP--SQANCFMVDVK---RPA 325 (374)
T ss_pred HHH--CC---CCCCCHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC--CCCCEEEEECC---CCH
T ss_conf 973--58---89887999999999962--99999999999999999999999978395899--87857999559---999
Q ss_pred HHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 99999888567188037899899998889851224666730799989999999999999602
Q gi|254780349|r 336 KRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 336 ~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
.+..+.|.+.||++-+. .| ..+..|||..- .++||+.+-+-+.++|++
T Consensus 326 ~~~~~~L~~~gIlV~r~-~~------~~~~~lRISiG-------t~een~~fl~AL~evL~g 373 (374)
T PRK09105 326 EVFADAMAKQGVFIGRS-WP------IWPNWVRVTVG-------TEEEMAAFRSAFAKVMRG 373 (374)
T ss_pred HHHHHHHHHCCEEEECC-CC------CCCCEEEEECC-------CHHHHHHHHHHHHHHHCC
T ss_conf 99999999699799379-99------88997999469-------999999999999998668
No 147
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.56 E-value=3.4e-12 Score=105.44 Aligned_cols=336 Identities=19% Similarity=0.225 Sum_probs=216.6
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH-HHHHHHHH----
Q ss_conf 4301029899998305102886579888753360067999999999999987188630100001679-99999998----
Q gi|254780349|r 40 ASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQ-MNQGVFLA---- 114 (433)
Q Consensus 40 ASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~-An~av~~A---- 114 (433)
++...+.|.|++++-..++..| |-|-.-+.-|.+ ..++-+-|.+...++.|++.-++=-.||.. +|-.++.+
T Consensus 8 ~ATTp~~~~v~~~m~~~~~~~f--gNPsS~H~~G~~-A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a 84 (386)
T COG1104 8 AATTPVDPEVLEAMLPYLTEVF--GNPSSLHSFGRE-ARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALA 84 (386)
T ss_pred CCCCCCCHHHHHHHHHHHHHHC--CCCCCHHHHHHH-HHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHH
T ss_conf 3568898999999999987531--896115575799-9999999999999983999780899569847777999864876
Q ss_pred HHC--CCCEEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEE--CCCCCCCCC
Q ss_conf 315--4874881233448411147665433-33322013665832356598999999986046678970--552435363
Q gi|254780349|r 115 LMH--PGDSFMGLSLDSGGHLTHGSSVNMS-GKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVG--GTAYSRVWD 189 (433)
Q Consensus 115 Ll~--pGD~Il~~~l~~GGHlshg~~~~~~-g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G--~S~y~~~~d 189 (433)
.-+ .|.+|+....+|--=+ ....+. ...|++...++|. +|.||.+++++.++.. .-||-+. -+.....-|
T Consensus 85 ~~~~~~~~HIIts~iEH~aVl---~~~~~Le~~g~~Vtyl~v~~-~G~v~~e~L~~al~~~-T~LVSim~aNnE~G~IQp 159 (386)
T COG1104 85 YRNAQKGKHIITSAIEHPAVL---NTCRYLERQGFEVTYLPVDS-NGLVDLEQLEEALRPD-TILVSIMHANNETGTIQP 159 (386)
T ss_pred HHCCCCCCEEEECCCCCHHHH---HHHHHHHHCCCEEEEECCCC-CCEECHHHHHHHCCCC-CEEEEEEECCCCEEECCC
T ss_conf 423568985887554349999---99999986697579968888-9728799999863888-459999850268201120
Q ss_pred HHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCCCCCCC-EEEEECCC-CHHHHCC-HHHCHH
Q ss_conf 7999988641797899186201244320001232200--23567404565225674-48983362-0565016-646543
Q gi|254780349|r 190 WERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSLRGPRG-GLIMTNHA-DLAKKIN-SAIFPG 264 (433)
Q Consensus 190 ~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl~GPrg-GiI~~~~~-e~~~~i~-~avfPg 264 (433)
++++.+||++.|.++++|+.+..|-| |=+++. +|.++.|-|| |.||+| |.++.++. .+.-.|. -.-.+|
T Consensus 160 I~ei~~i~k~~~i~fHvDAvQa~Gki-----pi~~~~~~vD~ls~SaHK-~~GpkGiGaLyv~~~~~~~p~i~GGgQE~g 233 (386)
T COG1104 160 IAEIGEICKERGILFHVDAVQAVGKI-----PIDLEELGVDLLSFSAHK-FGGPKGIGALYVRPGVRLEPLIHGGGQERG 233 (386)
T ss_pred HHHHHHHHHHCCCEEEEEHHHHCCCE-----ECCCCCCCCCEEEEEHHH-CCCCCCEEEEEECCCCCCCCEEECCCCCCC
T ss_conf 99999999975981797613325760-----046021576568731121-369984279998799873744604767899
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCC---CCCEEEECCCCCCCCHHHHH
Q ss_conf -22344556668999999997356489999999988899999986168523-34588---89812631665567679999
Q gi|254780349|r 265 -LQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDI-VSGGT---DNHLMLVDLRSKRMTGKRAE 339 (433)
Q Consensus 265 -~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~v-v~ggT---d~H~vlvdl~~~~~~G~~a~ 339 (433)
-.|....+.|+|++.|+.++.+ ++.....++.+--..|.+.|.+..-.+ +.|.. --|.+.+-+ .++.|....
T Consensus 234 ~RsGTenv~~Ivg~~~A~~~a~~-~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f--~gv~gE~ll 310 (386)
T COG1104 234 LRSGTENVPGIVGFGKAAEIAVE-ELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSF--PGVEGESLL 310 (386)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEE--CCCCHHHHH
T ss_conf 78887557999999999999998-778889999999999999998509968986885457898689996--897578999
Q ss_pred HHHHHCCEEEECCC--CCCCCCC-----------CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 98885671880378--9989999-----------888985122466673079998999999999999960
Q gi|254780349|r 340 SILGRVSITCNKNS--IPFDPES-----------PFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 340 ~~Le~~gI~~Nkn~--iP~D~~~-----------~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
-.|+..||-+.--+ --+..++ ....+.||++-...|| ++|+..+++.+.+++.
T Consensus 311 ~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt----~eei~~~~~~l~~~i~ 376 (386)
T COG1104 311 LALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTT----EEEIDAAAEALKEIIK 376 (386)
T ss_pred HHCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCHHHHCCCEEEECCCCCC----HHHHHHHHHHHHHHHH
T ss_conf 86104086873364345899871499998099968837248997379998----9999999999999999
No 148
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.55 E-value=2e-11 Score=100.12 Aligned_cols=293 Identities=13% Similarity=0.075 Sum_probs=172.9
Q ss_pred HHHHHHHHHHHHHHHCCCCC-E--ECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999999998718863-0--100001679-9999999831548748812334484111476654333332201366
Q gi|254780349|r 77 VDDIENIAIERAKKLFNVNF-V--NVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 77 ~d~iE~la~~~a~~lF~a~~-a--nvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
+-++-+-..+..++.+|.++ . ||-..+|++ |...++.+|++|||.|+..+...=++. ..+...| -+.++++
T Consensus 80 ~~eLReAia~~~~~~~g~~~d~~d~Iivt~G~~~al~~a~~al~~pGDeViv~~P~y~~y~---~~i~~~g--~~~vpv~ 154 (406)
T PRK06207 80 DLEIRELVAARLAEFTGAPVDARDGLIITPGTQGALFLAVASTVTRGDKVAIVQPDYFANR---KLVEFFE--GEIVPVQ 154 (406)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHH---HHHHHCC--CEEEEEE
T ss_conf 2999999999999986899998786998587799999999997589987999789874579---9999829--8799985
Q ss_pred CC-----CCCCCCCHHHHHHHHHHHCCCEEEEECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHH-CCC
Q ss_conf 58-----3235659899999998604667897055243-----536379999886417978991862012443200-012
Q gi|254780349|r 153 VR-----KEDGLLDMHEIESLAIEYNPKLIIVGGTAYS-----RVWDWERFRSIADSIGAYLMADISHISGLVVGG-QHP 221 (433)
Q Consensus 153 ~d-----~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g-~~~ 221 (433)
+| .....+|+|++++.+. .+.|++++.....| -.-.++++.++|+++|.+++.|..|- .|+-.| .++
T Consensus 155 l~~~~~~~~~~~~d~d~le~~i~-~~tk~iil~nP~NPTG~v~s~e~l~~l~~la~~~~i~visDEiY~-~l~ydg~~~~ 232 (406)
T PRK06207 155 LDYVSVDETRAGLDLDQLEAAFK-AGVRVFLFSNPNNPAGVVYSPEEIAQIAALARRYGATVIADQLYS-RLRYAGASYT 232 (406)
T ss_pred CCCCCCCCCCCCCCHHHHHHHCC-CCCEEEEECCCCCCCCHHCCHHHHHHHHHHHHHCCEEEEEECCCC-CCCCCCCCCC
T ss_conf 67767763446899999997454-487699988997985721339999999998755795999964664-5455898877
Q ss_pred CCC--CC-CC--EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 322--00-23--5674045652--25674489833620565016646543223445566689999999973564899999
Q gi|254780349|r 222 SPV--PH-CH--IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAK 294 (433)
Q Consensus 222 ~Pl--~~-AD--vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~ 294 (433)
+.. +. .| |+..|.-||+ +|=|-|.++... ++.+++.+.---...+.+...+.+ ...++.+ ...|..
T Consensus 233 ~~~~~~~~~~~~I~~~s~SK~~~m~G~RlG~~~~~~-~li~~~~~~~~~~~~~~~~~~Q~a-~~~~l~~-----~~~~~~ 305 (406)
T PRK06207 233 HLRALAVDPENVITIMGPSKTESLSGYRLGVAFGSP-AIIARMEKLQAIVSLRAAGYCQAV-LRTWFDE-----PPGWME 305 (406)
T ss_pred CHHHCCCCCCCEEEEEECHHHHHCCCCCEEEEECCH-HHHHHHHHHHHHHCCCCHHHHHHH-HHHHHHC-----CHHHHH
T ss_conf 876635776767997513244312256248897899-999999999988436842999999-9999967-----799999
Q ss_pred HHHH----HHHHHHHHHHHC-CCCCCC-CCCCCCEEEECCCCCCCCHHHHH-HHHHHCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf 9998----889999998616-852334-58889812631665567679999-9888567188037899899998889851
Q gi|254780349|r 295 QIVL----NSQALAKKLQFL-GFDIVS-GGTDNHLMLVDLRSKRMTGKRAE-SILGRVSITCNKNSIPFDPESPFITSGI 367 (433)
Q Consensus 295 qvv~----NA~~La~~L~~~-G~~vv~-ggTd~H~vlvdl~~~~~~G~~a~-~~Le~~gI~~Nkn~iP~D~~~~~~~sGi 367 (433)
+.++ .-..+.+.|... |+.+.. .|+ -.+|+++...+++..+.. ..++++||.+. ||..=.+....-+
T Consensus 306 ~~~~~~~~~R~~l~~~l~~~~g~~~~~P~gg--~yl~~~l~~~~~~~~~f~~~Ll~e~gVav~----PG~~FG~~~~~~v 379 (406)
T PRK06207 306 DRIAQHQAIRDDLIRVLRGIDGVFARAPEAG--SYLFPRLPKLAVGLADFVKILRLQAGVVVT----PGTEFSPHTADSI 379 (406)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCEECCCCCE--EEEEEECCCCCCCHHHHHHHHHHHCCEEEE----CCHHHCCCCCCEE
T ss_conf 9999999999999999850899574589914--899688888899999999999985899998----8656589998979
Q ss_pred CCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 2246667307999899999999999996
Q gi|254780349|r 368 RLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 368 RlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
||+-. ..++.+.+-.+-|.++|
T Consensus 380 Rlsfa------~~~e~l~eal~RL~~~l 401 (406)
T PRK06207 380 RLNFS------QDHAAAVAAVERIAALI 401 (406)
T ss_pred EEEEC------CCHHHHHHHHHHHHHHH
T ss_conf 99973------98999999999999999
No 149
>PRK04152 consensus
Probab=99.55 E-value=1.1e-11 Score=101.88 Aligned_cols=316 Identities=18% Similarity=0.149 Sum_probs=198.9
Q ss_pred HHHCCCCCCCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHH
Q ss_conf 9838881043010--29899998305102886579888753360067999999999999987188630100001679999
Q gi|254780349|r 32 QNDEIQLIASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQ 109 (433)
Q Consensus 32 q~~~l~LiASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~ 109 (433)
.++.|.|=+.||. +||.|++++.+.+..- ++|..-++.+-.+.+| +.+|.+--||-...|+.--+
T Consensus 30 p~~ii~ls~NeNP~g~p~~~~~ai~~~~~~~--------~~YPd~~~~~Lr~~iA-----~~~gv~~~~I~vgnGs~e~i 96 (364)
T PRK04152 30 PKDVIKLASNENPFGTSPKVIEAIRKNASKA--------HLYPDDSMFELKSALA-----SKFDVESENIIIGAGSDQVI 96 (364)
T ss_pred CCCEEEECCCCCCCCCCHHHHHHHHHHHHHC--------CCCCCCCHHHHHHHHH-----HHHCCCHHEEEECCCHHHHH
T ss_conf 1247881799999999999999999878737--------6799967999999999-----98695830099856999999
Q ss_pred -HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--C
Q ss_conf -9999831548748812334484111476654333332201366583235659899999998604667897055243--5
Q gi|254780349|r 110 -GVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--R 186 (433)
Q Consensus 110 -av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~ 186 (433)
.++.++++|||+|+..+...+.+-.. ....| -+++..+.+ .-|++++.+.+...+||+|++.....| .
T Consensus 97 ~~~~~~~~~~g~~vl~~~Ptf~~Y~~~---a~~~g--~~v~~~~~~----~~dl~~~~~~~~~~~~~lv~l~nPNNPTG~ 167 (364)
T PRK04152 97 EFAIHAKLNEKSSVLMAGVTFAMYEIY---AKQCG--AKIYKTQSV----EHDLNEFLELYKSHKPKIIFLCLPNNPLGE 167 (364)
T ss_pred HHHHHHHHCCCCEEEECCCCHHHHHHH---HHHCC--CEEEECCCC----CCCHHHHHHHHHCCCCCEEEECCCCCCCCC
T ss_conf 999999838998446589872689999---99839--879966874----339899999863779858998799998672
Q ss_pred CCCHHHHHHHHHHC--CCEEEECCCCHHHHHHH---HCCCCCCC----CCC-EEEECCCCC--CCCCCCEEEEECCCCHH
Q ss_conf 36379999886417--97899186201244320---00123220----023-567404565--22567448983362056
Q gi|254780349|r 187 VWDWERFRSIADSI--GAYLMADISHISGLVVG---GQHPSPVP----HCH-IVTTTTHKS--LRGPRGGLIMTNHADLA 254 (433)
Q Consensus 187 ~~d~~~l~eIa~~~--ga~l~~D~aH~~GLIa~---g~~~~Pl~----~AD-vvt~sTHKt--l~GPrgGiI~~~~~e~~ 254 (433)
.++-+++.++++.. ++++++|.|-. -+.-. ..+-+|.+ +-+ ||+-|.-|+ |+|=|=|..+.+ +++.
T Consensus 168 ~~~~~~l~~~~~~~~~~~~vvvDEAY~-ef~~~~~~~~~~~~~~l~~~~~nlivlrsfSK~~glaGlRlGy~ia~-~~~i 245 (364)
T PRK04152 168 CLDASEVYKFIKGIDEDTLVVIDAAYM-EFAKFKDSKKHIEPKELIKLFPNVIYLGTFSKAYGLGGMRVGYGIAN-AEII 245 (364)
T ss_pred CCCCCCHHHHHHHCCCCCEEEEEHHHH-HHHHCCCCCCCCCHHHHHHHCCCEEEEECCHHHCCCCCCCCCCCCCC-HHHH
T ss_conf 466512499997545577687416778-88603775345588998742797899832605237877735201389-9999
Q ss_pred HHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHC-HHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCC
Q ss_conf 50166465432234455666899999999735-648-9999999988899999986168523345888981263166556
Q gi|254780349|r 255 KKINSAIFPGLQGGPFMHSIAAKAVAFGEALS-SEF-RDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKR 332 (433)
Q Consensus 255 ~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~-~~f-~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~ 332 (433)
+++++..-| ...+.++..|. .+++. .+| +.+.+++.+..+.+.+.+...|++++. ++..-+|+.+. .+
T Consensus 246 ~~l~k~~~p-----~~vn~~a~~aa--~~aL~~~~~~~~~~~~~~~er~~~~~~~~~~g~~~~p--s~aNFil~~~~-~~ 315 (364)
T PRK04152 246 SALYKLRPP-----FNVTTLSLKAA--IEALKDEEFVEKTLENNFKEMKRYEEFAKEQGIEFID--SYTNFITFFFD-ER 315 (364)
T ss_pred HHHHHHCCC-----CCCCHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC--CCCCEEEEECC-CC
T ss_conf 999985389-----88679999999--9993799999999999999999999998858884899--98878989899-99
Q ss_pred CCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 767999998885671880378998999988898512246667307999899999999999996
Q gi|254780349|r 333 MTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 333 ~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
.++.+..+.|.+.||.+- +.-+ +-..++||.. -.++|++.+-+-+.++|
T Consensus 316 ~~a~~l~~~L~~~gI~VR-~~~~------~g~~~iRIsv-------g~~een~~li~aL~~vL 364 (364)
T PRK04152 316 KNSTEISQKLLKKGIIVR-NLKS------YGLNAIRITI-------GTPEQNDRVFEELDKEL 364 (364)
T ss_pred CCHHHHHHHHHHCCEEEE-ECCC------CCCCEEEEEC-------CCHHHHHHHHHHHHHHC
T ss_conf 999999999996891998-5798------9969799973-------99999999999999759
No 150
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.55 E-value=3e-13 Score=112.78 Aligned_cols=244 Identities=16% Similarity=0.186 Sum_probs=160.2
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC-CCCCCCC
Q ss_conf 006799999999999998718863010000167999999998315487488123344841114766543333-3220136
Q gi|254780349|r 73 GCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGK-WFKAIPY 151 (433)
Q Consensus 73 G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~-~~~~~~y 151 (433)
|+--.+.+| ++..+|=+++++-+-+ ||..|-.+++ +++++||+|+..+--.||-...=. .+..+ .+.+..+
T Consensus 52 ~nPT~~~le----~~la~LE~~~~a~~~s-SGmaAi~~~l-~~l~~Gd~vv~~~~~Yg~t~~~~~--~~~~~~~~~~~~~ 123 (364)
T PRK07269 52 KNPTRATLE----ETLAAIESADYALATS-SGMSAIVLAF-SGFPVGSKVVAVRDLYGGSFRWFN--QQEKEGRFHFTYA 123 (364)
T ss_pred CCHHHHHHH----HHHHHHHCCCCEEECC-CHHHHHHHHH-HHHCCCCEEEECCCEECHHHHHHH--HHHHCCEEEEEEC
T ss_conf 886389999----9999984997445327-6899999999-983689808970460737999999--8874383899968
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CC
Q ss_conf 6583235659899999998604667897055243--53637999988641797899186201244320001232200-23
Q gi|254780349|r 152 NVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CH 228 (433)
Q Consensus 152 ~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-AD 228 (433)
| +-|++++.+ +.++|+|++.....| ...|++++.++|++.|+.+++|.. .|+..+++|+++ ||
T Consensus 124 --~------~~~~~~~~i-~~~Tklv~~EspsNP~l~v~Di~~i~~iA~~~g~~~vvDNT-----~atP~~~~Pl~~GaD 189 (364)
T PRK07269 124 --N------TEEELIAAI-EEDTDIVYIETPTNPLMVEFDIEKVAQLAHAKGAKVIVDNT-----FYSPIYQRPLEDGAD 189 (364)
T ss_pred --C------CHHHHHHHC-CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECC-----CCCCCCCCCCCCCCC
T ss_conf --9------859999744-87853999988999777624779999988756985999788-----643202673235861
Q ss_pred EEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Q ss_conf 56740456522567---448983362056501664654322344556668999999997356489999999988899999
Q gi|254780349|r 229 IVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAK 305 (433)
Q Consensus 229 vvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~ 305 (433)
||..|+.|-+.|-- ||.+.++++++++++....- ..|+ .++-..+-.+ ++- +. -...-.+|-.+||..+|+
T Consensus 190 ivihS~TKYl~GHsDvl~G~vv~~~~~~~~~l~~~~~--~~G~-~~sP~~a~l~-~RG-L~-TL~lR~~~~~~nA~~lA~ 263 (364)
T PRK07269 190 IVLHSATKYLSGHNDVLAGVVVTNDLELYDKLFYNLN--TTGA-VLSPFDSYLL-MRG-LK-TLSLRMERSTANAQEVVA 263 (364)
T ss_pred EEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHH--HCCC-CCCHHHHHHH-HCC-CC-CHHHHHHHHHHHHHHHHH
T ss_conf 8998355001488874016894598899999999998--5488-7894777888-637-77-399999999999999999
Q ss_pred HHHHCC-CCCC-CCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEE
Q ss_conf 986168-5233-4588898126316655676799999888567188
Q gi|254780349|r 306 KLQFLG-FDIV-SGGTDNHLMLVDLRSKRMTGKRAESILGRVSITC 349 (433)
Q Consensus 306 ~L~~~G-~~vv-~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~ 349 (433)
.|.+.- +.-| .-|- .-++-+++.+ ..++.+.+++..+..
T Consensus 264 ~L~~hp~V~~V~yPGl-gg~~sf~l~~----~~~~~~f~~~l~lf~ 304 (364)
T PRK07269 264 FLKKSPAVKEVLYTGK-GGMISFKVAD----ETKIPHILNSLKVFT 304 (364)
T ss_pred HHHHCCCEEEEECCCC-CCEEEEEECC----HHHHHHHHHHCCCCE
T ss_conf 9975998349977997-7267999688----899999998486343
No 151
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.54 E-value=1e-12 Score=108.97 Aligned_cols=278 Identities=17% Similarity=0.151 Sum_probs=173.2
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHH
Q ss_conf 88104301029899998305102886579888753360067999999999999987188630100001679999999983
Q gi|254780349|r 36 IQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLAL 115 (433)
Q Consensus 36 l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~AL 115 (433)
-+...|..|.-+.+.+.. ..+.++ .+||-=.| .|+--.+.+| ++..+|=|++.|-+-+ ||..|-.++++++
T Consensus 29 ~PIy~sstf~f~~~~~~~-~~~~~~-~~~y~YsR--~gnPT~~~lE----~~la~LEg~~~a~~~s-SGmaAi~~~ll~l 99 (384)
T PRK06434 29 TPIFETSTFVYPNSEKEA-YMDSTR-GMPYIYTR--WGNPTVQAFE----EKYAVLENAEHALSFS-SGMGAITSAILSL 99 (384)
T ss_pred CCCCCCCCEECCCHHHHH-HHHCCC-CCCCEECC--CCCHHHHHHH----HHHHHHHCCCCEEEEC-CHHHHHHHHHHHH
T ss_conf 884177763118878887-643357-68922538--9886699999----9999984998099976-8999999999996
Q ss_pred HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHCCCEEEEECCCCC--CCCCHHH
Q ss_conf 15487488123344841114766543333322013665832356598999999-98604667897055243--5363799
Q gi|254780349|r 116 MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESL-AIEYNPKLIIVGGTAYS--RVWDWER 192 (433)
Q Consensus 116 l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~-a~~~kPklIi~G~S~y~--~~~d~~~ 192 (433)
++|||+|+..+--.||-...-. -..-.|++.- ..+|.+.++.. +...+.|+|++.....| ...|++.
T Consensus 100 l~~Gdhiv~~~~~Yg~T~~l~~--------~~l~~~Gi~v--~~vd~~~~~~~~~~~~~tklv~~Esp~NP~l~v~Di~a 169 (384)
T PRK06434 100 IKKGKRILSISDLYGQTFYFFN--------KVLKTLGIHV--DYIDTDRLNSLDFDPSNYDLIYAESITNPTLKVPDIKN 169 (384)
T ss_pred HCCCCEEEEECCCCCCHHHHHH--------HHHHHCCCEE--EEECCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCHHH
T ss_conf 1899989980798277799999--------8887569727--99578657889607468649999889998763156799
Q ss_pred HHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHH-CHHHHH
Q ss_conf 9988641797899186201244320001232200-2356740456522567---4489833620565016646-543223
Q gi|254780349|r 193 FRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAI-FPGLQG 267 (433)
Q Consensus 193 l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~av-fPg~qg 267 (433)
+.++|++.+ +++|..- |++.+++|+++ ||||..|+.|-+.|-- ||++.++++++++++.... .-|..-
T Consensus 170 ia~~A~~~~--vvVDNTf-----atP~~~~Pl~~GaDivihS~TKYi~GHsDvl~G~v~~~~~~~~~~l~~~~~~~G~~~ 242 (384)
T PRK06434 170 VSSFCHEND--VIVDATF-----ASPYNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNP 242 (384)
T ss_pred HHHHHCCCC--EEEECCC-----CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCC
T ss_conf 997641598--4775476-----520137831038987997035200688886686450588999999999986148989
Q ss_pred HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCC---------CCCEEEECCCCCCCCHH
Q ss_conf 44556668999999997356489999999988899999986168--52334588---------89812631665567679
Q gi|254780349|r 268 GPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLG--FDIVSGGT---------DNHLMLVDLRSKRMTGK 336 (433)
Q Consensus 268 ~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G--~~vv~ggT---------d~H~vlvdl~~~~~~G~ 336 (433)
+|+-.- ++ ++- +. -...-.+|-.+||..+|+.|.++. -+|..-|- -.-++-+++++ +.
T Consensus 243 sP~~a~---L~--lrG-L~-TL~lRm~r~~~nA~~vA~~L~~hp~V~~V~yPgle~ak~~~~g~gg~~sf~l~~----~~ 311 (384)
T PRK06434 243 DPIQAY---LA--LRG-LK-TLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS----ME 311 (384)
T ss_pred CHHHHH---HH--HCC-CC-CHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHCCCCCEEEEEECC----HH
T ss_conf 868899---99--826-76-399999999999999999998099933774852899999837898558999688----99
Q ss_pred HHHHHHHHCCEEEE
Q ss_conf 99998885671880
Q gi|254780349|r 337 RAESILGRVSITCN 350 (433)
Q Consensus 337 ~a~~~Le~~gI~~N 350 (433)
++.+.+++..+...
T Consensus 312 ~a~~f~~~l~l~~~ 325 (384)
T PRK06434 312 DVHKFIRNLEIPMV 325 (384)
T ss_pred HHHHHHHHCCCCEE
T ss_conf 99999984896866
No 152
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.54 E-value=3.5e-13 Score=112.31 Aligned_cols=250 Identities=24% Similarity=0.239 Sum_probs=152.3
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHH
Q ss_conf 81043010298999983051028865798887533600679999999999999871886301000016799999999831
Q gi|254780349|r 37 QLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALM 116 (433)
Q Consensus 37 ~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl 116 (433)
+...|..|.-+.+.+.. +.+ .....||-=.| .|+--.+.+| ++..+|-|++.|-+- -||+.|-.+++++++
T Consensus 29 PIy~sstf~~~~~~~~~-~~~-~~~~~g~~YsR--~gNPT~~~lE----~~la~LEgg~~a~~~-sSGmaAi~~~l~~ll 99 (426)
T PRK05994 29 PIYQTTSFVFNDADHAA-SLF-GLQAFGNIYTR--ITNPTTAVLE----ERVAALEGGTAALAV-ASGHAAQFLVFHTLL 99 (426)
T ss_pred CCCCCCCEEECCHHHHH-HHH-CCCCCCCEECC--CCCHHHHHHH----HHHHHHHCCCEEEEE-CCHHHHHHHHHHHHH
T ss_conf 81178774608878988-741-56657971149--9886699999----999998599728994-488999999999972
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHH
Q ss_conf 548748812334484111476654333332201366583235659899999998604667897055243--536379999
Q gi|254780349|r 117 HPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFR 194 (433)
Q Consensus 117 ~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~ 194 (433)
+|||+|+..+--.||-...-. -.+...+.++..+ |. -|.+++++.+ ..+.|+|++.....| ...|++++.
T Consensus 100 ~~Gd~vv~~~~~Yggt~~~~~-~~l~~~Gi~v~~~--d~----~d~~~~~~~i-~~~T~lv~~EspsNP~l~v~Di~~ia 171 (426)
T PRK05994 100 QPGDEFIAARKLYGGSINQFG-HAFKSFGWQVRWA--DA----DDPASFEAAI-TPRTKAIFIESIANPGGTITDIEAIA 171 (426)
T ss_pred CCCCEEEECCCCCHHHHHHHH-HHHHHCCEEEEEE--CC----CCHHHHHHHC-CCCCEEEEEECCCCCCCCCCCHHHHH
T ss_conf 789989984874268999999-9986088699997--89----9838899736-88754999987899887234789999
Q ss_pred HHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCCCCCCCCC---CEEEEECC-CCHHHHCCHHHCHHHHH--
Q ss_conf 88641797899186201244320001232200-2356740456522567---44898336-20565016646543223--
Q gi|254780349|r 195 SIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTHKSLRGPR---GGLIMTNH-ADLAKKINSAIFPGLQG-- 267 (433)
Q Consensus 195 eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKtl~GPr---gGiI~~~~-~e~~~~i~~avfPg~qg-- 267 (433)
+||++.|+.+++|.. .|++.+++||++ ||||..|+.|.+.|-- ||.|+... .++.+ ..-||-+..
T Consensus 172 ~iA~~~g~~~vVDNT-----~atP~~~~Pl~~GaDivvhS~TKyi~GHsDvlgG~vv~~g~~~w~~---~~~~~~l~~~~ 243 (426)
T PRK05994 172 EVAHRAGLPLIVDNT-----LASPYLIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSK---SGKYPMLSEPR 243 (426)
T ss_pred HHHHHCCCEEEEECC-----CCHHHHCCHHHHCCCEEEEECCCCCCCCCCEEEEEEECCCCCCHHH---CCCCHHHCCCC
T ss_conf 999971991786356-----5204315867748988999645103588763788885265200221---24431223665
Q ss_pred ----HHHHH--------HHHHHHHHH---HHHHCH-----------HHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf ----44556--------668999999---997356-----------489999999988899999986168
Q gi|254780349|r 268 ----GPFMH--------SIAAKAVAF---GEALSS-----------EFRDYAKQIVLNSQALAKKLQFLG 311 (433)
Q Consensus 268 ----~~~~~--------~iaa~aval---~Ea~~~-----------~f~~Ya~qvv~NA~~La~~L~~~G 311 (433)
+..++ .++.....+ .-.+.| -...-.+|-.+||..+|+.|.++.
T Consensus 244 ~~~~g~~~~~~~~~~~~~~~~r~~~lr~lG~~lsP~da~L~lRGL~TL~lRm~r~~~nA~~vA~~L~~hp 313 (426)
T PRK05994 244 PEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTGIETLPLRMQRHSDNALAVAEWLSGHP 313 (426)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 5645305987750578999999877541477568167899972578389999999999999999996299
No 153
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.54 E-value=6.1e-13 Score=110.61 Aligned_cols=250 Identities=16% Similarity=0.152 Sum_probs=151.9
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHH
Q ss_conf 81043010298999983051028865798887533600679999999999999871886301000016799999999831
Q gi|254780349|r 37 QLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALM 116 (433)
Q Consensus 37 ~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl 116 (433)
+...|..|..+.+.+.. ..+..+ .+||-=.|+ |+--.+.+| ++..+|-|++.|-+-+ ||..|-.+++++++
T Consensus 24 PI~~sst~~~~~~~~~~-~~~~~~-~~g~~YsR~--gnPT~~~LE----~~la~LEg~~~a~~~~-SGMaAIs~~ll~ll 94 (424)
T PRK06084 24 PIYQTTSYAFDDTQHGA-DLFDLK-VPGNIYTRI--MNPTNDVLE----QRVAALEGGVGALAVA-SGMAAITYAIQTVA 94 (424)
T ss_pred CCCCCCCEECCCHHHHH-HHHCCC-CCCCEECCC--CCHHHHHHH----HHHHHHHCCCCEEEEC-CHHHHHHHHHHHHC
T ss_conf 82288885318878999-874466-689621199--886799999----9999985998489954-78999999999841
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHH
Q ss_conf 548748812334484111476654333332201366583235-659899999998604667897055243--53637999
Q gi|254780349|r 117 HPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDG-LLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERF 193 (433)
Q Consensus 117 ~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~-~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l 193 (433)
+|||+|+..+--.||-.. +-... ...+++.-.-. .-|.+.+++.+ +.++|+|++.....| ...|++++
T Consensus 95 ~~Gd~iv~~~~~Yggt~~------l~~~~--l~~~gi~~~fvd~~d~~~~~~~i-~~~Tklv~~EsP~NPtl~v~DI~~i 165 (424)
T PRK06084 95 EAGDNIVSVAKLYGGTYN------LLAHT--LPRIGIQTRFAAHDDIAALEALI-DERTKAVFCESIGNPAGNIVDLQAL 165 (424)
T ss_pred CCCCEEEECCCCCCCHHH------HHHHH--HHHCCCEEEEECCCCHHHHHHHC-CCCCEEEEEECCCCCCCEECCHHHH
T ss_conf 899989982798563899------99998--87468615995886779999754-8765189984389998650378999
Q ss_pred HHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHHCHHHHH--
Q ss_conf 988641797899186201244320001232200-2356740456522567---4489833620565016646543223--
Q gi|254780349|r 194 RSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAIFPGLQG-- 267 (433)
Q Consensus 194 ~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~avfPg~qg-- 267 (433)
.+||++.|+++++|.. .|...+++|+++ ||||..|..|.+.|-- ||.|.++.. .....++..|..+..
T Consensus 166 ~~iA~~~g~~~vVDNT-----~atP~~~~Pl~~GaDivvhS~TKYi~GHsDvl~G~vi~~~~-~~~~~~~~~~~~l~~~~ 239 (424)
T PRK06084 166 ADAAHRHGVPLIVDNT-----VATPVLCRPFEHGADIVVHSLTKYMGGHGTSIGGIVVDSGK-FPWAENKERFALLNTPD 239 (424)
T ss_pred HHHHHHCCCEEEEECC-----CCCCCCCCHHHHCCCEEEEECCEECCCCCCEEEEEEECCCC-CHHHHHHHHHHHHCCCC
T ss_conf 9999874995995457-----63523268045289889996652205887603678971661-14767677767753984
Q ss_pred -----HHHHHHHHHH----------------------HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf -----4455666899----------------------9999997356489999999988899999986168
Q gi|254780349|r 268 -----GPFMHSIAAK----------------------AVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLG 311 (433)
Q Consensus 268 -----~~~~~~iaa~----------------------aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G 311 (433)
-.+....... |.-+..-+. -...-.+|-.+||..+|+.|.+..
T Consensus 240 ~~~~~~~~~~~~g~~~~i~~~r~~~~~~~G~~lsp~da~l~lRGL~-TL~lRm~~~~~nA~~iA~~L~~hp 309 (424)
T PRK06084 240 PSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLE-TLALRMERHTENALKVARYLQQHP 309 (424)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 6766638998762678999999988750688788224689875777-199999999998999999987199
No 154
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.54 E-value=4.7e-11 Score=97.45 Aligned_cols=336 Identities=15% Similarity=0.187 Sum_probs=189.0
Q ss_pred HHHCCCCCCCCC--CCCHHHHHHHHCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC--EECCCHHHHH
Q ss_conf 983888104301--029899998305102-88657988875336006799999999999998718863--0100001679
Q gi|254780349|r 32 QNDEIQLIASEN--IVSRAVLEAQGSILT-NKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNF--VNVQSHSGSQ 106 (433)
Q Consensus 32 q~~~l~LiASEN--~~S~~v~~~l~S~l~-nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~--anvqp~SG~~ 106 (433)
.++-|+|=-.|- -+++.|.+++---+. .+..+|+.| |.-..-+.++-+-..+..++-+|.++ -||-..+|+.
T Consensus 33 ~~dvI~L~iGePdf~tP~~i~eA~~~a~~~~~~~~~~~g---Yt~~~G~~eLReAIa~~~~~~~g~~~~~~~I~vt~Ga~ 109 (409)
T PRK07590 33 EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRG---YGPEQGYDFLREKIAENDYQARGCDIDAEEIFVSDGAK 109 (409)
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC---CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHH
T ss_conf 998667889897899999999999999983012688785---89874749999999999999848998768868748679
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCCCC----C-C-CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf 99999998315487488123344841114----7-6-6543333322013665832356598999999986046678970
Q gi|254780349|r 107 MNQGVFLALMHPGDSFMGLSLDSGGHLTH----G-S-SVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVG 180 (433)
Q Consensus 107 An~av~~ALl~pGD~Il~~~l~~GGHlsh----g-~-~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G 180 (433)
.-+..+++++.|||.|+..+...-.+... | . .....+.+-+.+.++++++++.. .+ +...|.|+|++-
T Consensus 110 ~~l~~i~~ll~pGDeViip~P~Yp~Y~~~~~laG~~~~~~~~~~~~~~~~~~~~~e~~f~-----~~-~~~~ktk~iiln 183 (409)
T PRK07590 110 CDTGNILDIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYEGIVYLPCTAENNFI-----PE-LPSEKVDIIYLC 183 (409)
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHCCC-----CC-CCCCCEEEEEEC
T ss_conf 999999998399998996688774469899874885301356655672465588343547-----43-565460299984
Q ss_pred CCCCC--C---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCC---CCC---CEEEECCCCCC--CCCCCEEEE
Q ss_conf 55243--5---36379999886417978991862012443200012322---002---35674045652--256744898
Q gi|254780349|r 181 GTAYS--R---VWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPV---PHC---HIVTTTTHKSL--RGPRGGLIM 247 (433)
Q Consensus 181 ~S~y~--~---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl---~~A---Dvvt~sTHKtl--~GPrgGiI~ 247 (433)
....| . .-+++++.++|.+++.+++.|..|- .++-.+..|..+ +.+ -|+..|.-|++ .|=|-|.++
T Consensus 184 sP~NPTG~V~s~eel~~i~~~a~~~~i~iisDEiY~-~~~~~~~~p~si~~~~~~~~~~I~i~s~SK~~~mtGwRiG~~v 262 (409)
T PRK07590 184 FPNNPTGTVATKEQLKAWVDYAKANGSLILFDAAYE-AFISDPSIPHSIYEIEGAKECAIEFRSFSKNAGFTGTRCAYTV 262 (409)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCC-CCCCCCCCCCCHHHCCCCCCCEEEEEECHHHCCCCCCCEEEEE
T ss_conf 898995655799999999999987497899707620-0136898775776546550146897135264078644369897
Q ss_pred ECCCCHHHHCCHHHC-------HHH-----HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 336205650166465-------432-----23445566689999999973564899999999888999999861685233
Q gi|254780349|r 248 TNHADLAKKINSAIF-------PGL-----QGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIV 315 (433)
Q Consensus 248 ~~~~e~~~~i~~avf-------Pg~-----qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv 315 (433)
..+ ++..+...... -.. .|-+.+-+.|+.|. +.+.-+.+.++..+...+|.+.+.+.|.+.|+.+.
T Consensus 263 ~P~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~aa~a~-l~~~~~~~~~~~~~~y~~rr~~~~~~L~~~g~~~~ 340 (409)
T PRK07590 263 VPK-ELKGKDSEGEIVDLNSLWNRRQSTKFNGVSYIVQRGAEAV-YSPEGQAQIKELISYYMENAKIIREGLEAAGFTVY 340 (409)
T ss_pred CCH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_conf 579-9998864446999999999875025578689999999999-65487899999999999999999999997597672
Q ss_pred CCCCCCCEEEECCCCCCCCHHHH-HHHHHHCCEEEECCCCCCCCCCCCCCCC---CCCCCHHHHHCCCCHHHHHHHHHHH
Q ss_conf 45888981263166556767999-9988856718803789989999888985---1224666730799989999999999
Q gi|254780349|r 316 SGGTDNHLMLVDLRSKRMTGKRA-ESILGRVSITCNKNSIPFDPESPFITSG---IRLGTPSGTTRGFKEKDFEYIGELI 391 (433)
Q Consensus 316 ~ggTd~H~vlvdl~~~~~~G~~a-~~~Le~~gI~~Nkn~iP~D~~~~~~~sG---iRlGT~aiTtrG~~e~em~~iA~li 391 (433)
.+ .-.-.+|+|+.. +++..++ ...|+++|+.+. || +.|-+.| +||.-. -.+++.++-.+-|
T Consensus 341 ~p-~gafY~w~~~~~-~~~~~ef~~~Ll~e~~Vav~----PG---~~FG~~g~g~vRls~a------~~~e~l~ea~~Ri 405 (409)
T PRK07590 341 GG-VNAPYIWVKTPD-GLSSWDFFDKLLQEANVVGT----PG---SGFGPAGEGYFRLSAF------GSRENVLEAMERI 405 (409)
T ss_pred CC-CCCEEEEEECCC-CCCHHHHHHHHHHHCCEEEE----CC---HHHCCCCCCEEEEEEC------CCHHHHHHHHHHH
T ss_conf 79-972389888999-98989999999986999996----86---4658999896999972------8999999999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780349|r 392 AQI 394 (433)
Q Consensus 392 ~~~ 394 (433)
.++
T Consensus 406 ~~~ 408 (409)
T PRK07590 406 KKL 408 (409)
T ss_pred HHH
T ss_conf 985
No 155
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.53 E-value=1.6e-11 Score=100.68 Aligned_cols=316 Identities=16% Similarity=0.213 Sum_probs=205.9
Q ss_pred HHCCCCCCCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH-HHH
Q ss_conf 838881043010--29899998305102886579888753360067999999999999987188630100001679-999
Q gi|254780349|r 33 NDEIQLIASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQ-MNQ 109 (433)
Q Consensus 33 ~~~l~LiASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~-An~ 109 (433)
++-|.|=+.||. +||.|++++...+..- .=|| -..+.+-.+.+ .+.+|.+.-||=...|+. +-.
T Consensus 29 ~~~ikLssNENP~g~s~~v~~al~~~~~~~--~~YP------d~~~~~Lr~~i-----A~~~gv~~e~I~vgnGs~E~i~ 95 (366)
T PRK01533 29 HSFVKLASNENPFGCSPRVLDELQKSWLDH--ALYP------DGGATTLRQTI-----ANKLHVKMEQVLCGSGLDEVIQ 95 (366)
T ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHHHHC--CCCC------CCCHHHHHHHH-----HHHHCCCHHHEEECCCHHHHHH
T ss_conf 876995089999999999999999878745--5796------97789999999-----9986828212998178999999
Q ss_pred HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CC
Q ss_conf 9999831548748812334484111476654333332201366583235659899999998604667897055243--53
Q gi|254780349|r 110 GVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RV 187 (433)
Q Consensus 110 av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~ 187 (433)
.++.++++|||+|+........+-.+ ....|. +...++++. ...|+|++.+.+. .++|+|++.....| ..
T Consensus 96 ~~~~a~~~~gd~vl~~~Ptf~~Y~~~---a~~~g~--~~~~v~l~~--~~~d~~~i~~~~~-~~~klv~l~nPNNPTG~~ 167 (366)
T PRK01533 96 IISRAVLKAGDNIVTAGATFPQYRHH---AIIEGC--EVKEVALNN--GVYDLDEISSVVD-NDTKIVWICNPNNPTGTY 167 (366)
T ss_pred HHHHHHHCCCCEEEECCCCCCHHHHH---HHHCCC--EEEEEECCC--CCCCHHHHHHHCC-CCCCEEEECCCCCCCCCC
T ss_conf 99999947998236589886457999---998086--489983677--8669999997506-598789977999997674
Q ss_pred CCHHHHHHHHHHC--CCEEEECCCCHHHHHHHHCCCCCCCC----CC-EEEECCCCC--CCCCCCEEEEECCCCHHHHCC
Q ss_conf 6379999886417--97899186201244320001232200----23-567404565--225674489833620565016
Q gi|254780349|r 188 WDWERFRSIADSI--GAYLMADISHISGLVVGGQHPSPVPH----CH-IVTTTTHKS--LRGPRGGLIMTNHADLAKKIN 258 (433)
Q Consensus 188 ~d~~~l~eIa~~~--ga~l~~D~aH~~GLIa~g~~~~Pl~~----AD-vvt~sTHKt--l~GPrgGiI~~~~~e~~~~i~ 258 (433)
++-+++.++++.. +.++++|.| +.-++-++.+++.++. -+ +|+-|.-|+ |+|=|=|..+.+. ++.++++
T Consensus 168 ~~~~~l~~ll~~~~~~~~vviDEA-Y~ef~~~~~~~~~~~l~~~~~NliVlrTfSK~~glaGlRiGy~ia~~-~ii~~l~ 245 (366)
T PRK01533 168 VNDRKLTQFIEGISENTLIVIDEA-YYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHE-ELIEKLN 245 (366)
T ss_pred CCHHHHHHHHHHCCCCEEEEECHH-HHHHHCCCCCCHHHHHHHCCCCEEEEECCCHHCCCCCHHHHHHHCCH-HHHHHHH
T ss_conf 670658999862787737861287-89764257871057787618984899727432368303453662899-9999999
Q ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHC-HHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHH
Q ss_conf 6465432234455666899999999735-648-99999999888999999861685233458889812631665567679
Q gi|254780349|r 259 SAIFPGLQGGPFMHSIAAKAVAFGEALS-SEF-RDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGK 336 (433)
Q Consensus 259 ~avfPg~qg~~~~~~iaa~aval~Ea~~-~~f-~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~ 336 (433)
+.--|.- ++.++..|.. .++. .+| +++.+.+.+..+.+...|...|+++.. +++.-||+++. ++.
T Consensus 246 ~~~~p~~-----vn~la~~aa~--aaL~d~~~~~~~~~~~~e~~~~~~~~l~~~g~~v~p--S~aNFilv~~~----~~~ 312 (366)
T PRK01533 246 VVRLPFN-----VSSLAQKAAT--IAFGDDEFIEEIVRVNTEGLRQYESFCKENEIPFYQ--SQTNFIFLPVE----NGG 312 (366)
T ss_pred HHCCCCC-----CCHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC--CCCCEEEEECC----CHH
T ss_conf 8558988-----4399999999--996799999999999999999999999878685899--97877998669----999
Q ss_pred HHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 999988856718803789989999888985122466673079998999999999999960257762
Q gi|254780349|r 337 RAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDGSSSDE 402 (433)
Q Consensus 337 ~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~~~~~~ 402 (433)
+..+.|.+.||.+-. .+++|||.. -..+|++.+-+.+.+.++......
T Consensus 313 ~l~~~L~~~GIlVR~-----------~~~~iRIsv-------gt~eeN~~ll~aLke~~e~~~~~~ 360 (366)
T PRK01533 313 EIYEACAHAGFIIRP-----------FPNGVRITV-------GTREQNEGVISVLQQHFENKKRKS 360 (366)
T ss_pred HHHHHHHHCCEEEEE-----------CCCCEEEEC-------CCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 999999968989989-----------959878827-------999999999999999998556320
No 156
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.53 E-value=2.5e-11 Score=99.44 Aligned_cols=331 Identities=18% Similarity=0.173 Sum_probs=187.5
Q ss_pred HHHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC--EECCCHHHHH-
Q ss_conf 983888104301--02989999830510288657988875336006799999999999998718863--0100001679-
Q gi|254780349|r 32 QNDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNF--VNVQSHSGSQ- 106 (433)
Q Consensus 32 q~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~--anvqp~SG~~- 106 (433)
.++.|+|--.|- .+++.+++++.-.+.+ +.+|..-|+-..-..++-+...+..++-+|.+. -||-..+|+.
T Consensus 33 ~~dVI~l~iG~Pdf~~P~~i~~a~~~a~~~----~~~~~~~Y~~~~G~~eLReaIa~~~~~~~g~~~~pe~Iiit~Ga~~ 108 (396)
T PRK06836 33 AENVFDFSLGNPDVEPPAAVKEALRELAEE----EDPGMHGYMPNAGYPEVREAVAESLNARFGTPLTADHIVMTCGAAG 108 (396)
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHHC----CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHH
T ss_conf 998588689598999779999999999967----9988887798747699999999999998688995898898588799
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC-
Q ss_conf 9999999831548748812334484111476654333332201366583235659899999998604667897055243-
Q gi|254780349|r 107 MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS- 185 (433)
Q Consensus 107 An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~- 185 (433)
|...++.+|++|||.|+..++..-.+. ..+ ....-+.+.++.+.++..+|++++++.+ ..|+|+|++-....|
T Consensus 109 al~~~~~~ll~pGD~Vlvp~P~y~~y~---~~~--~~~g~~~v~v~~~~e~~~~d~~~l~~~i-~~~tk~iilnsP~NPT 182 (396)
T PRK06836 109 ALNVVLKALLNPGDEVIIFAPYFVEYK---FYV--DNHGGKLVVVPPDTEDFQPDLDALEAAI-TPKTKAVIINSPNNPT 182 (396)
T ss_pred HHHHHHHHHCCCCCEEEECCCCCHHHH---HHH--HHCCCEEEEECCCCCCCCCCHHHHHHHC-CCCCEEEEECCCCCCC
T ss_conf 999999996699998998278650689---999--9849979993167656767999999736-7566299986898989
Q ss_pred -CCC---CHHHHHHHHHH------CCCEEEECCCCHHHHHHHH-CCCCCCCCCC--EEEECCCCCC--CCCCCEEEEECC
Q ss_conf -536---37999988641------7978991862012443200-0123220023--5674045652--256744898336
Q gi|254780349|r 186 -RVW---DWERFRSIADS------IGAYLMADISHISGLVVGG-QHPSPVPHCH--IVTTTTHKSL--RGPRGGLIMTNH 250 (433)
Q Consensus 186 -~~~---d~~~l~eIa~~------~ga~l~~D~aH~~GLIa~g-~~~~Pl~~AD--vvt~sTHKtl--~GPrgGiI~~~~ 250 (433)
..+ +++++.++|.+ ++.+++.|..+. .|+-.| .+|+.+...| |+..|.-|++ +|=|-|.+..+.
T Consensus 183 G~v~s~e~l~~i~~l~~~~~~~~~h~i~vIsDEiY~-~l~fd~~~~~s~~~~~d~~i~i~S~SK~~~m~G~RiG~iv~~~ 261 (396)
T PRK06836 183 GVIYSEETLKALGALLEEKSKEYGRPIYLISDEPYR-EIVYDGAEVPYIFKYYKNSIVVYSFSKSLSLPGERIGYIAVNP 261 (396)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCEEEEEECH
T ss_conf 986799999999999998657528867998057407-5313898789957747829999646422046731169998688
Q ss_pred CCHHH---HCCHHHCHH-HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCEEE
Q ss_conf 20565---016646543-2234455666899999999735648999999998889999998616852334-588898126
Q gi|254780349|r 251 ADLAK---KINSAIFPG-LQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVS-GGTDNHLML 325 (433)
Q Consensus 251 ~e~~~---~i~~avfPg-~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~-ggTd~H~vl 325 (433)
++.+ .+....+-. ..|-.+...+...+++...-...+-..| -++-..|.+.|.+.|+.+.. .|+ -.+|
T Consensus 262 -~i~~~~~~~~~~~~~~~~~~~v~a~~~~q~a~~~~~~~~~~~~~y----~~rrd~l~~~L~~~g~~~~~P~Ga--fyl~ 334 (396)
T PRK06836 262 -EMEDADDLMAALVFANRILGFVNAPSLMQRVVAKLQDATVDISIY----KRRRDLLYDALTELGFEFVKPQGA--FYLF 334 (396)
T ss_pred -HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHH----HHHHHHHHHHHHHCCCEECCCCEE--EEEE
T ss_conf -999999999999987655055658899999999974672669999----999999999999849863178816--8998
Q ss_pred ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCC-CCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 31665567679999988856718803789989999888985-12246667307999899999999999996
Q gi|254780349|r 326 VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSG-IRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 326 vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sG-iRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
++. .+.+..++.+.|.+.|+.+. ||. .|-.+| +||.-. ..++.+++-.+.|.+.+
T Consensus 335 ~~~--p~~d~~~f~~~l~e~gV~vv----PG~---~Fg~~g~vRls~a------~~~e~i~eal~rl~~~~ 390 (396)
T PRK06836 335 PKS--PIEDDVAFVEKAQKYNILLV----PGS---GFGAPGYFRLAYC------VDTEQIERSLPAFEKLA 390 (396)
T ss_pred ECC--CCCCHHHHHHHHHHCCEEEE----ECC---CCCCCCCEEEEEC------CCHHHHHHHHHHHHHHH
T ss_conf 618--99999999999996999998----274---3599980899970------89999999999999999
No 157
>PRK13238 tnaA tryptophanase; Provisional
Probab=99.53 E-value=3.2e-11 Score=98.61 Aligned_cols=314 Identities=18% Similarity=0.283 Sum_probs=208.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC--C-------C
Q ss_conf 875336006799999999999998718863010000167999999998315487488123344841114--7-------6
Q gi|254780349|r 67 SKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTH--G-------S 137 (433)
Q Consensus 67 g~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlsh--g-------~ 137 (433)
|..-|+|.+-...++ +-.+++||-+|+ +-.|-|-.|-...+..|++||+.|.+. .|... + .
T Consensus 70 gDEsYAGs~sf~~l~----~av~di~G~~~~-iPtHQGRaAE~Ilf~~l~k~g~~vp~N-----~HFdTTrahie~~G~~ 139 (461)
T PRK13238 70 GDEAYAGSRSYYRLE----DAVKDIFGYEYT-IPTHQGRAAEQILFPVLIKKGDVVPSN-----YHFDTTRAHIELNGGT 139 (461)
T ss_pred HHHHHHCCHHHHHHH----HHHHHHCCCCEE-CCCCCCHHHHHHHHHHHCCCCCEECCC-----CCCCCCHHHHHHCCCE
T ss_conf 223431355499999----999987298644-545663779999999864699785788-----7856507888853986
Q ss_pred CCCCC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC---CEEEE---ECCCCCCCC---CHHHHHHHHHHCCCEEEEC
Q ss_conf 65433-33322013665832356598999999986046---67897---055243536---3799998864179789918
Q gi|254780349|r 138 SVNMS-GKWFKAIPYNVRKEDGLLDMHEIESLAIEYNP---KLIIV---GGTAYSRVW---DWERFRSIADSIGAYLMAD 207 (433)
Q Consensus 138 ~~~~~-g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kP---klIi~---G~S~y~~~~---d~~~l~eIa~~~ga~l~~D 207 (433)
++++- -..++...+ .+-.|++|.+++++.++++-+ .+|++ --|.-..|. +++++++||+++|..++.|
T Consensus 140 ~~dl~~~ea~d~~~~--~pFKGN~Dl~kLe~~i~~~g~~~I~~v~~tiTnN~~GGQPVSm~Nir~v~~la~~~~ip~~lD 217 (461)
T PRK13238 140 AVNLVIDEALDTGSR--YPFKGNFDLEKLEALIEEVGADNIPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVLD 217 (461)
T ss_pred EEEEECHHHCCCCCC--CCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 773054431495767--897887799999999987384465489999862687881646899999999999829959986
Q ss_pred CCCHHH---HHHH---HCC--------CCCCCCCCEEEECCCCCCCCCCCEEEEECCC-CHHHHCCHHH-----CHHHHH
Q ss_conf 620124---4320---001--------2322002356740456522567448983362-0565016646-----543223
Q gi|254780349|r 208 ISHISG---LVVG---GQH--------PSPVPHCHIVTTTTHKSLRGPRGGLIMTNHA-DLAKKINSAI-----FPGLQG 267 (433)
Q Consensus 208 ~aH~~G---LIa~---g~~--------~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~-e~~~~i~~av-----fPg~qg 267 (433)
+|-++- +|-- |.- .-=+.|||.+|.|.-|---..-||+|..||. +++++...-+ ||.+ |
T Consensus 218 aaRfaENAyFIk~RE~gY~d~si~eI~rEmfs~aDg~tmSaKKD~~vniGG~l~~~d~~~l~~~~~~~~i~~EGf~TY-G 296 (461)
T PRK13238 218 AARFAENAYFIKQREPGYKDKSIKEITREMFSYADGLTMSAKKDAMVNIGGLLCFKDDSDLYTKCRTLCILYEGFPTY-G 296 (461)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCEECCCCEEEECCHHHHHHHHHHHEEECCCCCCC-C
T ss_conf 566766457887325312579999999999845237999833012104422899667599999987442420587566-8
Q ss_pred HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC-------CCCHHHH-H
Q ss_conf 4455666899999999735648999999998889999998616852334588898126316655-------6767999-9
Q gi|254780349|r 268 GPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSK-------RMTGKRA-E 339 (433)
Q Consensus 268 ~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~-------~~~G~~a-~ 339 (433)
|.--.-+.|+|+.|.|...+++-. .-+.-.+.|++.|.+.|++|+. -+-.|-|.||.+.+ ..-|... .
T Consensus 297 GlaGRDmeAlAvGL~E~~d~dyl~---~Ri~qv~yLg~~L~~~GVPvv~-P~GGHAv~iDA~~fLPhip~~qfPa~aLa~ 372 (461)
T PRK13238 297 GLAGRDMEALAVGLYEGMDEDYLA---YRIAQVEYLGEGLEEAGVPVVT-PAGGHAVFVDAGKFLPHIPAEQFPAQALAC 372 (461)
T ss_pred CCCHHHHHHHHCCHHHHCCHHHHH---HHHHHHHHHHHHHHHCCCCEEC-CCCCEEEEEEHHHHCCCCCHHHCCHHHHHH
T ss_conf 833877999973578760779999---7799999999999977997056-798518997467856799814481899999
Q ss_pred HHHHHCCEEEE-CCCCCC--CCCC-CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 98885671880-378998--9999-8889851224666730799989999999999999602
Q gi|254780349|r 340 SILGRVSITCN-KNSIPF--DPES-PFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 340 ~~Le~~gI~~N-kn~iP~--D~~~-~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
..-...||..- .-++-+ ||.. -..++-.-|=--++-||=+...+|+-||+-+..+-+.
T Consensus 373 eLY~~~GIR~vEiGs~~~grdp~tg~~~~~~~ELvRLAiPRRvYT~sH~dyva~~l~~l~~~ 434 (461)
T PRK13238 373 ELYLEAGIRAVEIGSLLLGRDPDTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKWVKEN 434 (461)
T ss_pred HHHHHCCCCEEEECCHHCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99997295578750012054888766578760000242450003588999999999999956
No 158
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.53 E-value=7.9e-11 Score=95.91 Aligned_cols=348 Identities=17% Similarity=0.224 Sum_probs=197.9
Q ss_pred HHHHHHCH-HHHHHHHHHHHHH---HHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH-HHHH
Q ss_conf 46978589-9999999999999---83888104301--0298999983051028865798887533600679999-9999
Q gi|254780349|r 12 QSLIESDP-DVFSLIGQESCRQ---NDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDI-ENIA 84 (433)
Q Consensus 12 ~~l~~~Dp-ei~~~i~~e~~rq---~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~i-E~la 84 (433)
+.++...| .|.++++.-.+-+ ++.|+|-..|- -+++.+.+++... ... ..-|+-.+-..++ |.+|
T Consensus 5 ~r~~~l~~s~ir~~~~~a~~~~~~G~~vi~l~iG~Pd~~~P~~~~~a~~~~-~~~-------~~~Y~~~~G~~~LReaia 76 (396)
T PRK07568 5 KRVKEMPASPIRKLVPYADAAKKRGIKVYHLNIGQPDIKTPEVFFEAIRNY-DEE-------VLAYSHSAGIDSLREAFS 76 (396)
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHH-CCC-------CCCCCCCCCCHHHHHHHH
T ss_conf 584539988899999999999977998088879889998769999999850-737-------898899867199999999
Q ss_pred HHHHHHHCCCC--CEECCCHHHH-HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CC
Q ss_conf 99999871886--3010000167-99999999831548748812334484111476654333332201366583235-65
Q gi|254780349|r 85 IERAKKLFNVN--FVNVQSHSGS-QMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDG-LL 160 (433)
Q Consensus 85 ~~~a~~lF~a~--~anvqp~SG~-~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~-~I 160 (433)
+..++ +|.+ .-||-..+|+ +|...++.+|++|||+|+..+...-++.. .+.....+.++++++++++ .+
T Consensus 77 -~~~~~-~g~~~~~d~I~iT~Ga~~al~~~~~~l~~pGD~Vlv~~P~y~~y~~-----~~~~~g~~~v~v~~~~e~g~~l 149 (396)
T PRK07568 77 -KYYKR-FNIDFDKDEIIVTNGGSEAILFALMAICDPGDEIIVPEPFYANYNG-----FATSAGVKIVPVTTKIEEGFHL 149 (396)
T ss_pred -HHHHH-HCCCCCHHEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH-----HHHHCCCEEEECCCCHHHCCCC
T ss_conf -99998-6889882228985780699999999727998989993897532599-----9998498785167672118878
Q ss_pred -CHHHHHHHHHHHCCCEEEEECCCCC--C---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHH-CCCCCCCCC---C--
Q ss_conf -9899999998604667897055243--5---36379999886417978991862012443200-012322002---3--
Q gi|254780349|r 161 -DMHEIESLAIEYNPKLIIVGGTAYS--R---VWDWERFRSIADSIGAYLMADISHISGLVVGG-QHPSPVPHC---H-- 228 (433)
Q Consensus 161 -D~d~~~~~a~~~kPklIi~G~S~y~--~---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g-~~~~Pl~~A---D-- 228 (433)
|++++++.+. .+.|+|++-....| . .-.++++.++|++.|.+++.|..+- .|+-.| .+++.+... |
T Consensus 150 p~~~~l~~~~~-~~tk~ii~~~P~NPTG~v~s~~~~~~l~~la~~~~~~ii~De~Y~-~l~y~g~~~~s~~~~~~~~~~v 227 (396)
T PRK07568 150 PKKEEIEKLIT-DKTKAILISNPGNPTGVVYTKEELRQLADIAKEHDLFLISDEVYR-EFTYDGLKYTSAMNIEGIEDRV 227 (396)
T ss_pred CCHHHHHHHCC-CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCEEEECCCCHH-HHEECCCCCCCHHCCCCCCCCE
T ss_conf 96999997477-657499858992988754015789999999987106674245355-5220898775720055654422
Q ss_pred EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5674045652--25674489833620565016646543223445566689999999973564899999999888999999
Q gi|254780349|r 229 IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKK 306 (433)
Q Consensus 229 vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~ 306 (433)
|+.+|.-|++ +|=|-|.+.+.++++.+.+.+-. ....+.+.+.+.|+.+ +| +.-.....+..++..++...|.+.
T Consensus 228 I~i~S~SK~~~~~G~RiG~~v~~~~~~~~~~~~~~-~~~~~~~~~~Q~aa~~-~l-~~~~~~~~~~~~~y~~rrd~~~~~ 304 (396)
T PRK07568 228 IIIDSVSKRYSACGARIGSLITKNKELIKQAMKLC-QARLCPPTLEQIGAAA-LL-NTPESYFKEVREEYEKRRDILYEG 304 (396)
T ss_pred EEECCCCCCCCCCHHHEEEEECCCHHHHHHHHHHH-HCCCCCCHHHHHHHHH-HH-HCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 56404556657840543555309999999999971-2147897799999999-98-587799999999999999999999
Q ss_pred HHHC-CCCCCC-CCCCCCEEEECCCCCCCCHHHH-HHHHHH-----CCEEEECCCCCCCCCCCCCC------CCCCCCCH
Q ss_conf 8616-852334-5888981263166556767999-998885-----67188037899899998889------85122466
Q gi|254780349|r 307 LQFL-GFDIVS-GGTDNHLMLVDLRSKRMTGKRA-ESILGR-----VSITCNKNSIPFDPESPFIT------SGIRLGTP 372 (433)
Q Consensus 307 L~~~-G~~vv~-ggTd~H~vlvdl~~~~~~G~~a-~~~Le~-----~gI~~Nkn~iP~D~~~~~~~------sGiRlGT~ 372 (433)
|.+. |+.+.. .| .=.+|+++... +..++ ...|++ .|+.+ +||. .|.+ .-|||.-.
T Consensus 305 L~~~~g~~~~~P~G--gfyl~~~lp~~--~~~~f~~~ll~~~~~~~~~V~v----~PG~---~F~~~~g~g~~~iRls~~ 373 (396)
T PRK07568 305 LNKIPGVVCEKPTG--AFYIIAKLPVD--DAEDFAKWMLTDFEYNGETVMV----APAS---GFYATPGLGKDEIRIAYV 373 (396)
T ss_pred HHHCCCCEECCCCE--EEEEEEECCCC--CHHHHHHHHHHHHHHCCCEEEE----ECCH---HHCCCCCCCCCEEEEEEC
T ss_conf 97079978678885--78999958999--9999999999962124886999----7763---416899899996999971
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 673079998999999999999960
Q gi|254780349|r 373 SGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 373 aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
..++++++-.+.|.++|+
T Consensus 374 ------~~~e~l~ea~~Rl~~~l~ 391 (396)
T PRK07568 374 ------LEKEDLRRAMEILKKALE 391 (396)
T ss_pred ------CCHHHHHHHHHHHHHHHH
T ss_conf ------999999999999999999
No 159
>PRK09148 aminotransferase; Validated
Probab=99.51 E-value=5.3e-11 Score=97.13 Aligned_cols=357 Identities=14% Similarity=0.145 Sum_probs=203.4
Q ss_pred HHHHHCHHHHHHHHHHHH----HHHHCCCCCCCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 697858999999999999----99838881043010--298999983051028865798887533600679999999999
Q gi|254780349|r 13 SLIESDPDVFSLIGQESC----RQNDEIQLIASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIE 86 (433)
Q Consensus 13 ~l~~~Dpei~~~i~~e~~----rq~~~l~LiASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~ 86 (433)
-+++..|-++.-+.+... .-++-|+|--.|-- +++.+.+++...+.+.-+.||+- ..-+.++-+-..+
T Consensus 7 r~~~~~~~~~~~~~~~~~~~~~~G~~Vi~L~iG~Pd~~~P~~i~~a~~~a~~~~~~~~Y~~------~~G~p~LReaia~ 80 (406)
T PRK09148 7 RIRRLPPYVFEQVNRAKAAARAAGADIIDLGMGNPDLPTPQHIVDKLCETAGKPRTHRYSA------SKGIPGLRRAQAA 80 (406)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC------CCCCHHHHHHHHH
T ss_conf 7863899889999999999986799828898989999978999999999974998887899------7585999999999
Q ss_pred HHHHHCCCCC--E-ECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC
Q ss_conf 9998718863--0-100001679-9999999831548748812334484111476654333332201366583235-659
Q gi|254780349|r 87 RAKKLFNVNF--V-NVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDG-LLD 161 (433)
Q Consensus 87 ~a~~lF~a~~--a-nvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~-~ID 161 (433)
..++-+|.+. - +|-..+|+. |-..++.+|++|||.|+..+...-.| .......| -....+++++++. ..|
T Consensus 81 ~~~~r~g~~~~p~~~Iivt~Ga~~al~~~~~al~~pGD~Vli~~P~Yp~y---~~~~~~~g--~~~~~v~~~~~~~~~~~ 155 (406)
T PRK09148 81 YYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVVLCPNPSYPIH---AFGFIMAG--GVIRSVPAEPDEEFFPA 155 (406)
T ss_pred HHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCHHHH---HHHHHHHC--CCEEECCCCCCCCCCCC
T ss_conf 99998589889887399887989999999999669999999807765878---99999817--91586057764333302
Q ss_pred HHHHHHHHHHHCCCEEEEECCCCC--CCC---CHHHHHHHHHHCCCEEEECCCCHHHHHHHHC-CCCCCCC---CC--EE
Q ss_conf 899999998604667897055243--536---3799998864179789918620124432000-1232200---23--56
Q gi|254780349|r 162 MHEIESLAIEYNPKLIIVGGTAYS--RVW---DWERFRSIADSIGAYLMADISHISGLVVGGQ-HPSPVPH---CH--IV 230 (433)
Q Consensus 162 ~d~~~~~a~~~kPklIi~G~S~y~--~~~---d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~-~~~Pl~~---AD--vv 230 (433)
++++.+... .|+|+||+-....| ..+ .++++.++|++.+.+++.|..+- .|+-.+. +++.+.. .| |+
T Consensus 156 le~~~~~~~-~ktk~iil~~P~NPTG~v~~~~~l~~l~~~a~~~~i~visDEiY~-~l~~~~~~~~s~~~~~~~~~~~I~ 233 (406)
T PRK09148 156 LERAVRHSI-PKPIALIVNYPSNPTAYVADLDFYKDLVAFAKKHDIWILSDLAYS-EIYFDGNPPPSVLQVPGAKDVTVE 233 (406)
T ss_pred HHHHHHHCC-CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCHH-HHEECCCCCCCHHHCCCHHHHHHH
T ss_conf 999997458-764499977899988876899999999987540548996342253-513788767554317430322111
Q ss_pred EECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 74045652--2567448983362056501664654322344556668999999997356489999999988899999986
Q gi|254780349|r 231 TTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQ 308 (433)
Q Consensus 231 t~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~ 308 (433)
.+|.-|+| +|=|-|.+..++ ++.+++.+.---...+.+.+.+.|+.+ +|.+ .+....+..+..-++...|.+.|.
T Consensus 234 ~~s~SK~~~m~G~RiG~~v~~~-~li~~l~~~~~~~~~~~~~~~Q~aa~~-aL~~-~~~~~~~~~~~y~~rrd~l~~~L~ 310 (406)
T PRK09148 234 FTSMSKTFSMAGWRMGFAVGNE-RLIAALTRVKSYLDYGAFTPIQVAATA-ALNG-PQDCIAEMREVYKKRRDVLVESFG 310 (406)
T ss_pred HCCCCHHCCCCCCCEEEEECCH-HHHHHHHHHHHHCCCCCCHHHHHHHHH-HHHC-CHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 1142030367553359997599-999999999976437887899999999-9759-678999999999999999999888
Q ss_pred HCCCCCCC-CCCCCCEEEECCCC--CCCCHHH-HHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHH
Q ss_conf 16852334-58889812631665--5676799-99988856718803789989999888985122466673079998999
Q gi|254780349|r 309 FLGFDIVS-GGTDNHLMLVDLRS--KRMTGKR-AESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDF 384 (433)
Q Consensus 309 ~~G~~vv~-ggTd~H~vlvdl~~--~~~~G~~-a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em 384 (433)
+.|+++.. .|| =.+|+|+.+ .+++..+ +...|+++||.+. ||..=...-..-+||.-. ..++.+
T Consensus 311 ~~g~~~~~P~G~--~y~w~~l~~~~~~~~~~~f~~~Ll~~~gV~v~----PG~~Fg~~g~~~iRlsfa------~~~~~L 378 (406)
T PRK09148 311 RAGWDIPPPAAS--MFAWAPIPEAFRHLGSLEFSKLLVEKADVAVA----PGVGFGEHGEGYVRIALV------ENEQRI 378 (406)
T ss_pred HCCCEECCCCEE--EEEEEECCCCCCCCCHHHHHHHHHHCCCEEEE----CCHHHCCCCCCEEEEEEC------CCHHHH
T ss_conf 669764379836--99998886434789999999999973999998----973218899885999973------889999
Q ss_pred HHHHHHHHHHHHC
Q ss_conf 9999999999602
Q gi|254780349|r 385 EYIGELIAQILDG 397 (433)
Q Consensus 385 ~~iA~li~~~L~~ 397 (433)
++-.+-|.+.|..
T Consensus 379 ~eal~Rl~~~l~~ 391 (406)
T PRK09148 379 RQAARNIKRFLSS 391 (406)
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999999999976
No 160
>KOG0053 consensus
Probab=99.50 E-value=1.7e-12 Score=107.50 Aligned_cols=220 Identities=20% Similarity=0.258 Sum_probs=155.8
Q ss_pred CCCCCCCC----CCC--CCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
Q ss_conf 57988875----336--006799999999999998718863010000167999999998315487488123344841114
Q gi|254780349|r 62 AEGYPSKR----YYG--GCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTH 135 (433)
Q Consensus 62 aeG~pg~r----yy~--G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlsh 135 (433)
.++-++.+ +|. |+--.+.+| ....+|-|++++=+-+ ||..|-.+++..|+++||+|...+...||-..
T Consensus 58 ~~~~~~~~~~~~~Ysr~~nPt~~~le----~~iaal~ga~~~l~fs-SGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~- 131 (409)
T KOG0053 58 NEGEHGGNLDGYDYSRSGNPTRDVLE----SGIAALEGAAHALLFS-SGMAAITVALLHLLPAGDHIVATGDVYGGTLR- 131 (409)
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHH----HHHHHHHCCCEEEEEC-CCHHHHHHHHHHHCCCCCCEEEECCCCCCHHH-
T ss_conf 64233566655122347899668999----9999871886389934-40789999999846789858971787500999-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC--CEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCH
Q ss_conf 766543333322013665832356598999999986046--67897055243--53637999988641797899186201
Q gi|254780349|r 136 GSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNP--KLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHI 211 (433)
Q Consensus 136 g~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kP--klIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~ 211 (433)
+..+ +.. .+++ +.-.+|.++++++....+| ++|++.....| ...|+++++++|++.|.++++|..
T Consensus 132 -----~l~~-~~~-~~gi--e~~~vd~~~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnT-- 200 (409)
T KOG0053 132 -----ILRK-FLP-KFGG--EGDFVDVDDLKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNT-- 200 (409)
T ss_pred -----HHHH-HHH-HHCC--EEEEECHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECC--
T ss_conf -----9999-999-7093--5433041667889986266706999977999750045699999987417978999577--
Q ss_pred HHHHHHHCCCCCCCC-CCEEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCH
Q ss_conf 244320001232200-2356740456522567---448983362056501664654322344556668999999997356
Q gi|254780349|r 212 SGLVVGGQHPSPVPH-CHIVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSS 287 (433)
Q Consensus 212 ~GLIa~g~~~~Pl~~-ADvvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~ 287 (433)
++++.+++|+++ ||||+.|-.|.|.|-- +|.|..|.+++++++.... -. =|.-++-+.+ -+ +.-
T Consensus 201 ---f~~p~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~--~~-lg~~~~p~~~---~l---l~R 268 (409)
T KOG0053 201 ---FGSPYNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQ--ED-LGWCEDPFDL---FL---LSR 268 (409)
T ss_pred ---CCCCCCCCHHHCCCCEEEEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHH--HH-HCCCCCHHHH---HH---HHC
T ss_conf ---676333671213887899851014447766351477617499999999999--98-5579988999---99---866
Q ss_pred HHHH---HHHHHHHHHHHHHHHHHHC
Q ss_conf 4899---9999998889999998616
Q gi|254780349|r 288 EFRD---YAKQIVLNSQALAKKLQFL 310 (433)
Q Consensus 288 ~f~~---Ya~qvv~NA~~La~~L~~~ 310 (433)
.++. -+.|.-+||..+|+.|...
T Consensus 269 glktl~lRi~~~~ena~~~A~~Le~~ 294 (409)
T KOG0053 269 GLKTLHLRINKHSENALKIALLLEAH 294 (409)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 84155404988887899999876508
No 161
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.50 E-value=8.1e-11 Score=95.83 Aligned_cols=323 Identities=13% Similarity=0.111 Sum_probs=199.7
Q ss_pred HHCCCCCCCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH---HCCCCCEECCCHHHHHH
Q ss_conf 838881043010--2989999830510288657988875336006799999999999998---71886301000016799
Q gi|254780349|r 33 NDEIQLIASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKK---LFNVNFVNVQSHSGSQM 107 (433)
Q Consensus 33 ~~~l~LiASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~---lF~a~~anvqp~SG~~A 107 (433)
.+.+-|-+.||. +||.++++....+..-. ... +|...++-+-.+.+|...... -++...-+|=...|+.-
T Consensus 25 ~~~ikL~~NEnp~g~p~~v~eai~~~~~~~~----~~~-rYPd~~~~~Lr~aiA~~~~~~~~~~~~v~~e~I~vgnGs~e 99 (369)
T PRK02610 25 PALDRLDTNESPYDLPTDLKQKLAWLYQQGI----ASN-RYPDGGHLALKQAIAEYVNESTAGSWQITPANISVGNGSDE 99 (369)
T ss_pred CCCEECCCCCCCCCCCHHHHHHHHHHHHCCH----HCC-CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHH
T ss_conf 7825723989899999899999999987031----206-59999879999999988575545556898156998489999
Q ss_pred HH-HHHHHHHCCCC-EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC---CEEEEECC
Q ss_conf 99-99998315487-488123344841114766543333322013665832356598999999986046---67897055
Q gi|254780349|r 108 NQ-GVFLALMHPGD-SFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNP---KLIIVGGT 182 (433)
Q Consensus 108 n~-av~~ALl~pGD-~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kP---klIi~G~S 182 (433)
-+ .++.+.+.||| .|+..+...+.+- ......|. ..+.++.++++..+|++.+.+.+.+..+ |+|++...
T Consensus 100 li~~l~~a~~~~~~~~vl~~~Ptf~~Y~---~~a~~~g~--~~~~v~~~~~~f~~d~~~~~~~i~~~~~~~~klv~l~nP 174 (369)
T PRK02610 100 LIRSLLIATCLGGEGSILVAEPTFSMYG---ILAQTLGI--PVVRVGRDPENFEIDLAAAQTAIEQTQNPPVRVVFVVHP 174 (369)
T ss_pred HHHHHHHHHHCCCCCEEEECCCCHHHHH---HHHHHCCC--EEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 9999999995489985996787655899---99997596--279945764366569899999998555988239997899
Q ss_pred CCC--CCCCHHHHHHHHH-HCCCEEEECCCCHHHHHHHHCCCCCCC-CCC-EEEECCCCC--CCCCCCEEEEECCCCHHH
Q ss_conf 243--5363799998864-179789918620124432000123220-023-567404565--225674489833620565
Q gi|254780349|r 183 AYS--RVWDWERFRSIAD-SIGAYLMADISHISGLVVGGQHPSPVP-HCH-IVTTTTHKS--LRGPRGGLIMTNHADLAK 255 (433)
Q Consensus 183 ~y~--~~~d~~~l~eIa~-~~ga~l~~D~aH~~GLIa~g~~~~Pl~-~AD-vvt~sTHKt--l~GPrgGiI~~~~~e~~~ 255 (433)
..| ..++-+++..+++ ..++++++|.|= ..+- +.-.-.-+. +-+ ||+-|.-|+ |+|=|=|..+++. ++.+
T Consensus 175 NNPTG~~~~~~~l~~l~~~~~~~~vvvDEaY-~ef~-~~s~~~~~~~~~NlivlrTfSK~~glaGlRlGy~ia~~-~~i~ 251 (369)
T PRK02610 175 NSPTGNPLTAAELEWLRSLPEDILVVIDEAY-FEFS-QTTLVPELAQHPNWVILRTFSKAFRLAAHRVGYAIGHP-ELIA 251 (369)
T ss_pred CCCCCCCCCHHHHHHHHHCCCCEEEEECCCE-EECC-CCCCCHHHHCCCCEEEEECCCHHHCCCCCCCEECCCCH-HHHH
T ss_conf 6972656799999999846997699833676-0215-55321024317875898526344067665513111799-9999
Q ss_pred HCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCEEEECCCCCCCC
Q ss_conf 0166465432234455666899999999735648999999998889999998616-852334588898126316655676
Q gi|254780349|r 256 KINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHLMLVDLRSKRMT 334 (433)
Q Consensus 256 ~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~vlvdl~~~~~~ 334 (433)
.+++.--|.-+++ +.+.||.+ +| + -...+.+..+++.+.-+.|.+.|.+. |+.+. .++..-+|+++.. ..+
T Consensus 252 ~l~~~~~p~~v~~--~a~~aa~~-aL-~-~~~~~~~~~~~~~~eR~~l~~~L~~l~g~~v~--ps~aNFil~~~~~-~~~ 323 (369)
T PRK02610 252 VLEKVRLPYNLPS--FSQAAAQL-AL-E-HRDELLAAIPEILQERDKLYRALQELPQLRVW--PSAANFLFLRLQG-AQD 323 (369)
T ss_pred HHHHHCCCCCCCH--HHHHHHHH-HH-C-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEC--CCCCEEEEEECCC-CCC
T ss_conf 9998249988489--99999999-97-6-94999999999999999999999867997789--9986089998899-756
Q ss_pred HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCC--CCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 79999988856718803789989999888985122--466673079998999999999999960
Q gi|254780349|r 335 GKRAESILGRVSITCNKNSIPFDPESPFITSGIRL--GTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 335 G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRl--GT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
.....+.|.+.||.+-. .++|||| ||+ +|++.+-+-+.++|.
T Consensus 324 ~~~~~~~L~~~Gi~VR~-----------~~~~lRIsvgt~---------een~~~l~~Lk~~L~ 367 (369)
T PRK02610 324 LAALHQALKNQGTLVRH-----------TAGGLRITIGTP---------EENQRTLARLQAALT 367 (369)
T ss_pred HHHHHHHHHCCCEEECC-----------CCCEEEEEECCH---------HHHHHHHHHHHHHHH
T ss_conf 99999999829909998-----------999089994999---------999999999999996
No 162
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.50 E-value=1.6e-11 Score=100.66 Aligned_cols=279 Identities=15% Similarity=0.146 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCC---EECCCHHHHHHHHHHHHHHH------------CCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf 799999999999998718863---01000016799999999831------------548748812334484111476654
Q gi|254780349|r 76 YVDDIENIAIERAKKLFNVNF---VNVQSHSGSQMNQGVFLALM------------HPGDSFMGLSLDSGGHLTHGSSVN 140 (433)
Q Consensus 76 ~~d~iE~la~~~a~~lF~a~~---anvqp~SG~~An~av~~ALl------------~pGD~Il~~~l~~GGHlshg~~~~ 140 (433)
-.-++|..+++-..+++|... --+=-.+||.||+.++++-- ....+. .+=.+.-.|.|..+...
T Consensus 35 ~~t~lE~~vi~wl~~l~g~p~~~~~G~~tsGgs~anl~al~~AR~~~~~~~~~~~~~~~~~~-~v~~s~~aH~Sv~KAa~ 113 (345)
T cd06450 35 AATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKL-VIVCSDQAHVSVEKAAA 113 (345)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE-EEEECCCCCHHHHHHHH
T ss_conf 89999999999999983899778876982756899999999999999888874167788876-99988975289999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC-----CCEEE--EECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHH
Q ss_conf 333332201366583235659899999998604-----66789--70552435363799998864179789918620124
Q gi|254780349|r 141 MSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYN-----PKLII--VGGTAYSRVWDWERFRSIADSIGAYLMADISHISG 213 (433)
Q Consensus 141 ~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~k-----PklIi--~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~G 213 (433)
+.|..+..+ ++|+ ++.+|.+.+++.+++.+ |=+|+ +|.+...-.-|++++++||++.|.++++|+|+-..
T Consensus 114 ilg~~~~~v--p~d~-~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiD~l~~i~~i~~~~~iwlHVDaA~GG~ 190 (345)
T cd06450 114 YLDVKVRLV--PVDE-DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGF 190 (345)
T ss_pred HCCCCEEEE--ECCC-CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEECHHCCH
T ss_conf 748976997--5399-9808899999999999866997389995578767625678999999999849947751000120
Q ss_pred HHHHHCCCCC---CCCCCEEEECCCCCCCCCCC-EEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHH
Q ss_conf 4320001232---20023567404565225674-4898336205650166465432234455666899999999735648
Q gi|254780349|r 214 LVVGGQHPSP---VPHCHIVTTTTHKSLRGPRG-GLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEF 289 (433)
Q Consensus 214 LIa~g~~~~P---l~~ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f 289 (433)
++....+..- ++.||-+|...||-+.-|-+ |+++.| ...+-.+|+..-...+
T Consensus 191 ~~~~~~~~~~~~gie~aDSit~d~HK~l~~p~~~~~~l~r------------------------alklw~~l~~~G~~g~ 246 (345)
T cd06450 191 LLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR------------------------ALKLWATLRRFGRDGY 246 (345)
T ss_pred HHCCCCCCHHHCCCCCCCEEEECCHHCCCCCCCCEEEEHH------------------------HHHHHHHHHHHHHHHH
T ss_conf 1106220076579999888998812224878882688618------------------------8899999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCEEEECCCCCC---CCHHHHHHHHHHCC-EEEECCCCCCCCCCCCCC
Q ss_conf 999999998889999998616-8523345888981263166556---76799999888567-188037899899998889
Q gi|254780349|r 290 RDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHLMLVDLRSKR---MTGKRAESILGRVS-ITCNKNSIPFDPESPFIT 364 (433)
Q Consensus 290 ~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~vlvdl~~~~---~~G~~a~~~Le~~g-I~~Nkn~iP~D~~~~~~~ 364 (433)
++..++.+++|+.|++.+.+. +|.+++. -+..+|....++.. ..-.+..++|.+.| ..++...+++-
T Consensus 247 ~~~i~~~~~~a~~l~~~l~~~~~~el~~~-p~l~iV~Fr~~~~~~~d~~~~~l~~~l~~~g~~~vs~t~~~g~------- 318 (345)
T cd06450 247 GEHIDRIVDLAKYLAELIRADPGFELLGE-PNLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTLGGP------- 318 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEECC-CCEEEEEEEECCCHHCCHHHHHHHHHHHHCCCEEEEEEEECCE-------
T ss_conf 99999999999999999962989899669-9658999997682011489999999998139999861599997-------
Q ss_pred CCCCCCCHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 85122466673079998999999999999
Q gi|254780349|r 365 SGIRLGTPSGTTRGFKEKDFEYIGELIAQ 393 (433)
Q Consensus 365 sGiRlGT~aiTtrG~~e~em~~iA~li~~ 393 (433)
..||+-..... -.++|++++-+-|.+
T Consensus 319 ~~lR~~i~n~~---tt~~di~~l~~~i~~ 344 (345)
T cd06450 319 NVLRFVVTNPL---TTRDDADALLEDIER 344 (345)
T ss_pred EEEEEEECCCC---CCHHHHHHHHHHHHH
T ss_conf 89999979999---999999999999974
No 163
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase; InterPro: IPR011282 This entry represents a narrowly defined clade of animal and bacterial (almost exclusively proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homologue from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.; GO: 0008890 glycine C-acetyltransferase activity.
Probab=99.50 E-value=1.1e-12 Score=108.71 Aligned_cols=315 Identities=19% Similarity=0.294 Sum_probs=219.7
Q ss_pred HHCCCCCCCCCCC----CHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHH
Q ss_conf 8388810430102----989999830510288657988875336006799999999999998718863010000167999
Q gi|254780349|r 33 NDEIQLIASENIV----SRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMN 108 (433)
Q Consensus 33 ~~~l~LiASEN~~----S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An 108 (433)
++.||++|. ||+ .|.|-+|--.-|-.. -=|..--||-=||+-+.+ +| ..+..+.|+-|-+-..+ |+.-||
T Consensus 40 ~~vlNfCAN-NYLGLs~HP~~I~AA~~Al~~~-GfGlsSVRFICGTQd~HK--~L-E~~iA~F~~~EDtILY~-scFDAN 113 (395)
T TIGR01822 40 REVLNFCAN-NYLGLSDHPDVIQAAKDALDEH-GFGLSSVRFICGTQDLHK--EL-EAKIAAFLGTEDTILYA-SCFDAN 113 (395)
T ss_pred CCHHHHHHH-CCCCCCCCHHHHHHHHHHHHHC-CCCEEEEEEECCCCHHHH--HH-HHHHHHHHCCCCHHHHH-HHHHCC
T ss_conf 231443100-0056467557999999988743-895134321216743568--99-99999971653044545-666305
Q ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH---HHHHH--CCCEEEEEC--
Q ss_conf 99999831548748812334484111476654333332201366583235659899999---99860--466789705--
Q gi|254780349|r 109 QGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIES---LAIEY--NPKLIIVGG-- 181 (433)
Q Consensus 109 ~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~---~a~~~--kPklIi~G~-- 181 (433)
-.+|-+|+.+-|-|++=.|. |++-+- .-|.=+...|-. ...|+++||. .|++. |-+||.-++
T Consensus 114 gGlFE~LLg~eDAiiSDaLN------HASIID-GvRLCKAkrYRY----~~~dm~dLe~~L~~A~~~Gar~~Li~tDGvF 182 (395)
T TIGR01822 114 GGLFETLLGEEDAIISDALN------HASIID-GVRLCKAKRYRY----ANNDMADLEAQLKEAQAAGARHRLIATDGVF 182 (395)
T ss_pred CCCCHHHCCCCCCCHHHHHC------CCHHHH-HHHHHHHHHHHH----HCCCHHHHHHHHHHHHHCCCCEEEEEECCEE
T ss_conf 54220104754422102224------310230-035422334323----0588889999999999738958998646602
Q ss_pred CCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHH---H--CCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCHHHH
Q ss_conf 524353637999988641797899186201244320---0--01232200235674045652256744898336205650
Q gi|254780349|r 182 TAYSRVWDWERFRSIADSIGAYLMADISHISGLVVG---G--QHPSPVPHCHIVTTTTHKSLRGPRGGLIMTNHADLAKK 256 (433)
Q Consensus 182 S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~---g--~~~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~ 256 (433)
|+=...-++++++.+|++++|++++|.+|-.|++-. | .+-+=++-.||+|+|--|-|.|.-||.--.++ |+-+-
T Consensus 183 SMDG~iA~L~~i~~LA~~Y~ALv~~DecHA~GflG~~GRG~~E~~gv~g~vdI~tgTLGKAlGGA~GGfTta~~-evv~l 261 (395)
T TIGR01822 183 SMDGTIAPLDEICDLADKYDALVMVDECHATGFLGATGRGTAELLGVMGRVDIITGTLGKALGGASGGFTTARK-EVVEL 261 (395)
T ss_pred ECCCCEECHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCEEEEECCHHHHHCCCCCCCCCCCH-HHHHH
T ss_conf 06873107678999998559878874433423327899861421376752577405433451145676437746-79998
Q ss_pred CCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHH
Q ss_conf 16646543223445566689999999973564899999999888999999861685233458889812631665567679
Q gi|254780349|r 257 INSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGK 336 (433)
Q Consensus 257 i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~ 336 (433)
+..--=|.+-||...-.|.|-++...|++. .-.+.-.+..+|+|.+-+.|.+.||+|-. ++.-++-|=|-+-.+. +
T Consensus 262 LRQRsRPYLFSNslpP~vvga~~~vl~~l~-~s~~l~~~L~~n~~~FR~~m~AaGFd~~p--~~hpI~pvMlyDA~~A-q 337 (395)
T TIGR01822 262 LRQRSRPYLFSNSLPPAVVGASIKVLDMLE-GSNELRDRLAENTRYFRERMEAAGFDVKP--AEHPIIPVMLYDAKLA-Q 337 (395)
T ss_pred HHHCCCCCCHHCCCCHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCCCCEEEECCCHHHH-H
T ss_conf 531265110004630689999999999984-20579999999999878753424740178--9885102321147899-9
Q ss_pred HHHHHHHHCCEEEECCCCCCCCCCCCCCCC---CCCCCHHHH
Q ss_conf 999988856718803789989999888985---122466673
Q gi|254780349|r 337 RAESILGRVSITCNKNSIPFDPESPFITSG---IRLGTPSGT 375 (433)
Q Consensus 337 ~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sG---iRlGT~aiT 375 (433)
+.++.|-+-||.|==-.- |.+|-| ||+=-+|.=
T Consensus 338 ~~A~~Ll~~GiYv~GFfY------PVVPKGqARIRvQ~SA~H 373 (395)
T TIGR01822 338 RFAERLLEEGIYVIGFFY------PVVPKGQARIRVQISAVH 373 (395)
T ss_pred HHHHHHHHCCEEEEEEEE------CCCCCCCCEEEEEECCCC
T ss_conf 999999877928997452------643788612444102568
No 164
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.50 E-value=1.5e-10 Score=93.94 Aligned_cols=306 Identities=19% Similarity=0.237 Sum_probs=200.2
Q ss_pred HCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHH
Q ss_conf 3888104301--02989999830510288657988875336006799999999999998718863010000167999999
Q gi|254780349|r 34 DEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGV 111 (433)
Q Consensus 34 ~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av 111 (433)
+-|+|--++- .+.|.+.+|+---+.+- .=||| |+--++.+.|-.-..+|-.=-+..+.. +-..+...+.-.+
T Consensus 26 DvlPmWVADMDf~~pp~i~~Al~~rvdhG-vfGY~----~~~~~~~~ai~~w~~~r~~~~i~~e~i-~~~p~VVpgi~~~ 99 (388)
T COG1168 26 DVLPMWVADMDFPTPPEIIEALRERVDHG-VFGYP----YGSDELYAAIAHWFKQRHQWEIKPEWI-VFVPGVVPGISLA 99 (388)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHCC-CCCCC----CCCHHHHHHHHHHHHHHCCCCCCCCEE-EECCCCHHHHHHH
T ss_conf 84134320046788879999999998658-77887----887789999999999713777885528-9837512769999
Q ss_pred HHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CC--
Q ss_conf 99831548748812334484111476654333332201366583235659899999998604667897055243--53--
Q gi|254780349|r 112 FLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RV-- 187 (433)
Q Consensus 112 ~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~-- 187 (433)
..++++|||.|+..+....-- -..+...++..-..|...+...+.||++++++.+...++|+.|+...-.| |.
T Consensus 100 I~~~T~~gd~Vvi~tPvY~PF---~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt 176 (388)
T COG1168 100 IRALTKPGDGVVIQTPVYPPF---YNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWT 176 (388)
T ss_pred HHHHCCCCCEEEECCCCCHHH---HHHHHHCCCEEEECCCCCCCCCEEECHHHHHHHHHCCCCCEEEEECCCCCCCCCCC
T ss_conf 998376998269648886189---99875169679746643469847752999999984377608999379999986436
Q ss_pred -CCHHHHHHHHHHCCCEEEECCCCHHHHHHHH-CCCCC--CC--CCC--EEEECCCCCC--CCCCCEEEEECCCCHHHHC
Q ss_conf -6379999886417978991862012443200-01232--20--023--5674045652--2567448983362056501
Q gi|254780349|r 188 -WDWERFRSIADSIGAYLMADISHISGLVVGG-QHPSP--VP--HCH--IVTTTTHKSL--RGPRGGLIMTNHADLAKKI 257 (433)
Q Consensus 188 -~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g-~~~~P--l~--~AD--vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i 257 (433)
-++.++.+||.++|.+++.|.=|. -||-.| .|..+ +. .|| ++.+|.-||| +|-+.+.++.-++++-.+.
T Consensus 177 ~eeL~~i~elc~kh~v~VISDEIHa-Dlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~ 255 (388)
T COG1168 177 KEELRKIAELCLRHGVRVISDEIHA-DLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKF 255 (388)
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCC-CCCCCCCCCCCHHHCCHHHHCCEEEEEECCCCCCCHHHHHEEEEECCHHHHHHH
T ss_conf 9999999999998399898303356-612169876654326955432359984052215604444214783488999999
Q ss_pred CHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-HHHHHHHHHHHC--CCCCCC-CCCCCCEEEECCCCCCC
Q ss_conf 66465432234455666899999999735648999999998-889999998616--852334-58889812631665567
Q gi|254780349|r 258 NSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVL-NSQALAKKLQFL--GFDIVS-GGTDNHLMLVDLRSKRM 333 (433)
Q Consensus 258 ~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~-NA~~La~~L~~~--G~~vv~-ggTd~H~vlvdl~~~~~ 333 (433)
.+.+--..+++|-.--+.|.-+|+.+ ..+|-++-.+.++ |-+.+++.|.+. |+++.- .| |=++|+|+|..++
T Consensus 256 ~~~l~~~~~~~~n~lg~~A~~aAY~~--G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~g--TYL~WLD~r~l~l 331 (388)
T COG1168 256 LKRLKRNGLHGPSALGIIATEAAYNQ--GEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQG--TYLAWLDCRELGL 331 (388)
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC--CEEEEEECCCCCC
T ss_conf 99998733799846889999999972--6499999999999989999999986598747866887--5666532002389
Q ss_pred CH-HHHHHHHHHCCEEEECCC
Q ss_conf 67-999998885671880378
Q gi|254780349|r 334 TG-KRAESILGRVSITCNKNS 353 (433)
Q Consensus 334 ~G-~~a~~~Le~~gI~~Nkn~ 353 (433)
+. .-.+-.|+++++.+|.-.
T Consensus 332 ~d~~l~~~ll~~akVal~~G~ 352 (388)
T COG1168 332 DDSELAEFLLEEAKVALSPGS 352 (388)
T ss_pred CHHHHHHHHHHHHCEECCCCC
T ss_conf 857899999975157135787
No 165
>PRK06575 consensus
Probab=99.49 E-value=3.8e-10 Score=91.16 Aligned_cols=357 Identities=13% Similarity=0.100 Sum_probs=194.0
Q ss_pred HHHHHHHHHCHHHHHHHHHH-HHHH---HHCCCCCCC-CCC-CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 77646978589999999999-9999---838881043-010-29899998305102886579888753360067999999
Q gi|254780349|r 9 FFQQSLIESDPDVFSLIGQE-SCRQ---NDEIQLIAS-ENI-VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIEN 82 (433)
Q Consensus 9 ~~~~~l~~~Dpei~~~i~~e-~~rq---~~~l~LiAS-EN~-~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~ 82 (433)
.+++.+....|.....+.++ .+++ ++-|+|-.. =.+ +++.+++++.-.+.+-. -| |.-.+-..++-+
T Consensus 3 ~~~~r~~~~~~s~~~~i~~~a~~l~~~G~dvi~L~iG~pdf~~p~~i~~a~~~a~~~g~-~~------Y~~~~G~~~Lr~ 75 (399)
T PRK06575 3 IISTRLNSIKPSPTLAVVKKTLELKKAGVDIIALGAGEPDFDTPDNIKEAAIKAIKDGF-TK------YTNVEGMPLLKQ 75 (399)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CC------CCCCCCCHHHHH
T ss_conf 78999872894899999999999997799837788958999969999999999985599-98------899878399999
Q ss_pred HHHHHHHHHCCCCC--EECCCHHH-HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC
Q ss_conf 99999998718863--01000016-799999999831548748812334484111476654333332201366583-235
Q gi|254780349|r 83 IAIERAKKLFNVNF--VNVQSHSG-SQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRK-EDG 158 (433)
Q Consensus 83 la~~~a~~lF~a~~--anvqp~SG-~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~-~~~ 158 (433)
-..+..++-+|.+. -||-..+| ..|-..++.++++|||.|+..+....++.. .+... ....+.++.+. .+.
T Consensus 76 aia~~~~~~~~~~~~~d~i~vt~G~~~al~~~~~~l~~pGD~Vli~~P~y~~y~~---~~~~~--~~~~v~~~~~~e~~~ 150 (399)
T PRK06575 76 AIKDKFKRENNIDYELDEIIVSTGGKQVIYNLFMASLDKGDEVIIPAPYWVSYPD---MVALS--TGTPVFVNCGIENNF 150 (399)
T ss_pred HHHHHHHHHHCCCCCHHEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCHHH---HHHHH--CCEEEEECCCCCCCC
T ss_conf 9999999985899984319994895289999999865899989974785323589---99982--885699415755465
Q ss_pred CCCHHHHHHHHHHHCCCEEEEECCCCC--CCC---CHHHHHHHHHHCC-CEEEECCCCHHHHHHHH-CCCCCCCC----C
Q ss_conf 659899999998604667897055243--536---3799998864179-78991862012443200-01232200----2
Q gi|254780349|r 159 LLDMHEIESLAIEYNPKLIIVGGTAYS--RVW---DWERFRSIADSIG-AYLMADISHISGLVVGG-QHPSPVPH----C 227 (433)
Q Consensus 159 ~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~---d~~~l~eIa~~~g-a~l~~D~aH~~GLIa~g-~~~~Pl~~----A 227 (433)
.+|.|++++.+ ..+.|+|++.....| +.+ .++++.++|.+++ .+++.|..|- .++-.| .|.+.... .
T Consensus 151 ~~d~e~l~~~~-~~~~k~iil~nP~NPTG~v~~~eel~~i~~~~~k~~~v~iisDEiY~-~~~~~~~~~~s~~~~~~~~~ 228 (399)
T PRK06575 151 KLSAEALERSI-TDKTKWLIINSPSNPTGASYNFEELENIAKVLRKYPHVNVMSDDIYE-HITFDDFKFYTLAQIAPDLK 228 (399)
T ss_pred CCCHHHHHHHC-CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECHHHHH-HHCCCCCCCCCHHHHCCCCC
T ss_conf 55899998644-44767999899999988878899999999998745873784213566-64168987741133076542
Q ss_pred C--EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Q ss_conf 3--5674045652--25674489833620565016646543223445566689999999973564899999999888999
Q gi|254780349|r 228 H--IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQAL 303 (433)
Q Consensus 228 D--vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~L 303 (433)
+ |+..|.-|+| +|=|-|.+..++ ++.+++...--....+.+.+.+.|+.+ ++.. .....++.....-++-..+
T Consensus 229 ~~~i~~~s~SK~~~~~G~RiG~~~~~~-~~i~~~~~~~~~~~~~~~~~~q~aa~~-al~~-~~~~~~~~~~~~~~~r~~~ 305 (399)
T PRK06575 229 ERIFTVNGVSKAYSMTGWRIGYGAGSK-ALIKAMTIIQSQSTSNPCSISQMAAIE-ALNG-PQDYIKPNALNFQKKRDLA 305 (399)
T ss_pred CCEEEECCCCCCCCCCCCCEEEEECCH-HHHHHHHHHHHCCCCCCCHHHHHHHHH-HHHC-CHHHHHHHHHHHHHHHHHH
T ss_conf 232574142101478772337530879-999999999961567866899999999-9858-4778999999999999999
Q ss_pred HHHHHHC-CCCCCCCCCCCCEEEECCCCC----------CCCHHH-HHHHHHHCCEEEECCCCCCCCCCCC-CCCCCCCC
Q ss_conf 9998616-852334588898126316655----------676799-9998885671880378998999988-89851224
Q gi|254780349|r 304 AKKLQFL-GFDIVSGGTDNHLMLVDLRSK----------RMTGKR-AESILGRVSITCNKNSIPFDPESPF-ITSGIRLG 370 (433)
Q Consensus 304 a~~L~~~-G~~vv~ggTd~H~vlvdl~~~----------~~~G~~-a~~~Le~~gI~~Nkn~iP~D~~~~~-~~sGiRlG 370 (433)
.+.|.+. |+.+.. -.-+-.+|+|+... ..+..+ ++..|+++||.+. ||. .| ...-+||.
T Consensus 306 ~~~l~~~~~~~~~~-P~G~~yl~~~~~~~~~~~~~~~~~~~~~~~f~~~Ll~e~~V~v~----PG~---~FG~~g~~Rl~ 377 (399)
T PRK06575 306 LSILKRVKYFECYK-PEGAFYLFVKCDKIFGHKTKSGKIIANSNDFAEYLLEEAKVAVV----PGI---AFGLEGYFRIS 377 (399)
T ss_pred HHHHHHCCCCEEEC-CCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEE----CCC---CCCCCCEEEEE
T ss_conf 99986479844617-99237995777300154443467678999999999972999998----485---55899839999
Q ss_pred CHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 66673079998999999999999960
Q gi|254780349|r 371 TPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 371 T~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
-. ...+++++-.+-|.++++
T Consensus 378 ~a------~~~e~l~ea~~Rl~~a~~ 397 (399)
T PRK06575 378 YA------TSMEELEEACIRIERACN 397 (399)
T ss_pred EC------CCHHHHHHHHHHHHHHHH
T ss_conf 73------989999999999999997
No 166
>pfam00282 Pyridoxal_deC Pyridoxal-dependent decarboxylase conserved domain.
Probab=99.48 E-value=5.4e-12 Score=104.02 Aligned_cols=235 Identities=12% Similarity=0.111 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCC--------EECCCHHHHHHHHHHHHHHHC-----------CCCEEEECCCCCCCCCCCC
Q ss_conf 799999999999998718863--------010000167999999998315-----------4874881233448411147
Q gi|254780349|r 76 YVDDIENIAIERAKKLFNVNF--------VNVQSHSGSQMNQGVFLALMH-----------PGDSFMGLSLDSGGHLTHG 136 (433)
Q Consensus 76 ~~d~iE~la~~~a~~lF~a~~--------anvqp~SG~~An~av~~ALl~-----------pGD~Il~~~l~~GGHlshg 136 (433)
-.-+||+.+++-.+++||..- .-+=..+||.||+..+.+--. +.++.. +=.....|.|..
T Consensus 76 a~t~lE~~vi~wl~~l~g~p~~~~~~~~~~G~~tsGgs~anl~al~~AR~~~~~~~~~~g~~~~~~v-i~~S~~aH~Sv~ 154 (370)
T pfam00282 76 ACTELENVVMDWLAKMLGLPKEFLGSGQGGGVLQGGSSESNLLALLAARTKWIRRMKAAGKPLGKLV-AYTSDQAHSSIE 154 (370)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE-EEECCCCHHHHH
T ss_conf 6899999999999999668644416888864873647899999999999999998764179868749-997663279999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC-----CCEEE--EECCCCCCCCCHHHHHHHHHHCCCEEEECCC
Q ss_conf 6654333332201366583235659899999998604-----66789--7055243536379999886417978991862
Q gi|254780349|r 137 SSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYN-----PKLII--VGGTAYSRVWDWERFRSIADSIGAYLMADIS 209 (433)
Q Consensus 137 ~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~k-----PklIi--~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~a 209 (433)
+...+.|...+.+ ++|+ ++.+|.+++++.+++.+ |-+|+ +|.+...-.-|++++.+||++.|.++++|+|
T Consensus 155 Kaa~~lGlg~~~V--~~d~-~~~m~~~~L~~~i~~~~~~g~~p~~VvataGTT~tGaiD~l~~i~~i~~~~~lWlHVDaA 231 (370)
T pfam00282 155 KAALIAGVELREI--PTDE-NGKMRGMDLEKAIEEDKENGLIPFFVCATLGTTGSGAFDPLQELGDICNKYDLWLHVDAA 231 (370)
T ss_pred HHHHHCCCCCEEE--EECC-CCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEHH
T ss_conf 9999749983695--3689-888299999999999986799744999863771771347899999999983980884233
Q ss_pred CHHHHHHHHCCCC---CCCCCCEEEECCCCCCCCCCC-EEEEECCCCHHHHCCHHHCHHHH-----------------HH
Q ss_conf 0124432000123---220023567404565225674-48983362056501664654322-----------------34
Q gi|254780349|r 210 HISGLVVGGQHPS---PVPHCHIVTTTTHKSLRGPRG-GLIMTNHADLAKKINSAIFPGLQ-----------------GG 268 (433)
Q Consensus 210 H~~GLIa~g~~~~---Pl~~ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~i~~avfPg~q-----------------g~ 268 (433)
+-........+.+ -++.||-++...||.|.-|-+ |++++|+++...+.- +.-+.+. .+
T Consensus 232 ~GG~~~l~~~~r~~~~gie~aDSi~~d~HK~l~~P~~~s~~l~rd~~~l~~~~-~~~a~Yl~~~~~~~~~d~~~~t~~~s 310 (370)
T pfam00282 232 YAGSAFICPEFRHWLFGIERADSFSFNPHKWMLVLLDCSALWVRDKGALQQAL-QFNPEYLGHTDSDVAVDYGDWQIPLS 310 (370)
T ss_pred HHHHHHHCHHHHHHHCCCCCCCEEEECCHHCCCCCCCEEEEEEECHHHHHHHH-CCCHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 33478829855777569877857977805501878875899994879988986-56937748877677788677777899
Q ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCC
Q ss_conf 4556668999999997356489999999988899999986168-52334
Q gi|254780349|r 269 PFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLG-FDIVS 316 (433)
Q Consensus 269 ~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G-~~vv~ 316 (433)
-. .+...+=.+++..-...|+++.++.++.|+.|++.+.+.+ |++++
T Consensus 311 Rr-~~alk~W~~l~~~G~~g~~~~i~~~~~lA~~~~~~i~~~~~fEl~~ 358 (370)
T pfam00282 311 RR-FRILKLWFVLRSYGVEGLQNQIRRHVELAKYFEALVRKDSRFEICA 358 (370)
T ss_pred CC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 63-3099999999999999999999999999999999985099979955
No 167
>PRK09147 aminotransferase; Provisional
Probab=99.46 E-value=3.1e-10 Score=91.81 Aligned_cols=352 Identities=14% Similarity=0.097 Sum_probs=193.9
Q ss_pred HHHHHHHCHHHHHHHHHHHHHHH-----HCCCCCCCC--CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 64697858999999999999998-----388810430--10298999983051028865798887533600679999999
Q gi|254780349|r 11 QQSLIESDPDVFSLIGQESCRQN-----DEIQLIASE--NIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENI 83 (433)
Q Consensus 11 ~~~l~~~Dpei~~~i~~e~~rq~-----~~l~LiASE--N~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~l 83 (433)
|..++...|-.+.-|.+....++ +-|+|--.| --+++.|++++...+..+. + |+-.+-..++-+-
T Consensus 2 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vI~L~iG~Pd~~~P~~v~~a~~~a~~~~~--~------Y~~~~G~~~LRea 73 (397)
T PRK09147 2 NPRLDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEPKHPTPAFVRDALAANLDGLA--V------YPTTAGLPALRQA 73 (397)
T ss_pred CCCHHHCCCCHHHHHHHHHHHCHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCC--C------CCCCCCCHHHHHH
T ss_conf 9556348998899999998504013899858764888999978999999999862877--8------9999784999999
Q ss_pred HHHHHHHHCCCC---C-EECCCHHHHH-HHHHHHHHHHCCCCE---EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999999871886---3-0100001679-999999983154874---8812334484111476654333332201366583
Q gi|254780349|r 84 AIERAKKLFNVN---F-VNVQSHSGSQ-MNQGVFLALMHPGDS---FMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRK 155 (433)
Q Consensus 84 a~~~a~~lF~a~---~-anvqp~SG~~-An~av~~ALl~pGD~---Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~ 155 (433)
..+..++-||.. . .+|-+.+|++ |...++.+++.|||. |+..+...-.+.. .....| -+.+.++.++
T Consensus 74 ia~~~~~~~g~~~~~~~~~v~vt~Ga~~al~~~~~a~l~~gd~g~~Vl~~~P~Y~~y~~---~~~~~G--~~~v~vp~~~ 148 (397)
T PRK09147 74 IARWLERRYGLPAVDPATQVLPVNGSREALFAFAQTVIDRSDPGPLVVCPNPFYQIYEG---AALLAG--AEPYFLNCDP 148 (397)
T ss_pred HHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHH---HHHHCC--CEEEEECCCC
T ss_conf 99999987099867857469988882899999998605888988889968887877499---999769--8689923571
Q ss_pred CC-CCCCHHHHHHHHHHHCCCEEEEECCCCC--C---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCC--CC--
Q ss_conf 23-5659899999998604667897055243--5---3637999988641797899186201244320001232--20--
Q gi|254780349|r 156 ED-GLLDMHEIESLAIEYNPKLIIVGGTAYS--R---VWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSP--VP-- 225 (433)
Q Consensus 156 ~~-~~ID~d~~~~~a~~~kPklIi~G~S~y~--~---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~P--l~-- 225 (433)
++ ..+|+|++++.+. .|+|+|++-....| + .-+++++.++|+++|.+++.|..|- .|+-.+.++.+ +.
T Consensus 149 e~~~~~d~~~l~~~i~-~~tk~iil~sP~NPTG~v~s~e~l~~l~~la~~~~i~iisDEiY~-~l~~d~~~~p~~~~~~~ 226 (397)
T PRK09147 149 ANGFAPDFDAVPAEVW-ARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYS-EIYFDEAAPPLGLLEAA 226 (397)
T ss_pred CCCCCCCHHHHHHHHH-HCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCC-CCEECCCCCCHHHHHHH
T ss_conf 2277769789898731-127489868998988998888999999996324728999826865-21547987981577777
Q ss_pred -------CCC-EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
Q ss_conf -------023-5674045652--256744898336205650166465432234455666899999999735648999999
Q gi|254780349|r 226 -------HCH-IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQ 295 (433)
Q Consensus 226 -------~AD-vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~q 295 (433)
+.. |+.+|.-|+| +|=|-|.|..+. ++.+++....--...+.+...+.|+.+ ++.. +....+-.+.
T Consensus 227 ~~~~~~~~~~~I~~~S~SK~~~~~G~RiG~i~~~~-~li~~~~~~~~~~~~~~~~~~q~A~~a-a~~~--~~~~~~~r~~ 302 (397)
T PRK09147 227 AELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDA-ALLKKFLLYRTYHGCAMPPQVQLASIA-AWND--EAHVRENRAL 302 (397)
T ss_pred HHHCCCCCCCEEEECCCCCCCCCCCCCEEEEECCH-HHHHHHHHHHHHHHCCCCHHHHHHHHH-HHCC--CHHHHHHHHH
T ss_conf 76265656868998157210367665258886899-999999997354222578999999999-8568--3679999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCC-CCCCCCEEEECCCCCCCCHHH-HHHHHHHCCEEEECCCCCCC---CCC-CCC--CCCC
Q ss_conf 998889999998616852334-588898126316655676799-99988856718803789989---999-888--9851
Q gi|254780349|r 296 IVLNSQALAKKLQFLGFDIVS-GGTDNHLMLVDLRSKRMTGKR-AESILGRVSITCNKNSIPFD---PES-PFI--TSGI 367 (433)
Q Consensus 296 vv~NA~~La~~L~~~G~~vv~-ggTd~H~vlvdl~~~~~~G~~-a~~~Le~~gI~~Nkn~iP~D---~~~-~~~--~sGi 367 (433)
..++-..+.+.|.+ .+++.. .|+ =.+|+|+.. .+..+ +.+.|++.|+.+. ||- ... ... ..=+
T Consensus 303 ~~~r~~~~~~~l~~-~~~~~~P~gg--~ylw~~~~~--~~~~~f~~~Ll~~~gV~v~----PGs~F~~~~~g~~~G~g~v 373 (397)
T PRK09147 303 YREKFDAVTPILAP-VLDVQLPDAG--FYLWAKVPG--GDDTAFARRLYADYNVTVL----PGSYLAREAHGVNPGAGRV 373 (397)
T ss_pred HHHHHHHHHHHHHC-CCCCCCCCEE--EEEEEECCC--CCHHHHHHHHHHHCCEEEE----CCCCCCCCCCCCCCCCCEE
T ss_conf 99999999998733-7987788973--599886899--9989999999996899998----6810042334788899889
Q ss_pred CCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 22466673079998999999999999960
Q gi|254780349|r 368 RLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 368 RlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
||.-. ..++++.+-.+-|.+.|+
T Consensus 374 Rl~~a------~~~e~l~eal~Rl~~~l~ 396 (397)
T PRK09147 374 RIALV------APLAECVEAAERIVDFLR 396 (397)
T ss_pred EEEEC------CCHHHHHHHHHHHHHHHC
T ss_conf 99974------989999999999999972
No 168
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.45 E-value=3.7e-11 Score=98.21 Aligned_cols=294 Identities=18% Similarity=0.205 Sum_probs=196.8
Q ss_pred CCCCCCCHHHHHHHHCCCCCCC---CC----CCCCCC---------C-CCCCHHHHHHHHHHHHHHHHHCCCCCEECCCH
Q ss_conf 4301029899998305102886---57----988875---------3-36006799999999999998718863010000
Q gi|254780349|r 40 ASENIVSRAVLEAQGSILTNKY---AE----GYPSKR---------Y-YGGCQYVDDIENIAIERAKKLFNVNFVNVQSH 102 (433)
Q Consensus 40 ASEN~~S~~v~~~l~S~l~nky---ae----G~pg~r---------y-y~G~~~~d~iE~la~~~a~~lF~a~~anvqp~ 102 (433)
+.-|+.=-..+-.|||+-. || +| -+|+.. + .|-.+.++++ .+-.+++=|-+-+-.||-
T Consensus 58 s~kn~avd~~m~PLGSCTM-K~Np~~e~~~~~~p~f~~iHP~~pe~~vqG~l~li~~L----q~~L~~ITG~DavsLQP~ 132 (496)
T COG1003 58 SQKDLAVDRGMIPLGSCTM-KLNPKAEMKPATWPEFANIHPFQPEEQVQGYLELIYEL----QEWLKEITGMDAVSLQPN 132 (496)
T ss_pred HHCCCCCCCCCCCCCCCCC-CCCCHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHH----HHHHHHHCCCCEEECCCC
T ss_conf 7514352347617764521-55841211222460044249999868889999999999----999997409762640678
Q ss_pred HHHHHHHHHHHHH----HCC----CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 1679999999983----154----87488123344841114766543333322013665832356598999999986046
Q gi|254780349|r 103 SGSQMNQGVFLAL----MHP----GDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNP 174 (433)
Q Consensus 103 SG~~An~av~~AL----l~p----GD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kP 174 (433)
+|++--.+-+++. -.. -+.++..+-+||- .+.+...-+|+++..+.|+ +|.||+|.+++.+.+.--
T Consensus 133 AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGT-----NPASAam~G~~VV~V~~~~-~G~VDlddLk~k~~~~~A 206 (496)
T COG1003 133 AGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGT-----NPASAAMAGFKVVVVKCDE-NGNVDLDDLRAKAEDNLA 206 (496)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC-----CHHHHHHCCCEEEEEECCC-CCCCCHHHHHHHHCCCEE
T ss_conf 7764156789999999997588777679831655689-----8656765485599983289-887169999987413115
Q ss_pred CEEEEECCCC-CCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCCCCCCCCCCE------EE
Q ss_conf 6789705524-353637999988641797899186201244320001232200-235674045652256744------89
Q gi|254780349|r 175 KLIIVGGTAY-SRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTHKSLRGPRGG------LI 246 (433)
Q Consensus 175 klIi~G~S~y-~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKtl~GPrgG------iI 246 (433)
.+-|--.|.. .|.-++.++++|.++.|+.|.+|.|..-++|. -. .|=+. +||+-..-||||..|+|| =|
T Consensus 207 alMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG-~~--rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPv 283 (496)
T COG1003 207 ALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVG-LA--RPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPV 283 (496)
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHC-CC--CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCE
T ss_conf 8886168645450451999999999729989844754352522-55--66556563577522311025888899987760
Q ss_pred EECCCCHHHHCCH-------H--H----CH---HHHHHH-HHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHH
Q ss_conf 8336205650166-------4--6----54---322344-55666899999999735648-9999999988899999986
Q gi|254780349|r 247 MTNHADLAKKINS-------A--I----FP---GLQGGP-FMHSIAAKAVAFGEALSSEF-RDYAKQIVLNSQALAKKLQ 308 (433)
Q Consensus 247 ~~~~~e~~~~i~~-------a--v----fP---g~qg~~-~~~~iaa~aval~Ea~~~~f-~~Ya~qvv~NA~~La~~L~ 308 (433)
-.+. ++..-+-. . . -+ |....+ =...|--++.+..-++-+++ +.-.+.-|-||+.|++.|.
T Consensus 284 gVk~-~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~ 362 (496)
T COG1003 284 GVKA-HLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLK 362 (496)
T ss_pred EHHH-HCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 2585-512338987334777530036787764226514557616899999999987577888989999984799999754
Q ss_pred HCCCCCCCCCC--CCCEEEECCC----CCCCCHHHHHHHHHHCCEEE
Q ss_conf 16852334588--8981263166----55676799999888567188
Q gi|254780349|r 309 FLGFDIVSGGT--DNHLMLVDLR----SKRMTGKRAESILGRVSITC 349 (433)
Q Consensus 309 ~~G~~vv~ggT--d~H~vlvdl~----~~~~~G~~a~~~Le~~gI~~ 349 (433)
. .|+|...+- --|-+++|.+ +.|++..+++++|-..|+-.
T Consensus 363 ~-~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHa 408 (496)
T COG1003 363 G-YYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGFHA 408 (496)
T ss_pred H-CCCCCCCCCCCCEEEEEEECHHHHHHCCCCHHHHHHHHHHCCCCC
T ss_conf 0-275554788761158996056667642983899999987258888
No 169
>KOG2862 consensus
Probab=99.45 E-value=4.4e-10 Score=90.75 Aligned_cols=328 Identities=17% Similarity=0.151 Sum_probs=219.0
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC--CEECCCHHHHHHHHHHHHH
Q ss_conf 81043010298999983051028865798887533600679999999999999871886--3010000167999999998
Q gi|254780349|r 37 QLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVN--FVNVQSHSGSQMNQGVFLA 114 (433)
Q Consensus 37 ~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~--~anvqp~SG~~An~av~~A 114 (433)
-|+|.-..+|+.|++|+ ++..+||-..-++ .|-.-..|-.+..|... +.-|=+-||+.+.-+++.-
T Consensus 20 L~gPGPsnl~~~V~~A~-----~~~~lgh~sPe~~-------qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N 87 (385)
T KOG2862 20 LLGPGPSNLSGRVQEAM-----SRPSLGHMSPEFV-------QIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVN 87 (385)
T ss_pred EECCCCCCCCHHHHHHH-----CCCCCCCCCHHHH-------HHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHH
T ss_conf 55578767877899850-----6776566787899-------99999998789984047896289836984168998875
Q ss_pred HHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEE--ECCCCCCCCC-HH
Q ss_conf 31548748812334484111476654333332201366583235659899999998604667897--0552435363-79
Q gi|254780349|r 115 LMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIV--GGTAYSRVWD-WE 191 (433)
Q Consensus 115 Ll~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~--G~S~y~~~~d-~~ 191 (433)
+++|||+|+......-||. ..-.....++++.....|. -+-+..+++++.+.+++|++|++ |-|+..-.-| .+
T Consensus 88 ~lePgd~vLv~~~G~wg~r---a~D~~~r~ga~V~~v~~~~-G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~ 163 (385)
T KOG2862 88 LLEPGDNVLVVSTGTWGQR---AADCARRYGAEVDVVEADI-GQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLA 163 (385)
T ss_pred HCCCCCEEEEEEECHHHHH---HHHHHHHHCCEEEEEECCC-CCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHH
T ss_conf 2578974999972337778---8999986086555871585-56754999999987158745999834764111155788
Q ss_pred HHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCC--C--CCEEEECCCCCCCCCCCEEEEECCCC---------------
Q ss_conf 9998864179789918620124432000123220--0--23567404565225674489833620---------------
Q gi|254780349|r 192 RFRSIADSIGAYLMADISHISGLVVGGQHPSPVP--H--CHIVTTTTHKSLRGPRGGLIMTNHAD--------------- 252 (433)
Q Consensus 192 ~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~--~--ADvvt~sTHKtl~GPrgGiI~~~~~e--------------- 252 (433)
.+.++|++++|++++|.--.+| |. ||. + .||..+.+.|.|.+|.|=-|+|-.+.
T Consensus 164 ~~g~lc~k~~~lllVD~VaSlg----gt---~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~ 236 (385)
T KOG2862 164 ISGELCHKHEALLLVDTVASLG----GT---EFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSF 236 (385)
T ss_pred HHHHHHHCCCEEEEEECHHHCC----CC---CCEEHHHCCCEEEECCHHHCCCCCCCCEEECCHHHHHHHHHCCCCCEEE
T ss_conf 8878740678189972022147----86---4112110650788424343079998560323888999986145775489
Q ss_pred HHHHCCHHHCHHHHHH-------HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCCE
Q ss_conf 5650166465432234-------45566689999999973564899999999888999999861685233458--88981
Q gi|254780349|r 253 LAKKINSAIFPGLQGG-------PFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGG--TDNHL 323 (433)
Q Consensus 253 ~~~~i~~avfPg~qg~-------~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~gg--Td~H~ 323 (433)
|+.-++..-|+|.-+- |-...+-++-.||.+..++.-++--+|--++++.|-..|.+.|+....-. --+--
T Consensus 237 yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlpt 316 (385)
T KOG2862 237 YFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPT 316 (385)
T ss_pred EEEHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHCCCC
T ss_conf 98677610320558863511168848999999999999999878999999999999999999984861021376452675
Q ss_pred EE-ECCCCCCCCHHHHHHHHHH-CCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 26-3166556767999998885-67188037899899998889851224666730799989999999999999602
Q gi|254780349|r 324 ML-VDLRSKRMTGKRAESILGR-VSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 324 vl-vdl~~~~~~G~~a~~~Le~-~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
+- |.+ +.++|++++...+-+ -++...- --.|..+--+||| ++-..-.-+-|+.+-++|..+|..
T Consensus 317 vttv~v-p~gvDw~dVv~~~~~~~~vei~g------glg~~~gKv~RIG---l~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862 317 VTTVKV-PYGVDWKDVVAYAMSHYVVEIGG------GLGPTVGKVFRIG---LLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred CEEEEC-CCCCCHHHHHHHHHHHCCEEECC------CCCCCCCCEEEEE---EEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 025654-77788799999998716778614------6677756289998---751157728999999999999864
No 170
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.44 E-value=5.1e-10 Score=90.28 Aligned_cols=314 Identities=18% Similarity=0.222 Sum_probs=198.3
Q ss_pred HHHCCCCCCCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH-HH
Q ss_conf 9838881043010--29899998305102886579888753360067999999999999987188630100001679-99
Q gi|254780349|r 32 QNDEIQLIASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQ-MN 108 (433)
Q Consensus 32 q~~~l~LiASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~-An 108 (433)
..+.|.|-+.||. +||.|++++...+... -++|...++-+-.|. ..+.+|.+.-+|-...|+. +-
T Consensus 23 ~~~ii~L~~NEnP~gpsp~v~~a~~~~~~~~-------~~~YPd~~~~~Lr~~-----iA~~~gv~~~~I~vg~Gs~e~i 90 (353)
T PRK05387 23 LANLIKLNTNENPYPPSPKVLEAIRAALGDD-------LRLYPDPDATALRQA-----IAAYYGVSPEQVFVGNGSDEVL 90 (353)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHHH-------HCCCCCCCHHHHHHH-----HHHHHCCCHHHEEECCCHHHHH
T ss_conf 9984794097999999999999999967525-------247999978999999-----9999786858899857899999
Q ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--C
Q ss_conf 99999831548748812334484111476654333332201366583235659899999998604667897055243--5
Q gi|254780349|r 109 QGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--R 186 (433)
Q Consensus 109 ~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~ 186 (433)
..++.++++|||+|+..+...+.+-. .....|..+..+ +++ ++..+|.+++.+ ..+.|++.....| .
T Consensus 91 ~~~~~~~~~~gd~Vl~p~Pty~~Y~~---~a~~~g~~~~~v--p~~-~~~~~~~~~~~~-----~~~~v~l~nPnNPTG~ 159 (353)
T PRK05387 91 AHAFLAFFKHDRPLLFPDITYSFYPV---YAGLYGIPYEEV--PLD-DDFSIDVEDYLR-----PNGGIIFPNPNAPTGI 159 (353)
T ss_pred HHHHHHHHCCCCEEEECCCCCHHHHH---HHHHCCCEEEEE--ECC-CCCCCCHHHHHC-----CCCEEEEECCCCCCCC
T ss_conf 99999961899866407877036999---999809548995--056-434579999726-----3676998489998788
Q ss_pred CCCHHHHHHHHHHC-CCEEEECCCCHHHHHHHHCCCCCCCC----CC-EEEECCCCC--CCCCCCEEEEECCCCHHHHCC
Q ss_conf 36379999886417-97899186201244320001232200----23-567404565--225674489833620565016
Q gi|254780349|r 187 VWDWERFRSIADSI-GAYLMADISHISGLVVGGQHPSPVPH----CH-IVTTTTHKS--LRGPRGGLIMTNHADLAKKIN 258 (433)
Q Consensus 187 ~~d~~~l~eIa~~~-ga~l~~D~aH~~GLIa~g~~~~Pl~~----AD-vvt~sTHKt--l~GPrgGiI~~~~~e~~~~i~ 258 (433)
.++.+.+.+++.+. ++++++|.|-+ -+. + .++++. -+ ||.-|.-|+ |+|=|=|.++++. ++.+.++
T Consensus 160 ~~~~~~l~~ll~~~~~~~vvvDEAY~-ef~--~--~s~~~l~~~~~nlivlrTfSK~~glaGlRlGy~ia~~-~li~~l~ 233 (353)
T PRK05387 160 ALPLADIERILAANPDSVVVIDEAYV-DFG--G--ESAIPLIDRYPNLLVVQTLSKSRSLAGLRVGFAIGHP-ELIEALE 233 (353)
T ss_pred CCCHHHHHHHHHHCCCCEEEEECCHH-HCC--C--CCHHHHHHCCCCEEEEEECCHHHCCCCCCCEEEECCH-HHHHHHH
T ss_conf 68999999999748998899605356-418--7--5402456507877876304163087766234210699-9999999
Q ss_pred HH--HCHHHHHHHHHHHHHHH-HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCH
Q ss_conf 64--65432234455666899-9999997356489999999988899999986168523345888981263166556767
Q gi|254780349|r 259 SA--IFPGLQGGPFMHSIAAK-AVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTG 335 (433)
Q Consensus 259 ~a--vfPg~qg~~~~~~iaa~-aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G 335 (433)
+. -|+ ....+.+|.. |++..+ -...+....+++...-+.|.+.|.+.||++.. ++..-+|++. .+.+.
T Consensus 234 ~~~~~~~----~~~v~~~a~~aa~aal~-d~~~~~~~~~~~~~~R~~l~~~L~~lg~~v~p--s~anFvl~~~--~~~~a 304 (353)
T PRK05387 234 RVKNSFN----SYPLDRLAQAGAIAAIE-DEAYFEETCAKVIATRERLVEELEALGFEVLP--SAANFVFARH--PQHDA 304 (353)
T ss_pred HHHHHCC----CCCCCHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC--CCCCEEEEEC--CCCCH
T ss_conf 9985416----77766999999999963-85999999999999999999999968987898--9885899989--99999
Q ss_pred HHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9999988856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 336 KRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 336 ~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
.+..+.|.+.||.+-...-|+ ...-+||... ..+||+.+-+.+.++|.
T Consensus 305 ~~~~~~L~~~gI~VR~~~~~~------l~~~iRisvg-------t~een~~l~~al~~il~ 352 (353)
T PRK05387 305 AALAAALRERGIIVRHFNKPR------IDQFLRITIG-------TDEECEALVDALKEILA 352 (353)
T ss_pred HHHHHHHHCCCEEEEECCCCC------CCCEEEEECC-------CHHHHHHHHHHHHHHHC
T ss_conf 999999980993999799899------9998999729-------99999999999999974
No 171
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.44 E-value=2.9e-11 Score=98.92 Aligned_cols=318 Identities=17% Similarity=0.178 Sum_probs=189.4
Q ss_pred CHHHHHHHH--CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE--CCCHHHHHHHHHHHHHHHC--CC
Q ss_conf 989999830--51028865798887533600679999999999999871886301--0000167999999998315--48
Q gi|254780349|r 46 SRAVLEAQG--SILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVN--VQSHSGSQMNQGVFLALMH--PG 119 (433)
Q Consensus 46 S~~v~~~l~--S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~an--vqp~SG~~An~av~~ALl~--pG 119 (433)
.|++..... +.|..-|.- ||-.--+|-.|.+-+. +...++|-|-+.+| .+|-+|+.|-.+.++.-.. ..
T Consensus 34 ~p~~v~~~~~r~ef~t~ytp-yq~E~sQG~Lq~~~e~----Qs~i~eLtGmdv~naSl~d~a~A~aEa~~ma~~~~~~~r 108 (398)
T cd00613 34 PPAVIKRNILENEFYTAYTP-YQPEISQGRLQALFEL----QTMLCELTGMDVANASLQDEATAAAEAAGLAAIRAYHKR 108 (398)
T ss_pred CHHHHHHHHCHHHHHHCCCC-CCHHHHHHHHHHHHHH----HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 38898987386767146999-8968869999999999----999999868883563268767799999999999862689
Q ss_pred CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC-CCCC-HHHHHHHH
Q ss_conf 748812334484111476654333332201366583235659899999998604667897055243-5363-79999886
Q gi|254780349|r 120 DSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS-RVWD-WERFRSIA 197 (433)
Q Consensus 120 D~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~-~~~d-~~~l~eIa 197 (433)
++|+..+..|+-...--.. -..+..++++..+.|+ ++.+|.|++++.... +-.-+++-...+. ...| ++++.+++
T Consensus 109 ~~vlv~~~~hp~~~~v~~t-~~~~~g~~i~~v~~~~-~G~~d~~~l~~~~~~-~~a~v~v~~Pn~~G~~e~~~~~i~~~~ 185 (398)
T cd00613 109 NKVLVPDSAHPTNPAVART-RGEPLGIEVVEVPSDE-GGTVDLEALKEEVSE-EVAALMVQYPNTLGVFEDLIKEIADIA 185 (398)
T ss_pred CEEEECCCCCCCHHHHHHH-HHHCCCCEEEEECCCC-CCCCCHHHHHHHCCC-CEEEEEECCCCCCEEEECCHHHHHHHH
T ss_conf 9899778778036999999-8612586589942666-777465888875078-859999527999627851999999999
Q ss_pred HHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCCCC-----CCCCCCEEEEECCCCHHHHCCH------------
Q ss_conf 41797899186201244320001232200-23567404565-----2256744898336205650166------------
Q gi|254780349|r 198 DSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTHKS-----LRGPRGGLIMTNHADLAKKINS------------ 259 (433)
Q Consensus 198 ~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKt-----l~GPrgGiI~~~~~e~~~~i~~------------ 259 (433)
++.|+++++|.+-.+ | +....|-++ |||+.+..||+ +.||..|++.+++ ++..++-.
T Consensus 186 h~~gal~~~~~~~~~-l---~~l~~Pg~~GaDI~~g~~q~~g~P~~~GGP~~G~~a~~~-~l~r~lPgrivg~t~D~~G~ 260 (398)
T cd00613 186 HSAGALVYVDGDNLN-L---TGLKPPGEYGADIVVGNLQKTGVPHGGGGPGAGFFAVKK-ELVRFLPGRLVGVTKDAEGN 260 (398)
T ss_pred HHCCCEEEEEECCHH-H---HCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHH-HHHHHCCCCEEEECCCCCCC
T ss_conf 875986999744035-3---155571004787798525114665666887443266799-87735899856504788887
Q ss_pred ------------------HHCHHHHHHHHHHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf ------------------46543223445566689999999973564-89999999988899999986168523345888
Q gi|254780349|r 260 ------------------AIFPGLQGGPFMHSIAAKAVAFGEALSSE-FRDYAKQIVLNSQALAKKLQFLGFDIVSGGTD 320 (433)
Q Consensus 260 ------------------avfPg~qg~~~~~~iaa~aval~Ea~~~~-f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd 320 (433)
|..-...+...+...|+.-++ .+-++ .++-+++.+.||+.|++.|.+.|+....++.-
T Consensus 261 ~~~~ltlqtreqhIrRekatsnict~qal~al~a~~Y~~---~lG~~GL~~va~~~~~~A~Yl~~~L~~~~~~~~~~~~~ 337 (398)
T cd00613 261 RAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIV---YLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPF 337 (398)
T ss_pred CCEEEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHH---HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
T ss_conf 421544135433367775288164327899999999999---84886388999999999999999998638982689986
Q ss_pred CCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf 981263166556767999998885671880378998999988898512246667307999899999999
Q gi|254780349|r 321 NHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGE 389 (433)
Q Consensus 321 ~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~ 389 (433)
-|-+.+++... .+... ..|.+.+|.-... +|.+. +..+..+=+-..|.++ .+|++.+++
T Consensus 338 f~EFvi~~~~~--~~~~~-~~l~k~~i~~G~~-~~~~y--~~~~~~lli~~TE~~s----kediD~l~~ 396 (398)
T cd00613 338 FHEFVLRLPPL--YGIRA-EDLAKALIDGGFH-APTMY--LPVDGTLMIEPTETET----KEELDALLE 396 (398)
T ss_pred EEEEEEECCCC--CCHHH-HHHHHHCCCCCCC-CCCCC--CCCCCEEEEEECCCCC----HHHHHHHHH
T ss_conf 66999976875--47689-9999736215828-66468--8889979998058999----999999997
No 172
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase; InterPro: IPR010961 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway . The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin . The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) . This entry represents 5-aminoaevulinic acid (ALA) synthase (2.3.1.37 from EC), which catalyses the first stage of tetrapyrrole biosynthesis by the C4 pathway, namely the condensation of succinyl CoA and glycine. ALA synthase is a pyridoxal-phosphate-dependent enzyme. During catalysis, glycine initially binds to the enzyme cofactor, and after condensation with succinyl CoA, CoA, carbon dioxide and 5-aminolevulinic acid are produced .; GO: 0003870 5-aminolevulinate synthase activity, 0030170 pyridoxal phosphate binding, 0033014 tetrapyrrole biosynthetic process.
Probab=99.43 E-value=1.8e-11 Score=100.36 Aligned_cols=318 Identities=24% Similarity=0.269 Sum_probs=200.9
Q ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 2989999830510288657988875336006-799999999999998718863010000167999999998315487488
Q gi|254780349|r 45 VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQ-YVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFM 123 (433)
Q Consensus 45 ~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~-~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il 123 (433)
-.|.|++|.--.+. ||-=|==|-|--+|+. +.=++|.- ...|=+=|-|=| --||..||.+++..|.+-==-++
T Consensus 61 qHp~Vl~Am~~~~~-~~GaGaGGTRNIsGtn~~~v~LEaE----LAdLH~KE~ALv-FtSgyVaNda~L~tL~k~~P~~~ 134 (427)
T TIGR01821 61 QHPKVLQAMHEALD-KVGAGAGGTRNISGTNIYHVELEAE----LADLHGKESALV-FTSGYVANDATLATLAKIIPGCV 134 (427)
T ss_pred CCHHHHHHHHHHHH-HCCCCCCCCCCCCCCCHHHHHHHHH----HHHHCCCCHHHH-HHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 86547988999999-6388998753656677789999999----975517311356-77889999999999998708858
Q ss_pred ECCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---HCCCEEEEECCCCCCCCCHH---HHHH
Q ss_conf 123344841114--766543333322013665832356598999999986---04667897055243536379---9998
Q gi|254780349|r 124 GLSLDSGGHLTH--GSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIE---YNPKLIIVGGTAYSRVWDWE---RFRS 195 (433)
Q Consensus 124 ~~~l~~GGHlsh--g~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~---~kPklIi~G~S~y~~~~d~~---~l~e 195 (433)
.+| +.+=|-|. |-+- +..=++++ .. -|.+.|++++.. .+||||.|. |+|+..-|+. +|.+
T Consensus 135 ifS-D~LNHASMI~GIr~---S~~~k~iF----rH---ND~~hLe~LL~~~d~~~PKiIAFE-SvYSMDGd~aPi~eiCD 202 (427)
T TIGR01821 135 IFS-DELNHASMIEGIRR---SGAEKFIF----RH---NDVAHLEKLLQSVDPNAPKIIAFE-SVYSMDGDIAPIKEICD 202 (427)
T ss_pred EEE-CCCCHHHHHHHHHH---CCCCEEEE----EC---CCHHHHHHHHHHCCCCCCCEEEEE-EHCCCCCCCCCHHHHHH
T ss_conf 983-65563569999874---78950563----05---997899999864779989568861-00016787266788966
Q ss_pred HHHHCCCEEEECCCCHHHHH-------HHHC-C----CCC--------------CCC-CCEEEECCCCCCCCCCCEEEEE
Q ss_conf 86417978991862012443-------2000-1----232--------------200-2356740456522567448983
Q gi|254780349|r 196 IADSIGAYLMADISHISGLV-------VGGQ-H----PSP--------------VPH-CHIVTTTTHKSLRGPRGGLIMT 248 (433)
Q Consensus 196 Ia~~~ga~l~~D~aH~~GLI-------a~g~-~----~~P--------------l~~-ADvvt~sTHKtl~GPrgGiI~~ 248 (433)
+||++||+-.+|.=|..||- |-.. | .|= +=+ -||+.||--|.| |-=||=|-.
T Consensus 203 lA~kYGALTy~DEVHAVGlYGprGgGIaErddfeshrasGiatPktndkGGakt~mhriDii~GTLaKAF-G~~GGYIa~ 281 (427)
T TIGR01821 203 LADKYGALTYLDEVHAVGLYGPRGGGIAERDDFESHRASGIATPKTNDKGGAKTLMHRIDIIEGTLAKAF-GVVGGYIAA 281 (427)
T ss_pred HHHHHCCCCEECCEEEECCCCCCCCCCCHHHHCCHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHC-CCCCCEEEC
T ss_conf 8887188630011465336588888512022110000157677765766652001110000016511223-444530205
Q ss_pred CCCCHHHHCCHHHCHHH-HHHHHHHHHHHHHHHH-HHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
Q ss_conf 36205650166465432-2344556668999999-997356489999999988899999986168523345888981263
Q gi|254780349|r 249 NHADLAKKINSAIFPGL-QGGPFMHSIAAKAVAF-GEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLV 326 (433)
Q Consensus 249 ~~~e~~~~i~~avfPg~-qg~~~~~~iaa~aval-~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlv 326 (433)
+. .+-+-|.+ --||. -..-++-.|+|=|.+- +-..+.++..-=.+=-+|++.|-..|+++|++|+. ++||+|=|
T Consensus 282 ~~-~L~D~~RS-~ApGFIFTTsLPP~~~aGA~asIRhLK~~eg~~lR~~hQ~~~~~lK~~L~~~GlPv~~--~pSHIvPv 357 (427)
T TIGR01821 282 SR-KLIDAVRS-YAPGFIFTTSLPPAIAAGALASIRHLKESEGQDLRRAHQERVKRLKKLLEALGLPVID--NPSHIVPV 357 (427)
T ss_pred CC-CCEEEEEE-CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCCEEEEE
T ss_conf 52-21320000-3784212421558999999999999751376778999989999999999957777548--87738876
Q ss_pred CCCCCCCCHHHH-HHHHHHCCEEE---ECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 166556767999-99888567188---03789989999888985122466673079998999999999999960
Q gi|254780349|r 327 DLRSKRMTGKRA-ESILGRVSITC---NKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 327 dl~~~~~~G~~a-~~~Le~~gI~~---Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
-+.+-... +++ .-+|++.||.| |.-|||--++- |||-=... -..+.|+.+.+=+..+-+
T Consensus 358 ~iGdA~~~-k~~SD~LL~~hGIYVQpINyPTVpRG~ER------LRitPtP~----H~~~~id~Lv~AL~~~w~ 420 (427)
T TIGR01821 358 IIGDAAKC-KKVSDLLLNKHGIYVQPINYPTVPRGTER------LRITPTPV----HTDKLIDDLVEALLLVWD 420 (427)
T ss_pred EECCHHHH-HHHHHHHHHHCCCEEECCCCCCCCCCCCC------CCCCCCCC----CCHHHHHHHHHHHHHHHH
T ss_conf 76686889-89989888717815712688889887502------44268889----887789999999999988
No 173
>TIGR01141 hisC histidinol-phosphate aminotransferase; InterPro: IPR005861 The biosynthesis of histidine is a central metabolic process in organisms ranging from bacteria to yeast and plants. The seventh step in the synthesis of histidine within eubacteria is carried out by a pyridoxal-5'-phosphate (PLP)-dependent l-histidinol phosphate aminotransferase (HisC, 2.6.1.9 from EC). HisC is a dimeric enzyme with a mass of approximately 80 kDa. Like most PLP-dependent enzymes, each HisC monomer consists of two domains, a larger PLP-binding domain having an alpha/beta/alpha topology, and a smaller domain. An N-terminal arm contributes to the dimerization of the two monomers . ; GO: 0004400 histidinol-phosphate transaminase activity, 0000105 histidine biosynthetic process.
Probab=99.42 E-value=9.9e-11 Score=95.21 Aligned_cols=306 Identities=19% Similarity=0.251 Sum_probs=220.0
Q ss_pred HHCCCCCCCCCC--CCHHHHHHHHCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC--CCCEECCCH-H
Q ss_conf 838881043010--298999983051----0288657988875336006799999999999998718--863010000-1
Q gi|254780349|r 33 NDEIQLIASENI--VSRAVLEAQGSI----LTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFN--VNFVNVQSH-S 103 (433)
Q Consensus 33 ~~~l~LiASEN~--~S~~v~~~l~S~----l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~--a~~anvqp~-S 103 (433)
...+.|-+-||. .||.+++++.-- =-|||-+ ++..+-. +...+.|| ..--||=.- -
T Consensus 28 ~~~ikL~sNEnP~gp~~~~~~~~~~~l~~a~l~RYPd----------p~~~~L~-----~~lA~~~~~~v~~eqi~~GGn 92 (377)
T TIGR01141 28 AEVIKLNSNENPYGPPEKAKEALRAELKEAKLHRYPD----------PDPAELK-----QALAKYLGKKVDPEQILLGGN 92 (377)
T ss_pred CCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC----------CCHHHHH-----HHHHHHHCCCCCCCCEEEECC
T ss_conf 3221413678899888899999999985087867989----------8668999-----999998288987140378415
Q ss_pred HHH-HHHHHHHHHHCCC-CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf 679-9999999831548-7488123344841114766543333322013665832-356598999999986046678970
Q gi|254780349|r 104 GSQ-MNQGVFLALMHPG-DSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKE-DGLLDMHEIESLAIEYNPKLIIVG 180 (433)
Q Consensus 104 G~~-An~av~~ALl~pG-D~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~-~~~ID~d~~~~~a~~~kPklIi~G 180 (433)
||. .-..++.|+++|| |.|+.+.+..+=| .++....+-+....+++.+ .+.-|.+.+...+...+||||++.
T Consensus 93 GsDe~I~~l~raf~~PGk~~~l~~~Pty~mY-----~~~A~~~g~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~kLvF~c 167 (377)
T TIGR01141 93 GSDEIIDLLIRAFLEPGKDAVLVPPPTYSMY-----EISAKIHGAEVKKVPLDEDADGQLDLEDILVAAIDEKPKLVFLC 167 (377)
T ss_pred CHHHHHHHHHHHHCCCCCCEEEECCCCHHHH-----HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEE
T ss_conf 6068999999985276654577617750036-----76553207147997405676675553789999862694089987
Q ss_pred CCCCC--CCCCHHHHHHHHHHC---CCEEEECCC--CHHHHHHHHCCCCCCCC----CCE-EEECCCCCC--CCCCCEEE
Q ss_conf 55243--536379999886417---978991862--01244320001232200----235-674045652--25674489
Q gi|254780349|r 181 GTAYS--RVWDWERFRSIADSI---GAYLMADIS--HISGLVVGGQHPSPVPH----CHI-VTTTTHKSL--RGPRGGLI 246 (433)
Q Consensus 181 ~S~y~--~~~d~~~l~eIa~~~---ga~l~~D~a--H~~GLIa~g~~~~Pl~~----ADv-vt~sTHKtl--~GPrgGiI 246 (433)
....| -.++-+.+.++++.+ .+++++|.| ++++ ..-.+|++++ -++ |+-|--|.| .|=|-|+-
T Consensus 168 ~PNNPTG~~~~~~~i~~~l~~~~~g~~lVV~DEAY~EF~~---~~~~~~~~~ll~~ypNL~vlRTlSKafgLAG~R~Gy~ 244 (377)
T TIGR01141 168 SPNNPTGNLLSREDIEAVLERTPEGDALVVVDEAYGEFSG---EEDEPSVLPLLAEYPNLIVLRTLSKAFGLAGLRVGYA 244 (377)
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCC---CCCCCCCCCHHHHCCCEEEEHHHHHHHHHHHHHHHHH
T ss_conf 8868867526989999999717699738998642345788---8677653231420798799810678877888889886
Q ss_pred EECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHC-CCC-CCCCCCCCC
Q ss_conf 83362056501664654322344556668999999997356--48999999998889999998616-852-334588898
Q gi|254780349|r 247 MTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSS--EFRDYAKQIVLNSQALAKKLQFL-GFD-IVSGGTDNH 322 (433)
Q Consensus 247 ~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~--~f~~Ya~qvv~NA~~La~~L~~~-G~~-vv~ggTd~H 322 (433)
+.+. ++.+.+++..-|.-.+.+ ... .|++..+ -.. .++.-.+++.++=..|-+.|.+. |++ |.. ++..
T Consensus 245 ~a~~-~~i~~l~kvr~Pfn~~~l--a~~--~A~aAL~-~~~~~~~~~~~~~~~~~Re~l~~~L~~~~~~~~v~~--S~aN 316 (377)
T TIGR01141 245 IANA-EIIDALNKVRAPFNLSRL--AQA--AAIAALR-DDDLQFIEKTVEEINAERERLYDELKKLEGLEDVYP--SDAN 316 (377)
T ss_pred CCCH-HHHHHHHHCCCCCCCCHH--HHH--HHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEC--CCCC
T ss_conf 0699-999999851688788979--999--9998527-146799999999999899999999871430001425--7763
Q ss_pred EEEECCCCCCCCHHHHHHHHHHCCEEEEC-CCCCCCCCCCCCCCCCCC--CCHHH
Q ss_conf 12631665567679999988856718803-789989999888985122--46667
Q gi|254780349|r 323 LMLVDLRSKRMTGKRAESILGRVSITCNK-NSIPFDPESPFITSGIRL--GTPSG 374 (433)
Q Consensus 323 ~vlvdl~~~~~~G~~a~~~Le~~gI~~Nk-n~iP~D~~~~~~~sGiRl--GT~ai 374 (433)
-||+++...++++..+.+.|-+.||+|=. +..|+ +.+.=||| ||++-
T Consensus 317 F~L~~~~~~~~~a~~~~~~L~~~GiivR~~~~~~G-----l~~~~lRITvGt~eE 366 (377)
T TIGR01141 317 FVLIRFPRGGLDAEALFEALLEKGIIVRDLNSFPG-----LLPNCLRITVGTREE 366 (377)
T ss_pred EEEEECCCCCCCHHHHHHHHHHCCEEEEECCCCCC-----CCCCCEEEEECCHHH
T ss_conf 79996277677779999999867806860655788-----777626897288799
No 174
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase; InterPro: IPR006234 These sequences represent O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis..
Probab=99.42 E-value=7.1e-12 Score=103.18 Aligned_cols=273 Identities=24% Similarity=0.321 Sum_probs=174.8
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 98887533600679999999999999871886301000016799999999831548748812334484111476654333
Q gi|254780349|r 64 GYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSG 143 (433)
Q Consensus 64 G~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g 143 (433)
||-=-||--=|--+-| ||..-|=||+-|--+. ||+.|-++.+++|++-||+|++---=. |+.+.+-.
T Consensus 45 GfvYsRy~NPTv~~FE------~Rla~LEGAe~A~AtA-sGMsAi~A~l~~L~~AGDhvv~sRSlF------Gst~~~~~ 111 (386)
T TIGR01325 45 GFVYSRYANPTVKVFE------ERLALLEGAERAVATA-SGMSAILAALMALLSAGDHVVASRSLF------GSTVVLVS 111 (386)
T ss_pred CCEEECCCCCCHHHHH------HHHHHHHCHHHHHHHH-HHHHHHHHHHHHHHCCCCEEEEEECHH------CCEEEEEE
T ss_conf 9666226986157889------9999740603788642-138999999999861687799851000------32002101
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHH--HHHHCCCEEEEECCCCCCC--CCHHHHHHHHHHCCCEEEECCCCHHHHHHHHC
Q ss_conf 3322013665832356598999999--9860466789705524353--63799998864179789918620124432000
Q gi|254780349|r 144 KWFKAIPYNVRKEDGLLDMHEIESL--AIEYNPKLIIVGGTAYSRV--WDWERFRSIADSIGAYLMADISHISGLVVGGQ 219 (433)
Q Consensus 144 ~~~~~~~y~~d~~~~~ID~d~~~~~--a~~~kPklIi~G~S~y~~~--~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~ 219 (433)
.++. .||+ ++-.+|.+.+.+= |-+-..|++++...+.|.. .|++.+.||||.+||+|++|.+- +..+
T Consensus 112 ~~l~--rFGv--~v~fv~~~Dl~~WeaA~~~nTkl~f~EtPSNPl~e~~Di~AlaELAHA~GA~lvvDN~f-----~tP~ 182 (386)
T TIGR01325 112 EILP--RFGV--EVSFVDATDLKAWEAALKPNTKLVFVETPSNPLAELVDIAALAELAHAVGALLVVDNVF-----ATPV 182 (386)
T ss_pred CCCC--CCCE--EEEECCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHH-----HHHH
T ss_conf 2534--3540--67517867878889856999507886368870467999999999887334100211456-----4100
Q ss_pred CCCCCCC-CCEEEECCCCCCCCC-C--CEEEEECCCCHHHH-CCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 1232200-235674045652256-7--44898336205650-16646543223445566689999999973564899999
Q gi|254780349|r 220 HPSPVPH-CHIVTTTTHKSLRGP-R--GGLIMTNHADLAKK-INSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAK 294 (433)
Q Consensus 220 ~~~Pl~~-ADvvt~sTHKtl~GP-r--gGiI~~~~~e~~~~-i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~ 294 (433)
+|.||++ ||||..|-.|-.=|- | ||.|++++ |+.+. +..-+- ..||-|.--= |..|.-=++ --.--++
T Consensus 183 ~qqPL~lGaDvvv~SATK~IDGqGRvlGGv~~G~~-e~~~~~v~~~lr---~~GpalSpFN--AW~lLkGlE-TL~lR~~ 255 (386)
T TIGR01325 183 LQQPLKLGADVVVYSATKHIDGQGRVLGGVILGSE-ELMEEFVAKFLR---HTGPALSPFN--AWVLLKGLE-TLSLRVQ 255 (386)
T ss_pred HCCCCCCCCEEEEECCCEEECCCCCEECCEEECCH-HHHHHHHHHHHH---CCCCCCCHHH--HHHHHHHHH-HHHHHHH
T ss_conf 13886456407986462011387540121453607-775348999974---2574323678--999850345-7899998
Q ss_pred HHHHHHHHHHHHHHHC-CCCCCC-------------------CCCCCCEEEECCCC-CCCCHHHHHHHHH---HCCEEEE
Q ss_conf 9998889999998616-852334-------------------58889812631665-5676799999888---5671880
Q gi|254780349|r 295 QIVLNSQALAKKLQFL-GFDIVS-------------------GGTDNHLMLVDLRS-KRMTGKRAESILG---RVSITCN 350 (433)
Q Consensus 295 qvv~NA~~La~~L~~~-G~~vv~-------------------ggTd~H~vlvdl~~-~~~~G~~a~~~Le---~~gI~~N 350 (433)
+--+||.+||+-|++. ++.-|. ||| .|-.|+.. ..+.=..|=+.|+ -..|+.|
T Consensus 256 ~~~~sAl~lA~~L~~~p~v~~V~Y~~lP~HPq~~lar~Q~~GGG~---Vv~f~l~~~edv~~~aAf~~~d~~~lv~it~N 332 (386)
T TIGR01325 256 KQADSALALAEWLEEQPKVQAVYYPGLPDHPQHELARRQQSGGGT---VVAFDLKGGEDVAREAAFKVLDALRLVDITNN 332 (386)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCE---EEEEECCCCHHHHHHHHHHHHCCEEEEEEECC
T ss_conf 614789999999970895579875878788526899984189967---99973268645799999998656146642045
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHCCC
Q ss_conf 37899899998889851224666730799
Q gi|254780349|r 351 KNSIPFDPESPFITSGIRLGTPSGTTRGF 379 (433)
Q Consensus 351 kn~iP~D~~~~~~~sGiRlGT~aiTtrG~ 379 (433)
= ||.||- |-=|+=||-|-
T Consensus 333 L----GD~ks~-------itHP~TTtHg~ 350 (386)
T TIGR01325 333 L----GDAKST-------ITHPATTTHGR 350 (386)
T ss_pred C----CCHHCC-------CCCCCCCCCCC
T ss_conf 2----010102-------01818888999
No 175
>KOG1549 consensus
Probab=99.42 E-value=7.6e-11 Score=96.04 Aligned_cols=330 Identities=18% Similarity=0.229 Sum_probs=188.8
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH-HHHHHHHHH-HC
Q ss_conf 4301029899998305102886579888753360067999999999999987188630100001679-999999983-15
Q gi|254780349|r 40 ASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQ-MNQGVFLAL-MH 117 (433)
Q Consensus 40 ASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~-An~av~~AL-l~ 117 (433)
.|...++|.|+.++---+.+-| |-|..| +-|-+--+.+| .+++...+|.||+.-++-..||.. +|-.|...+ -.
T Consensus 50 ~at~p~~~~Vldam~~~~~~~~--~nPh~~-~y~w~~~~~~E-~aR~~VAklInAd~~dIiFts~ATEs~Nlvl~~v~~~ 125 (428)
T KOG1549 50 QATGPMDPRVLDAMLPYLLEYL--GNPHSR-SYGWKAEDAVE-AAREQVAKLINADPSDIVFTSGATESNNLVLKGVARF 125 (428)
T ss_pred CCCCCCCHHHHHHHHHHHHHHH--CCCCCC-CCCHHHHHHHH-HHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCC
T ss_conf 7678999899999999999852--599855-42023358999-9999999984899773799479607888999872202
Q ss_pred CCC----EEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC--CCCCCCCCH
Q ss_conf 487----48812334484111476654-33333220136658323565989999999860466789705--524353637
Q gi|254780349|r 118 PGD----SFMGLSLDSGGHLTHGSSVN-MSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGG--TAYSRVWDW 190 (433)
Q Consensus 118 pGD----~Il~~~l~~GGHlshg~~~~-~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~--S~y~~~~d~ 190 (433)
++| +|+.++.+|.-+ ..... .--..+++...+++ +++.+|.+.+++.++ -++++|.+.. +.-.-..|+
T Consensus 126 ~~~~~~k~iitl~~eH~~v---~~s~~~l~~~g~~Vt~lpv~-~~~~~d~~~~~~~i~-~~T~lv~I~~Vnn~~gv~~Pv 200 (428)
T KOG1549 126 FGDKTKKHIITLQTEHPCV---LDSCRALQEEGLEVTYLPVE-DSGLVDISKLREAIR-SKTRLVSIMHVNNEIGVLQPV 200 (428)
T ss_pred CCCCCCCEEEEECCCCCCH---HHHHHHHHHCCEEEEEECCC-CCCCCCHHHHHHHCC-CCCEEEEEEECCCCCCCCCCH
T ss_conf 4566663699950457600---48999998668279991568-655211899997538-774399997003674210569
Q ss_pred HHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC----CCEEEECCCCCCCCCCC-EEEEECCCCHHHHCCHHHCHHH
Q ss_conf 999988641797899186201244320001232200----23567404565225674-4898336205650166465432
Q gi|254780349|r 191 ERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH----CHIVTTTTHKSLRGPRG-GLIMTNHADLAKKINSAIFPGL 265 (433)
Q Consensus 191 ~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~----ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~i~~avfPg~ 265 (433)
++|..||++.|-++++|+||-.|.| |++- +|+++.+.||- .||+| |.+.++. +.. ++ -+-|-+
T Consensus 201 ~EI~~icr~~~v~v~~DaAQavG~i-------~vDV~eln~D~~s~s~HK~-ygp~~iGaLYvr~-~~~-~~--~~~p~~ 268 (428)
T KOG1549 201 KEIVKICREEGVQVHVDAAQAVGKI-------PVDVQELNADFLSISAHKI-YGPPGIGALYVRR-KRP-RL--RVEPPL 268 (428)
T ss_pred HHHHHHHCCCCCEEEEEHHHHCCCC-------CCCHHHCCCHHEEEECCCC-CCCCCCEEEEECC-CCC-CC--CCCCCC
T ss_conf 9999985747807984545434974-------4118885821246432530-2799606999746-887-65--445764
Q ss_pred HHHHHH----------HHHHHHHHHHHHHHCHHHHHHHHHHHH-HHHHHHHHHHHCCCCCCCCCCCCCE----EEECCC-
Q ss_conf 234455----------666899999999735648999999998-8899999986168523345888981----263166-
Q gi|254780349|r 266 QGGPFM----------HSIAAKAVAFGEALSSEFRDYAKQIVL-NSQALAKKLQFLGFDIVSGGTDNHL----MLVDLR- 329 (433)
Q Consensus 266 qg~~~~----------~~iaa~aval~Ea~~~~f~~Ya~qvv~-NA~~La~~L~~~G~~vv~ggTd~H~----vlvdl~- 329 (433)
.||-.. -.+.++.-|. |.. ..|..|....++ ....|-..+...--.+.-.|...+. +-+-+.
T Consensus 269 ~GGgq~r~~rsGT~~~~~~~~~gsA~-e~~-~~~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~ 346 (428)
T KOG1549 269 SGGGQERGLRSGTVATPLAVGLGSAA-EFV-NKEMAYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPY 346 (428)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHH-HHH-HHHCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEECCC
T ss_conf 67743012205775741354368899-998-7502125899999999999887640735440478600046523660256
Q ss_pred CCCCCHHHHHHHHHHC-CEEEECCCCCCCC------C-CCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 5567679999988856-7188037899899------9-9888985122466673079998999999999999960
Q gi|254780349|r 330 SKRMTGKRAESILGRV-SITCNKNSIPFDP------E-SPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 330 ~~~~~G~~a~~~Le~~-gI~~Nkn~iP~D~------~-~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
..+..+....+....- |-.|-.+.++... . .....++||||-.--| +++|+..+++-|.+.+.
T Consensus 347 ~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~----t~~di~~~~~~i~~~v~ 417 (428)
T KOG1549 347 VEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYT----TEEDIDYLVDAIKKLVS 417 (428)
T ss_pred CCCCCHHHHHHHHHHCCCCHHHCCCCCCCHHHHHCCCCHHHHCCEEEEEEEEEC----CHHHHHHHHHHHHHHHH
T ss_conf 557200210104440233054438888621165437423221120698632207----68999999999999987
No 176
>PRK09265 aminotransferase AlaT; Validated
Probab=99.41 E-value=3.1e-10 Score=91.81 Aligned_cols=357 Identities=15% Similarity=0.090 Sum_probs=194.5
Q ss_pred HHHHHHCHHHH-HHHHH--HHH-HHHHCCCCCCCCC-----CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 46978589999-99999--999-9983888104301-----029899998305102886579888753360067999999
Q gi|254780349|r 12 QSLIESDPDVF-SLIGQ--ESC-RQNDEIQLIASEN-----IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIEN 82 (433)
Q Consensus 12 ~~l~~~Dpei~-~~i~~--e~~-rq~~~l~LiASEN-----~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~ 82 (433)
+.|+..-.+|- +++++ |.+ .-++-|+|-..|= -+++.+.++....+.+. .||+- ..-+.++-+
T Consensus 8 ~~~~~~~y~~~~~v~~kA~~l~~~G~~vi~l~iG~P~~~df~tP~~i~~a~~~a~~~~--~~Yt~------~~G~~eLRe 79 (404)
T PRK09265 8 SKLENVCYDIRGPVLKEAKRLEEEGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTA--QGYSD------SKGLFSARK 79 (404)
T ss_pred HCCCCCCEEEEHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCC--CCCCC------CCCCHHHHH
T ss_conf 2567750572379999999999769973587797999889999899999999874448--99898------888899999
Q ss_pred HHHHHHHHHCCCC--CEECCCHHHH-HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-C
Q ss_conf 9999999871886--3010000167-9999999983154874881233448411147665433333220136658323-5
Q gi|254780349|r 83 IAIERAKKLFNVN--FVNVQSHSGS-QMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-G 158 (433)
Q Consensus 83 la~~~a~~lF~a~--~anvqp~SG~-~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~ 158 (433)
-..+..++-++.+ .-||-..+|+ .|...++++|+.|||.|+..+... .++...+.+ .....++|++++++ .
T Consensus 80 aIA~~~~~~~~~~~~p~~I~vT~Ga~~al~~~~~all~pGDeVlvp~P~Y---p~Y~~~~~l--~g~~~v~~~~~~~~~f 154 (404)
T PRK09265 80 AIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDY---PLWTAAVSL--SGGKPVHYLCDEEAGW 154 (404)
T ss_pred HHHHHHHHHCCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEEECCCC---CHHHHHHHH--CCCEEEEEECCCCCCC
T ss_conf 99999997569998889978758889999999999649989899946887---306899997--6988999852632377
Q ss_pred CCCHHHHHHHHHHHCCCEEEEECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHH-CCCCCCCCC-C--E
Q ss_conf 659899999998604667897055243-----536379999886417978991862012443200-012322002-3--5
Q gi|254780349|r 159 LLDMHEIESLAIEYNPKLIIVGGTAYS-----RVWDWERFRSIADSIGAYLMADISHISGLVVGG-QHPSPVPHC-H--I 229 (433)
Q Consensus 159 ~ID~d~~~~~a~~~kPklIi~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g-~~~~Pl~~A-D--v 229 (433)
.+|.|++++.+. .|.|+|++-....| -.-.++++.++|.+.|.+++.|..+ ..|+-.| .|.+....+ | +
T Consensus 155 ~~d~~~l~~~i~-~~tk~iil~nP~NPTG~v~~~~~l~~l~~~a~~~~i~visDEiY-~~l~~d~~~~~s~~~l~~~~~~ 232 (404)
T PRK09265 155 FPDLDDIRSKIT-PRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIY-DKILYDGAEHISIASLAPDLLC 232 (404)
T ss_pred CCCHHHHHHHCC-CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCHH-HHHCCCCCCCCCHHHCCCCCEE
T ss_conf 889999997657-45559998689795120025046889999763155899850114-5523699988787881986059
Q ss_pred EE-ECCCCCC--CCCCCEEEEEC-CCCHHHHCCHHH--CHH-HHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHH
Q ss_conf 67-4045652--25674489833-620565016646--543-2234455666899999999735-648999999998889
Q gi|254780349|r 230 VT-TTTHKSL--RGPRGGLIMTN-HADLAKKINSAI--FPG-LQGGPFMHSIAAKAVAFGEALS-SEFRDYAKQIVLNSQ 301 (433)
Q Consensus 230 vt-~sTHKtl--~GPrgGiI~~~-~~e~~~~i~~av--fPg-~qg~~~~~~iaa~aval~Ea~~-~~f~~Ya~qvv~NA~ 301 (433)
++ .|.-|+| +|=|-|-++.. +....+.+-+++ +-. ..+.+.+.+.|+. .+|..-.+ .++..-..+..++-.
T Consensus 233 I~~~s~SK~~~m~G~RiG~~v~~~p~~~~~~~i~~~~~l~~~~~c~~~~~Q~a~~-~al~~~~~~~~~~~~~~rl~~~Rd 311 (404)
T PRK09265 233 VTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDMLASMRLCANVPAQHAIQ-TALGGYQSINELILPGGRLYEQRD 311 (404)
T ss_pred EEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH-HHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 9973677455677552799995291999999999999885401568828999999-997383129999999999999999
Q ss_pred HHHHHHHHC-CCCCCC-CCCCCCEEEECC--CCCCC-CHH-HHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 999998616-852334-588898126316--65567-679-999988856718803789989999888985122466673
Q gi|254780349|r 302 ALAKKLQFL-GFDIVS-GGTDNHLMLVDL--RSKRM-TGK-RAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGT 375 (433)
Q Consensus 302 ~La~~L~~~-G~~vv~-ggTd~H~vlvdl--~~~~~-~G~-~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiT 375 (433)
.+.+.|.+. |++++. .|+ -.+|+++ ...++ +.. -+.+.|++.|+.+. ||..=....+.-+||.-.
T Consensus 312 ~~~~~L~~i~g~~~~~P~Ga--fy~f~~l~~~~~~~~d~~~f~~~Ll~e~gV~v~----PG~~Fg~~~~~~vRlsf~--- 382 (404)
T PRK09265 312 RAWELLNAIPGVSCVKPKGA--LYAFPKLDPKVYPIHDDEKFVLDLLLQEKVLLV----QGTGFNWPEPDHFRIVTL--- 382 (404)
T ss_pred HHHHHHHHCCCCEECCCCEE--EEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEE----CCCCCCCCCCCEEEEEEC---
T ss_conf 99999973899575689838--998308773317999999999999986999997----785028899998999979---
Q ss_pred HCCCCHHHHHHHHHHHHHHHH
Q ss_conf 079998999999999999960
Q gi|254780349|r 376 TRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 376 trG~~e~em~~iA~li~~~L~ 396 (433)
-.++++++-.+-|.+.|+
T Consensus 383 ---~~~e~l~eal~Rl~~~l~ 400 (404)
T PRK09265 383 ---PRVDDLEDAIGRIGRFLS 400 (404)
T ss_pred ---CCHHHHHHHHHHHHHHHH
T ss_conf ---999999999999999999
No 177
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.41 E-value=2.2e-10 Score=92.75 Aligned_cols=331 Identities=17% Similarity=0.200 Sum_probs=184.7
Q ss_pred HHCCCCCCCCC--CCCHHHHHHHHCCCC---CC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC--EECCCHHH
Q ss_conf 83888104301--029899998305102---88-657988875336006799999999999998718863--01000016
Q gi|254780349|r 33 NDEIQLIASEN--IVSRAVLEAQGSILT---NK-YAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNF--VNVQSHSG 104 (433)
Q Consensus 33 ~~~l~LiASEN--~~S~~v~~~l~S~l~---nk-yaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~--anvqp~SG 104 (433)
++.|+|--.|- -+++.+.+++...+. +. ..-||+-.+ | ..+-.|.+| ++.++.+. -||-..+|
T Consensus 33 ~dvI~L~iGePdf~~P~~i~~a~~~ai~~~~~~~~~~gY~~~~---G--~~~LReaia----~~~~~~~~~~d~I~vt~G 103 (402)
T TIGR03542 33 ASVIRLGIGDTTQPLPASVIEAFHEAVDELASEETYRGYGPEQ---G--LPALREAIA----ENDYRGRISPEEIFISDG 103 (402)
T ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC---C--HHHHHHHHH----HHHHCCCCCHHHEEECCC
T ss_conf 9855898999899989999999999997122467867779740---6--499999999----997568998899677778
Q ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCCCC----CCCC-C-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEE
Q ss_conf 7999999998315487488123344841114----7665-4-33333220136658323565989999999860466789
Q gi|254780349|r 105 SQMNQGVFLALMHPGDSFMGLSLDSGGHLTH----GSSV-N-MSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLII 178 (433)
Q Consensus 105 ~~An~av~~ALl~pGD~Il~~~l~~GGHlsh----g~~~-~-~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi 178 (433)
+..-+..+++++.|||.|+..+...-.+... |... . .....-+....+..++++.+ .++....|.|+|+
T Consensus 104 a~~~l~~l~a~l~pGD~Vii~~P~y~~Y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~e~~~~-----~~~~~~~ktk~ii 178 (402)
T TIGR03542 104 AKCDIGRLQSIFGSDNTVAVQDPVYPAYVDTAVMTGRAGFADDTGQYRGIVYLPCTKENGFI-----PELPEERKIDIIY 178 (402)
T ss_pred CHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHCCC-----CCCCCCCCCEEEE
T ss_conf 29999999998399998998388881579999985995301356655672567676243857-----2223455735999
Q ss_pred EECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCC-C--C-CC--EEEECCCCCC--CCCCCEE
Q ss_conf 7055243-----536379999886417978991862012443200012322-0--0-23--5674045652--2567448
Q gi|254780349|r 179 VGGTAYS-----RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPV-P--H-CH--IVTTTTHKSL--RGPRGGL 245 (433)
Q Consensus 179 ~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl-~--~-AD--vvt~sTHKtl--~GPrgGi 245 (433)
+-....| -.-+++++.++|.+++.+++.|..|- -|+-.+..|.++ . . .+ |+.+|.-|+| +|=|-|.
T Consensus 179 ln~P~NPTG~v~s~eel~~i~~la~~~~i~iIsDEiY~-~~~~~~~~~~s~~~~~~~~~~~I~i~S~SK~~~m~G~RiG~ 257 (402)
T TIGR03542 179 LCSPNNPTGTVLTKEQLKELVDYANAHGSLILFDAAYS-AFISDPSIPHSIYEIEGAKECAIEINSFSKSLGFTGVRLGW 257 (402)
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHH-HHHCCCCCCCCCEECCCCCCEEEECCCCCCCCCCCCCCHHH
T ss_conf 89997988756899999999999875070796022288-76168987620111366521367316762402783405402
Q ss_pred EEECCCCHH--------HHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 983362056--------501664654322344556668999999997356489999999988899999986168523345
Q gi|254780349|r 246 IMTNHADLA--------KKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSG 317 (433)
Q Consensus 246 I~~~~~e~~--------~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~g 317 (433)
+...+ ++. +...+-......+.+.+.+.|+.+.-..+ ......+..+...+|.+.|.+.|.+.|+.+..
T Consensus 258 ~i~p~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~aal~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~- 334 (402)
T TIGR03542 258 TVVPK-ELTYADGHSVIQDWERRLCTTFNGASYPVQRAAEAAYAGE-GLQPILEAISYYMENARILREALEAAGFKVYG- 334 (402)
T ss_pred EECCH-HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC-
T ss_conf 11258-7754227999999999987625775599999999997378-85999999999999999999988756957607-
Q ss_pred CCCCCEEEECCCCCCCCHHHH-HHHHHHCCEEEECCCCCCCCCCCCCC---CCCCCCCHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 888981263166556767999-99888567188037899899998889---85122466673079998999999999999
Q gi|254780349|r 318 GTDNHLMLVDLRSKRMTGKRA-ESILGRVSITCNKNSIPFDPESPFIT---SGIRLGTPSGTTRGFKEKDFEYIGELIAQ 393 (433)
Q Consensus 318 gTd~H~vlvdl~~~~~~G~~a-~~~Le~~gI~~Nkn~iP~D~~~~~~~---sGiRlGT~aiTtrG~~e~em~~iA~li~~ 393 (433)
+.-...+|+|+.. +++..++ ...|+++||.+. ||. .|-+ .-+||.-. -.++++++-.+-|.+
T Consensus 335 ~~ga~yl~~~~~~-~~~~~~~~~~ll~e~~V~vv----PG~---~FG~~g~g~vRls~a------~~~e~l~ea~~Rl~~ 400 (402)
T TIGR03542 335 GENAPYLWVKTPE-GISSWDFFDFLLYQYHIVGT----PGS---GFGSSGEGFVRFSAF------GKRENIVAACERIKH 400 (402)
T ss_pred CCCCEEEEEECCC-CCCHHHHHHHHHHHCCEEEE----CCH---HHCCCCCCEEEEEEE------CCHHHHHHHHHHHHH
T ss_conf 9973489787899-98989999999985999997----644---768999896999972------999999999999997
Q ss_pred HH
Q ss_conf 96
Q gi|254780349|r 394 IL 395 (433)
Q Consensus 394 ~L 395 (433)
+|
T Consensus 401 ~L 402 (402)
T TIGR03542 401 AL 402 (402)
T ss_pred HC
T ss_conf 59
No 178
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.38 E-value=9.1e-11 Score=95.48 Aligned_cols=261 Identities=19% Similarity=0.203 Sum_probs=182.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHH----HCCC----CEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 7999999999999987188630100001679999999983----1548----7488123344841114766543333322
Q gi|254780349|r 76 YVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLAL----MHPG----DSFMGLSLDSGGHLTHGSSVNMSGKWFK 147 (433)
Q Consensus 76 ~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~AL----l~pG----D~Il~~~l~~GGHlshg~~~~~~g~~~~ 147 (433)
|..-+++| .+..+++-|-+.+-.||-||++.-.+-+++. -..| +.++.++-+||- .+.+....+|+
T Consensus 540 y~~~~~~l-~~~L~~itG~~~vSlQPnaGaqGE~aGll~Ir~Yh~~~g~~~R~i~LiP~SAHGT-----NpASA~maG~k 613 (955)
T PRK05367 540 YRELIADL-EAWLAEITGYDAVSLQPNAGSQGEYAGLLAIRAYHESRGEGHRNICLIPSSAHGT-----NPASAQMAGMK 613 (955)
T ss_pred HHHHHHHH-HHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC-----CHHHHHHCCCE
T ss_conf 99999999-9999997688867417886508999999999999997598778679955667888-----86668764976
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCCE---EEEECCCC-CCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCC
Q ss_conf 01366583235659899999998604667---89705524-353637999988641797899186201244320001232
Q gi|254780349|r 148 AIPYNVRKEDGLLDMHEIESLAIEYNPKL---IIVGGTAY-SRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSP 223 (433)
Q Consensus 148 ~~~y~~d~~~~~ID~d~~~~~a~~~kPkl---Ii~G~S~y-~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~P 223 (433)
++..+.|+ +|.||+|.+++.+++++.++ .|--.|.+ .|.-+++++.+|.+++|..+.+|.|..-.+| |. -+|
T Consensus 614 Vv~v~~d~-~G~iD~~dL~~k~~~~~~~laa~MiTyPsT~GvFE~~I~ei~~~vH~~GGqvY~DGANmNA~v--G~-~~P 689 (955)
T PRK05367 614 VVVVACDE-NGNIDLDDLRAKAEQHADNLAALMITYPSTHGVFEETIREICEIVHDHGGQVYLDGANMNAQV--GL-TRP 689 (955)
T ss_pred EEEEEECC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEE--CC-CCH
T ss_conf 89973089-999699999999998657767887447764566067799999999854998975464400302--30-258
Q ss_pred CCC-CCEEEECCCCCCCCCCCE------EEEECCCCHHHHC----------CHHHCHHHHHH-HHHHHHHHHHHHHHHHH
Q ss_conf 200-235674045652256744------8983362056501----------66465432234-45566689999999973
Q gi|254780349|r 224 VPH-CHIVTTTTHKSLRGPRGG------LIMTNHADLAKKI----------NSAIFPGLQGG-PFMHSIAAKAVAFGEAL 285 (433)
Q Consensus 224 l~~-ADvvt~sTHKtl~GPrgG------iI~~~~~e~~~~i----------~~avfPg~qg~-~~~~~iaa~aval~Ea~ 285 (433)
=+. +||+--..||||.-|+|| =|..++ .+..-+ ..++.|- .+. +=...|.-++.+..-++
T Consensus 690 g~~G~Dv~HlNLHKTF~iPHGGGGPG~GPi~v~~-hL~pfLP~~~~~~~~~~~~~g~v-saap~Gsa~il~is~~Yi~mm 767 (955)
T PRK05367 690 GDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKA-HLAPFLPGHPVVGIGGETGIGAV-SAAPFGSASILPISWMYIRMM 767 (955)
T ss_pred HHCCCCHHEECCCCCCCCCCCCCCCCCCHHHHHH-HHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHH
T ss_conf 7647203100133221246788898853488986-50223899855678886777650-458777517889999999986
Q ss_pred CHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCC-C--CCCCCEEEECCCC----CCCCHHHHHHHHHHCCEEE
Q ss_conf 5648-999999998889999998616852334-5--8889812631665----5676799999888567188
Q gi|254780349|r 286 SSEF-RDYAKQIVLNSQALAKKLQFLGFDIVS-G--GTDNHLMLVDLRS----KRMTGKRAESILGRVSITC 349 (433)
Q Consensus 286 ~~~f-~~Ya~qvv~NA~~La~~L~~~G~~vv~-g--gTd~H~vlvdl~~----~~~~G~~a~~~Le~~gI~~ 349 (433)
-.++ +.-.+.-|-||+.+++.|... |+|+. | |.--|-+++|+|+ .|++..+++++|-..|.-.
T Consensus 768 G~~GL~~at~~AiLnANYi~~rL~~~-y~ily~g~~~~~aHE~ild~r~~k~~~gi~~~DiAKRL~DyGfHa 838 (955)
T PRK05367 768 GAEGLKQATQVAILNANYIAKRLKDH-YPVLYTGRNGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHA 838 (955)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCEEEEEEECCHHHHHHHCCCHHHHHHHHHCCCCCC
T ss_conf 67789999999999999999871124-866345899967778863226643530998799999986669888
No 179
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.37 E-value=1.3e-09 Score=87.54 Aligned_cols=308 Identities=19% Similarity=0.192 Sum_probs=190.6
Q ss_pred HHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHH-HHHH
Q ss_conf 838881043010298999983051028865798887533600679999999999999871886301000016799-9999
Q gi|254780349|r 33 NDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQM-NQGV 111 (433)
Q Consensus 33 ~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~A-n~av 111 (433)
...+-|-+.||..+|...... . --|||-++. ..+- .+...+.+|.+.-+|-...|+.- -..+
T Consensus 28 ~~~ikL~sNEnP~~p~~~~~~-~-~lnrYPD~~----------~~~L-----r~alA~~~gv~~e~I~vGnGSdElI~~l 90 (355)
T PRK01688 28 NGDVWLNANEYPTAVEFQLTQ-Q-TLNRYPECQ----------PKAV-----IENYAQYAGVKPEQVLVSRGADEGIELL 90 (355)
T ss_pred CCCEEEECCCCCCCCCHHHHH-H-HHCCCCCCC----------HHHH-----HHHHHHHHCCCHHHEEEECCHHHHHHHH
T ss_conf 996895789998998776767-8-862497998----------8999-----9999998685877899816899999999
Q ss_pred HHHHHCCC-CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCC
Q ss_conf 99831548-748812334484111476654333332201366583235659899999998604667897055243--536
Q gi|254780349|r 112 FLALMHPG-DSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVW 188 (433)
Q Consensus 112 ~~ALl~pG-D~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~ 188 (433)
+.++++|| |.|+..+...+-+ .......|..+..+ +.++ +..+|++++.+.+ .++|+|++.....| ..+
T Consensus 91 ~raf~~pg~d~vl~~~PtF~~Y---~~~a~~~g~~~~~v--pl~~-~f~~d~~~~~~~~--~~~klvficNPNNPTG~~~ 162 (355)
T PRK01688 91 IRAFCEPGKDAILYCPPTYGMY---SVSAETIGVECRTV--PTLE-NWQLDLPAISDNL--DGVKVVYVCSPNNPTGNLI 162 (355)
T ss_pred HHHHHCCCCCEEEECCCCHHHH---HHHHHHCCCEEEEE--CCCC-CCCCCHHHHHHHC--CCCCEEEECCCCCCCCCCC
T ss_conf 9998558997499778876899---99998679579995--2765-7686999999751--5888899868999877646
Q ss_pred CHHHHHHHHHHC--CCEEEECCCCHHHHHHHHCCCCCCC-CCC-EEEECCCC--CCCCCCCEEEEECCCCHHHHCCHHHC
Q ss_conf 379999886417--9789918620124432000123220-023-56740456--52256744898336205650166465
Q gi|254780349|r 189 DWERFRSIADSI--GAYLMADISHISGLVVGGQHPSPVP-HCH-IVTTTTHK--SLRGPRGGLIMTNHADLAKKINSAIF 262 (433)
Q Consensus 189 d~~~l~eIa~~~--ga~l~~D~aH~~GLIa~g~~~~Pl~-~AD-vvt~sTHK--tl~GPrgGiI~~~~~e~~~~i~~avf 262 (433)
+-+++.++++.. ++++++|.|-+ .+.-..-+.+-+. |-+ ||+-|.-| .|+|-|=|.++++. ++.+.+++..-
T Consensus 163 ~~~~l~~l~~~~~~~~lvVvDEAY~-eF~~~~s~~~l~~~~~NliVlRTfSK~~gLAGlRlGy~ia~~-~ii~~l~k~~~ 240 (355)
T PRK01688 163 NPQDLRTLLELTRGKAIVVADEAYI-EFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANE-EVINLLLKVIA 240 (355)
T ss_pred CHHHHHHHHHHCCCCCEEEEECHHH-HCCCCHHHHHHHHCCCEEEEEEEHHHHHCCCCCCEEEEECCH-HHHHHHHHHHC
T ss_conf 8999999997588886688554164-347640045676407728999516687526873127885099-99999998507
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCCCEEEECCCCCCCCHHHHHH
Q ss_conf 43223445566689999999973564899999999888999999861685--2334588898126316655676799999
Q gi|254780349|r 263 PGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGF--DIVSGGTDNHLMLVDLRSKRMTGKRAES 340 (433)
Q Consensus 263 Pg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~--~vv~ggTd~H~vlvdl~~~~~~G~~a~~ 340 (433)
|.-.+++ ...+|.. +|........++..+++.+.-+.|.+.|.+.|+ .|. .+++.-+|+++. ++.+..+
T Consensus 241 p~~vn~~-~~~~a~~--al~~~~~~~~~~~~~~i~~~R~~l~~~L~~l~~~~~v~--pS~aNFil~~~~----~~~~~~~ 311 (355)
T PRK01688 241 PYPLSTP-VADIAAQ--ALSPQGIAAMRERVAQINANRQWLIAALKEIPCVEQVF--DSETNYILARFT----ASSAVFK 311 (355)
T ss_pred CCCCCHH-HHHHHHH--HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEC--CCCCCEEEEECC----CHHHHHH
T ss_conf 8975399-9999999--97204599999999999999999999998589986168--998878999779----9999999
Q ss_pred HHHHCCEEEECC-CCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf 888567188037-8998999988898512246667307999899999999
Q gi|254780349|r 341 ILGRVSITCNKN-SIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGE 389 (433)
Q Consensus 341 ~Le~~gI~~Nkn-~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~ 389 (433)
.|.+.||.+-.. .-|+ .+..|||..- .++||+.+-+
T Consensus 312 ~L~~~GIlVR~~~~~~g------l~~~lRItig-------t~een~~ll~ 348 (355)
T PRK01688 312 SLWDQGIILRDQNKQPG------LSNCLRITIG-------TREECQRVID 348 (355)
T ss_pred HHHHCCEEEEECCCCCC------CCCEEEEECC-------CHHHHHHHHH
T ss_conf 99979909955898789------9998999769-------9999999999
No 180
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.37 E-value=2e-09 Score=86.20 Aligned_cols=300 Identities=18% Similarity=0.219 Sum_probs=177.9
Q ss_pred HHHHHHHHHHHHH-HHHCCCCCEECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 7999999999999-987188630100001679-99999998315487488123344841114766543333322013665
Q gi|254780349|r 76 YVDDIENIAIERA-KKLFNVNFVNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNV 153 (433)
Q Consensus 76 ~~d~iE~la~~~a-~~lF~a~~anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~ 153 (433)
+-.--+.++.... ..-+.++--+|=..||++ |...+...+++|||+|+.=+...=|.+ ..+.....+.++.++
T Consensus 134 ~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~-----~~~~~~g~~~~~vp~ 208 (459)
T COG1167 134 LPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGAL-----QALEALGARVIPVPV 208 (459)
T ss_pred CHHHHHHHHHHHHHHCCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHH-----HHHHHCCCCEEEECC
T ss_conf 899999999999997499888303898064999999999984799999998999828999-----999986994786067
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCC----CC---HHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC
Q ss_conf 8323565989999999860466789705524353----63---7999988641797899186201244320001232200
Q gi|254780349|r 154 RKEDGLLDMHEIESLAIEYNPKLIIVGGTAYSRV----WD---WERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH 226 (433)
Q Consensus 154 d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~----~d---~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ 226 (433)
|.+ | +|.|++++..+..+||++++= +.+-.| .+ =+++-++|.+.+.+++.|-..- =|--.+.-+.|+..
T Consensus 209 d~~-G-~~~e~le~~~~~~~~k~~y~~-P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~-el~~~~~p~~~l~~ 284 (459)
T COG1167 209 DED-G-IDPEALEEALAQWKPKAVYVT-PTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYG-ELRYDGPPPPPLKA 284 (459)
T ss_pred CCC-C-CCHHHHHHHHHCCCCCEEEEC-CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCH-HHCCCCCCCCCHHH
T ss_conf 888-9-897999999850697289978-8963889874599999999999997598799867743-32158899834576
Q ss_pred C----C-EEEECCCCCC-CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH---H
Q ss_conf 2----3-5674045652-2567448983362056501664654322344556668999999997356489999999---9
Q gi|254780349|r 227 C----H-IVTTTTHKSL-RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQI---V 297 (433)
Q Consensus 227 A----D-vvt~sTHKtl-~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qv---v 297 (433)
. . +..+|.-|+| ||=|-|.+.... ++.+++...--=..++ .+.+...+++..- .+-.|....+++ .
T Consensus 285 ld~~~rViy~gSFSK~l~PglRlG~vv~p~-~~~~~~~~~k~~~~~~---~s~~~Q~~la~~l-~~G~~~~hl~~lR~~y 359 (459)
T COG1167 285 LDAPGRVIYLGSFSKTLAPGLRLGYVVAPP-ELIEKLLRLKQAADLG---PSSLSQAALAAFL-LSGHYDRHLRRLRREY 359 (459)
T ss_pred HCCCCCEEEECCCHHHHCCCCCEEEEECCH-HHHHHHHHHHHHHCCC---CCHHHHHHHHHHH-HCCHHHHHHHHHHHHH
T ss_conf 289997899913266514675549997299-9999999998762569---9899999999999-7285999999999999
Q ss_pred -HHHHHHHHHHHHCCCCCC--CCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf -888999999861685233--45888981263166556767999998885671880378998999988898512246667
Q gi|254780349|r 298 -LNSQALAKKLQFLGFDIV--SGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSG 374 (433)
Q Consensus 298 -~NA~~La~~L~~~G~~vv--~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~ai 374 (433)
+--..|.+.|.+.+...+ .....-=.+|+++ +.+++..+....+.+.|+.+---+-.|...+. ..+++|||-...
T Consensus 360 ~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l-~~~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~-~~~~~Rl~~s~~ 437 (459)
T COG1167 360 ARRRDALLEALAEYLPELATWTRPEGGLFLWLEL-PEGIDARELLAAALEKGVVVTPLGSAFSADGD-PRNGLRLSFSSP 437 (459)
T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEC-CCCCCHHHHHHHHHHCCCEEECCCCCCCCCCC-CCCEEEEECCCC
T ss_conf 9999999999997478763772699558999986-99888899999999869979458866357898-898289988989
Q ss_pred HHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 3079998999999999999960
Q gi|254780349|r 375 TTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 375 TtrG~~e~em~~iA~li~~~L~ 396 (433)
+ ++++++-...+.+++.
T Consensus 438 ~-----~e~i~~gi~~l~~~~~ 454 (459)
T COG1167 438 S-----EEEIEEGIKRLAALLR 454 (459)
T ss_pred C-----HHHHHHHHHHHHHHHH
T ss_conf 9-----9999999999999999
No 181
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.37 E-value=1.5e-09 Score=86.97 Aligned_cols=323 Identities=17% Similarity=0.227 Sum_probs=214.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEE--CCCCCCCCCCCCC-----
Q ss_conf 888753360067999999999999987188630100001679999999983154874881--2334484111476-----
Q gi|254780349|r 65 YPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMG--LSLDSGGHLTHGS----- 137 (433)
Q Consensus 65 ~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~--~~l~~GGHlshg~----- 137 (433)
.-|.--|+|..-...+ .+-+++.||.+|.-. .|-|-.|-...+-.++++|+.+.+ |-..+-+|+....
T Consensus 69 m~GDEAYagsrs~~~L----~~avkdifGfq~~iP-thQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ 143 (471)
T COG3033 69 MRGDEAYAGSRSYYAL----ADAVKDIFGFQYTIP-THQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQI 143 (471)
T ss_pred HCCCHHHCCCCCHHHH----HHHHHHHCCCEEEEE-CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCHHHHHHH
T ss_conf 5253543155338999----999998617346512-55773177788999841032067741012345312022677875
Q ss_pred ----CCCCC--CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC---EEEE---ECCCCCCCC---CHHHHHHHHHHCCC
Q ss_conf ----65433--333220136658323565989999999860466---7897---055243536---37999988641797
Q gi|254780349|r 138 ----SVNMS--GKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPK---LIIV---GGTAYSRVW---DWERFRSIADSIGA 202 (433)
Q Consensus 138 ----~~~~~--g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPk---lIi~---G~S~y~~~~---d~~~l~eIa~~~ga 202 (433)
+.++- .-.-..+.|++ .|.+|.+++++++++.-+. +|++ --|+-..|. +.+++++||++++.
T Consensus 144 ng~~~~n~~~~ea~d~~~~~pF---KGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~i 220 (471)
T COG3033 144 NGATPRNVYVDEAFDTEVKYPF---KGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDI 220 (471)
T ss_pred CCCCCCCCCCCCCCCCCCCCCC---CCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 4870212316655664556887---7865799999999873714586899999626667871207769999999987199
Q ss_pred EEEECCCCHHH---HHHH-----------HCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCC---HHHHCCH-----H
Q ss_conf 89918620124---4320-----------00123220023567404565225674489833620---5650166-----4
Q gi|254780349|r 203 YLMADISHISG---LVVG-----------GQHPSPVPHCHIVTTTTHKSLRGPRGGLIMTNHAD---LAKKINS-----A 260 (433)
Q Consensus 203 ~l~~D~aH~~G---LIa~-----------g~~~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~e---~~~~i~~-----a 260 (433)
.++.|++-++- +|-- -.-.--+.|||-.|.|--|-=--+-||++..||+. +...... -
T Consensus 221 pvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmGGfl~~~D~~~fDvy~~~~~~~V~~e 300 (471)
T COG3033 221 PVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMGGFLCFKDDSFFDVYEECRTLVVVQE 300 (471)
T ss_pred CEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCEECCCCEEEECCCCHHHHHHHHHHHEEEEC
T ss_conf 58964456654202234247655546099999999865124302025452422465788647507789999876657512
Q ss_pred HCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC-------CC
Q ss_conf 65432234455666899999999735648999999998889999998616852334588898126316655-------67
Q gi|254780349|r 261 IFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSK-------RM 333 (433)
Q Consensus 261 vfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~-------~~ 333 (433)
=||.+ ||.-=--+.++|+.|.|..+.+|-+ .-|+--+.|++.|.+.|.+|+- -.--|-|.||.... .+
T Consensus 301 G~~tY-Ggl~GrdmealAvGL~e~~~~~yl~---~Rv~Qv~YL~~~l~~~GVpi~~-paGGHavfvda~~~lphip~eqF 375 (471)
T COG3033 301 GFPTY-GGLAGRDMEALAVGLREGVNFDYLA---HRVAQVQYLADGLEEAGVPIVQ-PAGGHAVFVDAGKFLPHIPAEQF 375 (471)
T ss_pred CCCCC-CCCCCHHHHHHHHHHHHHCCCHHHH---HHHHHHHHHHHHHHHCCCEEEE-CCCCCEEEEEHHHHCCCCCHHHC
T ss_conf 66665-7644232899997888742708999---9999999999888865973685-27871699634563677882448
Q ss_pred CHHH-HHHHHHHCCEEEE---CCCCCCCCCCCCCC----CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 6799-9998885671880---37899899998889----851224666730799989999999999999602577621
Q gi|254780349|r 334 TGKR-AESILGRVSITCN---KNSIPFDPESPFIT----SGIRLGTPSGTTRGFKEKDFEYIGELIAQILDGSSSDEE 403 (433)
Q Consensus 334 ~G~~-a~~~Le~~gI~~N---kn~iP~D~~~~~~~----sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~~~~~~~ 403 (433)
.+.. +.+.-.++||.+- .-+.+.|++.+-.- .=+|+- +-||-++.++|+-|++-+..+.+...+.+.
T Consensus 376 paqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRlt---ipRrtYt~~HmD~V~~a~~~l~e~~~~ikg 450 (471)
T COG3033 376 PAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLT---IPRRTYTQTHMDFVIEAFKALKENAEDIKG 450 (471)
T ss_pred CHHHHHHHHHHHHCEEEEEEECEECCCCCCCCCCCCCCHHEEEEE---CCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 477899999998382366420111155877643478712304674---351114566799999999999854246888
No 182
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative; InterPro: IPR010962 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). PLP is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination , , . PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors . Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy . PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalyzed reactions, enzymatic and non-enzymatic . This entry contains a number of enzyme families: Serine palmitoyltransferase Glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase) 5-aminolevulinic acid synthase 8-amino-7-oxononanoate synthase All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.; GO: 0016740 transferase activity, 0030170 pyridoxal phosphate binding.
Probab=99.37 E-value=1.2e-10 Score=94.71 Aligned_cols=313 Identities=22% Similarity=0.269 Sum_probs=205.9
Q ss_pred HHCCCCCCCCCCC----CHHHHHHHHCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHCCCCCEECCCHHHHHH
Q ss_conf 8388810430102----989999830510288657988875336006-79999999999999871886301000016799
Q gi|254780349|r 33 NDEIQLIASENIV----SRAVLEAQGSILTNKYAEGYPSKRYYGGCQ-YVDDIENIAIERAKKLFNVNFVNVQSHSGSQM 107 (433)
Q Consensus 33 ~~~l~LiASEN~~----S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~-~~d~iE~la~~~a~~lF~a~~anvqp~SG~~A 107 (433)
++.||| +|.||+ .|...++-..-+ .-|-=|----|=-+||= ..+++| +-+.-|.-.=|-.=.+||.+|
T Consensus 33 ~~vinL-sSNNYLGlA~hp~Lk~aA~~a~-~~yGvGAGAVRTIaGTl~lH~eLE-----~~LA~FK~teAAl~fqSGF~~ 105 (392)
T TIGR01825 33 KKVINL-SSNNYLGLASHPRLKEAAKEAI-QQYGVGAGAVRTIAGTLELHEELE-----EKLAKFKKTEAALVFQSGFNT 105 (392)
T ss_pred EEEEEC-CCCCCCCCCCCHHHHHHHHHHH-HHCCCCCCCHHHHHHHHHHHHHHH-----HHHHHHCCCCEEEHHHCCHHH
T ss_conf 578740-4355455468876899999999-865962241210433778999999-----998755382011010312237
Q ss_pred HHHHHHHHHCCCC--EEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---H---CCCEEE
Q ss_conf 9999998315487--48812334484111476654-3333322013665832356598999999986---0---466789
Q gi|254780349|r 108 NQGVFLALMHPGD--SFMGLSLDSGGHLTHGSSVN-MSGKWFKAIPYNVRKEDGLLDMHEIESLAIE---Y---NPKLII 178 (433)
Q Consensus 108 n~av~~ALl~pGD--~Il~~~l~~GGHlshg~~~~-~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~---~---kPklIi 178 (433)
|++|+.||++.|| -|++=.|- |++-+- ++.-.-..+-| ...|+|.|++.+++ . +-||||
T Consensus 106 N~GvlSa~L~k~ddG~v~SdELN------HASIIDG~RLtkA~k~~y------~H~dm~DL~~~l~e~~~~Gqy~~~l~v 173 (392)
T TIGR01825 106 NQGVLSALLRKGDDGIVLSDELN------HASIIDGLRLTKAKKKIY------KHVDMDDLERVLRENVEEGQYKKKLIV 173 (392)
T ss_pred HHHHHHHHHCCCCCEEEEECCCC------HHHHHHCCCCCCCCEEEE------ECCCHHHHHHHHHHCCCCCCCCCEEEE
T ss_conf 79999876235887158720002------034550422378856898------459845899999716033754436899
Q ss_pred EECCCCCCCC---CHHHHHHHHHHCCCEEEECCCCHHHHHH-H--HC-CCCCCCC--CCEEEECCCCCCCCCCCEEEEEC
Q ss_conf 7055243536---3799998864179789918620124432-0--00-1232200--23567404565225674489833
Q gi|254780349|r 179 VGGTAYSRVW---DWERFRSIADSIGAYLMADISHISGLVV-G--GQ-HPSPVPH--CHIVTTTTHKSLRGPRGGLIMTN 249 (433)
Q Consensus 179 ~G~S~y~~~~---d~~~l~eIa~~~ga~l~~D~aH~~GLIa-~--g~-~~~Pl~~--ADvvt~sTHKtl~GPrgGiI~~~ 249 (433)
-++ +|+..- ++.+|.|||.++||+++||=||-+|..- . |. .===|.| -||=.||--|-+ |-=||-+-..
T Consensus 174 TDG-VFSMDGdvApLp~iVE~Ae~Yda~~yVDDAHGsGVlGe~GrGtV~HFGL~y~~v~~qvGTLSKA~-GvvGGY~AG~ 251 (392)
T TIGR01825 174 TDG-VFSMDGDVAPLPEIVELAEKYDALVYVDDAHGSGVLGEKGRGTVKHFGLEYDKVDIQVGTLSKAI-GVVGGYVAGS 251 (392)
T ss_pred ECC-EEECCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEECCHHHHH-CCCCCCCCCC
T ss_conf 665-04256787887323346324595799863346644477887135303754164678855522322-2566423488
Q ss_pred CCCHHHHCCHHHCHHHHHHHH-HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC
Q ss_conf 620565016646543223445-5666899999999735648999999998889999998616852334588898126316
Q gi|254780349|r 250 HADLAKKINSAIFPGLQGGPF-MHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDL 328 (433)
Q Consensus 250 ~~e~~~~i~~avfPg~qg~~~-~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl 328 (433)
+ |+.+=+..--=|.+-|+.+ +..++|..-|+.+.+. + .+..++-=+|++-|-+.|.+.||++ +.|++-+.=|=+
T Consensus 252 ~-~lidyL~~~aRPFLFSta~~Pa~~~A~~~Av~~l~~-~-~~l~~kLW~Nt~ylk~~L~~LGydl--~~S~tPItPv~~ 326 (392)
T TIGR01825 252 K-ELIDYLKARARPFLFSTALPPAVVAALIEAVDVLQE-S-PELMEKLWDNTRYLKAGLSKLGYDL--GESETPITPVLI 326 (392)
T ss_pred H-HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC-C-CCHHHHHHHHHHHHHHHHHHHCCCC--CCCCCCCCCEEE
T ss_conf 8-999999862898601257880789999999998707-9-3147776788999998767616411--476686124587
Q ss_pred CCCCCCHHHHHHHHHHC-CEEEE---CCCCCCCCCCCCCCCCCCCCCHHHHHCC
Q ss_conf 65567679999988856-71880---3789989999888985122466673079
Q gi|254780349|r 329 RSKRMTGKRAESILGRV-SITCN---KNSIPFDPESPFITSGIRLGTPSGTTRG 378 (433)
Q Consensus 329 ~~~~~~G~~a~~~Le~~-gI~~N---kn~iP~D~~~~~~~sGiRlGT~aiTtrG 378 (433)
-+.+ ..++++++|-.- ||-+. .-+||-++- =||.=..|-=||-
T Consensus 327 Gde~-~A~efS~rL~~~yGvFa~sivFPTVp~g~A------RiR~~~tA~HTkd 373 (392)
T TIGR01825 327 GDEK-VAQEFSRRLLDEYGVFAQSIVFPTVPRGTA------RIRNIPTAEHTKD 373 (392)
T ss_pred CCCH-HHHHHHHHHHHHCCEEEEEEECCCCCCCCC------CCCCCCCHHCCHH
T ss_conf 6515-689999987775290899842165669884------2124656130266
No 183
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.37 E-value=2.2e-10 Score=92.85 Aligned_cols=261 Identities=18% Similarity=0.206 Sum_probs=180.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHH----CCC----CEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 79999999999999871886301000016799999999831----548----7488123344841114766543333322
Q gi|254780349|r 76 YVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALM----HPG----DSFMGLSLDSGGHLTHGSSVNMSGKWFK 147 (433)
Q Consensus 76 ~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl----~pG----D~Il~~~l~~GGHlshg~~~~~~g~~~~ 147 (433)
|..-+++| .+..+++-|-+.+-.||-||++--.+-+++.- ..| +.+|.++-+||- .+.+...-+|+
T Consensus 541 y~~l~~~L-~~~L~~iTG~~~vslQPnaGaqGE~aGl~~ir~yh~~~g~~~R~icLIP~SAHGT-----NPASA~maG~~ 614 (954)
T PRK12566 541 YKAMIDEL-EAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHESRGQSQRDICLIPASAHGT-----NPASAQMAGMR 614 (954)
T ss_pred HHHHHHHH-HHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC-----CHHHHHHCCCE
T ss_conf 99999999-9999986685604257787751068999999999997499888379967898888-----97789766966
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCCEE---EEECCC-CCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCC
Q ss_conf 013665832356598999999986046678---970552-4353637999988641797899186201244320001232
Q gi|254780349|r 148 AIPYNVRKEDGLLDMHEIESLAIEYNPKLI---IVGGTA-YSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSP 223 (433)
Q Consensus 148 ~~~y~~d~~~~~ID~d~~~~~a~~~kPklI---i~G~S~-y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~P 223 (433)
++..+.|+ +|.||+|.+++.+.+++.++- |--.|. -.|.-+++++.+|.+++|..+.+|+|..-.+| |. -+|
T Consensus 615 Vv~v~~~~-~G~iD~~dL~~k~~~~~~~laa~MiTyPsT~GvfE~~i~ei~~~vH~~GGqvY~DGANmNA~v--G~-~~P 690 (954)
T PRK12566 615 VVIVECDN-DGNVDLDDLKAKAAEAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQV--GL-ARP 690 (954)
T ss_pred EEEEECCC-CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCHHHHH--CC-CCC
T ss_conf 89960189-998489999999997266544343006764512255599999999970988985463223241--44-572
Q ss_pred CCC-CCEEEECCCCCCCCCCCE------EEEECCCCHHHHCCH-HH------CH--HHH-HH-HHHHHHHHHHHHHHHHH
Q ss_conf 200-235674045652256744------898336205650166-46------54--322-34-45566689999999973
Q gi|254780349|r 224 VPH-CHIVTTTTHKSLRGPRGG------LIMTNHADLAKKINS-AI------FP--GLQ-GG-PFMHSIAAKAVAFGEAL 285 (433)
Q Consensus 224 l~~-ADvvt~sTHKtl~GPrgG------iI~~~~~e~~~~i~~-av------fP--g~q-g~-~~~~~iaa~aval~Ea~ 285 (433)
=+. +||+-...||||.-|+|| =|..++ .+..-+-. .+ .| +.. +. +=...|.-++.++.-++
T Consensus 691 g~~G~Dv~HlNLHKTF~iPHGGGGPG~GPi~v~~-hL~pfLP~~~~~~~~g~~~~~~~vs~a~~Gsa~il~is~~Yi~mm 769 (954)
T PRK12566 691 ADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRA-HLAPFVANHPVVPVPGPDPNNGAVSAAPWGSASILPISWMYIAMM 769 (954)
T ss_pred CCCCCCCEEEECHHCCCCCCCCCCCCCCCEEEHH-HCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHH
T ss_conf 0036760232002203688788889877666642-316758998634689988776625524778479999999999986
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC---CCCCCCEEEECCCC----CCCCHHHHHHHHHHCCEE
Q ss_conf 5648999999998889999998616852334---58889812631665----567679999988856718
Q gi|254780349|r 286 SSEFRDYAKQIVLNSQALAKKLQFLGFDIVS---GGTDNHLMLVDLRS----KRMTGKRAESILGRVSIT 348 (433)
Q Consensus 286 ~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~---ggTd~H~vlvdl~~----~~~~G~~a~~~Le~~gI~ 348 (433)
-.+.+.-.+.-|-||+.|++.|... |+|+. .|.--|-+++|+|+ .|++..+++++|-..|.-
T Consensus 770 G~~L~~at~~AiLnANY~~~rL~~~-y~ily~g~~g~~aHE~ild~r~~k~~~gi~~~DiAKrL~DyGfH 838 (954)
T PRK12566 770 GPQLADASEVAILSANYLANQLGGA-FPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFH 838 (954)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCCEEEEEEECCHHHHHHCCCCHHHHHHHHHCCCCC
T ss_conf 7779999999999999999973044-86551699998777898503553454299818998998657998
No 184
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.36 E-value=5.9e-10 Score=89.83 Aligned_cols=314 Identities=15% Similarity=0.169 Sum_probs=194.0
Q ss_pred HHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHH-HHH
Q ss_conf 8388810430102989999830510288657988875336006799999999999998718863010000167999-999
Q gi|254780349|r 33 NDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMN-QGV 111 (433)
Q Consensus 33 ~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An-~av 111 (433)
...|-|-+.||...+... ...-.|||-+ .+..+- ++...+.+|...-+|=...|+.-- ..+
T Consensus 29 ~~~ikL~~NEnp~~~p~~---~~~~~~RYPD----------~~~~~L-----r~~lA~~~gv~~~~I~~GnGSdE~I~ll 90 (362)
T PRK04781 29 QGDVWLNANESAWGNPAD---PDASTRRYPD----------PQPKGL-----RSALAALYGCAPEQLLIGRGSDEAIDLL 90 (362)
T ss_pred CCCEEEECCCCCCCCCHH---HHHHHCCCCC----------CCHHHH-----HHHHHHHHCCCHHHEEEECCHHHHHHHH
T ss_conf 999897798999998444---4277547989----------988999-----9999998686955799836789999999
Q ss_pred HHHHHCCC-CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCC
Q ss_conf 99831548-748812334484111476654333332201366583235659899999998604667897055243--536
Q gi|254780349|r 112 FLALMHPG-DSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVW 188 (433)
Q Consensus 112 ~~ALl~pG-D~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~ 188 (433)
+.+++.|| |.|+..+...+-+- ......|..+..+++.-+.++...|.+++.+.+...+||+|++.....| ..+
T Consensus 91 ~~a~~~pg~d~vl~~~PtF~~Y~---~~a~~~g~~~~~vpl~~~~~~f~~d~~~~~~~~~~~~~klv~l~nPNNPTG~~~ 167 (362)
T PRK04781 91 VRGLCVPERDAVLVTPPVFGMYA---VCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAI 167 (362)
T ss_pred HHHHHCCCCCEEEECCCCHHHHH---HHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCC
T ss_conf 99995589854884797468999---999983987999957555124677999999885267988899868989735567
Q ss_pred CHHHHHHHHHHC--CCEEEECCCCHHHHHHHHCCCCCCC----CCC-EEEECCCCC--CCCCCCEEEEECCCCHHHHCCH
Q ss_conf 379999886417--9789918620124432000123220----023-567404565--2256744898336205650166
Q gi|254780349|r 189 DWERFRSIADSI--GAYLMADISHISGLVVGGQHPSPVP----HCH-IVTTTTHKS--LRGPRGGLIMTNHADLAKKINS 259 (433)
Q Consensus 189 d~~~l~eIa~~~--ga~l~~D~aH~~GLIa~g~~~~Pl~----~AD-vvt~sTHKt--l~GPrgGiI~~~~~e~~~~i~~ 259 (433)
+.+++.++++.. ++++++|.|= .-+- ..++-++ |-+ ||+-|.-|. |+|-|=|..+.+ +++.+.+++
T Consensus 168 ~~~~l~~~~~~~~~~~lvvvDEAY-~eF~---~~~s~~~l~~~~~NliVlRTfSK~ygLAGlRlGy~ia~-~~~i~~l~k 242 (362)
T PRK04781 168 ALDQIETALQALQGKALVVVDEAY-GEFS---DVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIAN-AELIAVLRR 242 (362)
T ss_pred CHHHHHHHHHHCCCCCEEEEECHH-HHHC---CCCCHHHHHHCCCCEEEEECHHHHHHCCCCCEEEEECC-HHHHHHHHH
T ss_conf 989999999757998089983416-5525---78434457651785453314058740755350444179-999999998
Q ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHCHHH---HHHHHHHHHHHHHHHHHHHHC-CC-CCCCCCCCCCEEEECCCCCCCC
Q ss_conf 465432234455666899999999735648---999999998889999998616-85-2334588898126316655676
Q gi|254780349|r 260 AIFPGLQGGPFMHSIAAKAVAFGEALSSEF---RDYAKQIVLNSQALAKKLQFL-GF-DIVSGGTDNHLMLVDLRSKRMT 334 (433)
Q Consensus 260 avfPg~qg~~~~~~iaa~aval~Ea~~~~f---~~Ya~qvv~NA~~La~~L~~~-G~-~vv~ggTd~H~vlvdl~~~~~~ 334 (433)
..-|.-.+.+ ...+|.+ ++. .+.+ +....+++..-..|.+.|.+. |+ .|. .+++.-+|+++. +
T Consensus 243 ~~~p~~v~~~--a~~~a~~-al~---~~~~~~~~~~v~~i~~eR~~l~~~L~~l~g~~~v~--pS~aNFil~~~~----~ 310 (362)
T PRK04781 243 CQAPYPVPTP--CAAMAEQ-ALS---APALAVTARRVAEVRAERERLHAALAQLPGVRQVY--PSQGNFLLVRFD----D 310 (362)
T ss_pred HCCCCCCCHH--HHHHHHH-HHC---CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEC--CCCCEEEEEECC----C
T ss_conf 2179887599--9999999-960---76699999999999999999999998478985568--998849998779----9
Q ss_pred HHHHHHHHHHCCEEEEC-CCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 79999988856718803-7899899998889851224666730799989999999999999602
Q gi|254780349|r 335 GKRAESILGRVSITCNK-NSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 335 G~~a~~~Le~~gI~~Nk-n~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
+..+.+.|.+.||++-. ...|+ .+..+|+.. -.++|++.+-+-+.++++.
T Consensus 311 a~~~~~~L~~~gIlVR~~~~~p~------l~~~lRisi-------gt~een~~ll~aL~~i~ea 361 (362)
T PRK04781 311 AEAAFQALLAAGVVVRDQRAVPR------LSDALRITI-------GTPEQNDRVLAALQRTQEA 361 (362)
T ss_pred HHHHHHHHHHCCCEEEECCCCCC------CCCEEEEEE-------CCHHHHHHHHHHHHHHHHH
T ss_conf 99999999949939970788789------999799980-------9999999999999999962
No 185
>KOG1360 consensus
Probab=99.36 E-value=1.5e-10 Score=94.03 Aligned_cols=318 Identities=19% Similarity=0.212 Sum_probs=205.1
Q ss_pred CHHHHHHHHCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHH--CCCCEE
Q ss_conf 989999830510288657988875336006-79999999999999871886301000016799999999831--548748
Q gi|254780349|r 46 SRAVLEAQGSILTNKYAEGYPSKRYYGGCQ-YVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALM--HPGDSF 122 (433)
Q Consensus 46 S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~-~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl--~pGD~I 122 (433)
.|.|++|.-- --+||--|--|-|...|+. +.-++|.-..++ -+-+-| .-.-|+..||-+++..|. -||=.|
T Consensus 187 Hp~V~~A~~~-tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~L----HqK~aA-LlFsSCfVANDstLftLak~lpgcei 260 (570)
T KOG1360 187 HPEVLDAMHD-TLDRHGAGAGGTRNISGHSKHHVRLEAELADL----HQKEAA-LLFSSCFVANDSTLFTLAKKLPGCEI 260 (570)
T ss_pred CHHHHHHHHH-HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH----HCCCCE-EEEEEEEECCCHHHHHHHHHCCCCEE
T ss_conf 8279999999-99971888677654677871355599999988----467610-35542134164589999977899688
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH---CCCEEEEECCCCCC---CCCHHHHHHH
Q ss_conf 81233448411147665433333220136658323565989999999860---46678970552435---3637999988
Q gi|254780349|r 123 MGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEY---NPKLIIVGGTAYSR---VWDWERFRSI 196 (433)
Q Consensus 123 l~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~---kPklIi~G~S~y~~---~~d~~~l~eI 196 (433)
.+ +.|-|.|.=. .-+.-++--+ +-+. =|.|.++++..+. .||+|-+. |+|+. ..|++++.++
T Consensus 261 ~S---D~gNHASMI~----GIrns~v~K~-IFrH---ND~~hL~~lL~~~~~svPKivAFE-tVhSM~GavcpleelcDv 328 (570)
T KOG1360 261 FS---DEGNHASMIQ----GIRNSRVPKH-IFRH---NDLDHLEQLLQSSPKSVPKIVAFE-TVHSMDGAVCPLEELCDV 328 (570)
T ss_pred EC---CCCCHHHHHH----HHHHCCCCCE-EECC---CCHHHHHHHHHHCCCCCCCEEEEE-EEECCCCCCCCHHHHHHH
T ss_conf 53---6653388887----7651597522-4246---998999999975798888268876-640267775778999778
Q ss_pred HHHCCCEEEECCCCHHHHHH---HHCC--CCCCCCCCEEEECCCCCCCCCCCEEEEECCCCHHHHCCHHHCHHH--HHHH
Q ss_conf 64179789918620124432---0001--232200235674045652256744898336205650166465432--2344
Q gi|254780349|r 197 ADSIGAYLMADISHISGLVV---GGQH--PSPVPHCHIVTTTTHKSLRGPRGGLIMTNHADLAKKINSAIFPGL--QGGP 269 (433)
Q Consensus 197 a~~~ga~l~~D~aH~~GLIa---~g~~--~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~avfPg~--qg~~ 269 (433)
|+++||+...|.-|-.||.- +|+- +--+...|++++|.-|.| |--||-|.... .+-+-|.+ --||. ..+.
T Consensus 329 ah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKaf-GcVGGYIAat~-~LvDmiRS-yAaGFIFTTSL 405 (570)
T KOG1360 329 AHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAF-GCVGGYIAATR-KLVDMIRS-YAAGFIFTTSL 405 (570)
T ss_pred HHHHCCEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHC-CCCCCEEHHHH-HHHHHHHH-HCCCEEEECCC
T ss_conf 87717545310123100215777876656775203220014045541-66542330044-69999997-46866873379
Q ss_pred HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEE
Q ss_conf 55666899999999735648999999998889999998616852334588898126316655676799999888567188
Q gi|254780349|r 270 FMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAESILGRVSITC 349 (433)
Q Consensus 270 ~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~ 349 (433)
-++.+++-.-+..-....|++..-.|--+|-+.+-+.|.+.|++|+. +++|+|-+.+.+-.+.-+.-...+++.||.|
T Consensus 406 PP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiPVi~--~pSHIiPv~vgda~l~~~~sd~Li~~h~iYv 483 (570)
T KOG1360 406 PPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIPVIP--NPSHIIPVRVGDAALAKQASDILISKHNIYV 483 (570)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCCCEEEEECCCHHHHHHHHHHHHHHCCEEE
T ss_conf 82888728999999863254789999999999999999874986347--8865333550677777777899887527578
Q ss_pred ---ECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf ---03789989999888985122466673079998999999999999960
Q gi|254780349|r 350 ---NKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 350 ---Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
|.-+||-.++ -+||--.. +-.++-|..+-+-+.++-+
T Consensus 484 QaINyPTV~rG~E------~LRiaPTP----~HT~~mm~~lv~~l~~vw~ 523 (570)
T KOG1360 484 QAINYPTVARGTE------RLRIAPTP----HHTPQMMNILVNALLDVWN 523 (570)
T ss_pred EECCCCCCCCCCE------EEECCCCC----CCCHHHHHHHHHHHHHHHH
T ss_conf 8526874566601------34217999----8878999999999999999
No 186
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.35 E-value=2.9e-09 Score=84.98 Aligned_cols=315 Identities=18% Similarity=0.206 Sum_probs=199.1
Q ss_pred HCCCCCCCCCCCC--HHHHHHHHCCC--CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC-CCCEECCCHHHHHHH
Q ss_conf 3888104301029--89999830510--288657988875336006799999999999998718-863010000167999
Q gi|254780349|r 34 DEIQLIASENIVS--RAVLEAQGSIL--TNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFN-VNFVNVQSHSGSQMN 108 (433)
Q Consensus 34 ~~l~LiASEN~~S--~~v~~~l~S~l--~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~-a~~anvqp~SG~~An 108 (433)
.-+-|-+.||... |.+.++..-.+ .+||-+. ++.+- .+...+.++ .+-.+|=...|+..-
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~~~~rYPd~----------~~~~l-----~~a~a~~~~~~~~~~V~~gnGsde~ 87 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALDKLNRYPDP----------DYREL-----RAALAEYYGVVDPENVLVGNGSDEL 87 (356)
T ss_pred CCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCC----------CHHHH-----HHHHHHHHCCCCCCEEEEECCHHHH
T ss_conf 55462478899999899999999878886429996----------17999-----9999998479980239982784899
Q ss_pred -HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--
Q ss_conf -99999831548748812334484111476654333332201366583235659899999998604667897055243--
Q gi|254780349|r 109 -QGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS-- 185 (433)
Q Consensus 109 -~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~-- 185 (433)
..++.+++.|||+|+......+-|- ..+....-+.+..+.++ ..+|.|.+.+.+.+ ++++|++.....|
T Consensus 88 i~~l~~~~~~~gd~vl~~~Ptf~~Y~-----~~a~~~g~~~~~v~~~~--~~~d~~~~~~~~~~-~~~lv~i~nPNNPTG 159 (356)
T COG0079 88 IELLVRAFVEPGDTVLIPEPTFSMYE-----IAAQLAGAEVVKVPLKE--FRLDLDAILAAIRD-KTKLVFLCNPNNPTG 159 (356)
T ss_pred HHHHHHHHHCCCCEEEECCCCHHHHH-----HHHHHCCCEEEEECCCC--CCCCHHHHHHHHCC-CCCEEEEECCCCCCC
T ss_conf 99999996178985998178807889-----99997698699944644--44588999865146-888899959959988
Q ss_pred CCCCHHHHHHHHHHC--CCEEEECCCCHHHHHHHHCCCCCCCCCC--EEEECCCC--CCCCCCCEEEEECCCCHHHHCCH
Q ss_conf 536379999886417--9789918620124432000123220023--56740456--52256744898336205650166
Q gi|254780349|r 186 RVWDWERFRSIADSI--GAYLMADISHISGLVVGGQHPSPVPHCH--IVTTTTHK--SLRGPRGGLIMTNHADLAKKINS 259 (433)
Q Consensus 186 ~~~d~~~l~eIa~~~--ga~l~~D~aH~~GLIa~g~~~~Pl~~AD--vvt~sTHK--tl~GPrgGiI~~~~~e~~~~i~~ 259 (433)
..++-++++++++.. ++++++|.|-+ -+.- --.-..+.+.+ +|.-|.-| .|+|-|=|..+.+ +++.+.+++
T Consensus 160 ~~~~~~~l~~l~~~~~~~~~vVvDEAY~-eF~~-~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~-~~~i~~l~~ 236 (356)
T COG0079 160 TLLPREELRALLEALPEGGLVVIDEAYI-EFSP-ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIAN-PELIAALNK 236 (356)
T ss_pred CCCCHHHHHHHHHHCCCCCEEEEECCCC-CCCC-CHHHHHHCCCCCEEEEECCHHHHCCCHHCEEEHCCC-HHHHHHHHH
T ss_conf 8769999999998387885899977531-0278-245455214898899954678640211333402089-999999998
Q ss_pred HHCHHHHHHHHHHHHHHH-HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCEEEECCCCCCCCHHH
Q ss_conf 465432234455666899-999999735648999999998889999998616852-334588898126316655676799
Q gi|254780349|r 260 AIFPGLQGGPFMHSIAAK-AVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFD-IVSGGTDNHLMLVDLRSKRMTGKR 337 (433)
Q Consensus 260 avfPg~qg~~~~~~iaa~-aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~-vv~ggTd~H~vlvdl~~~~~~G~~ 337 (433)
..-|--.+++ +.. |++..+ ..+..++..+++......|.+.|...|+. |.. ++..-+|+++.. +- ...
T Consensus 237 vr~p~~v~~~-----a~~aa~aal~-~~~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~p--S~aNFvlv~~~~-~~-~~~ 306 (356)
T COG0079 237 VRPPFNVSSP-----ALAAAIAALR-DADYLEESVERIREERERLYAALKALGLFGVFP--SQANFVLVRVPD-AE-AAA 306 (356)
T ss_pred HCCCCCCCHH-----HHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCEEEEECCC-CC-HHH
T ss_conf 3078888899-----9999998602-489999999999999999999997379870155--888779997586-21-999
Q ss_pred HHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99988856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 338 AESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 338 a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
+.+.|.+.||++-... . .+..+..+||.+. .++|++.+-+-+.+++.
T Consensus 307 l~~~L~~~giivR~~~----~-~~~~~~~lRitvg-------t~een~~ll~AL~~~~~ 353 (356)
T COG0079 307 LAEALLKKGILVRDCS----S-VGLLPGYLRITVG-------TPEENDRLLAALREVLK 353 (356)
T ss_pred HHHHHHHCCEEEEECC----C-CCCCCCEEEEECC-------CHHHHHHHHHHHHHHHH
T ss_conf 9999987898998577----7-7888875999659-------88999999999999873
No 187
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase; InterPro: IPR011821 Proteins in this entry are important in the interconversion of the sulphur-containing amino acids L-cysteine and L-methionine in bacteria. In bacteria, inorganic sulphur is reduced to sulphide, which is then used to displace the acetyl group of O-acetyl-L-serine to form the essential amino acid L-cysteine. Biosynthesis of L-methionine then occurs via the transsulphuration pathway which involves the sequential action of two pyridoxal 5'-phosphate (PLP) enzymes, cystathionine gamma-synthase (CGS) and cystathionine beta-lyase (CBL). Firstly CGS catalyses the formation of the intermediate cystathione from a homoserine ester and L-cysteine. This intermediate is then converted by CBL to L-homoserine, which is subsequently methylated by methionine synthase to form L-methionine. For more information see . The CGS enzyme (P00935 from SWISSPROT) from Escherichia coli is, like other CGS enzymes, a homotetramer composed of two catalytically active dimers . The active site of each dimer is found at the interface between the monomers and involves residues from each monomer. Catalysis occurs by alpha,gamma-elimination/replacement reactions..
Probab=99.34 E-value=6.6e-12 Score=103.40 Aligned_cols=291 Identities=21% Similarity=0.235 Sum_probs=177.1
Q ss_pred HHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 9987188630100001679999999983154874881233448411147665433--33322013665832356598999
Q gi|254780349|r 88 AKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMS--GKWFKAIPYNVRKEDGLLDMHEI 165 (433)
Q Consensus 88 a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~--g~~~~~~~y~~d~~~~~ID~d~~ 165 (433)
.-+|=+-+-|-|-+ ||+.|-.-+..+||+|+|-|+++.-..||=+ +-.+.. -..|++.. ||. =|-+.+
T Consensus 60 LA~LE~G~~AVvT~-~GMsAI~L~~~~lL~pdDLlvAPHDCYGGtY---RLl~~lA~kG~~~v~f--VDQ----~D~~al 129 (383)
T TIGR02080 60 LAELEGGAGAVVTN-SGMSAIDLVTTALLGPDDLLVAPHDCYGGTY---RLLNALAKKGQFKVQF--VDQ----SDEQAL 129 (383)
T ss_pred HHHHHCCCCCEECC-CHHHHHHHHHHHEECCCCEEEECCCCCCCHH---HHHHHHHHCCCEEEEE--EEC----CHHHHH
T ss_conf 99984899825668-5689887664312078976880432677048---8886452078338998--607----628999
Q ss_pred HHHHHHHC-CCEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCCCCCCCC
Q ss_conf 99998604-667897055243--53637999988641797899186201244320001232200-235674045652256
Q gi|254780349|r 166 ESLAIEYN-PKLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTHKSLRGP 241 (433)
Q Consensus 166 ~~~a~~~k-PklIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKtl~GP 241 (433)
++ |...| ||||++...+.| |..|+++|..+++++|+.++||..-. ...||+||.- ||+|-.||-|-|=|-
T Consensus 130 ~~-ALa~kdPKLVlIEtPSNPLlRVVDI~~lc~La~~~G~~vvVDNTFL-----sP~lQ~PL~LGAD~V~HS~TKYlNGH 203 (383)
T TIGR02080 130 EA-ALAQKDPKLVLIETPSNPLLRVVDIAKLCKLAKAVGAVVVVDNTFL-----SPILQQPLSLGADLVIHSTTKYLNGH 203 (383)
T ss_pred HH-HHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCC-----CHHHCCCCCHHCCEEHHHHHCCCCCC
T ss_conf 99-9974698479986799885218889999988761883899855216-----77672753011113011111000340
Q ss_pred C---CEEEEECCCCHHHHCCHH-HCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-
Q ss_conf 7---448983362056501664-65432234455666899999999735648999999998889999998616852334-
Q gi|254780349|r 242 R---GGLIMTNHADLAKKINSA-IFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVS- 316 (433)
Q Consensus 242 r---gGiI~~~~~e~~~~i~~a-vfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~- 316 (433)
- +|.+.++++.+.+++... -.=|..|+|.=.= ..|+=.-+ -..-+.+-=+||+...+.|+..- +|.
T Consensus 204 SDVi~GaVIaKd~q~~e~L~WW~N~lG~tG~aFDSY-----~tLRGlRT--L~~Rm~~~qrnA~~Iv~yL~~~P--~V~k 274 (383)
T TIGR02080 204 SDVIAGAVIAKDPQLAEELAWWANALGVTGGAFDSY-----LTLRGLRT--LAARMRSQQRNAQTIVEYLQTQP--LVKK 274 (383)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHH-----HHHHHHHH--HHHHHHHHHHHHHHHHHHHHCCC--CEEE
T ss_conf 343121240147122344333430025544434688-----99867888--88888888788999999984489--4026
Q ss_pred ---CC---CCCCEEEEC-------CCCCCCCHHH--HHHHHHHCCEEEECCCCCCCCCC-CCCCCCCCCCCHHHHHCCCC
Q ss_conf ---58---889812631-------6655676799--99988856718803789989999-88898512246667307999
Q gi|254780349|r 317 ---GG---TDNHLMLVD-------LRSKRMTGKR--AESILGRVSITCNKNSIPFDPES-PFITSGIRLGTPSGTTRGFK 380 (433)
Q Consensus 317 ---gg---Td~H~vlvd-------l~~~~~~G~~--a~~~Le~~gI~~Nkn~iP~D~~~-~~~~sGiRlGT~aiTtrG~~ 380 (433)
-| -.-|-|--. +=|+.+.|.+ +.+-|.....-+=- +| .-+-|=| ==-..||=|+|+
T Consensus 275 ~YyPgLpdH~GH~IA~~QQ~GFGAmlSFEL~G~~~~v~~FL~~L~LFtLA-------ESLGGVESLi-aHPATMTH~aM~ 346 (383)
T TIGR02080 275 VYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEEAVRRFLGKLSLFTLA-------ESLGGVESLI-AHPATMTHAAMG 346 (383)
T ss_pred EECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCHHHH-------HHHCCHHHHH-CHHHCCCCHHHH
T ss_conf 33587888667699986256543302333218868999998431401212-------3315512333-301012602101
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf 89999999999999602577621179999999
Q gi|254780349|r 381 EKDFEYIGELIAQILDGSSSDEENHSLELTVL 412 (433)
Q Consensus 381 e~em~~iA~li~~~L~~~~~~~~~~~~~~~ir 412 (433)
++ -++-|.|=...|+-..-.|+.+..++.|-
T Consensus 347 ~e-AR~~AGI~~~LLRlSvGlED~~DLiaDL~ 377 (383)
T TIGR02080 347 PE-ARAEAGISDTLLRLSVGLEDADDLIADLD 377 (383)
T ss_pred HH-HHHHCCCCCCCCEEEEEECCHHHHHHHHH
T ss_conf 89-89745841142000210034688999999
No 188
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.34 E-value=3.5e-09 Score=84.44 Aligned_cols=326 Identities=14% Similarity=0.101 Sum_probs=178.1
Q ss_pred HHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC----E-ECCCHHHH
Q ss_conf 83888104301--02989999830510288657988875336006799999999999998718863----0-10000167
Q gi|254780349|r 33 NDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNF----V-NVQSHSGS 105 (433)
Q Consensus 33 ~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~----a-nvqp~SG~ 105 (433)
++-|+|-..|- -+++.+.+++...+.+.. +| +-..-.-++-+-..+..++-|+..+ . +|-..+|+
T Consensus 29 ~~iI~L~iG~Pd~~~P~~v~ea~~~al~~~~--~Y------~~~~G~~~LReAia~~~~~~~~~~~~~dp~~~I~vt~Ga 100 (394)
T TIGR03538 29 LPPIALSIGEPKHATPAFVLEALRENLHGLS--TY------PTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGT 100 (394)
T ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHCCCC--CC------CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCH
T ss_conf 9878784888999977999999999843888--99------999886999999999999973988778967769989888
Q ss_pred -HHHHHHHHHHHCCCCE--EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHCCCEEEEEC
Q ss_conf -9999999983154874--881233448411147665433333220136658323-565989999999860466789705
Q gi|254780349|r 106 -QMNQGVFLALMHPGDS--FMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-GLLDMHEIESLAIEYNPKLIIVGG 181 (433)
Q Consensus 106 -~An~av~~ALl~pGD~--Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~~ID~d~~~~~a~~~kPklIi~G~ 181 (433)
+|...++.+++.|||. |+..+...-.+. ...... ..+.+.+++++++ ..+|+|++++.+. .|.|+|++-.
T Consensus 101 ~~al~~~~~~l~~pGd~~~V~~p~P~Y~~y~---~~~~~~--g~~~~~v~~~~e~~~~~d~~~l~~~~~-~~tk~iil~s 174 (394)
T TIGR03538 101 REALFAFAQAVINPGQAPLVVMPNPFYQIYE---GAALLA--GAEPYFLNCTAENGFLPDFDAVPESVW-RRCQLLFVCS 174 (394)
T ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCCH---HHHHHC--CCEEEECCCCCCCCCCCCHHHHHHHCC-CCCEEEEECC
T ss_conf 9999999999729998108994788664529---999975--998997586734588889999987452-3665999889
Q ss_pred CCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCC--CCC-C--------C-EEEECCCCCC--CCCC
Q ss_conf 5243-----53637999988641797899186201244320001232--200-2--------3-5674045652--2567
Q gi|254780349|r 182 TAYS-----RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSP--VPH-C--------H-IVTTTTHKSL--RGPR 242 (433)
Q Consensus 182 S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~P--l~~-A--------D-vvt~sTHKtl--~GPr 242 (433)
...| -.-+++++.++|++.|.+++.|..+. .|+-.+..+.| +.. + . |+..|.-|++ +|=|
T Consensus 175 P~NPTG~v~s~~~l~~l~~~a~~~~i~iisDE~Y~-~l~~d~~~~p~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R 253 (394)
T TIGR03538 175 PGNPTGAVLSLETLKKLIELADQYGFIIASDECYS-ELYFDEANPPAGLLQAAAALGRDDFRRCLVFHSLSKRSNLPGLR 253 (394)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCC-CEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCE
T ss_conf 99998977787999999999732676999806833-27857888973787777662544447679995565444546751
Q ss_pred CEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCC
Q ss_conf 44898336205650166465432234455666899999999735648999999998889999998616852334-58889
Q gi|254780349|r 243 GGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVS-GGTDN 321 (433)
Q Consensus 243 gGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~-ggTd~ 321 (433)
-|.+.... ++.+++.+.-.-...+.+...+.|+.+. +.. ....++..+...++-..+.+.|.+ .+++.. .|+
T Consensus 254 iG~~~~~~-~~i~~~~~~~~~~~~~~~~~~q~a~~aa-~~~--~~~~~~~r~~~~~r~~~~~~~L~~-~~~~~~P~Gg-- 326 (394)
T TIGR03538 254 SGFVAGDA-EILKAFLRYRTYHGCAMPPPTQLASIAA-WND--EQHVRENRALYREKFAAVLEILGP-VLDLELPDAG-- 326 (394)
T ss_pred EEEEECCH-HHHHHHHHHCCCCCCCCCHHHHHHHHHH-HCC--HHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCEE--
T ss_conf 79995799-9999999852237426899999999998-489--899999999999999999998642-7962579854--
Q ss_pred CEEEECCCCCCCCHHH-HHHHHHHCCEEEECCCCCCCCC--CC--CC--CCCCCCCCHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 8126316655676799-9998885671880378998999--98--88--985122466673079998999999999999
Q gi|254780349|r 322 HLMLVDLRSKRMTGKR-AESILGRVSITCNKNSIPFDPE--SP--FI--TSGIRLGTPSGTTRGFKEKDFEYIGELIAQ 393 (433)
Q Consensus 322 H~vlvdl~~~~~~G~~-a~~~Le~~gI~~Nkn~iP~D~~--~~--~~--~sGiRlGT~aiTtrG~~e~em~~iA~li~~ 393 (433)
=.+|+++.. +..+ +...|+++|+.+- ||.-- .. .. ..-|||.-. ..++++++-.+-|.+
T Consensus 327 ~y~w~~~~~---~~~~f~~~ll~e~gV~v~----PG~~F~~~~~~~~~G~g~iR~s~~------~~~e~l~ea~~Rl~~ 392 (394)
T TIGR03538 327 FYLWPKVPG---DDEAFARALYEEENVTVL----PGRYLSREAEGVNPGAGRVRIALV------APLEECVEAAERIRR 392 (394)
T ss_pred EEEEEECCC---CHHHHHHHHHHHCCEEEE----CCHHHCCCCCCCCCCCCEEEEEEC------CCHHHHHHHHHHHHH
T ss_conf 899996899---999999999986899998----773416554578889998999975------989999999999998
No 189
>PRK06855 aminotransferase; Validated
Probab=99.32 E-value=5.5e-09 Score=83.07 Aligned_cols=347 Identities=17% Similarity=0.167 Sum_probs=184.8
Q ss_pred HHHHHHHH--HHH-HHHHCCCCCCCCC-----CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999--999-9983888104301-----029899998305102886579888753360067999999999999987
Q gi|254780349|r 20 DVFSLIGQ--ESC-RQNDEIQLIASEN-----IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKL 91 (433)
Q Consensus 20 ei~~~i~~--e~~-rq~~~l~LiASEN-----~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~l 91 (433)
+|-+++.+ |.+ .-++-|+|-..|= -++..+++++.-..-+-...||. -..-+.++-+-..+..++-
T Consensus 16 ~Ir~i~~~A~~l~~~G~~Ii~L~iGeP~~~df~tP~~i~ea~~~a~~~~~~~~Yt------~s~G~~eLReaIA~~~~~~ 89 (433)
T PRK06855 16 EIRNIVNVAKKLEKLGIKINWENIGDPIAKGEKIPLWMKEIVSELVMDDKSYGYC------PTRGVLETREFLAELTNKR 89 (433)
T ss_pred EHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC------CCCCCHHHHHHHHHHHHHH
T ss_conf 1988999999999779976574698969899998889999999998589998869------9888499999999999987
Q ss_pred CCCCC--EECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHH
Q ss_conf 18863--0100001679999999983154874881233448411147665433333220136658323-56598999999
Q gi|254780349|r 92 FNVNF--VNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-GLLDMHEIESL 168 (433)
Q Consensus 92 F~a~~--anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~~ID~d~~~~~ 168 (433)
+|.++ -||=..+|+..-+..+++++.|||.||.++... .++... .........+.|++++++ ..+|.+++++.
T Consensus 90 ~g~~~~pd~I~vt~Ga~~ai~~~~~~l~pgdeVlip~P~Y---p~Y~~~-~~~~~g~~pv~~~l~~e~~f~~d~e~l~~~ 165 (433)
T PRK06855 90 GGAQITPDDILFFNGLGDAIAKIYGFLRREARVLGPSPAY---STHSSA-EAAHAGCEPVTYRLDPEDNWYPDLDDLENK 165 (433)
T ss_pred CCCCCCHHHEEEECCHHHHHHHHHHHCCCCCEEEECCCCC---CCCHHH-HHHHCCCEEEEEECCHHCCCCCCHHHHHHH
T ss_conf 3999987898895776999999999628999899627887---350999-999689868999557101877899999999
Q ss_pred HHH-HCCCEEEEECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CC---EEEECCCCC
Q ss_conf 986-04667897055243-----53637999988641797899186201244320001232200--23---567404565
Q gi|254780349|r 169 AIE-YNPKLIIVGGTAYS-----RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CH---IVTTTTHKS 237 (433)
Q Consensus 169 a~~-~kPklIi~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--AD---vvt~sTHKt 237 (433)
++. -+.|.|++-....| -.-+++++.++|.+.+.+++.|.. +..|+-.|....++.. .| ++..|.-|+
T Consensus 166 i~~~~~~kaiii~nP~NPTG~v~s~e~l~~i~~~a~~~~i~visDEi-Y~~l~ydg~~~~s~~~~~~~~~~i~~ns~SK~ 244 (433)
T PRK06855 166 VKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIIADEI-YANIVYNGKKTVPLSEVIGDVPGIALKGISKE 244 (433)
T ss_pred HHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECC-CCCCEECCCCCCCHHHHCCCCCEEEEEEEHHC
T ss_conf 86699724999838999988667999999999999975986986310-11245489876388996675773798200103
Q ss_pred CC--CCCCEEEE-ECC--CCHHHHCCHHHCHHHH---HHHHHHHHHHHHHHHHHHHCHHHHHHH----HHHHHHHHHHHH
Q ss_conf 22--56744898-336--2056501664654322---344556668999999997356489999----999988899999
Q gi|254780349|r 238 LR--GPRGGLIM-TNH--ADLAKKINSAIFPGLQ---GGPFMHSIAAKAVAFGEALSSEFRDYA----KQIVLNSQALAK 305 (433)
Q Consensus 238 l~--GPrgGiI~-~~~--~e~~~~i~~avfPg~q---g~~~~~~iaa~aval~Ea~~~~f~~Ya----~qvv~NA~~La~ 305 (433)
+. |=|.|.+. ++. .+..+++-+++.-..+ ..+.+.+.|+ +... ..+++..|. +..-+-...+.+
T Consensus 245 ~~mtGwRiG~~~~~~~~~~~~~~~~~~~i~~~~~~~~cs~~~~Q~a~---~a~l-~~~~~~~~~~e~~~~y~~RRd~l~~ 320 (433)
T PRK06855 245 LPWPGSRCGWIEVYNAEKDPVFKKYIKSILDAKMIEVCSTTLPQKAI---PAIM-SHPEYKPYLEERNSRYEKRSNIAYE 320 (433)
T ss_pred CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH---HHHH-CCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89763126788631577369999999999987742758138999999---9985-5984379999999999999999999
Q ss_pred HHHHC-CCCCCC-CCCCCCEEEEC-------------------------CCCCCCC--HHHHHHHHHHCCEEEECCCCCC
Q ss_conf 98616-852334-58889812631-------------------------6655676--7999998885671880378998
Q gi|254780349|r 306 KLQFL-GFDIVS-GGTDNHLMLVD-------------------------LRSKRMT--GKRAESILGRVSITCNKNSIPF 356 (433)
Q Consensus 306 ~L~~~-G~~vv~-ggTd~H~vlvd-------------------------l~~~~~~--G~~a~~~Le~~gI~~Nkn~iP~ 356 (433)
.|.+- |+.... .|+- -+|+. ..+.++. -.-+.+.|++.||.| |||
T Consensus 321 ~L~~ipGv~~~~P~GAF--Y~fv~~~~~~l~~~~~lp~~~~~~~~~~~~~~~~~~~~D~~f~~~LLee~gVav----VPG 394 (433)
T PRK06855 321 YLKDIPGLKVNRTNGAF--YMTVVFEDGVLNNRQSLPIENAEVRELVESLVKQGVAPDKRFVYYLLASTGICV----VPL 394 (433)
T ss_pred HHHCCCCCEECCCCCCE--EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEE----ECC
T ss_conf 99569993716997115--875305532356322466555467888876541278867999999998559999----657
Q ss_pred CCCCCC--CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 999988--898512246667307999899999999999996
Q gi|254780349|r 357 DPESPF--ITSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 357 D~~~~~--~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
++| ...|.|+ |-.-..|+-++.|-.+|++-+
T Consensus 395 ---S~FG~~~~gfRi-----t~l~~~E~~~E~i~r~~~e~~ 427 (433)
T PRK06855 395 ---SSFCTELNGFRV-----TLLERDEEKFEWIYRTLAEKI 427 (433)
T ss_pred ---CCCCCCCCCEEE-----EECCCCHHHHHHHHHHHHHHH
T ss_conf ---112899996699-----957970799999999999999
No 190
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.32 E-value=1.1e-09 Score=88.07 Aligned_cols=265 Identities=21% Similarity=0.232 Sum_probs=162.5
Q ss_pred HHHHHHHHCCCC-CEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 999999871886-3010000167999999998315487488123344841114766543333322013665832356598
Q gi|254780349|r 84 AIERAKKLFNVN-FVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDM 162 (433)
Q Consensus 84 a~~~a~~lF~a~-~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~ 162 (433)
..+..++-||.. +--|-..--|.|-++..+||.+||.+|+..-.+..+|-|--......|.. .+..
T Consensus 59 ~~~~g~~HlgG~~e~~v~~NRTSsailAtIlaL~~~~~~Vvh~vPe~paHPSI~rsc~lagae-------------y~E~ 125 (346)
T TIGR03576 59 VQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCKLAGAE-------------YFES 125 (346)
T ss_pred HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEECCCC-------------EEEC
T ss_conf 999999873998325777456269999999983578870589787878999730200514871-------------4750
Q ss_pred HHHHHHHHHHCCCEEEE-ECCCCCCCC---CHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCC--CCC-CCEEEECCC
Q ss_conf 99999998604667897-055243536---37999988641797899186201244320001232--200-235674045
Q gi|254780349|r 163 HEIESLAIEYNPKLIIV-GGTAYSRVW---DWERFRSIADSIGAYLMADISHISGLVVGGQHPSP--VPH-CHIVTTTTH 235 (433)
Q Consensus 163 d~~~~~a~~~kPklIi~-G~S~y~~~~---d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~P--l~~-ADvvt~sTH 235 (433)
|.++++.....+.++++ |..+-.+.+ +++++-++|++.|+.+++|-|--+-| --+|..| +++ ||++.+||-
T Consensus 126 d~~~el~~~d~~slvviTgstmd~~vi~~d~~k~vI~~Ak~~~a~V~vDDAsGARv--R~L~gq~~al~lGADLvVTS~D 203 (346)
T TIGR03576 126 DELSELKKIDGTSLVVITGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARV--RRLYGQPPALDLGADLVVTSTD 203 (346)
T ss_pred CCHHHHCCCCCCCEEEEECCCCCCEECCHHHHHHHHHHHHHCCCEEEEECCCCCCH--HHHCCCCCCCCCCCCEEEEEHH
T ss_conf 66776276788718999378777300457889999999874698499854888751--6651999865556426884002
Q ss_pred CCCCCCCCEEEEECCCCHHHHCCHHHC-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 652256744898336205650166465-4322344556668999999997356489999999988899999986168523
Q gi|254780349|r 236 KSLRGPRGGLIMTNHADLAKKINSAIF-PGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDI 314 (433)
Q Consensus 236 Ktl~GPrgGiI~~~~~e~~~~i~~avf-Pg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~v 314 (433)
|.+.|||+|++..++ |+-++|-.-.+ -|+ -.+.-.+||..-||.+ .++ +-+++|-.=++.+..+-++-
T Consensus 204 KlM~GPR~GlLaG~~-eLV~ki~~~~~~~Gl--Eaq~Pi~aAmv~aLe~-f~~-------~~l~~a~~r~~~~~l~~~~~ 272 (346)
T TIGR03576 204 KLMDGPRGGLLAGRK-ELVDKIKSVGEQFGL--EAQAPLLAAVVRALEE-FEL-------SRIRDAFKRKEEVYLRLFDK 272 (346)
T ss_pred HCCCCCCCCEECCCH-HHHHHHHHHHHHCCC--CCCCCHHHHHHHHHHC-CCH-------HHHHHHHHHHHHHHHHHHHC
T ss_conf 126677541122888-999999999875277--7784159999999970-799-------99999999999988765303
Q ss_pred C-CCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEE-CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf 3-45888981263166556767999998885671880-378998999988898512246667307999899999999
Q gi|254780349|r 315 V-SGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCN-KNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGE 389 (433)
Q Consensus 315 v-~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~N-kn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~ 389 (433)
+ .-.|-+-.|.-.+.... --..+-..|+..||++= --+.|+-.++ ||+- +..+|-+.|.+
T Consensus 273 l~~e~TptGf~ik~~~~e~-~~~~~~~LL~~ygIiTIta~Gmpgaskt------lR~d--------~~skDAeri~~ 334 (346)
T TIGR03576 273 LNVERTPTGFVIKGVEEEK-LIEIGLDLLRNYGIITITAVGMPGASKT------LRFD--------LAAKDAERIGD 334 (346)
T ss_pred CCCCCCCCEEEEECCCHHH-HHHHHHHHHHHCCEEEEECCCCCCCCCE------EEEE--------EECCCHHHHCH
T ss_conf 5743278537985656888-8999999999769489834778887632------6876--------20251655157
No 191
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.32 E-value=3.5e-09 Score=84.48 Aligned_cols=319 Identities=16% Similarity=0.160 Sum_probs=192.5
Q ss_pred HHHCCCCCCCCCC--CCHHHHHHHHCCCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHH
Q ss_conf 9838881043010--298999983051028--865798887533600679999999999999871886301000016799
Q gi|254780349|r 32 QNDEIQLIASENI--VSRAVLEAQGSILTN--KYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQM 107 (433)
Q Consensus 32 q~~~l~LiASEN~--~S~~v~~~l~S~l~n--kyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~A 107 (433)
..+-|.|=..||. +||.|++++...+.. || |.. ++.+ | ++...+-+|.+.-+|=+.+|+.-
T Consensus 21 ~~~iidlSsN~NP~gppp~v~~ai~~~~~~~~~Y----Pd~------~~~~----L-r~aiA~~~gv~~e~I~~gnGs~E 85 (358)
T PRK07392 21 PSAILDFSASINPLGPPESVIAAIQSALSALRHY----PDP------DYRE----L-REALAQHHQLPPEWILPGNGAAE 85 (358)
T ss_pred HHHCEECCCCCCCCCCCHHHHHHHHHHHHHHHHC----CCC------CHHH----H-HHHHHHHHCCCHHHEEECCCHHH
T ss_conf 9984660899999898989999999988888648----995------6899----9-99999985958888987757999
Q ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-CCCEEEEECCCCC-
Q ss_conf 99999983154874881233448411147665433333220136658323565989999999860-4667897055243-
Q gi|254780349|r 108 NQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEY-NPKLIIVGGTAYS- 185 (433)
Q Consensus 108 n~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~-kPklIi~G~S~y~- 185 (433)
-+......+.+||+|+.+....+.+- ......|. +++.++++.++. .+.+.+....... +.++|++.....|
T Consensus 86 li~~~~~~~~~~~~v~i~~Ptf~~Y~---~~~~~~g~--~v~~vpl~~~~~-~~~~~~~~~~~~~~~~~~i~l~nPNNPT 159 (358)
T PRK07392 86 LLTWAGRELAQLREVYLLTPAFGDYR---RALRAFGA--TVKELPLPLSGE-ASLTELQLLPPQLTPNDGLLLNNPHNPT 159 (358)
T ss_pred HHHHHHHHHCCCCEEEEECCCCHHHH---HHHHHCCC--EEEEEECCCCCC-CCCCHHHHHHHCCCCCCEEEECCCCCCC
T ss_conf 99999999758986999578518999---99998398--899985775556-7820567887558998789976899997
Q ss_pred -CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC----CC-EEEECCCCCC--CCCCCEEEEECCCCHHHHC
Q ss_conf -53637999988641797899186201244320001232200----23-5674045652--2567448983362056501
Q gi|254780349|r 186 -RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH----CH-IVTTTTHKSL--RGPRGGLIMTNHADLAKKI 257 (433)
Q Consensus 186 -~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~----AD-vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i 257 (433)
..++-+++.+++++. .++++|.|.. -++-....++.++. -+ ||+.|.-|++ +|=|-|.++++. ++.+++
T Consensus 160 G~~~~~~~l~~l~~~~-~~vvvDEaY~-ef~~~~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRlGy~ia~~-~~i~~l 236 (358)
T PRK07392 160 GKLWSREAILPLLEQF-ALVVVDEAFM-DFLPPAAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHP-DRLQRW 236 (358)
T ss_pred CCCCCHHHHHHHHHCC-CEEEEECHHH-HHCCCCCCCCHHHHHHCCCCEEEEEECHHHHHCCCCCCEEEECCH-HHHHHH
T ss_conf 7656879999886328-9999957155-416886556789997535867999616287657441000002399-999999
Q ss_pred CHHHCHHHHHHHHHHHHHHHHH-HHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCEEEECCCCCCCC
Q ss_conf 6646543223445566689999-9999735648-999999998889999998616-852334588898126316655676
Q gi|254780349|r 258 NSAIFPGLQGGPFMHSIAAKAV-AFGEALSSEF-RDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHLMLVDLRSKRMT 334 (433)
Q Consensus 258 ~~avfPg~qg~~~~~~iaa~av-al~Ea~~~~f-~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~vlvdl~~~~~~ 334 (433)
++..-|.- .|.++..|. +..+ ..+| +...+.+.+.-..|.+.|.+. |+.+.. ++..-+|++... +
T Consensus 237 ~~~~~p~~-----vn~~a~~aa~aal~--~~~~~~~~~~~~~~~R~~l~~~L~~l~g~~v~p--s~anF~l~~~~~---~ 304 (358)
T PRK07392 237 QQWRDPWP-----VNGLAAAAAIAALA--DRDFQQQTWAWLPPAREALFQGLASLPGLTPLP--SAANFLLVQSQG---S 304 (358)
T ss_pred HHHCCCCC-----CCHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC--CCCEEEEEECCC---C
T ss_conf 98538877-----78999999999825--999999999999999999999997189977888--850499997699---9
Q ss_pred HHH-HHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 799-999888567188037899899998889851224666730799989999999999999602
Q gi|254780349|r 335 GKR-AESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 335 G~~-a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
..+ .++.|++.||.+... ..-+..-..-|||.. -.++|++.+-+-+.++|..
T Consensus 305 ~~~~~~~ll~~~gI~Vr~~----~~f~~~g~~~iRisv-------gt~een~~li~al~~iLa~ 357 (358)
T PRK07392 305 ALQLQEELLQQHRILIRDC----LSFPELGDRYFRVAV-------RTEAENQRLLSALAAILAN 357 (358)
T ss_pred HHHHHHHHHHCCCEEEEEC----CCCCCCCCCEEEEEE-------CCHHHHHHHHHHHHHHHHC
T ss_conf 9999999997198899868----888888999899983-------9999999999999999706
No 192
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.29 E-value=4.5e-09 Score=83.69 Aligned_cols=332 Identities=18% Similarity=0.244 Sum_probs=207.3
Q ss_pred HCCCCCCC-------CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-CCCCCEECCCHHHH
Q ss_conf 38881043-------01029899998305102886579888753360067999999999999987-18863010000167
Q gi|254780349|r 34 DEIQLIAS-------ENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKL-FNVNFVNVQSHSGS 105 (433)
Q Consensus 34 ~~l~LiAS-------EN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~l-F~a~~anvqp~SG~ 105 (433)
+-+||-.. +.++-|+|++|..-.+.+.....|.+-. |--+|.+.+..|+--.-... ..-+-+-||..||+
T Consensus 27 ~KvnLgvGvYrde~G~~~vl~aVk~Ae~~l~~~~~~k~Ylpi~--G~~~f~~~~~~L~fG~~~~~~~~~rv~~vQt~gGT 104 (397)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKSYLPIE--GLAAYNQAVQELLFGADSPAIAAGRVATVQTPGGT 104 (397)
T ss_pred CCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC--CCHHHHHHHHHHHCCCCCHHHHHCCEEEEECCCCH
T ss_conf 7477302378999989166579999999997378998787978--77999999999842787556662525888547753
Q ss_pred HHHHHH--HHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC-EEEEECC
Q ss_conf 999999--9983154874881233448411147665433333220136658323565989999999860466-7897055
Q gi|254780349|r 106 QMNQGV--FLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPK-LIIVGGT 182 (433)
Q Consensus 106 ~An~av--~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPk-lIi~G~S 182 (433)
-|.... |..-..|+.+|...+..-+-|.. -....|..++.++| +|++++.+|+|.+.+-++.-.++ +|++-++
T Consensus 105 GAlrl~a~fl~~~~p~~~v~is~PtW~Nh~~---If~~aGl~v~~Y~y-~d~~t~~ldf~~~~~~L~~a~~gsvvlLh~c 180 (397)
T PRK09257 105 GALRVGADFLKRAFPDAKVWVSDPTWPNHRA---IFEAAGLEVKTYPY-YDAATKGLDFDGMLADLSQAPAGDVVLLHGC 180 (397)
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCHHHHH---HHHHCCCEEEEEEE-ECCCCCCCCHHHHHHHHHHCCCCCEEEEECC
T ss_conf 6899999999985899869976999620389---99977980577655-6454576289999999982899998997256
Q ss_pred C------CCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCC--CCCC-C----C-EEEECCCCCC--CCCCCEEE
Q ss_conf 2------435363799998864179789918620124432000123--2200-2----3-5674045652--25674489
Q gi|254780349|r 183 A------YSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPS--PVPH-C----H-IVTTTTHKSL--RGPRGGLI 246 (433)
Q Consensus 183 ~------y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~--Pl~~-A----D-vvt~sTHKtl--~GPrgGiI 246 (433)
. -|-...|+++.+++.+-+.+.++|+| +-|+= .|.-.+ ++++ + + +|..|.-|+| -|-|-|.+
T Consensus 181 cHNPTG~D~t~eqW~~ia~~~~~k~l~p~~D~A-YqGf~-sGl~~Da~~iR~f~~~~~e~lva~SfSKnfgLY~eRvG~l 258 (397)
T PRK09257 181 CHNPTGADLTPEQWDEVAELLKERGLIPFLDIA-YQGFG-DGLEEDAYGLRLFAAAGLELLVASSFSKNFGLYGERVGAL 258 (397)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHH-CCCCC-CCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEE
T ss_conf 679889998999999999999966986888400-14334-6689999999999972885799840375433346775038
Q ss_pred --EECCCCHHHHCCHH---HCHHHHHHHHHH--HHHHHHH---HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC-C
Q ss_conf --83362056501664---654322344556--6689999---99997356489999999988899999986168523-3
Q gi|254780349|r 247 --MTNHADLAKKINSA---IFPGLQGGPFMH--SIAAKAV---AFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDI-V 315 (433)
Q Consensus 247 --~~~~~e~~~~i~~a---vfPg~qg~~~~~--~iaa~av---al~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~v-v 315 (433)
++++++..+++.+. +.-.+-|+|-.| +|++.-. .|......|-+...+++...-+.|.+.|.+.|-.- +
T Consensus 259 ~vv~~~~~~~~~v~s~l~~~~R~~~S~PP~hGA~iv~~IL~d~~L~~~W~~El~~m~~Ri~~~R~~L~~~L~~~~~~~~w 338 (397)
T PRK09257 259 SVVAEDAEEAARVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEQELAEMRDRIKAMRQLLVEALKAKGPDRDF 338 (397)
T ss_pred EEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99818888999999999999973458898389999999967999999999999999999999999999999975899996
Q ss_pred CC-CCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 45-88898126316655676799999888567188037899899998889851224666730799989999999999999
Q gi|254780349|r 316 SG-GTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQI 394 (433)
Q Consensus 316 ~g-gTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~ 394 (433)
.- -..+-++. -.|++-.+++..-++.+|..- .+| ||..+. +.++.++.+|+-|++|
T Consensus 339 ~~i~~q~GmFs----~~gls~~qv~~Lr~~~~IYl~-------------~~G-RIniaG-----Ln~~ni~~vA~AI~~V 395 (397)
T PRK09257 339 SFILRQRGMFS----YSGLTPEQVDRLREEFGIYAV-------------GSG-RINVAG-----LNEDNIDYVAKAIAAV 395 (397)
T ss_pred HHHHHCCCEEE----CCCCCHHHHHHHHHHCCEEEC-------------CCC-EEEEEC-----CCHHHHHHHHHHHHHH
T ss_conf 26750766056----689799999999984725146-------------995-689820-----7766389999999998
Q ss_pred HH
Q ss_conf 60
Q gi|254780349|r 395 LD 396 (433)
Q Consensus 395 L~ 396 (433)
++
T Consensus 396 ~~ 397 (397)
T PRK09257 396 LK 397 (397)
T ss_pred HC
T ss_conf 59
No 193
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.27 E-value=5.7e-09 Score=82.97 Aligned_cols=307 Identities=16% Similarity=0.173 Sum_probs=178.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC---C
Q ss_conf 999999999999838881043010--29899998305102886579888753360067999999999999987188---6
Q gi|254780349|r 21 VFSLIGQESCRQNDEIQLIASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNV---N 95 (433)
Q Consensus 21 i~~~i~~e~~rq~~~l~LiASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a---~ 95 (433)
|.++..+...+-++.|+|-..|.- +++.+++++.....+ .+ |.-.+-..++-+-..+..++-+|. +
T Consensus 9 ~~~~~~~~~~~~~~vI~L~iG~Pd~p~p~~i~~a~~~a~~~---~~------Y~~~~G~~eLReaia~~~~~~~g~~~~~ 79 (357)
T TIGR03539 9 LAPYKAKAASHPDGIVDLSVGTPVDPVPPLIRAALAAAADA---PG------YPQTWGTPELREAIVDWLERRRGVPGLD 79 (357)
T ss_pred HHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCC---CC------CCCCCCCHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999988868999288879999999899999999971247---99------8998477999999999999971999799
Q ss_pred CEECCCHHHHHHHHHHH-HHH-HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 30100001679999999-983-1548748812334484111476654333332201366583235659899999998604
Q gi|254780349|r 96 FVNVQSHSGSQMNQGVF-LAL-MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYN 173 (433)
Q Consensus 96 ~anvqp~SG~~An~av~-~AL-l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~k 173 (433)
.-||-..+|+..-+..+ ..+ ++|||.|+..+...-.+.. .....| .+.+. + |.+++ ....+
T Consensus 80 ~~~I~vt~G~~~al~~l~~~l~~~pGD~Vli~~P~y~~y~~---~~~~~g--~~~v~--~---------d~~~~-~~~~~ 142 (357)
T TIGR03539 80 PTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEV---GALLAG--ATPVA--A---------DDPTE-LDPVG 142 (357)
T ss_pred CCEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHH---HHHHCC--CEEEE--C---------CCHHH-CCCCC
T ss_conf 57599868879999999999707999989978887700899---999859--98982--3---------88666-79778
Q ss_pred CCEEEEECCCCC--C---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCC-------CCC-EEEECCCCCC--
Q ss_conf 667897055243--5---363799998864179789918620124432000123220-------023-5674045652--
Q gi|254780349|r 174 PKLIIVGGTAYS--R---VWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVP-------HCH-IVTTTTHKSL-- 238 (433)
Q Consensus 174 PklIi~G~S~y~--~---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~-------~AD-vvt~sTHKtl-- 238 (433)
+|+|++.....| . .-+++++.++|++.+.+++.|..| ..++-.+..++++. +.. |+..|.-|++
T Consensus 143 ~k~i~l~~P~NPTG~v~s~~~l~~l~~~a~~~~i~visDEiY-~~~~~~~~~~s~l~~~~~~~~~~~~i~~~S~SK~~~~ 221 (357)
T TIGR03539 143 PDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECY-LELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNL 221 (357)
T ss_pred CEEEEECCCCCCCHHCCCHHHHHHHHHHCCCCEEEEECHHHH-HHHCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCCCC
T ss_conf 549998999896232082889999987320555899523324-7653589884302864537675767999615310045
Q ss_pred CCCCCEEEEECCCCHHHHCCHHH-CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-
Q ss_conf 25674489833620565016646-5432234455666899999999735648999999998889999998616852334-
Q gi|254780349|r 239 RGPRGGLIMTNHADLAKKINSAI-FPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVS- 316 (433)
Q Consensus 239 ~GPrgGiI~~~~~e~~~~i~~av-fPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~- 316 (433)
+|=|-|.+..++ ++.+++.+.. +.++ ..+...+.|+ +.++.+ .....+..+...++-..|.+.|.+.|+++..
T Consensus 222 ~G~RiG~~~~~~-~li~~l~~~~~~~~~-~~~~~~q~a~-~~al~~--~~~~~~~~~~~~~rr~~l~~~L~~~g~~~~~p 296 (357)
T TIGR03539 222 AGYRAGFVAGDP-ALVAELLTVRKHAGL-MVPAPVQAAM-VAALGD--DGHVAEQKARYAARRAQLKPALEKAGFRIDHS 296 (357)
T ss_pred CCCEEEEEECCH-HHHHHHHHHHHHCCC-CCCHHHHHHH-HHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
T ss_conf 561289996799-999999999985677-7889999999-999569--27899999999999999999998579776268
Q ss_pred CCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCC---CCCCC
Q ss_conf 58889812631665567679999988856718803789989999888985---12246
Q gi|254780349|r 317 GGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSG---IRLGT 371 (433)
Q Consensus 317 ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sG---iRlGT 371 (433)
.|+ -.+|++. +.++....+.|.+.|+.+. ||. .|-+.| +||.-
T Consensus 297 ~g~--~y~~~~~---~~~~~~~~~~l~e~gV~v~----PG~---~Fg~~g~~~vRis~ 342 (357)
T TIGR03539 297 EAG--LYLWATR---GEDAWDTVDRLAELGILVA----PGD---FYGPAGSQHVRVAL 342 (357)
T ss_pred CEE--EEEEEEC---CCCHHHHHHHHHHCCEEEE----CCC---CCCCCCCCEEEEEE
T ss_conf 806--9998758---9999999999996998994----787---44789999799997
No 194
>PRK08637 hypothetical protein; Provisional
Probab=99.26 E-value=1.2e-08 Score=80.75 Aligned_cols=274 Identities=13% Similarity=0.130 Sum_probs=156.0
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC--C
Q ss_conf 0000167999999998315487488123344841114766543-333322013665832356598999999986046--6
Q gi|254780349|r 99 VQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNM-SGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNP--K 175 (433)
Q Consensus 99 vqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~-~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kP--k 175 (433)
|+...|+.|-..+..++++|||+|+..+..-+-|- ..... .|. .+..|+.-.+++.+|.|.+.+.++...+ +
T Consensus 73 v~T~Ggt~al~~~~~~~~~~gd~Vlip~P~W~ny~---~i~~~~~G~--~v~~y~~~~~~~~~~~~~~~~~l~~~~~~~~ 147 (386)
T PRK08637 73 IVTNALTHGLSLVADLFVNQGDTVLLPDHNWGNYK---LVFNTRNGA--NLQTYPIFDKDGHFTTDALVEALQAAYNKDK 147 (386)
T ss_pred EECCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHH---HHHHHHCCC--CEEEEEEECCCCCCCHHHHHHHHHHCCCCCC
T ss_conf 87574689999999998479998999179854179---999983798--4167742646789781999999984577883
Q ss_pred -EEEEECCCCC-----CCCCHHHHHHHHHHC-----CCEEEECCCCHHHHHHHHCCCCC-C---CC--CC---EEEECCC
Q ss_conf -7897055243-----536379999886417-----97899186201244320001232-2---00--23---5674045
Q gi|254780349|r 176 -LIIVGGTAYS-----RVWDWERFRSIADSI-----GAYLMADISHISGLVVGGQHPSP-V---PH--CH---IVTTTTH 235 (433)
Q Consensus 176 -lIi~G~S~y~-----~~~d~~~l~eIa~~~-----ga~l~~D~aH~~GLIa~g~~~~P-l---~~--AD---vvt~sTH 235 (433)
++++.....| -.-+|+++.+++.+. +.+++.|.+ +.||+.++..... + .. -. ++..|.-
T Consensus 148 vvll~n~phNPTG~~~t~ee~~~i~~~~~~~~~~g~~i~~i~D~a-Y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~S 226 (386)
T PRK08637 148 VILILNFPNNPTGYTPTHKEVTTIVEAIKALADKGTKVIAVVDDA-YYGLFYEDVYKESLFTALANLHSNILAVKLDGAT 226 (386)
T ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHH-HHHHHCCCCCCCHHHHHHHCCCCCEEEEEECCCC
T ss_conf 899987899988868999999999999998773388889999601-4566308843224999862157764899961310
Q ss_pred CCC--CCCCCEEEE--ECCCCHHHHCCHHH---CHHHHHHHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHH----H
Q ss_conf 652--256744898--33620565016646---543223445566689999999--9735648999999998889----9
Q gi|254780349|r 236 KSL--RGPRGGLIM--TNHADLAKKINSAI---FPGLQGGPFMHSIAAKAVAFG--EALSSEFRDYAKQIVLNSQ----A 302 (433)
Q Consensus 236 Ktl--~GPrgGiI~--~~~~e~~~~i~~av---fPg~qg~~~~~~iaa~aval~--Ea~~~~f~~Ya~qvv~NA~----~ 302 (433)
|+| .|=|-|.+. +.+++..+++.+.+ .-..-|+|-.+.-.+.+.+|. +....+++++-+.+.+-.+ .
T Consensus 227 K~~~myG~RvG~l~~~~~~~~~~~~~~~~~~~~~r~~~Snpp~~gq~~~~~~L~~~~~~~~e~~e~~~~m~~R~~~~~~~ 306 (386)
T PRK08637 227 KEFFAWGFRVGFITFGTSDQTTKEVLEAKVKGLIRSNISSGPHPSQSAVLHVLKNPDQFDKEIEQKIQILKERYEVTKEV 306 (386)
T ss_pred CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 12557002315788605989999999999999986044885689999999997590889999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCC-EEEECCCCCCCCHHHH-HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCC
Q ss_conf 99998616852334588898-1263166556767999-998885671880378998999988898512246667307999
Q gi|254780349|r 303 LAKKLQFLGFDIVSGGTDNH-LMLVDLRSKRMTGKRA-ESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFK 380 (433)
Q Consensus 303 La~~L~~~G~~vv~ggTd~H-~vlvdl~~~~~~G~~a-~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~ 380 (433)
|.+.+.+.++....- .+- ..++.+ .+.+..+. ...|++.+|-+ ||+. ..+|||.-+ |+.
T Consensus 307 l~~~~~~~~~~~~p~--~~G~F~~i~~--~~~~~e~l~~~Lle~~~V~~----v~~g------~~~iRIs~a-----als 367 (386)
T PRK08637 307 VYDDQYDDHWQAYPF--NSGYFMCLKL--KDVDAEELRVHLLEKYGIGV----IALN------ETDLRIAFS-----CVE 367 (386)
T ss_pred HHCCCCCCCCCCCCC--CCEEEEEECC--CCCCHHHHHHHHHHCCCEEE----EECC------CCCEEEEEE-----ECC
T ss_conf 742043568632456--7615886479--98999999999986395899----9559------997799998-----588
Q ss_pred HHHHHHHHHHHHHHHHC
Q ss_conf 89999999999999602
Q gi|254780349|r 381 EKDFEYIGELIAQILDG 397 (433)
Q Consensus 381 e~em~~iA~li~~~L~~ 397 (433)
+++++++++-|.++|+.
T Consensus 368 ~~nI~~~~~~I~~al~~ 384 (386)
T PRK08637 368 EEDIPHVFDSIAKAIDD 384 (386)
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 99999999999999985
No 195
>TIGR01979 sufS cysteine desulfurases, SufS subfamily; InterPro: IPR010970 Cysteine desulphurases are pyridoxal-phosphate enzymes which catalyse the removal of sulphur from L-cysteine to form L-alanine and elemental sulphur. These enzymes have been shown to play an important role in the biosynthesis of iron-sulphur clusters, thionucleosides in tRNA, thiamine, biotin, lipoate and molydopterin This entry represents a subfamily of NifS-related cysteine desulphurases that are often involved in iron-sulphur cluster formation, which is needed for nitrogen fixation and other vital functions . Many of these enzymes, in addition to cysteine desulphurase activity, also show selenocysteine lyase activity where L-selenocysteine is converted to L-alanine and selenide . Some of these enzymes are much more specific for selenocysteine than cysteine and are thus believed to function in selenium metabolism rather than sulphur metabolism. Structural studies of the E. coli and Synechocystis enzymes indicate that they are homodimers which show a similar fold to other members of the alpha family of pyridoxal-phosphate enzymes .; GO: 0030170 pyridoxal phosphate binding, 0031071 cysteine desulfurase activity, 0006534 cysteine metabolic process.
Probab=99.26 E-value=1.6e-09 Score=86.87 Aligned_cols=318 Identities=18% Similarity=0.258 Sum_probs=207.5
Q ss_pred CHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCE-ECCCHHHHH--HHHHHHHHH---HCC-
Q ss_conf 9899998305102886579888753360067999999999999987188630-100001679--999999983---154-
Q gi|254780349|r 46 SRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFV-NVQSHSGSQ--MNQGVFLAL---MHP- 118 (433)
Q Consensus 46 S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~a-nvqp~SG~~--An~av~~AL---l~p- 118 (433)
+..|.+++..=.++-||-=+=|- |+-+.+-.|..|. ++++.++.-||+.. ++=..+|++ =|+.++.-- ++.
T Consensus 32 P~~Vida~~~yY~~~nANVHRG~-H~Ls~~AT~~YE~-~R~kva~FiNA~~~~EIvFT~gtTe~iNLvA~s~g~~~l~~a 109 (409)
T TIGR01979 32 PQAVIDAVEEYYRKSNANVHRGI-HTLSVRATEAYEE-AREKVAKFINAASAEEIVFTRGTTESINLVAYSWGRSRLKAA 109 (409)
T ss_pred CHHHHHHHHHHHHHHCCCCCHHH-HHHHHHHHHHHHH-HHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCCCHHH
T ss_conf 47799999999875167001689-9999999999999-999999850889985478707602788999998311013425
Q ss_pred ---CCEEEECCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEE-EEECCCCCC-CCC
Q ss_conf ---87488123344841114766543----333322013665832356598999999986046678-970552435-363
Q gi|254780349|r 119 ---GDSFMGLSLDSGGHLTHGSSVNM----SGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLI-IVGGTAYSR-VWD 189 (433)
Q Consensus 119 ---GD~Il~~~l~~GGHlshg~~~~~----~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklI-i~G~S~y~~-~~d 189 (433)
||.|+.--.+| |..-+-+ .-++......++| ++|.||+|.++++ ...|+||| |..-|+-+- ..|
T Consensus 110 v~pGDeIv~s~mEH-----HaNiVPWQ~l~~r~GA~lk~~~l~-~~G~ld~~~l~~~-~~~~TKlVa~~HvSNVlGtvnP 182 (409)
T TIGR01979 110 VDPGDEIVISEMEH-----HANIVPWQLLAERTGATLKFIPLD-DDGTLDLDDLEEL-LTEKTKLVAITHVSNVLGTVNP 182 (409)
T ss_pred CCCCCEEEECCHHH-----HCCHHHHHHHHHHHCCEEEEEECC-CCCEEEHHHHHHH-HHCCCEEEEEEEEECCCCCCCC
T ss_conf 38988798401110-----012147999997609878997448-8760518889988-3269829999742022030148
Q ss_pred HHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCC--C--CCEEEECCCCCCCCCCC-EEEEECCCCHHHHC-------
Q ss_conf 799998864179789918620124432000123220--0--23567404565225674-48983362056501-------
Q gi|254780349|r 190 WERFRSIADSIGAYLMADISHISGLVVGGQHPSPVP--H--CHIVTTTTHKSLRGPRG-GLIMTNHADLAKKI------- 257 (433)
Q Consensus 190 ~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~--~--ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~i------- 257 (433)
+++|.++|+++||++++|+||-. .-. |++ . ||+.-+|-||-+ ||-| |++-.|+ |+=+++
T Consensus 183 ~~ei~~~AH~~GA~vlvDGAQ~~-----pH~--pvDv~~ldcDFyvFSGHKmy-GPtGiGVLYGK~-~lLe~MPPf~gGG 253 (409)
T TIGR01979 183 VEEIIKLAHQVGAKVLVDGAQAV-----PHM--PVDVQALDCDFYVFSGHKMY-GPTGIGVLYGKE-ELLEEMPPFLGGG 253 (409)
T ss_pred HHHHHHHHHHCCCEEEEECCCCC-----CCC--CCCHHHHCCCEEEEECCHHH-CCCCCEEEHHHH-HHHHHCCCCCCCC
T ss_conf 78999998657976998625575-----898--98856557874456100452-576630112788-9886477846698
Q ss_pred --------CH-HHCHH-----HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCC--
Q ss_conf --------66-46543-----2234455666899999999735648999999998889999998616-8523345888--
Q gi|254780349|r 258 --------NS-AIFPG-----LQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVSGGTD-- 320 (433)
Q Consensus 258 --------~~-avfPg-----~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd-- 320 (433)
++ +.|-. ==|.|....+-|++.|+.....=.+..=.....+=...+-+.|.+- |++|.+ -++
T Consensus 254 ~MI~~V~~~~g~ty~~~P~KFEAGTPniagviGLgaAidYl~~iG~~~I~~~E~~L~~yal~~L~~ipg~~iyG-P~~~~ 332 (409)
T TIGR01979 254 EMIEEVSLEEGTTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEKIGLEKIEAHEKELTAYALERLGEIPGLRIYG-PRDAE 332 (409)
T ss_pred CEEEEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEC-CCCCC
T ss_conf 61578880577113678754568883589999999999998523878999999999999999960189858746-87743
Q ss_pred CCEEEECCCCCCCCHHHHHHHHHHCCEEEE---CCCCCCCCCCCCCCCCCCCCCHHHHHCCC----CHHHHHHHHHHH
Q ss_conf 981263166556767999998885671880---37899899998889851224666730799----989999999999
Q gi|254780349|r 321 NHLMLVDLRSKRMTGKRAESILGRVSITCN---KNSIPFDPESPFITSGIRLGTPSGTTRGF----KEKDFEYIGELI 391 (433)
Q Consensus 321 ~H~vlvdl~~~~~~G~~a~~~Le~~gI~~N---kn~iP~D~~~~~~~sGiRlGT~aiTtrG~----~e~em~~iA~li 391 (433)
.-.=+|-+.=.|+=..++...|++-||-|= .|+-|.. -|+|.++..|=-+ .++|++.+.+=+
T Consensus 333 ~R~g~isFn~~g~HpHDVg~~LD~~GiAvR~GHHCAqPlm---------~~~~v~atcRASf~~YNT~ediD~Lv~aL 401 (409)
T TIGR01979 333 DRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCAQPLM---------RRFGVPATCRASFYLYNTEEDIDALVEAL 401 (409)
T ss_pred CCCCEEEECCCCCCCCHHHHHCCCCCCEEEECCHHHHHHH---------HHCCCCEEEEEEEEECCCHHHHHHHHHHH
T ss_conf 2643333025888700223012267756861705324898---------65599636788741038989999999999
No 196
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.25 E-value=6.8e-09 Score=82.45 Aligned_cols=341 Identities=17% Similarity=0.143 Sum_probs=180.2
Q ss_pred HHHHHHHHHH---HHCCCCCC-------CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999---83888104-------30102989999830510288657988875336-0067999999999999987
Q gi|254780349|r 23 SLIGQESCRQ---NDEIQLIA-------SENIVSRAVLEAQGSILTNKYAEGYPSKRYYG-GCQYVDDIENIAIERAKKL 91 (433)
Q Consensus 23 ~~i~~e~~rq---~~~l~LiA-------SEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~-G~~~~d~iE~la~~~a~~l 91 (433)
..+-.|..++ +..||++- .-+..||.+.++....+. .|.+ -.||- ..+++.++- ...+..+.+
T Consensus 7 ~~~~~~i~~~~~l~~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~-~~v~----Le~~l~~g~~~~R~~-~~~~~~~~~ 80 (395)
T COG1921 7 AATVREIKSRLRLRRVINAIGTVLMTNLGRSLYSPEAIEAMKEAMR-APVE----LETDLKTGKRGARLT-ELAELLCGL 80 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHC-CCCE----EEEECCCCHHHHHHH-HHHHHHHCC
T ss_conf 6678999977503666524322100127876679899999999850-5430----356401231357779-999998366
Q ss_pred CCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 18863010000167999999998315487488123344-84111476654333332201366583235659899999998
Q gi|254780349|r 92 FNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDS-GGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAI 170 (433)
Q Consensus 92 F~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~-GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~ 170 (433)
++++-+=+ ...-+.|-+.+..++.+++..|+..-..- |||..-....-.+|-.+.-+ +-...+..=|| + ++.
T Consensus 81 ~~aea~~i-vnnn~aAVll~~~al~~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~Ev--G~tn~t~~~d~---~-~AI 153 (395)
T COG1921 81 TGAEAAAI-VNNNAAAVLLTLNALAEGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEV--GTTNRTHLKDY---E-LAI 153 (395)
T ss_pred CCHHHEEE-ECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHCCCEEEEE--CCCCCCCHHHH---H-HHH
T ss_conf 44033256-78828999998763205771799713115688998667999719779981--56576778889---9-885
Q ss_pred HHCCCEEE-EECCCCCCC--CCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCC---CCC-CCEEEECCCCCCCCCCC
Q ss_conf 60466789-705524353--637999988641797899186201244320001232---200-23567404565225674
Q gi|254780349|r 171 EYNPKLII-VGGTAYSRV--WDWERFRSIADSIGAYLMADISHISGLVVGGQHPSP---VPH-CHIVTTTTHKSLRGPRG 243 (433)
Q Consensus 171 ~~kPklIi-~G~S~y~~~--~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~P---l~~-ADvvt~sTHKtl~GPrg 243 (433)
..+-++++ +=.|.|.|. .+.+.+.+||++.|..+++|.+--. +|- .-|++ +.. ||+|++|++|-|.|||+
T Consensus 154 ne~ta~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~aSg~-~v~--~e~~l~~~la~GaDLV~~SgdKllgGPqa 230 (395)
T COG1921 154 NENTALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLASGA-LVD--KEPDLREALALGADLVSFSGDKLLGGPQA 230 (395)
T ss_pred CCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCC-CCC--CCCCHHHHHHCCCCEEEEECCHHCCCCCC
T ss_conf 458705899950366614645599999999876997799667763-003--55445688860797899754011279854
Q ss_pred EEEEECCCCHHHHCCHHH--CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH----HHHHHHHHHHCCCCCCCC
Q ss_conf 489833620565016646--54322344556668999999997356489999999988----899999986168523345
Q gi|254780349|r 244 GLIMTNHADLAKKINSAI--FPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLN----SQALAKKLQFLGFDIVSG 317 (433)
Q Consensus 244 GiI~~~~~e~~~~i~~av--fPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~N----A~~La~~L~~~G~~vv~g 317 (433)
|+|+.++ |+-+++.+.- ++--.+ --.+||+-.||+.-.+++-..--...++- +.+|.+.....-..+.+.
T Consensus 231 Gii~GkK-elI~~lq~~~l~Ralrv~---K~tla~l~~aLe~y~~~~~~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~~ 306 (395)
T COG1921 231 GIIVGKK-ELIEKLQSHPLKRALRVD---KETLAALEAALELYLQPEILGERLRTLRLLTQPAEALLAQAGRLAVVELDP 306 (395)
T ss_pred CEEECHH-HHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
T ss_conf 3374249-999999762133433158---276899999999870801344355788743127999998753045530266
Q ss_pred CCCCCEEEECCC--CCCCC-HHHHHHHHHHCC-EEEECCCCCCCCC-CCCCCCCCCCCCHHHHHCCCCHHHHHHH
Q ss_conf 888981263166--55676-799999888567-1880378998999-9888985122466673079998999999
Q gi|254780349|r 318 GTDNHLMLVDLR--SKRMT-GKRAESILGRVS-ITCNKNSIPFDPE-SPFITSGIRLGTPSGTTRGFKEKDFEYI 387 (433)
Q Consensus 318 gTd~H~vlvdl~--~~~~~-G~~a~~~Le~~g-I~~Nkn~iP~D~~-~~~~~sGiRlGT~aiTtrG~~e~em~~i 387 (433)
.. |.+-|... ...++ |....+.+...- |++-++.+ +.. .-..+-.+|-....+..|+..+...-++
T Consensus 307 ~g--~~~~v~i~~~e~~ig~g~l~~~~~~~~~~~i~~~~~~--~~~~~~~l~~~~~~l~~~ii~r~~~~~~~~~~ 377 (395)
T COG1921 307 TG--DRLVVKIVSSESQIGSGSLPDELLPSLALIITPKYGI--RGGKLEGLPRRLRTLRVPIIARIAERILWLDL 377 (395)
T ss_pred CC--CCEEEEECHHHHCCCCCCCHHHHCCCCCEEEECCCCC--CCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHH
T ss_conf 78--7548996014421576524577545654388426653--32035422354424787556403234678988
No 197
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.24 E-value=1.9e-08 Score=79.38 Aligned_cols=322 Identities=14% Similarity=0.117 Sum_probs=192.3
Q ss_pred HHHCCCCCCCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHH
Q ss_conf 9838881043010--29899998305102886579888753360067999999999999987188630100001679999
Q gi|254780349|r 32 QNDEIQLIASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQ 109 (433)
Q Consensus 32 q~~~l~LiASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~ 109 (433)
..+-|-|=+.||. +|+.+++++...+.+ ..-|| ..++.+-. +...+.+|.+--+|-.-+|+.--+
T Consensus 19 ~~~iidlssNeNP~g~p~~v~~ai~~~~~~--~~rYP------d~~~~~Lr-----~~iA~~~gv~~~~I~vgnGs~Eli 85 (356)
T PRK08056 19 PDQLLDFSANINPLGMPVSVKRALIDNLDC--IERYP------DADYFHLH-----QALARHHQVPASWILAGNGETESI 85 (356)
T ss_pred HHHEEEECCCCCCCCCCHHHHHHHHHHHHH--HHCCC------CCCHHHHH-----HHHHHHHCCCHHHEEECCCHHHHH
T ss_conf 766777379999989999999999974757--74199------82489999-----999998298889988758789999
Q ss_pred HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHCCCEEEEECCCCCC--
Q ss_conf 9999831548748812334484111476654333332201366583235-6598999999986046678970552435--
Q gi|254780349|r 110 GVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDG-LLDMHEIESLAIEYNPKLIIVGGTAYSR-- 186 (433)
Q Consensus 110 av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~-~ID~d~~~~~a~~~kPklIi~G~S~y~~-- 186 (433)
..+...++|++.++. ....+.+ ....... ..+.+.++++++++ .+| +++.+ +...+||+|++.....|-
T Consensus 86 ~~i~~~~~~~~~~i~-~Ptf~~Y---~~~a~~~--g~~v~~~~l~~~~~~~~~-~~~~~-~~~~~~~lv~i~nPNNPTG~ 157 (356)
T PRK08056 86 FTVASGLKPRRAMIV-TPGFAEY---GRALAQV--GCEIRRWSLREADGWQLT-DAILE-ALTPDLDCLFLCTPNNPTGL 157 (356)
T ss_pred HHHHHHCCCCCEEEE-CCCHHHH---HHHHHHC--CCEEEEEECCHHHCCCCC-HHHHH-HCCCCCCEEEECCCCCCCCC
T ss_conf 999985489966997-8874999---9999985--976999867733158976-99997-33678888998189999887
Q ss_pred CCCHHHHHHH---HHHCCCEEEECCCCHHHHHHHHCCCCCC--CCCCE-EEECCCCC--CCCCCCEEEEECCCCHHHHCC
Q ss_conf 3637999988---6417978991862012443200012322--00235-67404565--225674489833620565016
Q gi|254780349|r 187 VWDWERFRSI---ADSIGAYLMADISHISGLVVGGQHPSPV--PHCHI-VTTTTHKS--LRGPRGGLIMTNHADLAKKIN 258 (433)
Q Consensus 187 ~~d~~~l~eI---a~~~ga~l~~D~aH~~GLIa~g~~~~Pl--~~ADv-vt~sTHKt--l~GPrgGiI~~~~~e~~~~i~ 258 (433)
.++-+.++++ |.+.+.++++|.|-+ -++....---|+ ++-++ |.-|.-|+ |+|=|=|..++.++...++++
T Consensus 158 ~~~~~~l~~l~~~~~~~~~~vvvDEAY~-ef~~~~~s~~~~~~~~~nlivlrTfSK~~glaGlRiGy~i~~~~~~i~~l~ 236 (356)
T PRK08056 158 LPERQLLQAIADRCKSLNINLILDEAFI-DFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMR 236 (356)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEEHHHH-HHCCCCCCHHHHHHCCCCEEEEEECCHHCCCCCCCHHHHHCCCHHHHHHHH
T ss_conf 5899999999987240493999744557-643586135799845997899841416406852000111058899999999
Q ss_pred HHHCHHHHHHHHHHHHHHHHHH-HHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCEEEECCCCCCCCHH
Q ss_conf 6465432234455666899999-999735648999999998889999998616-85233458889812631665567679
Q gi|254780349|r 259 SAIFPGLQGGPFMHSIAAKAVA-FGEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHLMLVDLRSKRMTGK 336 (433)
Q Consensus 259 ~avfPg~qg~~~~~~iaa~ava-l~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~vlvdl~~~~~~G~ 336 (433)
+...|.- .+.+|..|.. ..+ -+...+...+.+.+....|.+.|.+. |+.+.. +++.-+|+++.. ++.
T Consensus 237 ~~~~p~~-----vn~~a~~aa~~al~-d~~~~~~~~~~i~~~r~~l~~~L~~l~g~~v~p--s~aNFil~~~~~---~~~ 305 (356)
T PRK08056 237 RQQMPWS-----INALAALAGEVALQ-DSAWQQATWHWLREEGARFYQALCQLPLLTVYP--GRANYLLLRCER---EDI 305 (356)
T ss_pred HHCCCCC-----CCHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC--CCCCEEEEECCC---CHH
T ss_conf 6158998-----11999999999836-999999999999999999999986589978898--988789998899---999
Q ss_pred HHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 9999888567188037899899998889851224666730799989999999999999602
Q gi|254780349|r 337 RAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 337 ~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
+..+.|.+.||.+-... .-+.+...-+||.. -.++|++.+-+-+.++|.+
T Consensus 306 ~~~~~L~~~gIlVR~~~----~f~gl~~~~lRisi-------gt~~en~~ll~aL~~iL~g 355 (356)
T PRK08056 306 DLQRRLLTQRILIRSCA----NYPGLDSRYYRVAI-------RSAAQNERLLAALRNVLTG 355 (356)
T ss_pred HHHHHHHHCCEEEEECC----CCCCCCCCEEEEEC-------CCHHHHHHHHHHHHHHHCC
T ss_conf 99999996890997678----88999999899975-------9999999999999999737
No 198
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.23 E-value=1.2e-08 Score=80.78 Aligned_cols=319 Identities=16% Similarity=0.146 Sum_probs=190.7
Q ss_pred HHHCCCCCCCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHH
Q ss_conf 9838881043010--29899998305102886579888753360067999999999999987188630100001679999
Q gi|254780349|r 32 QNDEIQLIASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQ 109 (433)
Q Consensus 32 q~~~l~LiASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~ 109 (433)
.++-|.|-+.||. +||.|++++...+.. ..-||... +.+ | .+...+.+|.+--+|-+.+|+.--+
T Consensus 18 ~~~iidls~NeNP~g~p~~v~~a~~~~~~~--l~~YPd~~------~~~----L-r~aiA~~~gv~~~~I~~gnGs~e~i 84 (354)
T PRK06358 18 KNMILDFSANINPLGVPESVKDAITENLDK--LVEYPDID------YLE----L-RKRIASFEQLDLENVILGNGAAEVI 84 (354)
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHHH--HCCCCCCC------HHH----H-HHHHHHHHCCCHHHEEECCCHHHHH
T ss_conf 464888649998988899999999998766--10189997------799----9-9999998783879999868789999
Q ss_pred HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHCCCEEEEECCCCC--C
Q ss_conf 99998315487488123344841114766543333322013665832-35659899999998604667897055243--5
Q gi|254780349|r 110 GVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKE-DGLLDMHEIESLAIEYNPKLIIVGGTAYS--R 186 (433)
Q Consensus 110 av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~-~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~ 186 (433)
..+...++ +|+|+.+....+.+- ......| .+++.++++.+ +..+|.+.++++ ..++|+|++.....| .
T Consensus 85 ~~~~~~~~-~~~v~i~~Ptf~~Y~---~~~~~~g--~~v~~~~l~~~~~~~~~~~~l~~~--~~~~~~v~l~nPnNPTG~ 156 (354)
T PRK06358 85 FNIVRVLK-PKKVLILAPTFSEYE---RALKSVD--AEVIYYELKEETNFAINEDVLEKI--TEEIDLIFLCNPNNPTGQ 156 (354)
T ss_pred HHHHHHCC-CCEEEEECCCHHHHH---HHHHHCC--CEEEEEECCCCCCCCCCHHHHHHC--CCCCCEEEEECCCCCCCC
T ss_conf 99998618-996999798879999---9999849--867899777003888799999744--557778999689998664
Q ss_pred CCCHHHH---HHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC----CC-EEEECCCCC--CCCCCCEEEEECCCCHHHH
Q ss_conf 3637999---988641797899186201244320001232200----23-567404565--2256744898336205650
Q gi|254780349|r 187 VWDWERF---RSIADSIGAYLMADISHISGLVVGGQHPSPVPH----CH-IVTTTTHKS--LRGPRGGLIMTNHADLAKK 256 (433)
Q Consensus 187 ~~d~~~l---~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~----AD-vvt~sTHKt--l~GPrgGiI~~~~~e~~~~ 256 (433)
.++-+++ .+.|.+.+.++++|.|. .-++-.+...+.+++ -+ +|.-|.-|+ |+|=|=|.+++.++.+.++
T Consensus 157 ~~~~~~l~~l~~~~~~~~~~vviDEaY-~ef~~~~~~~s~~~~~~~~~nlivlrSfSK~~glaGlRiGy~i~~~~~i~~~ 235 (354)
T PRK06358 157 LISKEELKKILEKCEKKNIYVIIDEAF-MDFVEENETISMIKYLENFKNLIIIRAFTKFFAIPGLRLGYGLCSNKNLIEK 235 (354)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECHH-HHHHCCCCCCCHHHHHHHCCCEEEEEECCHHHCCCCHHEEEEEECCHHHHHH
T ss_conf 067999999998720178799996405-6763688766678887523766899725166367662115654287999999
Q ss_pred CCHHHCHHHHHHHHHHHHHHHHH-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCEEEECCCCCCCC
Q ss_conf 16646543223445566689999-9999735648999999998889999998616-852334588898126316655676
Q gi|254780349|r 257 INSAIFPGLQGGPFMHSIAAKAV-AFGEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHLMLVDLRSKRMT 334 (433)
Q Consensus 257 i~~avfPg~qg~~~~~~iaa~av-al~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~vlvdl~~~~~~ 334 (433)
+.+...|.-. +.++..|. +..+ -....+...+.+.++-+.|.+.|.+. |+.+.. ++..-+|+++..
T Consensus 236 l~~~~~p~~v-----n~~a~~aa~aal~-d~~~~~~~~~~~~~~R~~l~~~L~~l~g~~v~p--s~anFvl~~~~~---- 303 (354)
T PRK06358 236 LNQMREPWSI-----NTFADLAGRVLLE-DKNYIKKTIQWIKKEKEFLYNGLSEFKGLTVYE--PSVNFIFFKLNK---- 303 (354)
T ss_pred HHHCCCCCCH-----HHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC--CCCEEEEEEECC----
T ss_conf 9845899882-----6999999999952-999999999999999999999987499968889--984899998398----
Q ss_pred HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 7999998885671880378998999988898512246667307999899999999999996
Q gi|254780349|r 335 GKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 335 G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
+.++.+.|-+.||.+-..+ .-.+....=+||... .++|++.+-+-+.++|
T Consensus 304 ~~~~~~~L~~~gIlVr~~~----~f~~l~~~~iRisvg-------t~~en~~ll~aL~~iL 353 (354)
T PRK06358 304 PIDLRKELLLKGILIRSCS----NYRGLDENYYRVAVK-------SREDNKKLLEALSVIL 353 (354)
T ss_pred HHHHHHHHHHCCCEEEECC----CCCCCCCCEEEEEEC-------CHHHHHHHHHHHHHHH
T ss_conf 7999999985991999788----778889997999628-------9999999999999974
No 199
>KOG1359 consensus
Probab=99.23 E-value=8.6e-10 Score=88.68 Aligned_cols=302 Identities=21% Similarity=0.269 Sum_probs=199.6
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC
Q ss_conf 86579888753360067999999999999987188630100001679999999983154874881233448411147665
Q gi|254780349|r 60 KYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSV 139 (433)
Q Consensus 60 kyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~ 139 (433)
-|-.|..+-|+.-|++-+.+.-+ ....++-+-+-+-+.| ||..||++.|-|++.|-|-|++-.|.| .+-+
T Consensus 96 eyGaGlssvrfIcGtq~iHk~LE---~kiAqfh~rED~ilyp-scfdANag~feail~pedAvfSDeLNh------ASII 165 (417)
T KOG1359 96 EYGAGLSSVRFICGTQDIHKLLE---SKIAQFHGREDTILYP-SCFDANAGAFEAILTPEDAVFSDELNH------ASII 165 (417)
T ss_pred HHCCCCCCEEEEECCHHHHHHHH---HHHHHHHCCCCEEEEC-CCCCCCHHHHHHHCCHHHHHHCCCCCC------CHHH
T ss_conf 82878643168844557999999---9999870877548733-100344377877448254121000022------0343
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHH---HHHHHHHCCCEEEECCCCHHHHHH
Q ss_conf 43333322013665832356598999999986046678970552435363799---998864179789918620124432
Q gi|254780349|r 140 NMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWER---FRSIADSIGAYLMADISHISGLVV 216 (433)
Q Consensus 140 ~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~---l~eIa~~~ga~l~~D~aH~~GLIa 216 (433)
.|..+-- .|.-- ..-||+.-..-+-+.|-|+|+-+ ++|+..-|+.. +.+++.++|++|+.|.+|-.|+.-
T Consensus 166 --dGirLck-ry~h~---dv~~l~~~l~~a~k~r~klv~TD-g~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G 238 (417)
T KOG1359 166 --DGIRLCK-RYRHV---DVFDLEHCLISACKMRLKLVVTD-GVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFG 238 (417)
T ss_pred --HHHHHHH-HHCCC---HHHHHHHHHHHHHHHEEEEEEEC-CEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEC
T ss_conf --2467776-64451---26778887777433217999854-61214787333899999998629379986043105655
Q ss_pred ---HHCC--CCCCCCCCEEEECCCCCCCCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHH---HHHHHHHHHHHCHH
Q ss_conf ---0001--232200235674045652256744898336205650166465432234455666---89999999973564
Q gi|254780349|r 217 ---GGQH--PSPVPHCHIVTTTTHKSLRGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSI---AAKAVAFGEALSSE 288 (433)
Q Consensus 217 ---~g~~--~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~i---aa~aval~Ea~~~~ 288 (433)
+|.- -+-....|++.+|.-|.|.|..||.+-+-+ .+.+-|.+---|.+-++..+..+ ++++..+...
T Consensus 239 ~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp~-~li~llrqr~RpylFSnslppavV~~a~ka~dllm~---- 313 (417)
T KOG1359 239 ETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGPK-PLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMV---- 313 (417)
T ss_pred CCCCCHHHHHCCCCCCEEHHHHHHHHHCCCCCCCCCCCH-HHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHH----
T ss_conf 788873887377776402042456662477788746875-689999852886142178980554156999999986----
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE-ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCC-
Q ss_conf 8999999998889999998616852334588898126-31665567679999988856718803789989999888985-
Q gi|254780349|r 289 FRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLML-VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSG- 366 (433)
Q Consensus 289 f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vl-vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sG- 366 (433)
-....+.+-.|.+.+.+.....||.|.+ .+|-+- |-+.+..+ ..++++-|-+-||.|=--+ .|.+|.|
T Consensus 314 s~~~i~~~~a~~qrfr~~me~aGftIsg---~~hPI~pv~lGda~l-A~~~ad~lLk~Gi~Vigfs------~PvVP~gk 383 (417)
T KOG1359 314 SSKEIQSRQANTQRFREFMEAAGFTISG---ASHPICPVMLGDARL-ASKMADELLKRGIYVIGFS------YPVVPKGK 383 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEECC---CCCCCCCEECCCHHH-HHHHHHHHHHCCCEEEEEC------CCCCCCCC
T ss_conf 4799998988999999988752824317---888742323163888-8888999985571698625------87678884
Q ss_pred --CCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf --1224666730799989999999999999602
Q gi|254780349|r 367 --IRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 367 --iRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
||+--++.- .++|++.+-+-+.++.+.
T Consensus 384 ariRVqiSAaH----t~edid~~i~Af~~vgr~ 412 (417)
T KOG1359 384 ARIRVQISAAH----TEEDIDRLIEAFSEVGRF 412 (417)
T ss_pred EEEEEEEEHHC----CHHHHHHHHHHHHHHHHH
T ss_conf 47999970104----788899999999998875
No 200
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.23 E-value=2.3e-08 Score=78.79 Aligned_cols=303 Identities=17% Similarity=0.177 Sum_probs=193.2
Q ss_pred HHCCCCCCCCCC--CCHHHHHHHHCCCC----CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH
Q ss_conf 838881043010--29899998305102----886579888753360067999999999999987188630100001679
Q gi|254780349|r 33 NDEIQLIASENI--VSRAVLEAQGSILT----NKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQ 106 (433)
Q Consensus 33 ~~~l~LiASEN~--~S~~v~~~l~S~l~----nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~ 106 (433)
...|-|-+.||. +||.|+++....+. |||-+ . .+ +.| .+...+.+|.+--+|-..+|+.
T Consensus 18 ~~~I~L~~NEnp~gpp~~v~~ai~~~l~~~~~~rYPd----~------~~----~~L-r~~ia~~~gv~~~~v~~gnGs~ 82 (337)
T PRK03967 18 DYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPH----I------TA----DPL-REAIAEFLGLDAENIIVGNGSD 82 (337)
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCC----C------CH----HHH-HHHHHHHHCCCHHEEEECCCHH
T ss_conf 9817826989999999999999999987158776999----9------87----999-9999998683841099827889
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC-
Q ss_conf 9999999831548748812334484111476654333332201366583235659899999998604667897055243-
Q gi|254780349|r 107 MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS- 185 (433)
Q Consensus 107 An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~- 185 (433)
--+..+..+. +||+|+..+...+.+- ......|. +.+..+.+ ++..+|.+++.+.. .++|+|++.....|
T Consensus 83 e~i~~~~~~~-~gd~v~i~~P~f~~Y~---~~~~~~g~--~~~~vpl~-~~f~~d~~~~~~~~--~~~~~v~l~nPnNPT 153 (337)
T PRK03967 83 ELISYLVKLF-NGKYIVISPPTFGMYS---FYAKLNGI--PVIDVPLK-EDFTIDGDRIVEKA--KDASAVFICSPNNPT 153 (337)
T ss_pred HHHHHHHHHC-CCCEEEECCCCCHHHH---HHHHHCCC--EEEEEECC-CCCCCCHHHHHHCC--CCCCEEEEECCCCCC
T ss_conf 9999999863-9997998689830899---99998398--59996153-45678999998517--788789993899987
Q ss_pred -CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCC-CCC-EEEECCCCC--CCCCCCEEEEECCCCHHHHCCHH
Q ss_conf -5363799998864179789918620124432000123220-023-567404565--22567448983362056501664
Q gi|254780349|r 186 -RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVP-HCH-IVTTTTHKS--LRGPRGGLIMTNHADLAKKINSA 260 (433)
Q Consensus 186 -~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~-~AD-vvt~sTHKt--l~GPrgGiI~~~~~e~~~~i~~a 260 (433)
..++.+++.++++. +..+++|.|-+ -+ ++.-+.+-+. +-+ ||+-|.-|+ |+|=|=|.++++. ++.+++.+.
T Consensus 154 G~~~~~~el~~~~~~-~~~vvvDEaY~-ef-~~~s~~~l~~~~~nliv~rSfSK~~glaGlRlGy~ia~~-~~i~~l~k~ 229 (337)
T PRK03967 154 GNLQPIEEILKVLDT-GKPVVVDEAYV-EF-SGKSYIGLLDEYDNLILLRTFSKAFGLAGIRVGYAIANE-EIIKALYRI 229 (337)
T ss_pred CCCCCHHHHHHHHHC-CCEEEECCCHH-HH-CCCCHHHHHHHCCCCEEEECCCHHHCCCCCCCEEECCCH-HHHHHHHHH
T ss_conf 621678999986500-88788435547-64-575257788747762166556655345620023101899-999999995
Q ss_pred HCHHHHHHHHHHHHHHHHH-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHH
Q ss_conf 6543223445566689999-999973564899999999888999999861685233458889812631665567679999
Q gi|254780349|r 261 IFPGLQGGPFMHSIAAKAV-AFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAE 339 (433)
Q Consensus 261 vfPg~qg~~~~~~iaa~av-al~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~ 339 (433)
.-|.- .+.+|..+. +..+ -...+++..+.+.+.-+.|.+.|.+.+|+ ++..-+|+++ ++.
T Consensus 230 ~~p~~-----vn~~a~~aa~aal~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~p-----s~aNFvl~~~--------~~~ 290 (337)
T PRK03967 230 KPPFS-----LNILSEKIVRLMLD-HYDLIKERIDYIIKERERVYRELGDYAYP-----SDANFLLLKL--------DAY 290 (337)
T ss_pred CCCCC-----CCHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----CCCEEEEEEH--------HHH
T ss_conf 38987-----75999999999962-99999999999999999999981277789-----9881999725--------899
Q ss_pred HHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 988856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 340 SILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 340 ~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
+.|-+.||.+-.. + +..+.-+||.. -.++|++.+-+.+.+.++
T Consensus 291 ~~L~~~gIlVR~~--~-----~~~~~~iRIsv-------gt~een~~ll~aLke~~e 333 (337)
T PRK03967 291 DYLLENGIVVRKL--S-----GRLEGHIRVTI-------GKKEENDEFIKALKEFKE 333 (337)
T ss_pred HHHHHCCEEEECC--C-----CCCCCEEEEEC-------CCHHHHHHHHHHHHHHHH
T ss_conf 9998499099489--9-----99999899983-------999999999999999999
No 201
>PRK03262 consensus
Probab=99.22 E-value=8e-09 Score=81.96 Aligned_cols=321 Identities=18% Similarity=0.197 Sum_probs=192.9
Q ss_pred CCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 52036776469785899999999999999838881043010298999983051028865798887533600679999999
Q gi|254780349|r 4 ICKNRFFQQSLIESDPDVFSLIGQESCRQNDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENI 83 (433)
Q Consensus 4 ~~~~~~~~~~l~~~Dpei~~~i~~e~~rq~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~l 83 (433)
|.-+.+....+++..|=... +..-.+..|-|-+.||...|...... .--|||-+. +.. .|
T Consensus 3 ~~~~~l~r~~i~~l~pY~~~----~~~~~~~~ikL~sNEnP~~~~~~~~~--~~lnrYPD~----------~~~----~L 62 (355)
T PRK03262 3 MSITDLARENVRNLTPYQSA----RRLGGNGDVWLNANEYPTAVEFQLTQ--QTLNRYPEC----------QPK----AV 62 (355)
T ss_pred CCHHHHHCHHHCCCCCCCCC----CCCCCCCCEEEECCCCCCCCCHHHHH--HHHCCCCCC----------CHH----HH
T ss_conf 68898858652678998873----44799998895789999998487767--887039899----------889----99
Q ss_pred HHHHHHHHCCCCCEECCCHHHHHHHH-HHHHHHHCCC-CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999987188630100001679999-9999831548-748812334484111476654333332201366583235659
Q gi|254780349|r 84 AIERAKKLFNVNFVNVQSHSGSQMNQ-GVFLALMHPG-DSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLD 161 (433)
Q Consensus 84 a~~~a~~lF~a~~anvqp~SG~~An~-av~~ALl~pG-D~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID 161 (433)
++...+.+|.+.-+|-...|+.--+ .++.++++|| |.|+..+...+-+ .......|..+..+ +.+ ++..+|
T Consensus 63 -r~aiA~~~gv~~~~I~vGnGSdE~I~~i~~~f~~pg~d~vl~~~PtF~~Y---~~~a~~~g~~~~~v--p~~-~~~~~d 135 (355)
T PRK03262 63 -IENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMY---AVSAETIGVEIRTV--PTL-ENWQLD 135 (355)
T ss_pred -HHHHHHHHCCCHHHEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCHHHH---HHHHHHCCCEEEEE--ECC-CCCCCC
T ss_conf -99999986858557999378999999999998638997799778885999---99999739838996--465-566768
Q ss_pred HHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHHC--CCEEEECCCCHHHHHHHHCCCCCCC-CCC-EEEECCC
Q ss_conf 899999998604667897055243--536379999886417--9789918620124432000123220-023-5674045
Q gi|254780349|r 162 MHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADSI--GAYLMADISHISGLVVGGQHPSPVP-HCH-IVTTTTH 235 (433)
Q Consensus 162 ~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~~--ga~l~~D~aH~~GLIa~g~~~~Pl~-~AD-vvt~sTH 235 (433)
.+++.+.+ .++|+|++.....| ..++-+++.++++.. .+++++|.|-+ -+.-..-+.+-+. |-+ +|+-|.-
T Consensus 136 l~~~~~~~--~~~klv~l~nPNNPTG~~~~~~el~~l~~~~~~~~lvVvDEAY~-eF~~~~s~~~l~~~~~NliVlRTfS 212 (355)
T PRK03262 136 LQAIADNL--DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYI-EFCPQASLAGWLAEYPNLVILRTLS 212 (355)
T ss_pred HHHHHHHC--CCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHH-HHCCCCCHHHHHHCCCCEEEEECHH
T ss_conf 99999640--48888997689998764469999999997687672898730255-4365621556764077446761267
Q ss_pred C--CCCCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC-
Q ss_conf 6--5225674489833620565016646543223445566689999999973564899999999888999999861685-
Q gi|254780349|r 236 K--SLRGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGF- 312 (433)
Q Consensus 236 K--tl~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~- 312 (433)
| -|+|=|=|.++++. ++.+.+++..-|--.+++ ...+|+.| +........++..+++.+.-+.|.+.|.+.|+
T Consensus 213 K~~gLAGlRlGy~ia~~-~ii~~l~k~~~p~~vn~~-~~~~a~~a--l~~~~~~~~~~~i~~i~~~R~~l~~~L~~l~~~ 288 (355)
T PRK03262 213 KAFALAGLRCGFTLANE-EVINLLLKVIAPYPLSTP-VADIAAQA--LSPQGIEAMRERVAQINANRAWLIAALKEIACV 288 (355)
T ss_pred HHHCCCCCCEEEEECCH-HHHHHHHHHCCCCCCCHH-HHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 77246653505431799-999999984389987799-99999999--722659999999999999999999999848998
Q ss_pred -CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEEC-CCCCCCCCCCCCCCCCCCC
Q ss_conf -233458889812631665567679999988856718803-7899899998889851224
Q gi|254780349|r 313 -DIVSGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNK-NSIPFDPESPFITSGIRLG 370 (433)
Q Consensus 313 -~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nk-n~iP~D~~~~~~~sGiRlG 370 (433)
.|.. +++.-+|+++. ++.+..+.|.+.||++-. +..|+ .+..|||.
T Consensus 289 ~~v~p--S~aNFvl~~~~----~~~~~~~~L~~~gIlVR~~~~~~g------l~~~lRis 336 (355)
T PRK03262 289 EQVFD--SETNYILARFT----ASSAVFKSLWDQGIILRDQNKQPS------LSNCLRIT 336 (355)
T ss_pred CEECC--CCCCEEEEECC----CHHHHHHHHHHCCCEEEECCCCCC------CCCEEEEE
T ss_conf 60689--97828999789----999999999969938966888789------99989996
No 202
>PRK07908 hypothetical protein; Provisional
Probab=99.21 E-value=1.3e-08 Score=80.53 Aligned_cols=318 Identities=15% Similarity=0.130 Sum_probs=195.7
Q ss_pred HHHHCCCCCCCCCC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHH
Q ss_conf 99838881043010--2989999830510288657988875336006799999999999998718863010000167999
Q gi|254780349|r 31 RQNDEIQLIASENI--VSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMN 108 (433)
Q Consensus 31 rq~~~l~LiASEN~--~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An 108 (433)
....-|.|=..||. +|+.|++++...+.. ...||... .+-+- .+...+-+|.+--+|-+..|+.--
T Consensus 19 ~~pgiidlS~n~np~gpp~~v~~al~~a~~~--~~~YP~~~-----~~~~L-----r~aiA~~~gv~~d~I~~gnGs~E~ 86 (346)
T PRK07908 19 AAPGLLDFAVNVRADRPPEWLRERLAARLPD--LARYPSTE-----DVRRA-----RAAVAARHGRTRDEVLLLAGAAEG 86 (346)
T ss_pred CCCCCEECCCCCCCCCCCHHHHHHHHHHCCC--CCCCCCCC-----CHHHH-----HHHHHHHHCCCHHHEEEECCHHHH
T ss_conf 8999778889999989799999999975554--66893986-----56999-----999999978588999874379999
Q ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--C
Q ss_conf 99999831548748812334484111476654333332201366583235659899999998604667897055243--5
Q gi|254780349|r 109 QGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--R 186 (433)
Q Consensus 109 ~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~ 186 (433)
+..+ +.+.|+|.++. ....+.+ .......|. .+..+.++++ ..+|.+++. .++|+|++.....| .
T Consensus 87 i~~l-~~~~~~~~vi~-~P~f~~y---~~~~~~~g~--~v~~v~l~~~-~~ld~~ai~-----~~~~lv~l~nPnNPTG~ 153 (346)
T PRK07908 87 FALL-ARLLPRRAAVV-HPSFTEP---EAALRAAGI--PVHRVVLDPP-FRLDPAAVP-----DDADLVVVGNPTNPTSV 153 (346)
T ss_pred HHHH-HHHCCCCEEEE-CCCCHHH---HHHHHHCCC--CEEEEECCCC-CCCCHHHCC-----CCCCEEEECCCCCCCCC
T ss_conf 9999-99748996997-8885799---999998699--2599507986-668965767-----67898997999798778
Q ss_pred CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CC-EEEECCCCC--CCCCCCEEEEECCCCHHHHCCHHH
Q ss_conf 3637999988641797899186201244320001232200--23-567404565--225674489833620565016646
Q gi|254780349|r 187 VWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CH-IVTTTTHKS--LRGPRGGLIMTNHADLAKKINSAI 261 (433)
Q Consensus 187 ~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--AD-vvt~sTHKt--l~GPrgGiI~~~~~e~~~~i~~av 261 (433)
.++-+++.++++ .+.++++|.| +.-++- +..++.... -+ ||.-|.-|+ |+|=|-|.++.+. ++.+++++.-
T Consensus 154 ~~~~e~l~~l~~-~~~~lVvDEa-Y~df~~-~~~~s~~~~~~~nvivlrSfSK~yglaGlRiGy~va~~-~~i~~l~~~~ 229 (346)
T PRK07908 154 LHPAEQLLALRR-PGRILVVDEA-FADAVP-GEPESLAGDALPDLLVLRSLTKTWSLAGLRVGYALGAP-ELLARLTAQR 229 (346)
T ss_pred CCCHHHHHHHHC-CCCEEEEEHH-HHHCCC-CCCHHHHHHCCCCEEEEECHHHHHCCCHHHHEEEECCH-HHHHHHHHHC
T ss_conf 678999999853-4989999511-543258-97134444248988999243576257725513211699-9999999827
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHH
Q ss_conf 54322344556668999999997356489999999988899999986168523345888981263166556767999998
Q gi|254780349|r 262 FPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAESI 341 (433)
Q Consensus 262 fPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~ 341 (433)
-|.-.+.+ .+++.+.++......+.....+++.+.-..|.+.|.+.|+.++. -+++.-+|+.+. ++..+.+.
T Consensus 230 ~~~~v~~~---a~~a~~a~~~~~~~~~~~~~~~~~~~~R~~l~~~L~~~g~~~~~-ps~anF~l~~~~----~a~~~~~~ 301 (346)
T PRK07908 230 AHWPLGTL---QLEAIAACCAPRAVAEAAADAERLAALRAEMVAGLRAVGAEVVD-PGAAPFVLVRVP----DAELVRKR 301 (346)
T ss_pred CCCCCCHH---HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC-CCCEEEEEEECC----CHHHHHHH
T ss_conf 78888799---99999999587568999999999999999999999977886538-995089998689----99999999
Q ss_pred HHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 342 LGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 342 Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
|.+.||.|-. +..-++..+.-+||.. -.++|++.+-+-+.++|+
T Consensus 302 L~~~gIlVr~----~~~f~gl~~~~iRiav-------~~~een~rli~aL~~il~ 345 (346)
T PRK07908 302 LRERGIAVRR----GDTFPGLDPDYLRAAV-------RPEWPVDRLVQAIAEILR 345 (346)
T ss_pred HHCCCEEEEE----CCCCCCCCCCEEEEEE-------CCHHHHHHHHHHHHHHHC
T ss_conf 9808959997----8877887989899983-------889999999999999974
No 203
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.21 E-value=2.7e-08 Score=78.31 Aligned_cols=305 Identities=18% Similarity=0.175 Sum_probs=180.4
Q ss_pred HHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHH-HH
Q ss_conf 83888104301029899998305102886579888753360067999999999999987188630100001679999-99
Q gi|254780349|r 33 NDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQ-GV 111 (433)
Q Consensus 33 ~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~-av 111 (433)
...+-|-+.||...+...... +. -|||-+. +..+- .+...+.+|.+.-+|-...|+.-.+ .+
T Consensus 24 ~~~ikL~sNEnP~~~~~~~~~-~~-lnRYPD~----------~~~~L-----~~~lA~~~~v~~~~Ii~gnGSde~I~~i 86 (346)
T PRK04635 24 SGDVWLNANESPFDNEYKTNF-AR-LNRYSEC----------QPKEL-----IQAYAAYAGVKPEQVLTSRGADEGIELL 86 (346)
T ss_pred CCCEEEECCCCCCCCCHHHHH-HH-HCCCCCC----------CHHHH-----HHHHHHHHCCCHHHEEECCCHHHHHHHH
T ss_conf 894893799999998565659-98-3679998----------88999-----9999999686966899848899999999
Q ss_pred HHHHHCCC-CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCC
Q ss_conf 99831548-748812334484111476654333332201366583235659899999998604667897055243--536
Q gi|254780349|r 112 FLALMHPG-DSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVW 188 (433)
Q Consensus 112 ~~ALl~pG-D~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~ 188 (433)
+.++++|| |+|+..+...+-+- ......|. +.+.++.++ +..+|.+.+++.. .++|+|++.....| ..+
T Consensus 87 ~~af~~pg~d~vl~~~PtF~~Y~---~~a~~~g~--~~~~vpl~~-d~~~dl~~l~~~~--~~~kli~l~NPNNPTG~~~ 158 (346)
T PRK04635 87 IRAFCEPNQDAILYCPPTYGMYA---ISAETIGV--ERKTVPLTS-DWQLDLPSIEANL--DNVKLVFVCSPNNPTGNLV 158 (346)
T ss_pred HHHHHCCCCCEEEECCCCHHHHH---HHHHHCCC--EEEEEECCC-CCCCCHHHHHHHC--CCCCEEEECCCCCCCCCCC
T ss_conf 99984699976997787569999---99974796--799973685-6577999998643--4875899778999876448
Q ss_pred CHHHHHHHHHHCC--CEEEECCCCHHHHHHHHCCCCCCC-CCCE-EEECCCC--CCCCCCCEEEEECCCCHHHHCCHHHC
Q ss_conf 3799998864179--789918620124432000123220-0235-6740456--52256744898336205650166465
Q gi|254780349|r 189 DWERFRSIADSIG--AYLMADISHISGLVVGGQHPSPVP-HCHI-VTTTTHK--SLRGPRGGLIMTNHADLAKKINSAIF 262 (433)
Q Consensus 189 d~~~l~eIa~~~g--a~l~~D~aH~~GLIa~g~~~~Pl~-~ADv-vt~sTHK--tl~GPrgGiI~~~~~e~~~~i~~avf 262 (433)
+.+++.++++... +++++|.|= .-+.-..-.-+-+. +-++ |+-|.-| .|+|-|=|.++++. ++.+.+++..-
T Consensus 159 ~~~~l~~l~~~~~~~~lvVvDEAY-~ef~~~~s~~~l~~~~~NliVlRTfSK~~gLaGlRlGY~ia~~-~~i~~l~k~~~ 236 (346)
T PRK04635 159 KRKDIISLLEMTKDRAIVVMDEAY-IDFCPEASTVDLLAQYPNLAILRTLSKAFALAGLRCGFTLANE-ELINVLLKVIA 236 (346)
T ss_pred CHHHHHHHHHHCCCCCEEEEECCE-ECCCCCCCHHHHHHHCCCEEEEECHHHHHCCCCCCCEEECCCH-HHHHHHHHHHC
T ss_conf 999999999848756559987453-1036564467898608816875056787406541114100799-99999998408
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCHHHHH--H-HHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCEEEECCCCCCCCHHHH
Q ss_conf 43223445566689999999973564899--9-999998889999998616-8523345888981263166556767999
Q gi|254780349|r 263 PGLQGGPFMHSIAAKAVAFGEALSSEFRD--Y-AKQIVLNSQALAKKLQFL-GFDIVSGGTDNHLMLVDLRSKRMTGKRA 338 (433)
Q Consensus 263 Pg~qg~~~~~~iaa~aval~Ea~~~~f~~--Y-a~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~vlvdl~~~~~~G~~a 338 (433)
|.-.+. ....+|.. ++.+ .++.. + ...+.++-+.|...|... |+++.. +.+.-+|+++. ++.+.
T Consensus 237 p~~v~~-~a~~~a~~--al~~---~~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~--s~aNFil~~~~----~~~~~ 304 (346)
T PRK04635 237 PYPVPV-PVAEIATQ--ALSE---AGLARAKFQVLDLSANRAYLQAGLSMLPGVTVFE--GWGNYLLVKFP----DGDAL 304 (346)
T ss_pred CCCCCH-HHHHHHHH--HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC--CCCCEEEEECC----CHHHH
T ss_conf 988889-99999999--9730---7899999999999999999999998679907789--98808999889----99999
Q ss_pred HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 998885671880378998999988898512246667307999899999999999
Q gi|254780349|r 339 ESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIA 392 (433)
Q Consensus 339 ~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~ 392 (433)
.+.|.+.||++-... .++.||+.. -..+|++.+-+.|.
T Consensus 305 ~~~l~~~GI~VR~~~---------~~~~iRISv-------Gt~eEn~~~l~~lr 342 (346)
T PRK04635 305 FKAAWDHGIILRNSP---------IENCVRISV-------GNREECEKTLGFIR 342 (346)
T ss_pred HHHHHHCCEEECCCC---------CCCEEEEEC-------CCHHHHHHHHHHHH
T ss_conf 999983995985699---------999799953-------99999999999999
No 204
>KOG1368 consensus
Probab=99.18 E-value=4.3e-09 Score=83.84 Aligned_cols=284 Identities=21% Similarity=0.250 Sum_probs=190.1
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHC-CCCEEEECCCCCCCCCCCCCCCC
Q ss_conf 57988875336006799999999999998718863010000167999999998315-48748812334484111476654
Q gi|254780349|r 62 AEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMH-PGDSFMGLSLDSGGHLTHGSSVN 140 (433)
Q Consensus 62 aeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~-pGD~Il~~~l~~GGHlshg~~~~ 140 (433)
+|--.|.-.||--.-.-++| ++..++||-+-+-. ..||++.|+.+.+.-+. ||..|+.=+..|==-.-.|....
T Consensus 43 ~eA~vgDdVyGeD~tt~rLE----~~vA~l~GKEAgLF-v~SGTmgNllaIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~ 117 (384)
T KOG1368 43 AEASVGDDVYGEDPTTNRLE----QRVAELFGKEAGLF-VPSGTMGNLLAIMVHCHQRGSEIIVGDRAHIHRYEQGGISQ 117 (384)
T ss_pred HHCCCCCCCCCCCCCHHHHH----HHHHHHHCCCCEEE-ECCCCCCCHHHHHHHHCCCCCEEEECCCHHEEEHHCCCHHH
T ss_conf 64534752136785188999----99999847541256-32665310788878744888557843610321212167211
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC-----C--CEEEEE-------CCCCCCCCCHHHHHHHHHHCCCEEEE
Q ss_conf 333332201366583235659899999998604-----6--678970-------55243536379999886417978991
Q gi|254780349|r 141 MSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYN-----P--KLIIVG-------GTAYSRVWDWERFRSIADSIGAYLMA 206 (433)
Q Consensus 141 ~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~k-----P--klIi~G-------~S~y~~~~d~~~l~eIa~~~ga~l~~ 206 (433)
++|.....+ .+++++.+|.++++.-++..+ | +||.+. +-++|-. -+.++.++|++.|-.|+.
T Consensus 118 l~gv~~~tv---~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle-~~~~v~~lak~~glkLH~ 193 (384)
T KOG1368 118 LAGVHVRTV---KNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLE-ELDRVKALAKRHGLKLHM 193 (384)
T ss_pred HCCCEEEEE---EECCCCEEEHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEHH-HHHHHHHHHHCCCCEEEC
T ss_conf 046146754---3179975569999876218999735897317986213135686674199-999999999615971533
Q ss_pred CCCCHHH-HHHHHCCCCCCCC----CCEEEECCCCCCCCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHH
Q ss_conf 8620124-4320001232200----2356740456522567448983362056501664654322344556668999999
Q gi|254780349|r 207 DISHISG-LVVGGQHPSPVPH----CHIVTTTTHKSLRGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAF 281 (433)
Q Consensus 207 D~aH~~G-LIa~g~~~~Pl~~----ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval 281 (433)
|.|-+-- -+|.|+ |++. +|-|.-..-|.|..|-|.+|..++ ++.+|- --|-..+||- |-++--+|.+-
T Consensus 194 DGARi~NAavasgV---~vk~i~~~fDSVsiCLSKglgAPVGSViVG~k-~FI~kA--~~~RKalGGG-mRQsGvLaaaa 266 (384)
T KOG1368 194 DGARIFNAAVASGV---PVKKICSAFDSVSICLSKGLGAPVGSVIVGSK-DFIDKA--RHFRKALGGG-MRQSGVLAAAA 266 (384)
T ss_pred CHHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHCCCCCCCCCEEECCH-HHHHHH--HHHHHHHCCC-HHHHHHHHHHH
T ss_conf 62666557877199---89999876324243553557887401787528-899998--9999975686-13777999988
Q ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCC
Q ss_conf 997356489999999988899999986168-5233458889812631665567679999988856718803789989999
Q gi|254780349|r 282 GEALSSEFRDYAKQIVLNSQALAKKLQFLG-FDIVSGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPES 360 (433)
Q Consensus 282 ~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G-~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~ 360 (433)
.-++++.+. --++.-+-|+.||+.+...+ +++-.--+++.++.+.+...+++..+.-+.|++.||.+= +++.+
T Consensus 267 Lval~~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~~~~~~l~~~~~k~gi~lm----~~~s~- 340 (384)
T KOG1368 267 LVALDENVP-LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQARLTAEELCKFLEKNGILLM----GGASR- 340 (384)
T ss_pred HHHHHCCHH-HHHHHHHHHHHHHHHHCCCCCEEEECCHHHCCEEEEECCCCCCCHHHHHHHHHHCCEEEE----ECCCC-
T ss_conf 987631227-778779999999998646666346322131233211102566789999988987785886----14666-
Q ss_pred CCCCCCCCCCCH
Q ss_conf 888985122466
Q gi|254780349|r 361 PFITSGIRLGTP 372 (433)
Q Consensus 361 ~~~~sGiRlGT~ 372 (433)
-|||--.
T Consensus 341 -----r~Rivlh 347 (384)
T KOG1368 341 -----RIRIVLH 347 (384)
T ss_pred -----CEEEEEE
T ss_conf -----2489999
No 205
>TIGR01326 OAH_OAS_sulfhy O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase; InterPro: IPR006235 This family of sequences is a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine sulfhydrylase (OAH, 2.5.1.49 from EC) and O-acetylserine sulfhydrylase (OAS, 2.5.1.47 from EC). An alternate name for OAH sulfhydrylase is homocysteine synthase.; GO: 0016765 transferase activity transferring alkyl or aryl (other than methyl) groups, 0006520 amino acid metabolic process.
Probab=99.17 E-value=1.2e-10 Score=94.73 Aligned_cols=211 Identities=23% Similarity=0.226 Sum_probs=139.7
Q ss_pred HHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 99998718863010000167999999998315487488123344841114766543333322013665832356598999
Q gi|254780349|r 86 ERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEI 165 (433)
Q Consensus 86 ~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~ 165 (433)
+|.-.|=|--.| +=.=||+.|-+.+++.|.+-||.|.+-+-=.||=.+- -.+++--.+-++.+ ||.++ |.|++
T Consensus 64 ~RiAALEGGvaa-l~~ASG~AA~~~Ailnla~AGDnIVsS~~LYGGTynL-F~~TlkrlGIevrF--vd~dd---~pe~~ 136 (434)
T TIGR01326 64 QRIAALEGGVAA-LAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNL-FKHTLKRLGIEVRF--VDGDD---DPEEL 136 (434)
T ss_pred HHHHHHCCCEEE-HHHCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHH-HHHHHHHCCEEEEE--ECCCC---CHHHH
T ss_conf 888642155000-2101157999999999972698269806444225789-99955544814887--27888---87899
Q ss_pred HHHHHHHCCCEEEEECCCCCC--CCCHHHHHHHHHHC--CCEEEECCCCHHHHHHHH-CCCCCCCC-CCEEEECCCCCCC
Q ss_conf 999986046678970552435--36379999886417--978991862012443200-01232200-2356740456522
Q gi|254780349|r 166 ESLAIEYNPKLIIVGGTAYSR--VWDWERFRSIADSI--GAYLMADISHISGLVVGG-QHPSPVPH-CHIVTTTTHKSLR 239 (433)
Q Consensus 166 ~~~a~~~kPklIi~G~S~y~~--~~d~~~l~eIa~~~--ga~l~~D~aH~~GLIa~g-~~~~Pl~~-ADvvt~sTHKtl~ 239 (433)
++.++ .+.|.|++..=..|. ..|+++++|||++. |.-|++|.. ||++ .+=.||+| ||||+-|+-|-+.
T Consensus 137 ~k~id-~nTKAvf~EtIgNP~~~v~Die~~a~~Ah~~PhgvPliVDNT-----~atpGYL~rPi~hGADIVvhSaTK~iG 210 (434)
T TIGR01326 137 EKAID-ENTKAVFAETIGNPALNVPDIEAVAEVAHAHPHGVPLIVDNT-----FATPGYLCRPIDHGADIVVHSATKYIG 210 (434)
T ss_pred HHHCC-CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECC-----CCCCCCCCCHHHCCCCEEEEEECCCCC
T ss_conf 97606-675189840123877676785899999986789834887478-----687641006456498679961001012
Q ss_pred CCC---CEEEEEC-CC-CHHHHCCHHHCHHH-------HHHHHHHHHH--------HHHHHHH----------HHHCH--
Q ss_conf 567---4489833-62-05650166465432-------2344556668--------9999999----------97356--
Q gi|254780349|r 240 GPR---GGLIMTN-HA-DLAKKINSAIFPGL-------QGGPFMHSIA--------AKAVAFG----------EALSS-- 287 (433)
Q Consensus 240 GPr---gGiI~~~-~~-e~~~~i~~avfPg~-------qg~~~~~~ia--------a~aval~----------Ea~~~-- 287 (433)
|-= ||+|.=. += +|.+. +.=||.+ .|=--....- ..|-.++ =+++|
T Consensus 211 GHG~aiGG~ivD~G~FndW~~~--~gkFP~f~~PdpsYHGl~f~E~~g~~~~~G~~~~Afi~~~Rv~~LRD~Gaa~sPFn 288 (434)
T TIGR01326 211 GHGTAIGGVIVDGGKFNDWANN--PGKFPLFTTPDPSYHGLVFTETFGEFEGLGLGNIAFIVKARVQLLRDLGAALSPFN 288 (434)
T ss_pred CCEEEEEEEEEECCCCCCCCCC--CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHEEEEEEEEECHHCCCCCCHHH
T ss_conf 6314650478826755630147--87477788888865871265315575777850000034446742210033401789
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf ---------489999999988899999986168
Q gi|254780349|r 288 ---------EFRDYAKQIVLNSQALAKKLQFLG 311 (433)
Q Consensus 288 ---------~f~~Ya~qvv~NA~~La~~L~~~G 311 (433)
--.--++|=++||.++|+-|+++-
T Consensus 289 AFLllQGLETLsLR~ERH~~NA~kVA~fL~~Hp 321 (434)
T TIGR01326 289 AFLLLQGLETLSLRMERHVENALKVAEFLEAHP 321 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999998666787678888899999999972788
No 206
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.17 E-value=2e-08 Score=79.19 Aligned_cols=284 Identities=18% Similarity=0.193 Sum_probs=157.5
Q ss_pred HHHCCCCCEECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHH
Q ss_conf 987188630100001679-9999999831548748812334484111476654333332201366583235-65989999
Q gi|254780349|r 89 KKLFNVNFVNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDG-LLDMHEIE 166 (433)
Q Consensus 89 ~~lF~a~~anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~-~ID~d~~~ 166 (433)
+.+-+..--+|-.-.|.. +-..++.||+.|||.||.+.... -+.... +...+-..++|..|++++ ..|.|+++
T Consensus 201 ~~~~~~~~~di~~gnGvSE~i~~am~Alln~GDeVLiP~P~Y---Plyta~--v~L~Gg~pV~y~~dEe~~w~PDiedLe 275 (518)
T PRK13355 201 KNIPNVDIDDIYTGNGVSELINLSMSALLDDGDEVLVPSPDY---PLWTAC--VNLAGGTAVHYRCDEESEWYPDIDDIR 275 (518)
T ss_pred CCCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCC---CCHHHH--HHHCCCEEEEEEECCCCCCCCCHHHHH
T ss_conf 699998740356547767999999998368999898259999---778999--886098788987452217788999998
Q ss_pred HHHHHHCCCEEEEECC------CCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHH-CCCCCCCCC-C--EEE-ECCC
Q ss_conf 9998604667897055------243536379999886417978991862012443200-012322002-3--567-4045
Q gi|254780349|r 167 SLAIEYNPKLIIVGGT------AYSRVWDWERFRSIADSIGAYLMADISHISGLVVGG-QHPSPVPHC-H--IVT-TTTH 235 (433)
Q Consensus 167 ~~a~~~kPklIi~G~S------~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g-~~~~Pl~~A-D--vvt-~sTH 235 (433)
+.+. -|.|+|++-.. +|+ .-.++++.++|++++.+++.|.- +..|+-.| .|.+-...+ | ++| .+.-
T Consensus 276 ~kIT-~kTKAIVInNPNNPTGAVyS-~E~LeeIaeiArehdLiIISDEI-Y~~LvYDg~~h~Siasla~d~~~It~NG~S 352 (518)
T PRK13355 276 SKIT-SKTKAIVIINPNNPTGALYP-KEVLQQIVDIAREHQLIIFSDEI-YDRLVMDGLEHTSIASLAPDLFCVTFSGLS 352 (518)
T ss_pred HHCC-CCCEEEEEECCCCCCCCCCC-HHHHHHHHHHHHHCCEEEEECCC-HHHCCCCCCCCCCHHHCCCCCEEEEECCCC
T ss_conf 5357-15579999689898887889-99999999999985969996230-221006898630476708864599988776
Q ss_pred CCCC--CCCCEE-EEECCCCHHHHCCHHHC----HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH---HHHHHHHHHHHH
Q ss_conf 6522--567448-98336205650166465----4322344556668999999997356489999---999988899999
Q gi|254780349|r 236 KSLR--GPRGGL-IMTNHADLAKKINSAIF----PGLQGGPFMHSIAAKAVAFGEALSSEFRDYA---KQIVLNSQALAK 305 (433)
Q Consensus 236 Ktl~--GPrgGi-I~~~~~e~~~~i~~avf----Pg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya---~qvv~NA~~La~ 305 (433)
|++. |=|.|- +++.+.++.+.+-+++- -.+.++ -+.+.|+. .++.. ....++|. .+.-+..+.+-+
T Consensus 353 KsyaMtGWRiGwmv~sG~~~~a~~~Ie~l~~Las~~lcsn-vpaQ~A~~-aAL~g--~qs~~d~~~~~~rl~erRdlv~e 428 (518)
T PRK13355 353 KSHMIAGFRAGWMMLSGNKRHAKDYIEGLNMLANMRMCSN-VPAQSVVQ-TALGG--HQSVKDYTVPGGRLYDQRELVYD 428 (518)
T ss_pred CCEECCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC-HHHHHHHH-HHHCC--CCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 6633220113665424858999999999999860456636-89999999-98628--76489999999999999999999
Q ss_pred HHHHC-CCCCCC-CCCCCCEEE--ECCCCCCC-C-HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCC
Q ss_conf 98616-852334-588898126--31665567-6-799999888567188037899899998889851224666730799
Q gi|254780349|r 306 KLQFL-GFDIVS-GGTDNHLML--VDLRSKRM-T-GKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGF 379 (433)
Q Consensus 306 ~L~~~-G~~vv~-ggTd~H~vl--vdl~~~~~-~-G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~ 379 (433)
.|.+- |+..+. .|+ =-++ +|...+++ + -.-+.+.|++.+|.+ |||.-=....|.=+||... +..-.
T Consensus 429 ~Ln~IpGvscvkP~GA--FYlFPkID~~~~~i~dDeeFal~LL~Ee~VlV----VPGsaFG~~~pghfRIsya--ps~e~ 500 (518)
T PRK13355 429 MLNAIPGISAVKPKAA--FYIFPKIDVKIFNIHSDEQFALDLLHEKHILI----SHGGAFNWDKPDHFRVVYL--PRLGM 500 (518)
T ss_pred HHHCCCCCEECCCCEE--EEEEEECCCCCCCCCCHHHHHHHHHHHCCEEE----ECCCCCCCCCCCEEEEEEC--CCHHH
T ss_conf 9835999765899815--89955415344899899999999998589999----5875448999897999927--99999
Q ss_pred CHHHHHHHHHHHH
Q ss_conf 9899999999999
Q gi|254780349|r 380 KEKDFEYIGELIA 392 (433)
Q Consensus 380 ~e~em~~iA~li~ 392 (433)
-++-|+.|++|+.
T Consensus 501 L~EA~~RI~~FL~ 513 (518)
T PRK13355 501 LEETMDELDDFFS 513 (518)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999999
No 207
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.13 E-value=1.1e-09 Score=88.03 Aligned_cols=215 Identities=23% Similarity=0.215 Sum_probs=140.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 79999999999999871886301000016799999999831548748812334484111476654333332201366583
Q gi|254780349|r 76 YVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRK 155 (433)
Q Consensus 76 ~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~ 155 (433)
-.|.+| +|...|=|--.+ +-.-||+.|-+.++..|+++||.|.+-+-=.||-.+-= ..++...+.++.+ +|.
T Consensus 63 T~~vlE----~RiAaLEGG~aa-~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf-~~tl~~~Gi~v~f--vd~ 134 (426)
T COG2873 63 TTDVLE----ERIAALEGGVAA-LAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLF-SHTLKRLGIEVRF--VDP 134 (426)
T ss_pred HHHHHH----HHHHHHHCCHHH-HHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH-HHHHHHCCCEEEE--ECC
T ss_conf 089999----999986145411-33313358999999986458870675132337548899-9888864817999--279
Q ss_pred CCCCCCHHHHHHHHHHHCCCEEEEECCCCCC--CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEE
Q ss_conf 2356598999999986046678970552435--3637999988641797899186201244320001232200-235674
Q gi|254780349|r 156 EDGLLDMHEIESLAIEYNPKLIIVGGTAYSR--VWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTT 232 (433)
Q Consensus 156 ~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~--~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~ 232 (433)
.|.+.+++. ...+.|.|++..-..|. ..|++++.+||++.|..|++|.. +++..+-.|++| ||||..
T Consensus 135 ----~d~~~~~~a-I~~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT-----~atpyl~rP~~hGADIVvH 204 (426)
T COG2873 135 ----DDPENFEAA-IDENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNT-----FATPYLCRPIEHGADIVVH 204 (426)
T ss_pred ----CCHHHHHHH-HCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECC-----CCCCEECCHHHCCCCEEEE
T ss_conf ----998999987-382240687875168876635779999999875993898367-----7730043665618877998
Q ss_pred CCCCCCCCCC---CEEEEEC-CCCHHHHCCHHHCHHHHHH-HH-----HH--------HHHHHHHHHH---HHHCH----
Q ss_conf 0456522567---4489833-6205650166465432234-45-----56--------6689999999---97356----
Q gi|254780349|r 233 TTHKSLRGPR---GGLIMTN-HADLAKKINSAIFPGLQGG-PF-----MH--------SIAAKAVAFG---EALSS---- 287 (433)
Q Consensus 233 sTHKtl~GPr---gGiI~~~-~~e~~~~i~~avfPg~qg~-~~-----~~--------~iaa~aval~---Ea~~~---- 287 (433)
|+.|-+.|-- ||+|.-. +-+|.+ +..||.++.- |- .+ .+.+....|+ -++.|
T Consensus 205 S~TK~igGhGt~iGG~iVD~G~FDw~~---~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAf 281 (426)
T COG2873 205 SATKYIGGHGTAIGGVIVDGGKFDWTA---NGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAF 281 (426)
T ss_pred EECCCCCCCCCCCCEEEEECCCCCCCC---CCCCCCCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHH
T ss_conf 603012677654240798677545545---77786667898442554325422407899999998887516556937889
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf -------489999999988899999986168
Q gi|254780349|r 288 -------EFRDYAKQIVLNSQALAKKLQFLG 311 (433)
Q Consensus 288 -------~f~~Ya~qvv~NA~~La~~L~~~G 311 (433)
--.--+++-++||.++|+-|...-
T Consensus 282 l~lqGlETL~LRmerH~~NA~~vA~~L~~Hp 312 (426)
T COG2873 282 LLLQGLETLSLRMERHCENALKVAEFLENHP 312 (426)
T ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9983433667789998776999999986099
No 208
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.13 E-value=6.7e-08 Score=75.51 Aligned_cols=303 Identities=16% Similarity=0.172 Sum_probs=170.8
Q ss_pred HHHHHHH-HHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC---EEC
Q ss_conf 9999999-83888104301--02989999830510288657988875336006799999999999998718863---010
Q gi|254780349|r 26 GQESCRQ-NDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNF---VNV 99 (433)
Q Consensus 26 ~~e~~rq-~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~---anv 99 (433)
.++..++ .+.|+|--.|. -+++.+++++.-. .+. .| |+-..-..++-+-..+..++-||... -+|
T Consensus 19 ~~~~~~~~~~vI~l~iG~Pd~p~P~~v~~a~~~a-~~~--~~------Y~~~~G~~~LReAIa~~~~~~~g~~~~~~~~V 89 (364)
T PRK07865 19 KARAAAHPDGIVDLSVGTPVDPVPPVIQEALAAA-ADA--PG------YPTTAGTPELREAIVAWLARRYGVTGLDPAAV 89 (364)
T ss_pred HHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHH-CCC--CC------CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 9999878998398569899899899999999962-489--99------89988879999999999999839898996879
Q ss_pred CCHHHHHHHHH-HHHHH-HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEE
Q ss_conf 00016799999-99983-15487488123344841114766543333322013665832356598999999986046678
Q gi|254780349|r 100 QSHSGSQMNQG-VFLAL-MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLI 177 (433)
Q Consensus 100 qp~SG~~An~a-v~~AL-l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklI 177 (433)
-..+|+..-+. ....| ++|||.|+..+...-.+ .......| .+. +..|.+++ +...++++|
T Consensus 90 ~vt~Ga~~~l~~l~~~l~~~pGD~Vlip~P~Yp~y---~~~~~~~g--~~~-----------v~~d~~~~-~~~~~~~li 152 (364)
T PRK07865 90 LPVIGSKELVAWLPTLLGLGPGDVVVVPELAYPTY---EVGARLAG--ATV-----------VRADSLTE-LGPQTPALI 152 (364)
T ss_pred EECCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHH---HHHHHHCC--CEE-----------EECCCHHH-CCCCCCEEE
T ss_conf 97698899999999997079999899866786019---99999819--865-----------61078877-598775299
Q ss_pred EEECCCCC--CCC---CHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCC-C------CC-EEEECCCCCC--CCCC
Q ss_conf 97055243--536---3799998864179789918620124432000123220-0------23-5674045652--2567
Q gi|254780349|r 178 IVGGTAYS--RVW---DWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVP-H------CH-IVTTTTHKSL--RGPR 242 (433)
Q Consensus 178 i~G~S~y~--~~~---d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~-~------AD-vvt~sTHKtl--~GPr 242 (433)
++.....| ..+ .++++.++|.+.|.+++.|..+- .|+-.+..++.+. . -. |+..|.-|++ +|=|
T Consensus 153 ~lnsP~NPTG~v~s~e~l~~l~~la~~~~i~vi~DE~Y~-~l~~~~~~~s~l~p~~~~~~~~~vi~i~S~SK~~~~~GlR 231 (364)
T PRK07865 153 WLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYL-GLGWDAEPVSVLDPRVCGGDHTGLLAVHSLSKQSNLAGYR 231 (364)
T ss_pred EECCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCHH-HHCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCE
T ss_conf 989996985511769999999999776718998254257-6425898865138644277757579994365230677744
Q ss_pred CEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCC
Q ss_conf 44898336205650166465432234455666899999999735648999999998889999998616852334-58889
Q gi|254780349|r 243 GGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVS-GGTDN 321 (433)
Q Consensus 243 gGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~-ggTd~ 321 (433)
-|.+..+. ++.+++...---.....+..-+.|+ +.++.+ ...........-++-..|.+.|.+.|+.+.. .|+
T Consensus 232 iG~i~~~~-~li~~l~~~~~~~~~~~~~~~Q~a~-~aal~~--~~~~~~~~~~y~~rr~~l~~~L~~~g~~~~~p~G~-- 305 (364)
T PRK07865 232 AGFVAGDP-ALVAELLAVRKHAGMMVPAPVQAAM-VAALGD--DAHVREQRERYARRRAVLLPALEAAGFTVDHSEAG-- 305 (364)
T ss_pred EEEEECCH-HHHHHHHHHHHHCCCCCCHHHHHHH-HHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCE--
T ss_conf 89996799-9999999999855023789999999-999579--39999999999999999999998679766269922--
Q ss_pred CEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCC---CCCCC
Q ss_conf 812631665567679999988856718803789989999888985---12246
Q gi|254780349|r 322 HLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSG---IRLGT 371 (433)
Q Consensus 322 H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sG---iRlGT 371 (433)
-.+|++. +.+..+..+.|.+.||.+. ||. .|-+.| +||.-
T Consensus 306 fylw~~~---~~~~~~~~~~l~e~gV~v~----PG~---~Fg~~g~~~vRls~ 348 (364)
T PRK07865 306 LYLWATR---GEDCWDTVAWLAERGILVA----PGD---FYGPAGAQHVRVAL 348 (364)
T ss_pred EEEEEEC---CCCHHHHHHHHHHCCEEEE----CCC---CCCCCCCCEEEEEE
T ss_conf 7998888---9999999999997998991----887---43689998699996
No 209
>pfam06838 Alum_res Aluminium resistance protein. This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria.
Probab=99.12 E-value=1.1e-08 Score=81.13 Aligned_cols=249 Identities=17% Similarity=0.303 Sum_probs=153.8
Q ss_pred HHHHCCCCCEECCC--HHHHHHHHHHHHHHHCCCCEEEECCCCC-------CCCCCCCCCCCCC--CCCCCCCCCCCCCC
Q ss_conf 99871886301000--0167999999998315487488123344-------8411147665433--33322013665832
Q gi|254780349|r 88 AKKLFNVNFVNVQS--HSGSQMNQGVFLALMHPGDSFMGLSLDS-------GGHLTHGSSVNMS--GKWFKAIPYNVRKE 156 (433)
Q Consensus 88 a~~lF~a~~anvqp--~SG~~An~av~~ALl~pGD~Il~~~l~~-------GGHlshg~~~~~~--g~~~~~~~y~~d~~ 156 (433)
-.+.|+++-|-||| .||+.|-..++.++++|||+++++.=.- =|. .-....++. |..|+-++. . +
T Consensus 64 yA~vfgaE~ALVR~q~vSGTHAi~~aLfg~LrPGD~ll~itG~PYDTL~eVIGi-~g~~~GSL~e~Gv~Y~~v~L--~-~ 139 (405)
T pfam06838 64 YARVFGAEAALVRPQFVSGTHAIATALFGVLRPGDELLYITGKPYDTLEEVIGI-RGEGQGSLKDFGIGYREVPL--L-E 139 (405)
T ss_pred HHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHCC-CCCCCCCHHHHCCCCEEECC--C-C
T ss_conf 999967377650343255289999999836789987874489973658987185-88998888995966036435--7-7
Q ss_pred CCCCCHHHHHHHHHHHCCCEEEEECCC-CC--CCCCHHHHHHHHHHC-----CCEEEECCCCHHHHHHHHCC---CCCCC
Q ss_conf 356598999999986046678970552-43--536379999886417-----97899186201244320001---23220
Q gi|254780349|r 157 DGLLDMHEIESLAIEYNPKLIIVGGTA-YS--RVWDWERFRSIADSI-----GAYLMADISHISGLVVGGQH---PSPVP 225 (433)
Q Consensus 157 ~~~ID~d~~~~~a~~~kPklIi~G~S~-y~--~~~d~~~l~eIa~~~-----ga~l~~D~aH~~GLIa~g~~---~~Pl~ 225 (433)
++.+|++.+++.++ .++|||.+-.|- |. ..+.+++++++++.+ .+++++|.. -|.| .-|..
T Consensus 140 ~g~~D~~~i~~ai~-~~tk~v~IQRS~GYs~R~slsi~~I~~~i~~vk~~~pd~ivfVDNC-------YGEFvE~~EP~~ 211 (405)
T pfam06838 140 NGKVDWQAVKTAIT-PNTKLIGIQRSKGYAWRPSLTIAEIKEMIKFVKEINPNVIVFVDNC-------YGEFVETKEPTH 211 (405)
T ss_pred CCCCCHHHHHHHCC-CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECC-------CCCCCCCCCCCC
T ss_conf 89849999997617-5645999962568666888799999999999997689939999788-------602026758530
Q ss_pred C-CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCC-HHHCHHHH--HHHHHHHHHHHHHHHHHHHCHHH--HHHHHHH
Q ss_conf 0-23567404565225---674489833620565016-64654322--34455666899999999735648--9999999
Q gi|254780349|r 226 H-CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKIN-SAIFPGLQ--GGPFMHSIAAKAVAFGEALSSEF--RDYAKQI 296 (433)
Q Consensus 226 ~-ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~-~avfPg~q--g~~~~~~iaa~aval~Ea~~~~f--~~Ya~qv 296 (433)
. ||+|.+|--|...| |-||-|..|+ |+-++.. +-.-||+= .|+-++. ++.+.+-.| ..-..+-
T Consensus 212 vGADliaGSLIKNpGGgiaptGGYIaGk~-dlVe~aa~RLTaPGiG~e~Gat~~~-------~r~~~QGlFlAP~vv~eA 283 (405)
T pfam06838 212 VGADLIAGSLIKNPGGGIAKTGGYIAGKE-ELVEQASYRLTAPGIGREGGATLGS-------LREMYQGLFLAPHVVGEA 283 (405)
T ss_pred CCHHHEECCCEECCCCCCCCCCCEEECHH-HHHHHHHHHHCCCCCCCCCCCCCCH-------HHHHHHHHCCCHHHHHHH
T ss_conf 16344012012479977367577785369-9999987520688346545768137-------899987860024999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHH----CCEEEECCCCCCC
Q ss_conf 988899999986168523345888981263166556767999998885----6718803789989
Q gi|254780349|r 297 VLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAESILGR----VSITCNKNSIPFD 357 (433)
Q Consensus 297 v~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~----~gI~~Nkn~iP~D 357 (433)
++-|--.|.-|.+.||+|.....+..-=+|..-.++ +.......|.. +-|-..-..+|++
T Consensus 284 lKga~~~A~~~e~lG~~v~P~~~~~R~DiIQav~l~-~~e~liaFC~~iQ~~sPVds~v~P~P~~ 347 (405)
T pfam06838 284 LKGAHFTARVLELLGFPVLPKYNEKRTDLIQAVKFG-DKEKLIAFCQAIQAASPIDSHVDPEPAD 347 (405)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECC-CHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 999999999999849946899999877457888679-9899999999987259967676556889
No 210
>TIGR01328 met_gam_lyase methionine gamma-lyase; InterPro: IPR006237 This family of sequences is a methionine gamma-lyase subset of a family of PLP-dependent trans-sulphuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine..
Probab=99.11 E-value=1.7e-09 Score=86.61 Aligned_cols=222 Identities=19% Similarity=0.235 Sum_probs=158.6
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00679999999999999871886301000016799999999831548748812334484111476654333332201366
Q gi|254780349|r 73 GCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 73 G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
|+=-++.+|. |...|=++|=| |=--||..|-.|++++++|=||.|++-.--.|= ++.-+.--...|+
T Consensus 57 gNPTv~~LE~----riA~LEg~EAa-vAt~SGMgAi~A~l~~~lkAgDh~i~d~~lYGC--------Tfall~~~ltkfg 123 (392)
T TIGR01328 57 GNPTVDLLER----RIAELEGAEAA-VATASGMGAIAATLLSLLKAGDHVISDETLYGC--------TFALLEDALTKFG 123 (392)
T ss_pred CCCHHHHHHH----HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC--------HHHHHHHHHHHHC
T ss_conf 7713778888----98754204677-887512899999999998528757743874201--------4899873267737
Q ss_pred CCCCCCCCCHHHHHHHHHHHCC--CEEEEECCCCC--CCCCHHHHHHHHHHCC-CEEEECCCCHHHHHHHHCCCCCCCC-
Q ss_conf 5832356598999999986046--67897055243--5363799998864179-7899186201244320001232200-
Q gi|254780349|r 153 VRKEDGLLDMHEIESLAIEYNP--KLIIVGGTAYS--RVWDWERFRSIADSIG-AYLMADISHISGLVVGGQHPSPVPH- 226 (433)
Q Consensus 153 ~d~~~~~ID~d~~~~~a~~~kP--klIi~G~S~y~--~~~d~~~l~eIa~~~g-a~l~~D~aH~~GLIa~g~~~~Pl~~- 226 (433)
++-+ .+|++..+++.+..+| |+|++...+.| +.+|++++..+|++.| +++++|... |....++|+..
T Consensus 124 i~v~--f~~~~~pee~~a~i~dnT~ivYfETPaNPtm~liD~e~v~r~A~~~gG~kVivDNTf-----atP~lt~P~alG 196 (392)
T TIGR01328 124 IDVK--FVDMASPEEVKAAIKDNTKIVYFETPANPTMKLIDLELVVRVAHEKGGVKVIVDNTF-----ATPYLTRPVALG 196 (392)
T ss_pred CEEE--EECCCCHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC-----CCHHHCCHHHCC
T ss_conf 5279--831787799998448997799986599875257759999999975298289985662-----770013803618
Q ss_pred CCEEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHH---CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
Q ss_conf 2356740456522567---4489833620565016646---543223445566689999999973564899999999888
Q gi|254780349|r 227 CHIVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAI---FPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNS 300 (433)
Q Consensus 227 ADvvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~av---fPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA 300 (433)
+|||..|-.|.+.|-- +|+|..+. |.-++|...- .-|-+=+||-.=+.-.. ++ -..--+++=-+||
T Consensus 197 ~D~VVHSATKYigGHgDvVaG~~~G~~-e~~q~iR~~g~KD~tG~ViSPfdAwL~lRG------Lk-TL~~RM~rhsenA 268 (392)
T TIGR01328 197 VDVVVHSATKYIGGHGDVVAGVLIGDA-ELLQRIRLVGVKDMTGAVISPFDAWLVLRG------LK-TLAVRMKRHSENA 268 (392)
T ss_pred CCEEEECCCCCCCCCHHHHHHHHCCCH-HHHHHHCCCCCCCCCCCEECHHHHHHHHHH------HH-HHHHHHHHHHHHH
T ss_conf 776894241213761221122110775-667440111100056650055789999743------66-7778887730538
Q ss_pred HHHHHHHHHCC--CCCCCCCCCCC
Q ss_conf 99999986168--52334588898
Q gi|254780349|r 301 QALAKKLQFLG--FDIVSGGTDNH 322 (433)
Q Consensus 301 ~~La~~L~~~G--~~vv~ggTd~H 322 (433)
+++|+.|++.- =.|..-|-+.|
T Consensus 269 ~kvAe~Lk~HPaVe~V~YPG~~~h 292 (392)
T TIGR01328 269 EKVAEYLKEHPAVEKVYYPGLEEH 292 (392)
T ss_pred HHHHHHHHCCCCCCEEECCCCCCC
T ss_conf 999998523886021236887788
No 211
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein; InterPro: IPR011340 This entry describes probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. The most closely related characterised proteins are active as cysteine desulphurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown..
Probab=99.10 E-value=1.9e-08 Score=79.40 Aligned_cols=326 Identities=19% Similarity=0.185 Sum_probs=208.0
Q ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHCCCCCE-ECCCHHHHHH-HHHHHH-----HH
Q ss_conf 0298999983051028865798887533600-67999999999999987188630-1000016799-999999-----83
Q gi|254780349|r 44 IVSRAVLEAQGSILTNKYAEGYPSKRYYGGC-QYVDDIENIAIERAKKLFNVNFV-NVQSHSGSQM-NQGVFL-----AL 115 (433)
Q Consensus 44 ~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~-~~~d~iE~la~~~a~~lF~a~~a-nvqp~SG~~A-n~av~~-----AL 115 (433)
-++.+|..|....|+..-|. --++|.+. ..++++-.-|.+-...|.||.-= +|=. |.++ .++--+ -.
T Consensus 32 q~Pq~V~dAv~~~L~~~~A~---~gg~~~~~G~~~~~~vd~AR~a~A~LlnA~~Pe~vv~--G~~~T~L~~~ls~a~~~~ 106 (410)
T TIGR01976 32 QIPQSVLDAVSAALTRSNAN---RGGAYESSGRKADQVVDDAREAVADLLNAESPEEVVF--GANATSLAYLLSRALSRR 106 (410)
T ss_pred CCCHHHHHHHHHHHHHCCCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEE--CCCHHHHHHHHHHHHHHH
T ss_conf 77734799999998741301---3767766306899999999999999726798885676--786689999999998512
Q ss_pred HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEE-CCCCC-CCCCHHHH
Q ss_conf 15487488123344841114766543333322013665832356598999999986046678970-55243-53637999
Q gi|254780349|r 116 MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVG-GTAYS-RVWDWERF 193 (433)
Q Consensus 116 l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G-~S~y~-~~~d~~~l 193 (433)
.+|||-|+.-.++|=+=.|= ..-...-....+.-..+|.++++++-+.++.++ .-|.+||=|- +|... -..|++.|
T Consensus 107 ~~~GDEvivt~LDHeaNisp-W~~~a~~~Ga~Vkw~~~d~~~~~L~~~~L~~Ll-s~rTRLVAvt~ASn~~Gs~~dl~A~ 184 (410)
T TIGR01976 107 WGPGDEVIVTRLDHEANISP-WLQAAEDAGAKVKWARVDEADGELHPDDLASLL-SPRTRLVAVTAASNLLGSIVDLAAL 184 (410)
T ss_pred CCCCCEEEEECCCCCCCHHH-HHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCC-CCCHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 68985589716766001368-999998389789996336231544869982366-8822555623440232551158899
Q ss_pred HHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCCCCCCCEEEEECCCCHHHHCC--HHHC-----HH
Q ss_conf 988641797899186201244320001232200--23567404565225674489833620565016--6465-----43
Q gi|254780349|r 194 RSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSLRGPRGGLIMTNHADLAKKIN--SAIF-----PG 264 (433)
Q Consensus 194 ~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~--~avf-----Pg 264 (433)
.+|++.+||++++|+.|++- -..+| +.. ||++++|-||-| ||+=|++..|. |+-+.+. +.-| |.
T Consensus 185 ~~~vh~aGA~v~VDaVhyaP----H~L~D-vqa~gaD~l~cSaYK~f-GPH~G~l~~R~-~~~~~l~~~k~~~~~d~~P~ 257 (410)
T TIGR01976 185 TELVHAAGALVYVDAVHYAP----HGLID-VQALGADFLVCSAYKFF-GPHLGILWGRP-ELLKSLPPYKLEFSEDTGPE 257 (410)
T ss_pred HHHHHHCCCEEEECHHHHCC----CCCCC-HHHHCCCEEEECCEECC-CCCEEEEEECH-HHHCCCCCCCCCCCCCCCCC
T ss_conf 99998759879881110045----66641-34227887998563116-88501787114-66404687633677888885
Q ss_pred --HHHHHHHHHHHHHHHHHH------------------HHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC----
Q ss_conf --223445566689999999------------------97356489999999988899999986168523345888----
Q gi|254780349|r 265 --LQGGPFMHSIAAKAVAFG------------------EALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTD---- 320 (433)
Q Consensus 265 --~qg~~~~~~iaa~aval~------------------Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd---- 320 (433)
=.|.|..--+||.--+.. |.+-..|..+.+-=-.=++.|-..|.+.|+=-|.|-+|
T Consensus 258 r~E~GT~~yEllAG~~AavdYLa~lg~nlA~~~~gsrR~~lv~sf~~~~ayE~~l~~~Ll~~L~~~P~~t~yG~~d~~R~ 337 (410)
T TIGR01976 258 RFELGTLQYELLAGVVAAVDYLAGLGRNLAASANGSRRERLVASFEAIEAYENRLAERLLAGLSDLPGVTVYGVQDEKRL 337 (410)
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHH
T ss_conf 14514556026789999999999823210689886558999999999999999999999999874895699735578646
Q ss_pred ---CCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCC----CCCC-CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf ---981263166556767999998885671880378998----9999-88898512246667307999899999999999
Q gi|254780349|r 321 ---NHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPF----DPES-PFITSGIRLGTPSGTTRGFKEKDFEYIGELIA 392 (433)
Q Consensus 321 ---~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~----D~~~-~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~ 392 (433)
.-.|...+ .++....+.+.|...||.+--+..-. +.-. .....++|+|..-=+| ++||.+++.
T Consensus 338 ~~RvPTv~F~v--~~~~P~~~~~~La~~~v~~~~GHfYA~~~~~~LGl~~~~GvvR~gLaHY~t-------~eevd~l~~ 408 (410)
T TIGR01976 338 AERVPTVAFTV--AGLSPQRVVRRLADQGVDVWAGHFYAVRLLRRLGLEADGGVVRVGLAHYNT-------AEEVDRLLE 408 (410)
T ss_pred HHCCCEEEEEE--CCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCCCCCEEEEEECCCCC-------HHHHHHHHH
T ss_conf 42597588972--787879999998536863312641168999865898988738985257798-------899999985
No 212
>PRK04311 selenocysteine synthase; Provisional
Probab=99.10 E-value=8.1e-08 Score=74.97 Aligned_cols=314 Identities=19% Similarity=0.215 Sum_probs=182.3
Q ss_pred CCHHHHHHHHCCCCCCC------CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCC
Q ss_conf 29899998305102886------579888753360067999999999999987188630100001679999999983154
Q gi|254780349|r 45 VSRAVLEAQGSILTNKY------AEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHP 118 (433)
Q Consensus 45 ~S~~v~~~l~S~l~nky------aeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~p 118 (433)
.|+.+.++..-..++-- ..|--|.|| +.+ .+..++|+||+-|-| .-....|-+-++.+|.+-
T Consensus 100 L~~~a~~~v~~~~~~YsnLE~dL~~G~RG~R~-------~~v----~~ll~~ltgaE~a~v-VNNNAaAv~L~l~~la~g 167 (465)
T PRK04311 100 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRD-------RAL----AALLCELTGAEDALV-VNNNAAAVLLALNALAAG 167 (465)
T ss_pred CCHHHHHHHHHHHCCCCHHHHECCCCCCCCCH-------HHH----HHHHHHHHCCCEEEE-ECCCHHHHHHHHHHHHCC
T ss_conf 88999999999962872155220138898708-------999----999998549873799-828489999999986279
Q ss_pred CCEEEEC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEE-EEECCCC-----CCCCCH
Q ss_conf 8748812--3344841114766543333322013665832356598999999986046678-9705524-----353637
Q gi|254780349|r 119 GDSFMGL--SLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLI-IVGGTAY-----SRVWDW 190 (433)
Q Consensus 119 GD~Il~~--~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklI-i~G~S~y-----~~~~d~ 190 (433)
.+-|.+= -.+-||-+---.....+| -..+..+....|+.=||+... ..+..+| .+-.|.| ....++
T Consensus 168 kEviVSRGelvEIGGsFRiPdim~~sG--a~L~EVGtTNrT~l~DY~~AI----~~~Ta~llkvH~SN~~i~GFt~~v~~ 241 (465)
T PRK04311 168 KEVIVSRGELVEIGGAFRIPDVMRQAG--AKLVEVGTTNRTHLRDYEDAI----NENTALLLKVHTSNYRIVGFTKEVSE 241 (465)
T ss_pred CEEEEECCCEEEECCCCCCHHHHHHCC--CEEEECCCCCCCCHHHHHHHC----CCCCEEEEEEECCCCCCCCCCCCCCH
T ss_conf 859996453565267656278998659--888743767888879999864----95654899995687654674688999
Q ss_pred HHHHHHHHHCCCEEEECCCCHHHHHH---HHCCCCC-----CCC-CCEEEECCCCCCCCCCCEEEEECCCCHHHHCCHHH
Q ss_conf 99998864179789918620124432---0001232-----200-23567404565225674489833620565016646
Q gi|254780349|r 191 ERFRSIADSIGAYLMADISHISGLVV---GGQHPSP-----VPH-CHIVTTTTHKSLRGPRGGLIMTNHADLAKKINSAI 261 (433)
Q Consensus 191 ~~l~eIa~~~ga~l~~D~aH~~GLIa---~g~~~~P-----l~~-ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~av 261 (433)
+++.+++++.|-.+++|..- -.|+- -|.-.-| +.. +|+||+|..|-|.|||.|||+.++ ++-++|.+.-
T Consensus 242 ~eL~~l~~~~~ip~~~DlGS-G~l~~~~~~gl~~Ep~v~~~l~~GaDLVtFSGDKLLGGPQAGIIvGkk-~lI~~lkknP 319 (465)
T PRK04311 242 AELAALGKEHGLPVVVDLGS-GSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGKK-ELIERLKKHP 319 (465)
T ss_pred HHHHHHHHHCCCCEEEECCC-CCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCEEECHH-HHHHHHHHCC
T ss_conf 99999998759927998887-521365312699999889999729988998554014798543374009-9999998687
Q ss_pred C-HHHHHHHHHHHHHHHHHHHHHHHCHHH--------H---HHHHHHHHHHHHHHHHHHHC--CC--CC------CCCCC
Q ss_conf 5-432234455666899999999735648--------9---99999998889999998616--85--23------34588
Q gi|254780349|r 262 F-PGLQGGPFMHSIAAKAVAFGEALSSEF--------R---DYAKQIVLNSQALAKKLQFL--GF--DI------VSGGT 319 (433)
Q Consensus 262 f-Pg~qg~~~~~~iaa~aval~Ea~~~~f--------~---~Ya~qvv~NA~~La~~L~~~--G~--~v------v~ggT 319 (433)
. -.+- ..--++|++--+|..-+.++. + .-...+-.-|+.|++.|... ++ .| ++||+
T Consensus 320 L~RAlR--vDKltLaaLeaTL~~Yl~~~~~~~~IP~l~mLt~~~~~L~~rA~~l~~~l~~~~~~~~v~i~~~~s~vGGGs 397 (465)
T PRK04311 320 LKRALR--VDKLTLAALEATLRLYLNPERLAEKIPTLRLLTRSPEELRARAERLAAALKAALGEFAVSVVPSFSQVGGGS 397 (465)
T ss_pred CHHHHC--CCHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
T ss_conf 614232--599999999999999959210001176899875999999999999999987425784289997766457887
Q ss_pred C----CCEEEECCCCCCCCHHHHHHHHHHCC--EEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 8----98126316655676799999888567--18803789989999888985122466673079998999999999999
Q gi|254780349|r 320 D----NHLMLVDLRSKRMTGKRAESILGRVS--ITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQ 393 (433)
Q Consensus 320 d----~H~vlvdl~~~~~~G~~a~~~Le~~g--I~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~ 393 (433)
- =.-+.+.+++.+++..+.++.|.... |+.- |.=+.-.+--|-.-++|++.|++-+.+
T Consensus 398 lP~~~lpS~~v~i~~~~~s~~~L~~~LR~~~~PII~R----------------I~~d~~~LDlRTi~~~d~~~i~~~l~~ 461 (465)
T PRK04311 398 LPVDRLPSAALTLTPKGRSLEALAARLRLLPPPVIGR----------------IEDGRLLLDLRTLEEEDEEALAAALLE 461 (465)
T ss_pred CCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEE----------------EECCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 8788788679998579999999999983699988999----------------988979999163897899999999999
Q ss_pred HHH
Q ss_conf 960
Q gi|254780349|r 394 ILD 396 (433)
Q Consensus 394 ~L~ 396 (433)
++.
T Consensus 462 il~ 464 (465)
T PRK04311 462 LLN 464 (465)
T ss_pred HHH
T ss_conf 961
No 213
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase; InterPro: IPR006238 This group of sequences represent cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys..
Probab=99.10 E-value=3.7e-09 Score=84.31 Aligned_cols=216 Identities=20% Similarity=0.222 Sum_probs=145.2
Q ss_pred CCHHHHHHHHHHHHHHHHHCCC--CCEECCCHHHHHHHHHHHH--HHHCCCC----EEEECCCCCCCC---CCCCCCCCC
Q ss_conf 0067999999999999987188--6301000016799999999--8315487----488123344841---114766543
Q gi|254780349|r 73 GCQYVDDIENIAIERAKKLFNV--NFVNVQSHSGSQMNQGVFL--ALMHPGD----SFMGLSLDSGGH---LTHGSSVNM 141 (433)
Q Consensus 73 G~~~~d~iE~la~~~a~~lF~a--~~anvqp~SG~~An~av~~--ALl~pGD----~Il~~~l~~GGH---lshg~~~~~ 141 (433)
|+=-=+.||.+ .-+|-++ +-|=+ .-||+.|-.++.. -++++|| +|++=+-=.||- || .....
T Consensus 47 GNPTR~~Le~~----~AkL~~aPq~~al~-~sSGMaAL~~~~~Glv~L~~GdnhtP~i~AgdDlYGG~~RLL~--~~~~~ 119 (415)
T TIGR01329 47 GNPTRTALESL----LAKLEKAPQERALA-VSSGMAALDVITRGLVLLNAGDNHTPEIIAGDDLYGGTDRLLT--QLASR 119 (415)
T ss_pred CCHHHHHHHHH----HHHHHCCCCCCEEE-EECCHHHHHHHHHEEEEEECCCCCCCEEEECCCCCCHHHHHHH--HHHHC
T ss_conf 98047899999----88651275353588-8613679988641145660788867707843745650478999--97432
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HCCCEEEEECCCCC--CCCCHHHHHHHHHHCC--CEEEECCCCHHHHHH
Q ss_conf 333322013665832356598999999986-04667897055243--5363799998864179--789918620124432
Q gi|254780349|r 142 SGKWFKAIPYNVRKEDGLLDMHEIESLAIE-YNPKLIIVGGTAYS--RVWDWERFRSIADSIG--AYLMADISHISGLVV 216 (433)
Q Consensus 142 ~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~-~kPklIi~G~S~y~--~~~d~~~l~eIa~~~g--a~l~~D~aH~~GLIa 216 (433)
+|....++ | + -|.|+++..+-. -+-|||++.....| +..|++++.|.|++.+ +.+++|.+=.+
T Consensus 120 ~G~vv~~V----~--t--~~~d~v~~~l~~~P~~~lv~LESPTNPl~~ivDI~~i~~~ah~~~~~~~V~vDNtmmS---- 187 (415)
T TIGR01329 120 SGVVVVHV----D--T--TDLDKVKAVLGDLPKTKLVLLESPTNPLIKIVDIRKIAEAAHALNEDALVVVDNTMMS---- 187 (415)
T ss_pred CCEEEEEC----C--C--CCHHHHHHHHHCCCHHEEEEECCCCCCCCEEECHHHHHHHHHHCCCCCEEEEECCCCC----
T ss_conf 85289974----8--9--8879999986068712076503888986246337899999985089718998222047----
Q ss_pred HHCCCCCCCC---CCEEEECCCCCCCCCC---CEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHH
Q ss_conf 0001232200---2356740456522567---448983362056501664654322344556668999999997356489
Q gi|254780349|r 217 GGQHPSPVPH---CHIVTTTTHKSLRGPR---GGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFR 290 (433)
Q Consensus 217 ~g~~~~Pl~~---ADvvt~sTHKtl~GPr---gGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~ 290 (433)
++.-+||+- ||||.-|-.|-|-|-. +|+|..|++++++|+-.-+- -+|+-+--.=.= ..++-..+=.-|
T Consensus 188 -Pl~c~PL~LnPGaD~v~~SATKfL~GH~D~MaGvl~~k~e~~~~~~yF~~N--s~G~gLaP~Dsw--LLlRGikTLaiR 262 (415)
T TIGR01329 188 -PLLCNPLELNPGADIVYESATKFLAGHSDVMAGVLAVKSEEIAKKVYFLIN--STGAGLAPFDSW--LLLRGIKTLAIR 262 (415)
T ss_pred -CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCHHHHHHEEEEEC--CCCCCCCHHHHH--HHHHHHHHHHHH
T ss_conf -667887566789757863534201464011335577737121000111233--667766513589--998668888887
Q ss_pred HHHHHHHHHHHHHHHHHH-HCCCCC
Q ss_conf 999999988899999986-168523
Q gi|254780349|r 291 DYAKQIVLNSQALAKKLQ-FLGFDI 314 (433)
Q Consensus 291 ~Ya~qvv~NA~~La~~L~-~~G~~v 314 (433)
-|.|| .||+++|.-|. ..||+-
T Consensus 263 ~ekQq--~NA~~iA~fL~nsCGfkP 285 (415)
T TIGR01329 263 LEKQQ--ENAVAIALFLENSCGFKP 285 (415)
T ss_pred HHHHH--HHHHHHHHHHHHCCCCCC
T ss_conf 98999--999999998632168886
No 214
>KOG1357 consensus
Probab=99.06 E-value=9.7e-09 Score=81.38 Aligned_cols=294 Identities=22% Similarity=0.270 Sum_probs=178.6
Q ss_pred CCCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
Q ss_conf 8657988875336006-799999999999998718863010000167999999998315487488123344841114766
Q gi|254780349|r 60 KYAEGYPSKRYYGGCQ-YVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSS 138 (433)
Q Consensus 60 kyaeG~pg~ryy~G~~-~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~ 138 (433)
||....-+-|-..|+. ..-++ .++..+++|.+.|-|-+ -|..+|-+.+.+|+.||.-|++-.+.|+--. .-
T Consensus 166 kygl~~css~~e~G~~~~hkel----E~l~A~f~g~e~a~vF~-mGf~TNs~~~p~l~~~gsLIiSDelNHaSi~---~G 237 (519)
T KOG1357 166 KYGLSRCSSRHEAGTTEEHKEL----EELVARFLGVEDAIVFS-MGFATNSMNIPSLLGKGSLIISDELNHASLI---TG 237 (519)
T ss_pred HHCCCCCCCCHHCCCHHHHHHH----HHHHHHHCCCCCEEEEE-CCCCCCCCCCCEEECCCCCEEEHHCCCHHEE---EC
T ss_conf 8463336642003637888789----99999866886448974-1543455676224458861644000330023---03
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---------HCC--CEEEEECCCCC---CCCCHHHHHHHHHHCCCEE
Q ss_conf 543333322013665832356598999999986---------046--67897055243---5363799998864179789
Q gi|254780349|r 139 VNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIE---------YNP--KLIIVGGTAYS---RVWDWERFRSIADSIGAYL 204 (433)
Q Consensus 139 ~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~---------~kP--klIi~G~S~y~---~~~d~~~l~eIa~~~ga~l 204 (433)
...||-..++..+ | |+..+|+++++ ++| |++||..-.|+ ...+.+++.++.++..|+|
T Consensus 238 aRLSgAtiRVfkH-----N---dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl 309 (519)
T KOG1357 238 ARLSGATTRVFRH-----N---DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYL 309 (519)
T ss_pred CCCCCCEEEEEEC-----C---CHHHHHHHHHHHHHCCCCCCCCCCHHEEEEECCCCCCCCEECCCHHHHHHHCCCCEEE
T ss_conf 0315854799863-----8---8777999999887527877688502203420110105672116199887520433799
Q ss_pred EECCCCHHHHH-HHHC----CCCCCC-CCCEEEECCCCCCCCCCCEEEEECCCCHHHHCCH----HHCHHHHHHHHHHHH
Q ss_conf 91862012443-2000----123220-0235674045652256744898336205650166----465432234455666
Q gi|254780349|r 205 MADISHISGLV-VGGQ----HPSPVP-HCHIVTTTTHKSLRGPRGGLIMTNHADLAKKINS----AIFPGLQGGPFMHSI 274 (433)
Q Consensus 205 ~~D~aH~~GLI-a~g~----~~~Pl~-~ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~----avfPg~qg~~~~~~i 274 (433)
..|.||..|-+ ++|. |..+=+ ..||+.+|+.|+| |.-||.|-+.+ ++-+.+.. +..-.+.+-|...++
T Consensus 310 ~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSf-ga~GGyiagsk-~lid~lrt~s~~~~yat~~sppvaqq~ 387 (519)
T KOG1357 310 YLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSF-GAAGGYIAGSK-ELIDYLRTPSPSALYATSLSPPVAQQI 387 (519)
T ss_pred EEECCCCCCCCCCCCCCEEECCCCCCHHHEEECCEEHHHC-CCCCCEECCCH-HHHHHCCCCCCCEEECCCCCHHHHHHH
T ss_conf 8401000255378887422346888246202201002104-56666002838-877410047884242036782889999
Q ss_pred -HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCC
Q ss_conf -8999999997356489999999988899999986168523345888981263166556767999998885671880378
Q gi|254780349|r 275 -AAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNS 353 (433)
Q Consensus 275 -aa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~ 353 (433)
-++-+-..|-.+..+++-.+|..+|++.+-..|...||-+. |--|+-.+.+-+-.-..- ....+.|-+-+|-+=--.
T Consensus 388 ~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivy-G~~dSpVvplll~~~~k~-~~f~r~~l~~nigvVvvg 465 (519)
T KOG1357 388 LTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVY-GNNDSPVVPLLLYGPAKI-VAFSREMLERNIGVVVVG 465 (519)
T ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE-CCCCCCCCEEEECCCCCC-CHHHHHHHHCCCEEEEEE
T ss_conf 987875248876407799999987502899875104828991-678887643663275314-078999986473599972
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 99899998889851224666730
Q gi|254780349|r 354 IPFDPESPFITSGIRLGTPSGTT 376 (433)
Q Consensus 354 iP~D~~~~~~~sGiRlGT~aiTt 376 (433)
=|-+|...+-.|+=.++--+
T Consensus 466 ---fPatpl~e~r~R~c~Sa~ht 485 (519)
T KOG1357 466 ---FPATPLLESRARFCLSASHT 485 (519)
T ss_pred ---CCCCHHHHHHHHHHHCCCCC
T ss_conf ---79945777677865423555
No 215
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.00 E-value=5.2e-08 Score=76.29 Aligned_cols=322 Identities=18% Similarity=0.236 Sum_probs=193.4
Q ss_pred HHCCCCCC--CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----HHHHCCCCCEECCCHHHH-
Q ss_conf 83888104--30102989999830510288657988875336006799999999999----998718863010000167-
Q gi|254780349|r 33 NDEIQLIA--SENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIER----AKKLFNVNFVNVQSHSGS- 105 (433)
Q Consensus 33 ~~~l~LiA--SEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~----a~~lF~a~~anvqp~SG~- 105 (433)
++.||+-| --..+.+.++++|- .+..-||- --| -+.-..|+|+.-.|.. ..+..|++- ||+..|.
T Consensus 15 r~~iNv~PiQrGGiLt~eArkal~-E~gDGYSv----CD~-C~~Grldei~kPpI~~F~~dlaeFlg~D~--~R~t~GAR 86 (382)
T COG1103 15 RGFINVNPIQRGGILTEEARKALL-EWGDGYSV----CDF-CLEGRLDEITKPPIKDFLEDLAEFLGMDE--VRVTAGAR 86 (382)
T ss_pred CCCCCCCHHHCCCCCCHHHHHHHH-HHCCCCCH----HHH-HCCCCCCCCCCCCHHHHHHHHHHHHCCCE--EEECCCCH
T ss_conf 176034723406868799999999-86488634----431-04574110258858889998898719863--44236512
Q ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH------CCCEEEE
Q ss_conf 9999999983154874881233448411147665433333220136658323565989999999860------4667897
Q gi|254780349|r 106 QMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEY------NPKLIIV 179 (433)
Q Consensus 106 ~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~------kPklIi~ 179 (433)
-|.++|+.||.++||.|..-++. |+|.--.....|.....+| ..+.-++.|+.+...+.+++. .|.|..+
T Consensus 87 e~KfavMhal~~~gd~vV~D~~a---HYttyvAAEragl~v~eVp-~tg~Pey~i~~e~y~~viee~~~~~g~~~~lall 162 (382)
T COG1103 87 EAKFAVMHALCKEGDWVVVDSLA---HYTTYVAAERAGLNVAEVP-NTGYPEYKITPEGYAEVIEEVKDEGGDPPALALL 162 (382)
T ss_pred HHHHHHHHHHCCCCCEEEECCCC---HHHHHHHHHHCCCEEEECC-CCCCCCEEECHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 56799999751589889974742---2788999986397589667-8999845766888899999998624898448999
Q ss_pred E--CCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCCC--CCCCEEEEECCCCH
Q ss_conf 0--5524353637999988641797899186201244320001232200--2356740456522--56744898336205
Q gi|254780349|r 180 G--GTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSLR--GPRGGLIMTNHADL 253 (433)
Q Consensus 180 G--~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl~--GPrgGiI~~~~~e~ 253 (433)
- -+.|.-.-|.+++.+||++.|..++...|-.+| .+|--.++ ||++.+|-||+.. ||-|=+-++ .|+
T Consensus 163 Th~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~G-----rmpvs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~--eE~ 235 (382)
T COG1103 163 THVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVG-----RMPVSGKEIGADFIVGSGHKSMAASAPIGVLAMS--EEW 235 (382)
T ss_pred ECCCCCCCCCHHHHHHHHHHHHCCCCEEEECCEEEC-----CCCCCCCCCCCCEEEECCCCCHHCCCCEEEEEEH--HHH
T ss_conf 635777577221678999998729956851210223-----2113665567877972485300114870477513--677
Q ss_pred HHHCCHH--H-CHH---------HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCC
Q ss_conf 6501664--6-543---------22344556668999999997356489999999988899999986168-523345888
Q gi|254780349|r 254 AKKINSA--I-FPG---------LQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLG-FDIVSGGTD 320 (433)
Q Consensus 254 ~~~i~~a--v-fPg---------~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G-~~vv~ggTd 320 (433)
++.+-+. . ||. .-|-|.+--||+.-.--.- -+. =++-|++||.+.++|.+-| +..++---.
T Consensus 236 ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eR-----Vkr-WdeEv~kaR~fv~elEkigg~~qlG~rPk 309 (382)
T COG1103 236 AEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVER-----VKR-WDEEVEKARWFVAELEKIGGVKQLGERPK 309 (382)
T ss_pred HHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHCCHHHHHH-----HHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 789986315446533256614324684389987407799999-----987-88999999999999997430887177976
Q ss_pred CCEEEECCCC-CC-------CCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCH---HHHHCCCCHHHHHHHHH
Q ss_conf 9812631665-56-------7679999988856718803789989999888985122466---67307999899999999
Q gi|254780349|r 321 NHLMLVDLRS-KR-------MTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTP---SGTTRGFKEKDFEYIGE 389 (433)
Q Consensus 321 ~H~vlvdl~~-~~-------~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~---aiTtrG~~e~em~~iA~ 389 (433)
+|-++-=-++ +. -.|.-..+-|.+-||. |||-|.. -+.+.|+..++.+.+++
T Consensus 310 ~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~-----------------GI~~G~Tk~~K~svyGl~~Eqve~V~~ 372 (382)
T COG1103 310 NHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIH-----------------GIQPGQTKYFKLSVYGLSWEQVEYVVD 372 (382)
T ss_pred CCCEEEECCCHHHHHHHHCCCCCEEEHHHHHHCCCC-----------------CCCCCCEEEEEEEEECCCHHHHHHHHH
T ss_conf 564255337128999875767854668988765866-----------------506675137888750577999999999
Q ss_pred HHHHHHH
Q ss_conf 9999960
Q gi|254780349|r 390 LIAQILD 396 (433)
Q Consensus 390 li~~~L~ 396 (433)
-+.+++.
T Consensus 373 afkeI~e 379 (382)
T COG1103 373 AFKEIAE 379 (382)
T ss_pred HHHHHHH
T ss_conf 9999998
No 216
>KOG0257 consensus
Probab=98.98 E-value=1.9e-07 Score=72.33 Aligned_cols=348 Identities=21% Similarity=0.234 Sum_probs=185.3
Q ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHCCCCC---CC-CCCC-CHHH----HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 764697858999999999999998388810---43-0102-9899----9983051028865798887533600679999
Q gi|254780349|r 10 FQQSLIESDPDVFSLIGQESCRQNDEIQLI---AS-ENIV-SRAV----LEAQGSILTNKYAEGYPSKRYYGGCQYVDDI 80 (433)
Q Consensus 10 ~~~~l~~~Dpei~~~i~~e~~rq~~~l~Li---AS-EN~~-S~~v----~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~i 80 (433)
.++.|....|.|+..+.+ +.-++.+.. .. -++. +..| ..+.--..+|.|+-|| | +-+-.
T Consensus 8 ~~~~l~~~~~~vw~e~~~---la~e~~~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~------G---~p~L~ 75 (420)
T KOG0257 8 RNRNLSTSKPYVWTEINR---LAAEHKVPNPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGY------G---LPQLR 75 (420)
T ss_pred CCCCCCCCCCCHHHHHHH---HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCC------C---CHHHH
T ss_conf 300025557717999999---99862798746678889997489999999874253002234667------9---46789
Q ss_pred HHHHHHHHHHHCCCCC---EECCCHHHHHHHHH-HHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC----
Q ss_conf 9999999998718863---01000016799999-999831548748812334484111476654333332201366----
Q gi|254780349|r 81 ENIAIERAKKLFNVNF---VNVQSHSGSQMNQG-VFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN---- 152 (433)
Q Consensus 81 E~la~~~a~~lF~a~~---anvqp~SG~~An~a-v~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~---- 152 (433)
+.| .+.-++++|-.. -+|-..+|....+. ++++|+.|||.|+.+....--... .+...|-.-.+++..
T Consensus 76 ~aL-~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~---~~~maG~tpv~v~~~~~~g 151 (420)
T KOG0257 76 KAL-AKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIP---QVVMAGGTPVFVPLKPKEG 151 (420)
T ss_pred HHH-HHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHH---HHHHCCCCCEEECCCCCCC
T ss_conf 999-999888735555786657995382378999999871899879993575122456---7764488424405653446
Q ss_pred -CCCCCCCCCHHHHHHHHHHHCCCEEEEECC------CCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHC-CCC--
Q ss_conf -583235659899999998604667897055------2435363799998864179789918620124432000-123--
Q gi|254780349|r 153 -VRKEDGLLDMHEIESLAIEYNPKLIIVGGT------AYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQ-HPS-- 222 (433)
Q Consensus 153 -~d~~~~~ID~d~~~~~a~~~kPklIi~G~S------~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~-~~~-- 222 (433)
+...+..+|.++++. +...|+|+|++-.. +|+|. .+++|++||.++|.++++|.. +-=||-.|. |++
T Consensus 152 ~~~s~~~~~D~~~le~-~~t~kTk~Ii~ntPhNPtGkvfsRe-eLe~ia~l~~k~~~lvisDev-Ye~~v~d~~~h~r~a 228 (420)
T KOG0257 152 NVSSSDWTLDPEELES-KITEKTKAIILNTPHNPTGKVFSRE-ELERIAELCKKHGLLVISDEV-YEWLVYDGNKHIRIA 228 (420)
T ss_pred CCCCCCCCCCHHHHHH-HCCCCCCEEEEECCCCCCCCCCCHH-HHHHHHHHHHHCCEEEEEHHH-HHHHHHCCCCCEEEE
T ss_conf 6557666689699986-4367764799948999867305799-999999999878979998257-478821787651462
Q ss_pred --CCCCCC-EEEECCCCCCC--CCCCEEEEECCCCHHHHC----CHHHCHHHHHHHHHHHHHHHHHHHHHHHCHH---HH
Q ss_conf --220023-56740456522--567448983362056501----6646543223445566689999999973564---89
Q gi|254780349|r 223 --PVPHCH-IVTTTTHKSLR--GPRGGLIMTNHADLAKKI----NSAIFPGLQGGPFMHSIAAKAVAFGEALSSE---FR 290 (433)
Q Consensus 223 --Pl~~AD-vvt~sTHKtl~--GPrgGiI~~~~~e~~~~i----~~avfPg~qg~~~~~~iaa~aval~Ea~~~~---f~ 290 (433)
|=-|-. +-.+|--|||. |=|=|-+...+ .+..-. .+-+|+ ...-.+....+|.+..+. +.+|+ |.
T Consensus 229 slPgm~ertitvgS~gKtf~~TGWrlGW~igp~-~L~~~~~~vh~~~~~~-~~Tp~q~A~a~a~~~~~~-~~~p~~~y~~ 305 (420)
T KOG0257 229 SLPGMYERTITVGSFGKTFGVTGWRLGWAIGPK-HLYSALFPVHQNFVFT-CPTPIQEASAAAFALELA-CLQPGGSYFI 305 (420)
T ss_pred CCCCHHHEEEEECCCCCEEEEEEEEEEEEECHH-HHHHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHH-CCCCCCHHHH
T ss_conf 277622447885145210000345653464548-7646478786455202-680778999998740020-1687620689
Q ss_pred H-HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCE-EEECCCCCCCCCCCCCCCCC-
Q ss_conf 9-99999988899999986168523345888981263166556767999998885671-88037899899998889851-
Q gi|254780349|r 291 D-YAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAESILGRVSI-TCNKNSIPFDPESPFITSGI- 367 (433)
Q Consensus 291 ~-Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI-~~Nkn~iP~D~~~~~~~sGi- 367 (433)
. +-+...+|-+.|++.|.+.|+++.. +--.--+|+|+. ..-++...+..+++-.. .+-+ +++
T Consensus 306 ~~~~~~y~~krdil~k~L~~lg~~v~~-p~gayyl~adfs-~~~~~~~~~~~~~~~~d~~~~~-------------wl~~ 370 (420)
T KOG0257 306 TELVKEYKEKRDILAKALEELGLKVTG-PEGAYYLWADFS-LAKSWPFFEEILEKPDDFKFVR-------------WLIK 370 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCEEEEEECC-CCCCCCCCHHHCCCCCCEEEEH-------------HHHC
T ss_conf 987999999999999999866985226-898438999546-5345786222225777336452-------------1305
Q ss_pred CCCCHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 224666730799989999999999999
Q gi|254780349|r 368 RLGTPSGTTRGFKEKDFEYIGELIAQI 394 (433)
Q Consensus 368 RlGT~aiTtrG~~e~em~~iA~li~~~ 394 (433)
+.|...+-.-.++..+-..+++-+.+.
T Consensus 371 ~~Gv~~IP~saF~s~~~~~~~~~~~r~ 397 (420)
T KOG0257 371 EGGVVVIPPSAFGSREHIKVAERLVRF 397 (420)
T ss_pred CCCEEEECCHHCCCCHHHHHHHHHHHH
T ss_conf 586799472113783556788777888
No 217
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.98 E-value=1.3e-06 Score=66.67 Aligned_cols=313 Identities=19% Similarity=0.266 Sum_probs=206.3
Q ss_pred CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC--------EECCCHHHHHHH--HHH
Q ss_conf 0102989999830510288657988875336006799999999999998718863--------010000167999--999
Q gi|254780349|r 42 ENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNF--------VNVQSHSGSQMN--QGV 111 (433)
Q Consensus 42 EN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~--------anvqp~SG~~An--~av 111 (433)
.-.+-++|++|..-.+..- ..++|-+.+- +.....+-++-|||.++ +-+|.++||-|. .+=
T Consensus 42 k~pvl~aV~~Ae~~l~~~~------~~k~Yl~i~G---~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~ 112 (396)
T COG1448 42 KTPVLRAVKKAEKRLLEQE------KTKNYLPIEG---LPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAAD 112 (396)
T ss_pred CCCHHHHHHHHHHHHHCCC------CCCCCCCCCC---CHHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCHHHHHHHH
T ss_conf 8612189999999740265------6655578677---088999999996489817777655763006776128999999
Q ss_pred HHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHCCC-EEEE-ECCCCCC--
Q ss_conf 99831548748812334484111476654333332201366-58323565989999999860466-7897-0552435--
Q gi|254780349|r 112 FLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN-VRKEDGLLDMHEIESLAIEYNPK-LIIV-GGTAYSR-- 186 (433)
Q Consensus 112 ~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~-~d~~~~~ID~d~~~~~a~~~kPk-lIi~-G~S~y~~-- 186 (433)
|.+-..|..+|-..+..-+-| +..|...++++..|+ +|.++..+|+|.+-..++..... +|++ |..-.|-
T Consensus 113 fl~~~~~~~~vwis~PtW~NH-----~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~ 187 (396)
T COG1448 113 FLARFFPDATVWISDPTWPNH-----KAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGI 187 (396)
T ss_pred HHHHHCCCCEEEECCCCCHHH-----HHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCC
T ss_conf 999848886288479982758-----999996698145310354666642579999999737899889983677898899
Q ss_pred ---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCC--CCCC-C-----CEEEECCCCCCC--CCC-CEEE-EECCC
Q ss_conf ---363799998864179789918620124432000123--2200-2-----356740456522--567-4489-83362
Q gi|254780349|r 187 ---VWDWERFRSIADSIGAYLMADISHISGLVVGGQHPS--PVPH-C-----HIVTTTTHKSLR--GPR-GGLI-MTNHA 251 (433)
Q Consensus 187 ---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~--Pl~~-A-----Dvvt~sTHKtl~--GPr-gGiI-~~~~~ 251 (433)
.-.|+++.++..+-|-+-++|+| +-|+=.| .-.+ +++. + =+|..|.-|.|. |-| |+++ ++.+.
T Consensus 188 D~t~~qW~~l~~~~~~r~lip~~D~A-YQGF~~G-leeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~ 265 (396)
T COG1448 188 DPTEEQWQELADLIKERGLIPFFDIA-YQGFADG-LEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDA 265 (396)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEHH-HHHHCCC-HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCEEEEEECCH
T ss_conf 99999999999999976982366324-4442124-677899999999729858997100012443430023158882788
Q ss_pred CHHHHCCHHH---CHHHHHHHHHHHHHHHHHHH-----HHHHCHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCC
Q ss_conf 0565016646---54322344556668999999-----99735648999999998889999998616----852334588
Q gi|254780349|r 252 DLAKKINSAI---FPGLQGGPFMHSIAAKAVAF-----GEALSSEFRDYAKQIVLNSQALAKKLQFL----GFDIVSGGT 319 (433)
Q Consensus 252 e~~~~i~~av---fPg~qg~~~~~~iaa~aval-----~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~----G~~vv~ggT 319 (433)
+.+.++.+.+ --++-|+|--|-.+-.+.-| ++..+.|-..+..++.+=.+.|.+.|.+. .|+.+. .
T Consensus 266 ~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~--~ 343 (396)
T COG1448 266 EEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFII--S 343 (396)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH--H
T ss_conf 99999999999999863589841239999999489999999999999999999999999999998627886622475--4
Q ss_pred CCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 8981263166556767999998885671880378998999988898512246667307999899999999999996
Q gi|254780349|r 320 DNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 320 d~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
.+-++- -.|++..++.+..|+-||.+-+ || ||+.+.+|. ..++.+|+-|..++
T Consensus 344 Q~GMFs----y~Gls~~QV~rLree~~IY~v~-------------sG-Ri~vaGl~~-----~ni~~va~ai~~v~ 396 (396)
T COG1448 344 QRGMFS----YTGLSPEQVDRLREEFGIYLVA-------------SG-RINVAGLNT-----SNIDYVAKAIAAVL 396 (396)
T ss_pred CCCEEE----CCCCCHHHHHHHHHHCCEEEEC-------------CC-EEEECCCCH-----HHHHHHHHHHHHHC
T ss_conf 675244----5899999999999856679953-------------78-146536874-----40899999998649
No 218
>pfam03841 SelA L-seryl-tRNA selenium transferase.
Probab=98.97 E-value=3.3e-07 Score=70.72 Aligned_cols=276 Identities=19% Similarity=0.228 Sum_probs=155.1
Q ss_pred CCCHHHHHHHHCCCCCCC------CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHC
Q ss_conf 029899998305102886------57988875336006799999999999998718863010000167999999998315
Q gi|254780349|r 44 IVSRAVLEAQGSILTNKY------AEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMH 117 (433)
Q Consensus 44 ~~S~~v~~~l~S~l~nky------aeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~ 117 (433)
.+|+.+.++......+-- +.|--|.| .+. ..++.++|+||+-|-| .-+...|-+-++.+|.+
T Consensus 17 ~l~~~a~~a~~~~~~~y~nLE~dl~~g~RG~R-------~~~----~~~ll~~ltgaE~a~v-VNnnAaAv~L~l~~la~ 84 (367)
T pfam03841 17 LLSEEAVEAAKEAARHYSNLEYDLESGKRGSR-------DSH----LEELLCELTGAEDALV-VNNNAAAVLLVLNTLAQ 84 (367)
T ss_pred CCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCH-------HHH----HHHHHHHHHCCCEEEE-ECCCHHHHHHHHHHHHC
T ss_conf 89999999999986177203666741776635-------789----9999998639865999-87838999999998754
Q ss_pred CCCEEEECCCCCCCCCCC-CCC------CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEE-EEECCCCC----
Q ss_conf 487488123344841114-766------543333322013665832356598999999986046678-97055243----
Q gi|254780349|r 118 PGDSFMGLSLDSGGHLTH-GSS------VNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLI-IVGGTAYS---- 185 (433)
Q Consensus 118 pGD~Il~~~l~~GGHlsh-g~~------~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklI-i~G~S~y~---- 185 (433)
-.+-|++ =||+-. |.. ...+| -..+..+....++.=||+.. ...+..+| .+-.|.|-
T Consensus 85 g~evivS-----RGelVeiGgsfRiPdim~~sG--a~LvEVGtTNrT~l~DYe~A----I~e~Ta~llkVH~SN~~i~GF 153 (367)
T pfam03841 85 GKEVIIS-----RGELVEIGGSFRIPDIMKQSG--ARLVEVGTTNRTHLKDYEQA----INENTALLMKVHTSNYRIQGF 153 (367)
T ss_pred CCCEEEE-----CCEEECCCCCCCCHHHHHHCC--CEEEEECCCCCCCHHHHHHH----CCCCCEEEEEEECCCCEECCC
T ss_conf 8905775-----554512387544089999659--78998256688898999987----082461899994265122374
Q ss_pred -CCCCHHHHHHHHHHCCCEEEECCCCHHHHHH---HHCCCCC-----CCC-CCEEEECCCCCCCCCCCEEEEECCCCHHH
Q ss_conf -5363799998864179789918620124432---0001232-----200-23567404565225674489833620565
Q gi|254780349|r 186 -RVWDWERFRSIADSIGAYLMADISHISGLVV---GGQHPSP-----VPH-CHIVTTTTHKSLRGPRGGLIMTNHADLAK 255 (433)
Q Consensus 186 -~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa---~g~~~~P-----l~~-ADvvt~sTHKtl~GPrgGiI~~~~~e~~~ 255 (433)
...+++++.++|++.|..+++|..- -.|+- -|+-+-| +.. ||+||+|..|-|.|||.|||+.++ ++-+
T Consensus 154 t~~v~~~el~~la~~~~ip~i~DlGS-G~l~d~~~~gl~~Ep~v~~~l~~GaDlV~FSGDKLLGGPQAGII~Gkk-~lI~ 231 (367)
T pfam03841 154 TKEVSLAELVALGKEHGLPVYYDLGS-GSLVDLSQYGLPKEPTVQELLALGVDLVSFSGDKLLGGPQAGIIVGKK-ELIE 231 (367)
T ss_pred CCCCCHHHHHHHHHHCCCCEEEECCC-CCEECCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCEEEECH-HHHH
T ss_conf 67799999999998769967997586-631122001799999899999739988998676456898532476459-9999
Q ss_pred HCCHHH-CHHHHHHHHHHHHHHHHHHHHHHHCHHHH-----------HHHHHHHHHHHHHHHHHHHC---CCCC------
Q ss_conf 016646-54322344556668999999997356489-----------99999998889999998616---8523------
Q gi|254780349|r 256 KINSAI-FPGLQGGPFMHSIAAKAVAFGEALSSEFR-----------DYAKQIVLNSQALAKKLQFL---GFDI------ 314 (433)
Q Consensus 256 ~i~~av-fPg~qg~~~~~~iaa~aval~Ea~~~~f~-----------~Ya~qvv~NA~~La~~L~~~---G~~v------ 314 (433)
+|.+.- +-.+- ..--++|++--+|..-+.++.. .=...+.+.|+.|++.|... ++.+
T Consensus 232 ~ikknPL~RAlR--vDKltLaaLeatL~~Yl~~~~~~~~IP~l~mL~~~~~~L~~rA~~l~~~l~~~~~~~~~~~v~~~~ 309 (367)
T pfam03841 232 RLKKNPLKRALR--VDKLTLAALEATLRLYLNPEKLYEKIPTLRLLTQPLKELRAKAERLQKLLKARLGSGAEVSVEPSF 309 (367)
T ss_pred HHHHCCHHHHHC--CCHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 746474445444--588999999999999849000001165899863999999999999999976751688259999777
Q ss_pred --CCCCCCC----CEEEECCCCCCCCHHHHHHHHHHCC
Q ss_conf --3458889----8126316655676799999888567
Q gi|254780349|r 315 --VSGGTDN----HLMLVDLRSKRMTGKRAESILGRVS 346 (433)
Q Consensus 315 --v~ggTd~----H~vlvdl~~~~~~G~~a~~~Le~~g 346 (433)
++||+-- .-+.+.+++.+.+-.+.+++|....
T Consensus 310 s~vGgGslP~~~lpS~al~i~~~~~~~~~l~~~LR~~~ 347 (367)
T pfam03841 310 SQIGGGSLPVKELPSAAVTIRPENMALDALKLRLRLLD 347 (367)
T ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCC
T ss_conf 74378878777688779998579899999999973799
No 219
>PRK05839 hypothetical protein; Provisional
Probab=98.97 E-value=4.5e-07 Score=69.76 Aligned_cols=299 Identities=16% Similarity=0.114 Sum_probs=160.0
Q ss_pred HHHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC--CEECCCHHHHHH
Q ss_conf 983888104301--0298999983051028865798887533600679999999999999871886--301000016799
Q gi|254780349|r 32 QNDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVN--FVNVQSHSGSQM 107 (433)
Q Consensus 32 q~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~--~anvqp~SG~~A 107 (433)
.++-|+|--.|- -+++.+++++..... +. .-|+-..-..++-+-..+..++-||.+ .-||-..+|+.-
T Consensus 23 ~~dvi~L~iG~pdf~~P~~i~~A~~~~~~-----~~---~~Y~~~~G~peLR~Aia~~~~~~~g~~v~~~~I~vt~Ga~~ 94 (376)
T PRK05839 23 KGELLDLTIGEPQFETPKFIQDALKNNAH-----LL---NKYPKSAGEEELREAQRGFFKRRFNIELKENELIPTFGTRE 94 (376)
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHH-----CC---CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHH
T ss_conf 99848796889999989999999998644-----48---97799878299999999999998689998024998178899
Q ss_pred HHHH-HHHH--HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 9999-9983--1548748812334484111476654333332201366583235-6598999999986046678970552
Q gi|254780349|r 108 NQGV-FLAL--MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDG-LLDMHEIESLAIEYNPKLIIVGGTA 183 (433)
Q Consensus 108 n~av-~~AL--l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~-~ID~d~~~~~a~~~kPklIi~G~S~ 183 (433)
-+.. ..++ ..|||.|+..+... .++...+...| .+.+.++++.+++ ..|+++.+ ..+.|+|++....
T Consensus 95 al~~~~~~~l~~~~~~~i~~p~P~y---~~y~~~~~~~g--~~~v~v~l~~e~~~~~~l~~~~----~~~tk~iilnsP~ 165 (376)
T PRK05839 95 VLFNFPQFVLFDKQNPTIAYPNPFY---QIYEGAAIASR--AKSLYMNLTKENDFTPSLNEKE----LQEVDLVILNSPN 165 (376)
T ss_pred HHHHHHHHHHCCCCCCEEEECCCCC---HHHHHHHHHCC--CCCEEECCCCCCCCCCCCCHHH----HHCCCEEEECCCC
T ss_conf 9999999984579998899789876---32589998616--8632424640258886411876----5058999988998
Q ss_pred CC--C---CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCC---------C-EEEECCCCCCC--CCCCEEE
Q ss_conf 43--5---36379999886417978991862012443200012322002---------3-56740456522--5674489
Q gi|254780349|r 184 YS--R---VWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHC---------H-IVTTTTHKSLR--GPRGGLI 246 (433)
Q Consensus 184 y~--~---~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~A---------D-vvt~sTHKtl~--GPrgGiI 246 (433)
.| . .-+++++.++|.+++.+++.|..|-- |+-++.+++.+..+ + |+.+|.-|++. |=|-|.|
T Consensus 166 NPTG~v~s~eel~~i~~la~~~~~~iisDEiY~~-l~~~~~~~s~~~~~~~~~~~~~~~vi~i~s~SK~~~~~G~RiG~i 244 (376)
T PRK05839 166 NPTGRTLSLEELISWVKLALKYDFILINDECYSE-IYENTPPPSLLEASILAGNESFKNVLVINSISKRSSAPGLRSGFI 244 (376)
T ss_pred CCCCCCCCHHHHHHHHHHHCCCEEEEEEECCHHH-HHCCCCCCCHHHHHHHHCCCCCCCEEEEECCHHHCCCCCCCEEEE
T ss_conf 9988236399999998751473699998068288-637999876888656514553253799923203201465406999
Q ss_pred EECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-HHHHHHHHHHHHCCCCCC-CCCCCCCEE
Q ss_conf 833620565016646543223445566689999999973564899999999-888999999861685233-458889812
Q gi|254780349|r 247 MTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIV-LNSQALAKKLQFLGFDIV-SGGTDNHLM 324 (433)
Q Consensus 247 ~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv-~NA~~La~~L~~~G~~vv-~ggTd~H~v 324 (433)
...+ ++.+++.+..--...+.+...+.|+. .++.+ .+..++.++.. +|.+ ++.. .+.+. ..|| -.+
T Consensus 245 ~~~~-~~i~~~~~~~~~~~~~~~~~~q~aa~-~a~~~---~~~~~~~r~~~~~~~~-~~~~----~l~~~~P~g~--fy~ 312 (376)
T PRK05839 245 AGDS-SILKKYKAYRTYLGCASPLPLQKAAA-VAWLD---DEHAEFFRNIYAKNLK-LARE----ILGITIPPYT--FYV 312 (376)
T ss_pred ECCH-HHHHHHHHHHHHCCCCCCHHHHHHHH-HHHCC---CHHHHHHHHHHHHHHH-HHHH----HCCCCCCCEE--EEE
T ss_conf 7899-99999998656436785199999999-99729---6689999999999999-9987----5398889803--799
Q ss_pred EECCCCCCCCHHH-HHHHHHHCCEEEECCCCCCCCCCCCCC-----CCCCCCC
Q ss_conf 6316655676799-999888567188037899899998889-----8512246
Q gi|254780349|r 325 LVDLRSKRMTGKR-AESILGRVSITCNKNSIPFDPESPFIT-----SGIRLGT 371 (433)
Q Consensus 325 lvdl~~~~~~G~~-a~~~Le~~gI~~Nkn~iP~D~~~~~~~-----sGiRlGT 371 (433)
|+++.+ +.+ ++..|++.|+.+. ||. .|-. .-+||.-
T Consensus 313 ~~~~~d----~~~f~~~Ll~~~gV~v~----PG~---~FG~~~~g~~~vRls~ 354 (376)
T PRK05839 313 WLPVQN----DENFTKKLYQNEGIKVL----PGS---YLGRNGIGKDYVRLAL 354 (376)
T ss_pred EEECCC----HHHHHHHHHHCCCEEEE----CCC---CCCCCCCCCCEEEEEE
T ss_conf 866899----89999999980999997----740---0179999899699997
No 220
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=98.96 E-value=3.7e-07 Score=70.35 Aligned_cols=273 Identities=15% Similarity=0.110 Sum_probs=163.9
Q ss_pred HHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 99998718863010000167999999998315487488123344841114766543333322013665832356598999
Q gi|254780349|r 86 ERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEI 165 (433)
Q Consensus 86 ~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~ 165 (433)
+...+.++.+.-+|-...|+.--+..+..+++||+.++ +....+-+- ......|.....+++.. .+ .|.+
T Consensus 47 ~~iA~~~~v~~~~I~vgnGs~ElI~~l~~~~~~~~~~i-~~PtF~~Y~---~~a~~~g~~~~~vp~~~--~~--~~~~-- 116 (332)
T PRK06425 47 DQIKIYTQGLKIKVLIGPGLTHFIYRLLSYINVGNIII-VEPNFNEYK---GYAFTHGIRISALPFNL--IN--NNPE-- 116 (332)
T ss_pred HHHHHHHCCCHHHEEECCCHHHHHHHHHHHHCCCCEEE-ECCCHHHHH---HHHHHCCCEEEEECCCC--CC--CCHH--
T ss_conf 99998869686739982209999999999868999899-688889999---99998699899957433--32--5888--
Q ss_pred HHHHHHHCCCEEEEECCCCC--CCCCHHH---HHHHHHHCCCEEEECCCCHHHHHHHHCCCCCC----CCCC-EEEECCC
Q ss_conf 99998604667897055243--5363799---99886417978991862012443200012322----0023-5674045
Q gi|254780349|r 166 ESLAIEYNPKLIIVGGTAYS--RVWDWER---FRSIADSIGAYLMADISHISGLVVGGQHPSPV----PHCH-IVTTTTH 235 (433)
Q Consensus 166 ~~~a~~~kPklIi~G~S~y~--~~~d~~~---l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl----~~AD-vvt~sTH 235 (433)
.++..+|++|++.....| ..++-++ +.+++.+.++++++|.|- .-++- ...++.+ .+-. +|+-|.-
T Consensus 117 --~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~~vvvDEAY-~ef~~-~~~~~~~~l~~~~~NliVlRSfS 192 (332)
T PRK06425 117 --ILNNYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAF-IDFVP-NRAEEDVLLNRSYGNVIIGRSLT 192 (332)
T ss_pred --HHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECHH-HHHHC-CCCHHHHHHHHCCCCEEEEEEHH
T ss_conf --884589898999418172013489999999999605269799996413-56514-66343577764079889992007
Q ss_pred CC--CCCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 65--2256744898336205650166465432234455666899999999735648999999998889999998616852
Q gi|254780349|r 236 KS--LRGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFD 313 (433)
Q Consensus 236 Kt--l~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~ 313 (433)
|+ |+|-|=|.+++++ ++.+.+.+..-|-.++++ |.-+++..+ .....+...+.+.+.-..|.+.|.+.|+.
T Consensus 193 K~~gLaGlRlGY~i~~~-~~i~~l~~~~~p~~v~~~-----a~~~~~a~~-~~~~~~~~~~~~~~~r~~l~~~L~~~g~~ 265 (332)
T PRK06425 193 KILGIPSLRIGYIATDD-YNMKISRKITEPWSVCDP-----AIDFIRSID-LDYVAKHSLDIMENERSYLINNLEAMGFR 265 (332)
T ss_pred HHHHCCCHHHEHHCCCH-HHHHHHHHCCCCCCCHHH-----HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCE
T ss_conf 87616414333310899-999999970489873899-----999999963-19999999999999999999999977797
Q ss_pred CCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 33458889812631665567679999988856718803789989999888985122466673079998999999999999
Q gi|254780349|r 314 IVSGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQ 393 (433)
Q Consensus 314 vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~ 393 (433)
++.. +...-+|+.+. ++.+..+.|.+.||.+-... .-+...+.-+||..- .++|++.+-+-+.+
T Consensus 266 ~~~~-~~aNFil~~~~----~a~~l~~~L~~~gIlVR~~~----~~~~l~~~~iRisvg-------t~~eN~~ll~aLk~ 329 (332)
T PRK06425 266 AAGD-PSANFITFMIP----DAHDFYSYLLKNGILVRLLD----DYECLGEQYIRIAIR-------RRSFNIKLVNALRN 329 (332)
T ss_pred ECCC-CCCEEEEEECC----CHHHHHHHHHHCCEEEEECC----CCCCCCCCEEEEECC-------CHHHHHHHHHHHHH
T ss_conf 8899-97048999679----99999999996991999889----989889999999789-------99999999999999
Q ss_pred HH
Q ss_conf 96
Q gi|254780349|r 394 IL 395 (433)
Q Consensus 394 ~L 395 (433)
+|
T Consensus 330 ~L 331 (332)
T PRK06425 330 FL 331 (332)
T ss_pred HH
T ss_conf 75
No 221
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=98.96 E-value=1.1e-06 Score=67.12 Aligned_cols=283 Identities=15% Similarity=0.203 Sum_probs=146.9
Q ss_pred HHHHHHHCCCCCEECCCHHHHHHHHHHHHHHH---------CC-CCEEEECCCCCCCCCCCCCCCCCCCC-CCCCCCCCC
Q ss_conf 99999871886301000016799999999831---------54-87488123344841114766543333-322013665
Q gi|254780349|r 85 IERAKKLFNVNFVNVQSHSGSQMNQGVFLALM---------HP-GDSFMGLSLDSGGHLTHGSSVNMSGK-WFKAIPYNV 153 (433)
Q Consensus 85 ~~~a~~lF~a~~anvqp~SG~~An~av~~ALl---------~p-GD~Il~~~l~~GGHlshg~~~~~~g~-~~~~~~y~~ 153 (433)
.+++.++.+.+.+ .-..||+-||.+++...- .+ ..+|++++-..=|+.. ...++++. .++.-.-+.
T Consensus 88 ~e~l~~l~~~~~v-~f~~sGseAvE~AlklAr~~~~~~~~~~~~r~~ii~~~~~yHG~t~--~~~s~t~~~~~~~~~~p~ 164 (396)
T PRK04073 88 YEKVAKLTGKDMV-LPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTM--AAVSLSSEAEYKRGFGPM 164 (396)
T ss_pred HHHHHHHCCCCEE-EECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC--CHHHCCCCCCCCCCCCCC
T ss_conf 9999975283648-9618788899999999999987623788898779997775004532--052226764334577899
Q ss_pred CCCCCCCCHHHHHHHHHHHCCC--EEEE----ECCCCCCCCC--HHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCC-CC
Q ss_conf 8323565989999999860466--7897----0552435363--7999988641797899186201244-3200012-32
Q gi|254780349|r 154 RKEDGLLDMHEIESLAIEYNPK--LIIV----GGTAYSRVWD--WERFRSIADSIGAYLMADISHISGL-VVGGQHP-SP 223 (433)
Q Consensus 154 d~~~~~ID~d~~~~~a~~~kPk--lIi~----G~S~y~~~~d--~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~-~P 223 (433)
.+....++|..++.+.+...+. -||+ |..-...|-+ ++++|++|++.|++|++|.-.+ |+ =.|..|- +-
T Consensus 165 ~~~~~~~p~~d~~~l~~~~~~~~AAvi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~fa~e~ 243 (396)
T PRK04073 165 LPGIKKIPYGDVEALKAAITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT-GLGRTGKLFACDW 243 (396)
T ss_pred CCCCEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCEE-CCCCCCCCCCEEC
T ss_conf 998232575216678861489756999989877789778998999999999998399352663410-7886576300100
Q ss_pred CCC-CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 200-23567404565225---67448983362056501664654322344556668999999997356489999999988
Q gi|254780349|r 224 VPH-CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLN 299 (433)
Q Consensus 224 l~~-ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~N 299 (433)
+.- .|+||.+ |.+.| |-+++ ++++ ++.+.++..-.-++.+|..+...||+++ .|.++. ..+.+++.+-
T Consensus 244 ~gv~PDiv~~g--K~l~gG~~P~~av-~~~~-~i~~~~~~~~h~~T~~gnpla~aaa~a~--L~~~~~--~~l~~~~~~~ 315 (396)
T PRK04073 244 DNVKPDMYILG--KALGGGVFPISCV-AANR-DILGVFTPGSHGSTFGGNPLACAVSIAA--LDVIEE--EKLPERSLEL 315 (396)
T ss_pred CCCCCCEEECC--CCCCCCCCCEEEE-ECCH-HHHHHCCCCCCCCCCCCCHHHHHHHHHH--HHHHHH--CCHHHHHHHH
T ss_conf 46898801025--3455787760589-6078-9996166899760548898999999999--999987--5799999999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCEEE-ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCC
Q ss_conf 89999998616852334588898126-31665567679999988856718803789989999888985122466673079
Q gi|254780349|r 300 SQALAKKLQFLGFDIVSGGTDNHLML-VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRG 378 (433)
Q Consensus 300 A~~La~~L~~~G~~vv~ggTd~H~vl-vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG 378 (433)
.+.|.+.|.+...+.|.+-.---+++ +++.. ......+.|.+.|+++... ...-||+- |++|
T Consensus 316 g~~l~~~L~~l~~~~i~~vRG~Gl~~giel~~---~~~~~~~~~~~~Gll~~~~----------~~~~ir~~-PpL~--- 378 (396)
T PRK04073 316 GEYFKEQLKEIDNPMIKEVRGRGLFIGVELNE---PARPYCEALKEEGLLCKET----------HETVIRFA-PPLV--- 378 (396)
T ss_pred HHHHHHHHHHCCCCCEEECCCCEEEEEEEECC---CHHHHHHHHHHCCEEEEEC----------CCCEEEEE-CCCC---
T ss_conf 99999999825899748723377999999587---5899999999499799527----------99989997-9936---
Q ss_pred CCHHHHHHHHHHHHHHHH
Q ss_conf 998999999999999960
Q gi|254780349|r 379 FKEKDFEYIGELIAQILD 396 (433)
Q Consensus 379 ~~e~em~~iA~li~~~L~ 396 (433)
+.++|++++.+.+.++|.
T Consensus 379 it~~eid~~l~~l~~~L~ 396 (396)
T PRK04073 379 ISKEELDWALEKIKAVLS 396 (396)
T ss_pred CCHHHHHHHHHHHHHHHC
T ss_conf 899999999999999859
No 222
>PTZ00125 ornithine aminotransferase; Provisional
Probab=98.94 E-value=1.2e-06 Score=66.79 Aligned_cols=290 Identities=17% Similarity=0.142 Sum_probs=148.8
Q ss_pred HHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHC---------CCC-EEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999999998718863010000167999999998315---------487-4881233448411147665433333220136
Q gi|254780349|r 82 NIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMH---------PGD-SFMGLSLDSGGHLTHGSSVNMSGKWFKAIPY 151 (433)
Q Consensus 82 ~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~---------pGD-~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y 151 (433)
.++.+++..+++.+.+= -.-||+-||.+++..--+ +|. +|+++.-..-|. |.| ..+.++.-.....|
T Consensus 94 ~~a~~~l~~~~g~~~v~-f~~SGsEA~e~AiklAr~~~~~~~~~~~~r~~ii~~~~~yHG~-t~g-a~s~~~~~~~~~~~ 170 (415)
T PTZ00125 94 GEAEKYITNLFGYDKVL-FMNTGAEANETAVKFARRWGYAVKGIPENQAKIIFCNGNFSGR-TMG-AISASDDPKSYNKF 170 (415)
T ss_pred HHHHHHHHHCCCCCEEE-ECCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCC-CCC-CCCCCCCCCCCCCC
T ss_conf 99999998554998899-5387588999999999898774167778960599973886888-445-43344574334577
Q ss_pred -CCCCCCCCCC---HHHHHHHHHHHC-CCEEEEE----CCCC--CCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHC
Q ss_conf -6583235659---899999998604-6678970----5524--353637999988641797899186201244-32000
Q gi|254780349|r 152 -NVRKEDGLLD---MHEIESLAIEYN-PKLIIVG----GTAY--SRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQ 219 (433)
Q Consensus 152 -~~d~~~~~ID---~d~~~~~a~~~k-PklIi~G----~S~y--~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~ 219 (433)
++-+....++ .+.+++..++.. ..-||+. ..-. |-+-=++++|++|++.|++|++|.-.+ |+ =.|..
T Consensus 171 ~p~~~~~~~~p~~d~~~l~~~~~~~~~iAAviiEPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~ 249 (415)
T PTZ00125 171 GPFVPGFHKVDYNDLEALEKLLSKDPNVCAFIVEPIQGEAGVIVPDEGYLKQVYSLCKKYNVLLVADEVQT-GLGRTGKL 249 (415)
T ss_pred CCCCCCEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCEE-CCCCCCCC
T ss_conf 88889707704676899999960499768999746568788426999999999999998487676452241-67756762
Q ss_pred CCCC-CCC-CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 1232-200-23567404565225---674489833620565016646543223445566689999999973564899999
Q gi|254780349|r 220 HPSP-VPH-CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAK 294 (433)
Q Consensus 220 ~~~P-l~~-ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~ 294 (433)
|..- +.- .|++|.+ |.|.| |-|+++..+ ++.+.++..-.-.+.+|..+..-||+|+ .+.++. ..+.+
T Consensus 250 fa~e~~gv~PDiv~~g--Kgl~gG~~Plsav~~~~--~i~~~~~~~~h~~T~~gnpla~Aaa~a~--L~~i~~--~~l~~ 321 (415)
T PTZ00125 250 LAVDHEGVKPDIVLLG--KALSGGHLPISAVLAND--DVMLTIKPGEHGSTYGGNPLAAAVCKEA--LEVLSE--EKLAE 321 (415)
T ss_pred CCCCCCCCCCCEEEEC--CCCCCCCCCCEEEECCH--HHHHHCCCCCCCCCCCCCHHHHHHHHHH--HHHHHH--CCHHH
T ss_conf 1201789799821003--14468877620353349--9996326899888998189999999999--999986--46999
Q ss_pred HHHHHHHHHHHHHHHC-CCCCCCCCCCCCEEE-ECCCCC-CCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9998889999998616-852334588898126-316655-6767999998885671880378998999988898512246
Q gi|254780349|r 295 QIVLNSQALAKKLQFL-GFDIVSGGTDNHLML-VDLRSK-RMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGT 371 (433)
Q Consensus 295 qvv~NA~~La~~L~~~-G~~vv~ggTd~H~vl-vdl~~~-~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT 371 (433)
++-+..+.|.+.|.+. -++.+..-.-.-+++ |++.+. .-...+....+.+.|+.+... ..+-||+.-
T Consensus 322 ~v~~~G~~l~~~L~~L~~~p~v~~VRG~Gl~~giel~~~~~~~~~~i~~~~~~~Gll~~~~----------g~~vir~~P 391 (415)
T PTZ00125 322 NAQKLGKYFRKGLKKLKKSPIVEIVRGKGLLNAIQFDPNVSNVAWDICLKFKENGLLCKPT----------HDDIIRLTP 391 (415)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHCCEEEECC----------CCCEEEEEC
T ss_conf 9999999999999987469976987007819999985797658999999999599699607----------999899989
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 66730799989999999999999602
Q gi|254780349|r 372 PSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 372 ~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
|-+ +.++|+.++-+.+.++|+.
T Consensus 392 PL~----it~~eid~~l~~l~~aL~~ 413 (415)
T PTZ00125 392 PLT----ITKEQLDQCLLIIKKVLKS 413 (415)
T ss_pred CCC----CCHHHHHHHHHHHHHHHHH
T ss_conf 933----8999999999999999996
No 223
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=98.93 E-value=5.8e-07 Score=69.02 Aligned_cols=300 Identities=17% Similarity=0.209 Sum_probs=175.1
Q ss_pred HHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC-CCEECCCHHHHHHHHHH
Q ss_conf 83888104301029899998305102886579888753360067999999999999987188-63010000167999999
Q gi|254780349|r 33 NDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNV-NFVNVQSHSGSQMNQGV 111 (433)
Q Consensus 33 ~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a-~~anvqp~SG~~An~av 111 (433)
.+-|-|=++||...+..-.... +..+|| |.. + +.+. +.+.+-++. +-.+|=+..|+..-+..
T Consensus 24 ~~ilDlSsNiNPlG~P~~~~~a-~~~~ry----Pd~----~-------~~l~-~~~a~~~g~~~~~~Vl~gnGs~elI~~ 86 (339)
T PRK06959 24 DAWLDLSTGINPHGYPVPPVPA-DAWRRL----PDD----G-------DGLA-ACAARYYGAPDAAHVLPVAGSQAAIRA 86 (339)
T ss_pred HHEEECCCCCCCCCCCCCHHHH-HHHHHC----CCC----C-------HHHH-HHHHHHCCCCCHHHEEECCCHHHHHHH
T ss_conf 8957616888989999222249-999858----998----5-------8999-999998199967709966579999999
Q ss_pred HHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCC
Q ss_conf 99831548748812334484111476654333332201366583235659899999998604667897055243--5363
Q gi|254780349|r 112 FLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWD 189 (433)
Q Consensus 112 ~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d 189 (433)
+.+++.||+.++ ..+..+.|- ..+...+.++.+++. +.+. .....++|++.....| ..++
T Consensus 87 l~~~l~~~~v~i-~~ptfseY~-----~a~~~~G~~v~~~~~-------~~~~-----l~~~~~~v~l~nPNNPTG~~~~ 148 (339)
T PRK06959 87 LPALLPRGRVGI-AALAYSEYA-----PAFARHGHRVVPLDI-------AADT-----LPATLTHAIVVNPNNPTAERLP 148 (339)
T ss_pred HHHHHCCCCEEE-ECCCHHHHH-----HHHHHCCCEEEECCC-------CHHH-----CCCCCCEEEEECCCCCCCCCCC
T ss_conf 999828886899-452036778-----999982985551373-------3433-----7356898998058071038889
Q ss_pred HHHHHHHH---HHCCCEEEECCCCHHHHHHHHCCCCCCCCCC-EEEECCCCC--CCCCCCEEEEECCCCHHHHCCHHHCH
Q ss_conf 79999886---4179789918620124432000123220023-567404565--22567448983362056501664654
Q gi|254780349|r 190 WERFRSIA---DSIGAYLMADISHISGLVVGGQHPSPVPHCH-IVTTTTHKS--LRGPRGGLIMTNHADLAKKINSAIFP 263 (433)
Q Consensus 190 ~~~l~eIa---~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~AD-vvt~sTHKt--l~GPrgGiI~~~~~e~~~~i~~avfP 263 (433)
-+.+.+++ .+.+.+|++|.|-+ -+........-.++-+ +|.-|.-|. |+|-|=|..+.+ +++.+++++..-|
T Consensus 149 ~~~l~~~~~~~~~~~~~lvvDEAy~-df~~~~s~~~~~~~~nlivlRS~sK~~gLaGlRlGy~~a~-~~~i~~l~~~~~p 226 (339)
T PRK06959 149 AARLLRWHAQLAARGGTLIVDEAFA-DTGAHASLAAHTHRPGLVVLRSVGKFFGLAGVRAGFVLAA-PALLAALRDALGA 226 (339)
T ss_pred HHHHHHHHHHCCCCCCEEEEEHHHH-HHCCCHHHHHHCCCCCEEEEEECCHHHCCCCCCEEEEECC-HHHHHHHHHHCCC
T ss_conf 9999999985541388899973444-5266545576416999899841567645876463644379-9999999953899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHH
Q ss_conf 32234455666899999999735648-99999999888999999861685233458889812631665567679999988
Q gi|254780349|r 264 GLQGGPFMHSIAAKAVAFGEALSSEF-RDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAESIL 342 (433)
Q Consensus 264 g~qg~~~~~~iaa~aval~Ea~~~~f-~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~L 342 (433)
--++++ .+.++ ..+|. ...| ...-.++..-...|.+.|...||.+. +|.+ .+++.. + ++....+.|
T Consensus 227 w~v~~~--a~~a~-~aal~---d~~~~~~~~~~l~~~r~~L~~~L~~~g~~~~--~~~l-F~~~~~---~-~a~~~~~~L 293 (339)
T PRK06959 227 WTVSGP--ARHAV-RAAFA---DRAWQAAMRERLAADGARLAALLRAHGFAVH--ATPL-FSWTDD---P-RAAALHAAL 293 (339)
T ss_pred CCCCHH--HHHHH-HHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCEE-EEEECC---C-CHHHHHHHH
T ss_conf 897799--99999-99963---9999999999999999999999997799866--7205-898468---8-999999999
Q ss_pred HHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 8567188037899899998889851224666730799989999999999999602
Q gi|254780349|r 343 GRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 343 e~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
.+.||.|-. ++ .+.+||||.|. .|.|+..+.+-+.++|..
T Consensus 294 ~~~GIlVR~----f~-----~p~~LRi~vp~------~e~e~~RL~~AL~e~l~~ 333 (339)
T PRK06959 294 AARGIWTRY----FA-----APPSVRIGLPA------DEAEWQRLEDALAECVPT 333 (339)
T ss_pred HHCCEEEEE----CC-----CCCCEEEECCC------CHHHHHHHHHHHHHHHHH
T ss_conf 849929958----89-----99988986789------999999999999999998
No 224
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=98.93 E-value=2e-06 Score=65.34 Aligned_cols=295 Identities=16% Similarity=0.168 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHCCCCCEE-CCC-HHHHHHHHHHHHHHH--CCCCEEEECCCCCCCCCCCCCCCCCCCC------------
Q ss_conf 999999999871886301-000-016799999999831--5487488123344841114766543333------------
Q gi|254780349|r 81 ENIAIERAKKLFNVNFVN-VQS-HSGSQMNQGVFLALM--HPGDSFMGLSLDSGGHLTHGSSVNMSGK------------ 144 (433)
Q Consensus 81 E~la~~~a~~lF~a~~an-vqp-~SG~~An~av~~ALl--~pGD~Il~~~l~~GGHlshg~~~~~~g~------------ 144 (433)
++||. +..+++.-++.+ |.. .||+-||.+++...- .-..+|+++.-..=|. |.| ..++++.
T Consensus 91 ~~la~-~L~~~~p~~~~~~v~f~~SGsEAvE~AlKlAr~~tgr~~ii~~~~~yHG~-T~g-a~s~sg~~~~~~~~~~p~~ 167 (448)
T PRK08593 91 VRLAK-KLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGS-TYG-SLSMSAISLNMRKKYGPLL 167 (448)
T ss_pred HHHHH-HHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC-CCC-CHHCCCCCCCCCCCCCCCC
T ss_conf 99999-99985786766379971875789999999997548998799994787768-734-0010478756544568999
Q ss_pred -CCCCCCCCC--CCCCCCCC-------HHHHHHHHHHH----CCCEEEEE----C-CCC-CCCCCHHHHHHHHHHCCCEE
Q ss_conf -322013665--83235659-------89999999860----46678970----5-524-35363799998864179789
Q gi|254780349|r 145 -WFKAIPYNV--RKEDGLLD-------MHEIESLAIEY----NPKLIIVG----G-TAY-SRVWDWERFRSIADSIGAYL 204 (433)
Q Consensus 145 -~~~~~~y~~--d~~~~~ID-------~d~~~~~a~~~----kPklIi~G----~-S~y-~~~~d~~~l~eIa~~~ga~l 204 (433)
.+..+||+- +.....-+ .+.+++.++.+ +..-||+. . -.+ +-+-=++++|++||++|++|
T Consensus 168 p~~~~vp~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvi~EPvqg~gG~~~~p~~yl~~lr~lc~~~gill 247 (448)
T PRK08593 168 PGFYHIPFPDKYRGMYEEPQANSVEEYLAPLKEMFEKYVPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILF 247 (448)
T ss_pred CCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEE
T ss_conf 99578079863345457870679999999999999851788976999997887888987388788689999998668069
Q ss_pred EECCCCHHHH-HHHHCCC-CCCCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHH
Q ss_conf 9186201244-3200012-32200-23567404565225--674489833620565016646543223445566689999
Q gi|254780349|r 205 MADISHISGL-VVGGQHP-SPVPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAV 279 (433)
Q Consensus 205 ~~D~aH~~GL-Ia~g~~~-~Pl~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~av 279 (433)
++|.-. .|+ =.|..|- +-+.- .|++|.+ |.|.| |=++++ +++ ++.+.++....-.+.+|..+...||+|+
T Consensus 248 I~DEV~-tGfGRtG~~fa~e~~gv~PDiv~~g--Kgl~gG~Plsav~-~~~-ei~~~~~~~~h~~T~~Gnpla~aaa~a~ 322 (448)
T PRK08593 248 AVDDIQ-QGLGRTGKWSSISHFNITPDLMTFG--KSLAGGMPMSAIV-GRK-EIMESLEAPAHLFTTGANPVSCEAALAT 322 (448)
T ss_pred EEEEEE-CCCCCCCCCHHHHHCCCCCCEEEEC--CCCCCCCCEEEEE-ECH-HHHHHCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 874300-1777567603554305288867773--0025887407998-758-9885217886565789998999999999
Q ss_pred HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCEEE-ECC---CCCC-CC---HHHHHHHHHHCCEEE
Q ss_conf 9999735648999999998889999998616--852334588898126-316---6556-76---799999888567188
Q gi|254780349|r 280 AFGEALSSEFRDYAKQIVLNSQALAKKLQFL--GFDIVSGGTDNHLML-VDL---RSKR-MT---GKRAESILGRVSITC 349 (433)
Q Consensus 280 al~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~--G~~vv~ggTd~H~vl-vdl---~~~~-~~---G~~a~~~Le~~gI~~ 349 (433)
.+.++. ..+.+++-+..+.|.+.|.+. .++.|..-.-.-+++ |++ +..+ -+ ..+..+.|-+.|+++
T Consensus 323 --L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~p~v~dVRG~GL~~giElv~~~~~~~~~~~~~~~v~~~~~~~Gll~ 398 (448)
T PRK08593 323 --IDMIED--ESLLQASAEKGEYVRKRFDQWVSKYNFVGDVRGKGLSIGIDIVSDKKLKTRDAEAALKICNYCFEHGVVI 398 (448)
T ss_pred --HHHHHH--CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEE
T ss_conf --999974--4399999999999999999998629978873025517899996455557888899999999999789089
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 0378998999988898512246667307999899999999999996025776
Q gi|254780349|r 350 NKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDGSSSD 401 (433)
Q Consensus 350 Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~~~~~ 401 (433)
... .++-||+ +|.++ +.++|++++.+.+.++|......
T Consensus 399 ~~~----------~gn~ir~-~PpL~---it~~eid~~~~~l~~al~~l~ag 436 (448)
T PRK08593 399 IAV----------AGNVLRF-QPPLV---ITYEQLDTALNTIEDALTALEAG 436 (448)
T ss_pred EEC----------CCCEEEE-ECCCC---CCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 867----------9998999-78900---88999999999999999998748
No 225
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=98.93 E-value=2.5e-06 Score=64.56 Aligned_cols=271 Identities=17% Similarity=0.200 Sum_probs=139.9
Q ss_pred CHHHHHHHHHHHHHHH-----CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCC---CCCHHHHHHHHHH
Q ss_conf 0016799999999831-----54874881233448411147665433333220136-6583235---6598999999986
Q gi|254780349|r 101 SHSGSQMNQGVFLALM-----HPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPY-NVRKEDG---LLDMHEIESLAIE 171 (433)
Q Consensus 101 p~SG~~An~av~~ALl-----~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y-~~d~~~~---~ID~d~~~~~a~~ 171 (433)
.-|||-||-+++.--- .-..+|+++.-..=|. |.| ..++++......+| +.-+.-. .=|.+.+++.+.+
T Consensus 156 ~nSGSEAvE~AiKlAr~y~~~~Gr~~IIs~~~sYHG~-T~g-alS~tg~~~~~~~f~pl~p~~~~vp~~d~~~~~~~~~~ 233 (468)
T PRK11522 156 CNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGK-SLG-ALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSE 233 (468)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC-CCH-HHEECCCHHCCCCCCCCCCCCEECCCCCHHHHHHHHHH
T ss_conf 7972899999999999977740991899971786776-422-20312762102577789998456378999999999998
Q ss_pred -----HCCCEEEEE------CCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCC-CCCCC-CCEEEECCCCC
Q ss_conf -----046678970------5524353637999988641797899186201244-3200012-32200-23567404565
Q gi|254780349|r 172 -----YNPKLIIVG------GTAYSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHP-SPVPH-CHIVTTTTHKS 237 (433)
Q Consensus 172 -----~kPklIi~G------~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~-~Pl~~-ADvvt~sTHKt 237 (433)
.+..-||+. +-..|-+-=++++|+|||++|++|++|.-++ |+ -.|..|- +.+.- .|+||. -|.
T Consensus 234 ~~~~~~~vAAvIvEPIqG~gGv~~pp~~yl~~lr~lc~~~giLLI~DEVqT-GfGRTG~~fa~e~~gV~PDivt~--aKg 310 (468)
T PRK11522 234 CKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQT-GMGRTGKMFACEHENVQPDILCL--AKA 310 (468)
T ss_pred HHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCC-CCCCCCCCCEEECCCCCCCEEEE--CCC
T ss_conf 651489689999977767789826998999999998753807882264122-78865785145236789888996--155
Q ss_pred CCC---CCCEEEEECCCCHHHHCCHHHCHHHH----HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 225---67448983362056501664654322----34455666899999999735648999999998889999998616
Q gi|254780349|r 238 LRG---PRGGLIMTNHADLAKKINSAIFPGLQ----GGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL 310 (433)
Q Consensus 238 l~G---PrgGiI~~~~~e~~~~i~~avfPg~q----g~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~ 310 (433)
|.| |=|+++.+ + ++++.+-.. |+.. +|..+.+-||+++ .+.+.. .....++-+....|.+.|.+.
T Consensus 311 LggG~~Pigav~~~-~-~i~~~~~~~--~~~hg~Tf~GnPlacAaala~--L~ii~~--e~l~~~a~~~G~~L~~~L~~l 382 (468)
T PRK11522 311 LGGGVMPIGATIAT-E-EVFSVLFDN--PFLHTTTFGGNPLACAAALAT--INVLLE--QNLPAQAEQKGDMLLDGFRQL 382 (468)
T ss_pred CCCCCCCEEEEEEC-H-HHHHHHHHC--CCCCCCCCCCCHHHHHHHHHH--HHHHHH--CCHHHHHHHHHHHHHHHHHHH
T ss_conf 55787750589762-9-999998517--774466767997999999999--999986--459999999999999999999
Q ss_pred --CCC-CCCCCCCCCEEE-ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHH
Q ss_conf --852-334588898126-3166556767999998885671880378998999988898512246667307999899999
Q gi|254780349|r 311 --GFD-IVSGGTDNHLML-VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEY 386 (433)
Q Consensus 311 --G~~-vv~ggTd~H~vl-vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~ 386 (433)
.++ ++..-----+++ +++.+.. .+..+.+.|-+.|+.++.... .++-|||.-|-+. .++|+++
T Consensus 383 ~~~~p~~i~dVRG~GLm~giel~~~~-~~~~v~~~~~~~Gvlv~~~~~--------~~~~lr~~PPL~I----t~eeid~ 449 (468)
T PRK11522 383 AREYPDLVQEARGKGMLMAIEFVDNE-IGYNFASEMFRQRVLVAGTLN--------NAKTIRIEPPLTL----TIEQCEQ 449 (468)
T ss_pred HHHCCCCEEEEEECCEEEEEEECCCC-HHHHHHHHHHHCCEEEEECCC--------CCCEEEEECCCCC----CHHHHHH
T ss_conf 87686711251003169999957850-089999999978919987489--------9988999599657----9999999
Q ss_pred HHHHHHHHHHC
Q ss_conf 99999999602
Q gi|254780349|r 387 IGELIAQILDG 397 (433)
Q Consensus 387 iA~li~~~L~~ 397 (433)
+-+.+.++|..
T Consensus 450 ~l~~l~~aL~~ 460 (468)
T PRK11522 450 VIKAARKALAA 460 (468)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999999
No 226
>KOG2040 consensus
Probab=98.92 E-value=3.6e-07 Score=70.44 Aligned_cols=264 Identities=19% Similarity=0.234 Sum_probs=173.8
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHH---HHHHHHHH-CCCC---EEEECCCCCCCCCCCC-CCCCCCCCC
Q ss_conf 06799999999999998718863010000167999---99999831-5487---4881233448411147-665433333
Q gi|254780349|r 74 CQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMN---QGVFLALM-HPGD---SFMGLSLDSGGHLTHG-SSVNMSGKW 145 (433)
Q Consensus 74 ~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An---~av~~ALl-~pGD---~Il~~~l~~GGHlshg-~~~~~~g~~ 145 (433)
.-|-.-+++| .+-.|++-|-+-+-.||-||.+.- +.|.-+.+ ..|+ .|-..+... || .+.+...-+
T Consensus 578 qGY~~lf~~L-e~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSA-----HGTNPASA~Mag 651 (1001)
T KOG2040 578 QGYQQLFTEL-EKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSA-----HGTNPASAAMAG 651 (1001)
T ss_pred HHHHHHHHHH-HHHHHEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECC-----CCCCHHHHHHCC
T ss_conf 6499999999-8777632066613426898755311229999999985477765168986024-----689846688649
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEE---EEECCCC-CCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCC
Q ss_conf 22013665832356598999999986046678---9705524-3536379999886417978991862012443200012
Q gi|254780349|r 146 FKAIPYNVRKEDGLLDMHEIESLAIEYNPKLI---IVGGTAY-SRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHP 221 (433)
Q Consensus 146 ~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklI---i~G~S~y-~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~ 221 (433)
+.+++.+.|. +|.||+..+...+++++-+|- |--.|.+ .|.-+++.+.+|.++.|.-+..|.|..---| |+ -
T Consensus 652 mkvvpV~~~~-~G~id~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqV--Gl-c 727 (1001)
T KOG2040 652 MKVVPVGCDA-NGNIDMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQV--GL-C 727 (1001)
T ss_pred CEEEEEECCC-CCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCEE--CC-C
T ss_conf 8688863157-887459999999997465220467854664566554589999999863987885377752302--53-5
Q ss_pred CCCCC-CCEEEECCCCCCCCCCC------EEEEECCCCHHHHCCH-HH-CHH---------HHHHH--HHHHHHHHHHHH
Q ss_conf 32200-23567404565225674------4898336205650166-46-543---------22344--556668999999
Q gi|254780349|r 222 SPVPH-CHIVTTTTHKSLRGPRG------GLIMTNHADLAKKINS-AI-FPG---------LQGGP--FMHSIAAKAVAF 281 (433)
Q Consensus 222 ~Pl~~-ADvvt~sTHKtl~GPrg------GiI~~~~~e~~~~i~~-av-fPg---------~qg~~--~~~~iaa~aval 281 (433)
+|=++ |||---..||||.=|+| |=|-.++ .++--+-+ -| -|+ .+++. -...|..+..+.
T Consensus 728 ~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~-HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaY 806 (1001)
T KOG2040 728 RPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAY 806 (1001)
T ss_pred CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHH-HCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEHHHHHH
T ss_conf 776566531000134035505789888877520665-4355379997457777778887660412677762220337999
Q ss_pred HHHHCHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCC---CCCCCCEEEECCCCC----CCCHHHHHHHHHHCCEEE
Q ss_conf 99735648-999999998889999998616852334---588898126316655----676799999888567188
Q gi|254780349|r 282 GEALSSEF-RDYAKQIVLNSQALAKKLQFLGFDIVS---GGTDNHLMLVDLRSK----RMTGKRAESILGRVSITC 349 (433)
Q Consensus 282 ~Ea~~~~f-~~Ya~qvv~NA~~La~~L~~~G~~vv~---ggTd~H~vlvdl~~~----~~~G~~a~~~Le~~gI~~ 349 (433)
..++-..+ ++-.+--+-||+.|++.|... |+++. .++--|-+.+|+|++ |+...+++++|-..|.-.
T Consensus 807 ikmMG~~GL~~as~~AiLNaNYMakRLe~h-Ykil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHa 881 (1001)
T KOG2040 807 IKMMGSGGLKDASKIAILNANYMAKRLESH-YKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHA 881 (1001)
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHC-CCEEEECCCCCEEEEEEEECHHHCCCCCCCHHHHHHHHHHCCCCC
T ss_conf 998643564335688865127899988640-521475577643200011134220026974888999887526778
No 227
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase; InterPro: IPR013375 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology . The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric . Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices , and are mostly dimeric or multimeric, containing at least three conserved regions , , . However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases; these synthetases are further divided into three subclasses, a, b and c, according to sequence homology. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases . Many archaeal species lack cysteinyl-tRNA synthetase, an essential enzyme that provides Cys-tRNA(Cys) in other organisms. Instead, in a two step pathway, tRNA-Cys is acylated with O-phosphoserine (Sep) to form Sep-tRNA(Cys), which is subsequently converted to Cys-tRNA(Cys) . This pathway is also thought to function as the sole route of cysteine biosynthesis in these organisms. Several other archaeal species use both this pathway and direct tRNA(Cys) aminoacylation to synthesize Cys-tRNA(Cys), but this pathway appears to be the only route for cysteine biosynthesis. Proteins in this entry catalyse the second step in this pathway using pyridoxal phosphate and a sulphur donor to synthesize Cys from Sep while attached to the tRNA..
Probab=98.91 E-value=4.6e-08 Score=76.64 Aligned_cols=329 Identities=17% Similarity=0.264 Sum_probs=214.7
Q ss_pred HHHCCCCCCCC--CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH----H-HHHHCCCCCEECCCHHH
Q ss_conf 98388810430--10298999983051028865798887533600679999999999----9-99871886301000016
Q gi|254780349|r 32 QNDEIQLIASE--NIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIE----R-AKKLFNVNFVNVQSHSG 104 (433)
Q Consensus 32 q~~~l~LiASE--N~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~----~-a~~lF~a~~anvqp~SG 104 (433)
.++.|||-|=- -++++++++|| -.|..=||= =-|=.| ..|+|+.=+|+ - .-+..|++- ||+..|
T Consensus 5 ~r~~iN~nPlQrGGvLt~~ArkAl-~EfGDGYSV----CDfC~G--~Ld~v~~PpI~~F~~daLA~FlG~D~--~R~t~G 75 (381)
T TIGR02539 5 EREFINLNPLQRGGVLTEAARKAL-VEFGDGYSV----CDFCEG--RLDEVTKPPIKDFLEDALAEFLGMDV--VRVTHG 75 (381)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHE-EEECCCCEE----EECCCC--EECCCCCCCHHHHHHHHHHHHHCCCE--EECCCC
T ss_conf 121316784346887837787100-422685238----530387--70352588310004554266727974--540677
Q ss_pred HH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH------CCCEE
Q ss_conf 79-999999983154874881233448411147665433333220136658323565989999999860------46678
Q gi|254780349|r 105 SQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEY------NPKLI 177 (433)
Q Consensus 105 ~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~------kPklI 177 (433)
.= +..+|+.||.++||.|..=.+ -|+|-=-.+--.|.....+||....-++.||.|+-.+.+++. .|+|+
T Consensus 76 ARe~KfaVMhalC~~GD~vV~D~~---AHYtsyvAAEragl~v~eVPy~~g~P~Y~v~~e~Y~~viee~~d~~G~~~~La 152 (381)
T TIGR02539 76 AREGKFAVMHALCKEGDVVVLDGL---AHYTSYVAAERAGLNVKEVPYETGHPEYKVDPEGYKEVIEEVEDESGKPVALA 152 (381)
T ss_pred CCHHHHHHHHHHCCCCCEEEECCC---CCHHHHHHHHHCCCEEEECCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCEEE
T ss_conf 502457887640899898998587---45445899975497278816558886076416678888865520279883489
Q ss_pred EEEC--CCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCCC--CCCCEEEEECCC
Q ss_conf 9705--524353637999988641797899186201244320001232200--2356740456522--567448983362
Q gi|254780349|r 178 IVGG--TAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSLR--GPRGGLIMTNHA 251 (433)
Q Consensus 178 i~G~--S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl~--GPrgGiI~~~~~ 251 (433)
++-. +.|.-.-|=+++.+||++.|--++-.+|-++| .+|=-.++ ||+|.+|-||+.. ||=| ++-.+ +
T Consensus 153 llThvDG~YGNL~DA~kva~vc~~~gvPlLLNCAY~vG-----RmPv~~ke~~~DFiVGSGHKSMAASaP~G-vLa~~-e 225 (381)
T TIGR02539 153 LLTHVDGEYGNLADAKKVAKVCREKGVPLLLNCAYTVG-----RMPVSAKEIKADFIVGSGHKSMAASAPCG-VLAMS-E 225 (381)
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCCCEEE-----EECCCCCCCCCCEEEECCCCHHHHCCCEE-ECCCC-C
T ss_conf 98402688675112456876654207862212450521-----00315777787677806851322126600-21454-2
Q ss_pred CHHHHCCH-HHCHHHHHHH-HHH--------HHHHHHHHHHHHHCHHHHHH---HHHHHHHHHHHHHHHHHCC-CCCCCC
Q ss_conf 05650166-4654322344-556--------66899999999735648999---9999988899999986168-523345
Q gi|254780349|r 252 DLAKKINS-AIFPGLQGGP-FMH--------SIAAKAVAFGEALSSEFRDY---AKQIVLNSQALAKKLQFLG-FDIVSG 317 (433)
Q Consensus 252 e~~~~i~~-avfPg~qg~~-~~~--------~iaa~aval~Ea~~~~f~~Y---a~qvv~NA~~La~~L~~~G-~~vv~g 317 (433)
||+++|=+ +-.-|-++|- +.+ +.-+.-+.-..|.-|+-.+- =.|=|+|+|.|.++|.+-| |.=++-
T Consensus 226 E~~~~v~r~SslrGdvsG~~~~~KEvElLGCT~rGap~~TlmASfP~VveRV~~Wd~Ev~ktRy~v~eLE~igG~~QlG~ 305 (381)
T TIGR02539 226 EWEDKVLRKSSLRGDVSGRKFPVKEVELLGCTSRGAPIVTLMASFPHVVERVKRWDEEVKKTRYFVAELEDIGGFKQLGV 305 (381)
T ss_pred CCCCCHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCC
T ss_conf 22340110232100336634474127744863240479999732810112202315667776578887642178886486
Q ss_pred CCCCCEEEECCCCCCC---------CHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHH---HHHCCCCHHHHH
Q ss_conf 8889812631665567---------6799999888567188037899899998889851224666---730799989999
Q gi|254780349|r 318 GTDNHLMLVDLRSKRM---------TGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPS---GTTRGFKEKDFE 385 (433)
Q Consensus 318 gTd~H~vlvdl~~~~~---------~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~a---iTtrG~~e~em~ 385 (433)
.=..|=++- +-.-++ -|.-..+-|-+=|| .|||=|... +.+.||+++.+.
T Consensus 306 kPk~HDLv~-FEtPgf~Eia~~~kr~GyFLY~ELKkRgi-----------------~GI~~G~Tk~~K~SvYGL~~Eqv~ 367 (381)
T TIGR02539 306 KPKEHDLVK-FETPGFHEIAKKHKRRGYFLYEELKKRGI-----------------VGIRSGQTKEIKLSVYGLTKEQVE 367 (381)
T ss_pred CCCCCCCEE-ECCCCCHHHHCCCCCCCCCHHHHHHHCCC-----------------EECCCCCCEEEEEEEECCCCCHHH
T ss_conf 888256414-44884013414487977640566531583-----------------001788742776433127521144
Q ss_pred HHHHHHHHHHHC
Q ss_conf 999999999602
Q gi|254780349|r 386 YIGELIAQILDG 397 (433)
Q Consensus 386 ~iA~li~~~L~~ 397 (433)
-|++=|.++++.
T Consensus 368 ~Vv~sf~eI~e~ 379 (381)
T TIGR02539 368 YVVDSFKEIVEE 379 (381)
T ss_pred HHHHHHHHHHHH
T ss_conf 446789999985
No 228
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=98.90 E-value=1.9e-06 Score=65.46 Aligned_cols=345 Identities=14% Similarity=0.128 Sum_probs=169.8
Q ss_pred HHHHHHH--HHHHHHHCCCCCCCCCC----CCHHHHHHHHCCCCCCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999--99999838881043010----2989999830510288657988875--33600679999999999999871
Q gi|254780349|r 21 VFSLIGQ--ESCRQNDEIQLIASENI----VSRAVLEAQGSILTNKYAEGYPSKR--YYGGCQYVDDIENIAIERAKKLF 92 (433)
Q Consensus 21 i~~~i~~--e~~rq~~~l~LiASEN~----~S~~v~~~l~S~l~nkyaeG~pg~r--yy~G~~~~d~iE~la~~~a~~lF 92 (433)
|..++++ ....+-+.|+|=..+=- +...++++....+.+- ..+.. -|+-.+-..++-+...++.++-+
T Consensus 16 ~~~~~~~~~~~~~~P~vIsl~~G~P~~~p~~~~~~~~a~~~~l~~~----~~~~~~~qY~~~~G~~eLReaIA~~~~~~~ 91 (416)
T PRK09440 16 ITQLMDDLNDGLRTPGAIMLGGGNPAHIPEMEDYFRDLLAELLASG----KLTEALGNYDGPQGKDELIEALAALLNERY 91 (416)
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 9999999999738998488179689888982299999999998468----666544788999870999999999999984
Q ss_pred CC--CCEECCCHHHHH-HHHHHHHHHHCCCCE-----EEEC-CCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCC---C
Q ss_conf 88--630100001679-999999983154874-----8812-3344841114766543333322013--6658323---5
Q gi|254780349|r 93 NV--NFVNVQSHSGSQ-MNQGVFLALMHPGDS-----FMGL-SLDSGGHLTHGSSVNMSGKWFKAIP--YNVRKED---G 158 (433)
Q Consensus 93 ~a--~~anvqp~SG~~-An~av~~ALl~pGD~-----Il~~-~l~~GGHlshg~~~~~~g~~~~~~~--y~~d~~~---~ 158 (433)
|. +.-||-..+|++ |...++.+|+.|||. |+.+ +...=|+.. . ...+..+..+. ...++++ .
T Consensus 92 g~~~~pd~I~vT~Gaqqal~l~~~~l~~pgd~~~~~~vl~p~~P~Y~~Y~~---~-~l~~~~~~~~~p~i~~~~~~~~~~ 167 (416)
T PRK09440 92 GWNISPENIALTNGSQSAFFYLFNLFAGRRADGSLKKILLPLAPEYIGYAD---A-GLEEDLFVSARPNIELLPEGQFKY 167 (416)
T ss_pred CCCCCHHHEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHH---H-HHHHCCCEECCCEEEECCCCCCCC
T ss_conf 899983009984878999999999964767887764389726986544477---7-750065000056057668756567
Q ss_pred CCCHHHHHHHHHHHCCCEEEEECCCCC--C---CCCHHHHHHHHHHCCCEEEECCCCHH---HHHHHHCCCCCCCCC-C-
Q ss_conf 659899999998604667897055243--5---36379999886417978991862012---443200012322002-3-
Q gi|254780349|r 159 LLDMHEIESLAIEYNPKLIIVGGTAYS--R---VWDWERFRSIADSIGAYLMADISHIS---GLVVGGQHPSPVPHC-H- 228 (433)
Q Consensus 159 ~ID~d~~~~~a~~~kPklIi~G~S~y~--~---~~d~~~l~eIa~~~ga~l~~D~aH~~---GLIa~g~~~~Pl~~A-D- 228 (433)
.+|.++++ ...|.|+|++-....| . .-..+++.++|.+++.+++.|...-. ++..... .|. +. .
T Consensus 168 ~~d~~~l~---~~~~t~~ii~~~P~NPTG~v~s~e~~~~l~~la~~~~i~iI~De~Y~~~~~~~~~~~~--~~~-~~~~v 241 (416)
T PRK09440 168 HVDFEHLD---IDEETGAICVSRPTNPTGNVITDEELAKLDALARQHNIPLIIDNAYGPPFPGIIFSEA--TPL-WNPNI 241 (416)
T ss_pred CCCHHHHH---CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCC--CCC-CCCCE
T ss_conf 88989971---7778439997789899887788999999999999879589997898777876331556--766-78988
Q ss_pred EEEECCCCCC-CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-----HHHHH
Q ss_conf 5674045652-25674489833620565016646543223445566689999999973564899999999-----88899
Q gi|254780349|r 229 IVTTTTHKSL-RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIV-----LNSQA 302 (433)
Q Consensus 229 vvt~sTHKtl-~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv-----~NA~~ 302 (433)
|+.+|.-|++ +|=|=|.+..++ ++.+++.+.---...+.+.+.+.++. .++. ...+.....+++ +..+.
T Consensus 242 I~~~SfSK~~~pG~RiG~~vap~-~~i~~l~~~~~~~~~~~~~~~Q~~a~-~~l~---~~~~~~~~~~~~r~~y~~rr~~ 316 (416)
T PRK09440 242 ILCMSLSKLGLPGVRCGIVIANE-EIIEALTNMNGIISLAPGRLGPAIAA-ELIE---SGDLLRLSETVIRPFYRQKVQL 316 (416)
T ss_pred EEECCCCCCCCCCCCEEEEECCH-HHHHHHHHHHHHHCCCCCHHHHHHHH-HHHH---CCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99745112028654258996899-99999999997634885699999999-9997---7968999999999999999999
Q ss_pred HHHHHH----HCCCCCC-CCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCC-----CCC--CCCCCCCC
Q ss_conf 999986----1685233-45888981263166556767999998885671880378998999-----988--89851224
Q gi|254780349|r 303 LAKKLQ----FLGFDIV-SGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPE-----SPF--ITSGIRLG 370 (433)
Q Consensus 303 La~~L~----~~G~~vv-~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~-----~~~--~~sGiRlG 370 (433)
|.+.|. ..++.+. ..| .=.+|+++...+++..+..+.|++.|+.+. ||..= ... ..+.|||.
T Consensus 317 ~~~~L~~~l~~~~~~~~~P~G--gff~wv~~p~~~~~~~~l~~~l~e~gV~vv----PG~~F~~g~~~~~~~~~~~lRls 390 (416)
T PRK09440 317 AIALLRRALPDLPCLIHKPEG--AIFLWLWFKDLPITTEELYQRLKARGVLIV----PGHYFFPGLDEPWPHTHQCIRMS 390 (416)
T ss_pred HHHHHHHHCCCCCEEEECCCC--CEEEEEECCCCCCCHHHHHHHHHHCCEEEE----ECHHHCCCCCCCCCCCCCEEEEE
T ss_conf 999999857898148857982--469999889999899999999997997998----26431799987655778869998
Q ss_pred CHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 66673079998999999999999960
Q gi|254780349|r 371 TPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 371 T~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
-. -.++++++=.+.++++|+
T Consensus 391 fa------~~~e~i~egi~RLa~~i~ 410 (416)
T PRK09440 391 YV------QDDEEIEKGIAILAEEVE 410 (416)
T ss_pred EC------CCHHHHHHHHHHHHHHHH
T ss_conf 27------999999999999999999
No 229
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=98.88 E-value=1.8e-06 Score=65.59 Aligned_cols=282 Identities=18% Similarity=0.158 Sum_probs=167.5
Q ss_pred HHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHH
Q ss_conf 99838881043010298999983051028865798887533600679999999999999871886301000016799999
Q gi|254780349|r 31 RQNDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQG 110 (433)
Q Consensus 31 rq~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~a 110 (433)
...+-|-+=+++|...|.+....... -.+|-+ . + +.+ .+.+.+.+|.+ +|-+..|+..-.-
T Consensus 18 ~~~~iiDfSsNiNP~g~P~~~~~~~~-~~ryP~----~--~------~~L----~~a~a~~~g~~--~vl~gnGs~e~I~ 78 (330)
T PRK05664 18 PLADWLDLSTGIAPWPWPVPPIPADA-WARLPE----T--D------DGL----EAAARAYYGAP--QLLPVAGSQAAIQ 78 (330)
T ss_pred CHHHEEECCCCCCCCCCCHHHHHHHH-HHHCCC----C--C------HHH----HHHHHHHCCCC--CEEEECCHHHHHH
T ss_conf 99991553788899999868888999-987799----9--6------899----99999871997--3999416999999
Q ss_pred HHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCC
Q ss_conf 999831548748812334484111476654333332201366583235659899999998604667897055243--536
Q gi|254780349|r 111 VFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVW 188 (433)
Q Consensus 111 v~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~ 188 (433)
.+.- +.++++++.+....+.+- .. +.....+.. .+|.+.+..... +.++|++.....| ..+
T Consensus 79 ll~~-l~~~~~v~i~~PtfseY~---~a--~~~~g~~v~---------~~~~~~~~~~~~--~~d~v~l~nPNNPTG~~~ 141 (330)
T PRK05664 79 ALPR-LRAPGRVGVLSPCYAEHA---HA--WRRAGHQVR---------ELDEAEVEAALD--SLDVLVVVNPNNPTGRRF 141 (330)
T ss_pred HHHH-HHCCCEEEECCCCHHHHH---HH--HHHCCCEEE---------ECCHHHHHHCCC--CCCEEEECCCCCCCCCCC
T ss_conf 9999-748994688488879999---99--998699889---------768777762267--889899827928866898
Q ss_pred CHHHHHHH---HHHCCCEEEECCCCHHHHHHHHCCCCCCCCCC-EEEECCCCC--CCCCCCEEEEECCCCHHHHCCHHHC
Q ss_conf 37999988---64179789918620124432000123220023-567404565--2256744898336205650166465
Q gi|254780349|r 189 DWERFRSI---ADSIGAYLMADISHISGLVVGGQHPSPVPHCH-IVTTTTHKS--LRGPRGGLIMTNHADLAKKINSAIF 262 (433)
Q Consensus 189 d~~~l~eI---a~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~AD-vvt~sTHKt--l~GPrgGiI~~~~~e~~~~i~~avf 262 (433)
+-+++.++ +.+.+++|++|.|- +...-.....+..++-. ||.-|.-|. |+|-|=|.++.+ +++.+++.+..-
T Consensus 142 ~~~~l~~~~~~~~~~~~~lvvDEay-~d~~~~~s~~~~~~~~nlivlrS~sK~~glaGlRlGy~~a~-~~~i~~l~~~~~ 219 (330)
T PRK05664 142 DPARLLAWHARLAARGGWLVVDEAF-MDNTPQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAE-PALLRALAELLG 219 (330)
T ss_pred CHHHHHHHHHHHHHCCCEEEEECHH-HCCCCCHHHHHHCCCCCEEEEEECCHHHCCCCCCCEEHCCC-HHHHHHHHHHCC
T ss_conf 9999999999865319889997532-11687311466335899899840447426854030201089-999999998449
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHH
Q ss_conf 43223445566689999999973564899999999888999999861685233458889812631665567679999988
Q gi|254780349|r 263 PGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAESIL 342 (433)
Q Consensus 263 Pg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~L 342 (433)
|--++.+ .+.||. .+|.. ....+...+++.+....|++.|...|+.+.. .+...+|+... ++....+.|
T Consensus 220 pw~Vn~~--a~~aa~-aaL~d--~~~~~~~~~~l~~er~~l~~~L~~~g~~~~~--s~anF~l~~~~----~a~~l~~~L 288 (330)
T PRK05664 220 PWTVSGP--TRWLAQ-AALAD--TPWQRQQRERLLAASQRLAALLRRHGLPPAG--GCALFQWVRTE----DAAALHEFL 288 (330)
T ss_pred CCCCCHH--HHHHHH-HHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEECC--CCCEEEEEECC----CHHHHHHHH
T ss_conf 9986099--999999-99639--9999999999999999999999978884279--95369996259----999999999
Q ss_pred HHCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 8567188037899899998889851224
Q gi|254780349|r 343 GRVSITCNKNSIPFDPESPFITSGIRLG 370 (433)
Q Consensus 343 e~~gI~~Nkn~iP~D~~~~~~~sGiRlG 370 (433)
.+.||.+-. + ..+.|||+|
T Consensus 289 ~~~GIlVR~----~-----~~~~~LRi~ 307 (330)
T PRK05664 289 ARRGILTRL----F-----EQPPSLRFG 307 (330)
T ss_pred HHCCEEEEE----C-----CCCCCEEEE
T ss_conf 969949978----8-----999977985
No 230
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.86 E-value=1.3e-05 Score=59.59 Aligned_cols=269 Identities=16% Similarity=0.202 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHHHH--CCCCEEEECCCC-CCCC---CCCCCC----CCCCC--CCCCCCCCCCC---------CCCCCCC
Q ss_conf 16799999999831--548748812334-4841---114766----54333--33220136658---------3235659
Q gi|254780349|r 103 SGSQMNQGVFLALM--HPGDSFMGLSLD-SGGH---LTHGSS----VNMSG--KWFKAIPYNVR---------KEDGLLD 161 (433)
Q Consensus 103 SG~~An~av~~ALl--~pGD~Il~~~l~-~GGH---lshg~~----~~~~g--~~~~~~~y~~d---------~~~~~ID 161 (433)
||+-||.+++...- ....+|+++.-. ||-. +|-... ..+.. -...++||+.+ ++....+
T Consensus 135 SGSEAvE~AiKlAR~~tgr~~Iis~~~~YHG~T~gals~tg~~~~~~~~~~~~~~~~~~p~p~~~r~p~~~~~~~~~~~~ 214 (464)
T PRK06938 135 TGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRAN 214 (464)
T ss_pred CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHH
T ss_conf 80899999999986467988599983478897065565417875555678889996781688644676677615678888
Q ss_pred HHHHHHHHHH--H---CCCEEEEE-----CCCCCCCCC-HHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCC-CCCC-C
Q ss_conf 8999999986--0---46678970-----552435363-7999988641797899186201244-32000123-2200-2
Q gi|254780349|r 162 MHEIESLAIE--Y---NPKLIIVG-----GTAYSRVWD-WERFRSIADSIGAYLMADISHISGL-VVGGQHPS-PVPH-C 227 (433)
Q Consensus 162 ~d~~~~~a~~--~---kPklIi~G-----~S~y~~~~d-~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~-Pl~~-A 227 (433)
.+.+++++.. . +|.-||+. +-..+-|-+ ++++|++||++|++|++|.-++ |+ =.|..|-. -+.. .
T Consensus 215 ~~~le~~i~~~~~g~~~iAAvi~EpIqg~gGvi~~p~~yl~~lr~lc~~~giLlI~DEVqt-GfGRTG~~fa~e~~gv~P 293 (464)
T PRK06938 215 LHYLENLLDDPESGVQLPAAVILEVVQGEGGVIPADDEWLRGLRRITEEAGIPLIVDEIQS-GFGRTGKMFAFEHAGIIP 293 (464)
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCC-CCCCCCCCHHHHHCCCCC
T ss_conf 9999999740540688248999888568779864998999999999866791598642012-677436840643236888
Q ss_pred CEEEECCCCCCCC--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Q ss_conf 3567404565225--67448983362056501664654322344556668999999997356489999999988899999
Q gi|254780349|r 228 HIVTTTTHKSLRG--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAK 305 (433)
Q Consensus 228 Dvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~ 305 (433)
|++| .-|.+.| |=++++ +++ ++. .......-++.+|+.+..-||+|+ + +.++. ...++|++.+.+
T Consensus 294 Diit--~gKglgGg~Plsavi-~~~-~i~-~~~~g~h~~T~~gnpla~Aaalav-L-~iie~------e~l~~~a~~~G~ 360 (464)
T PRK06938 294 DVVV--LSKAIGGSLPLAVVV-YRE-WLD-TWQPGAHAGTFRGNQMAMAAGSAT-L-RYIKE------HRLAEHAAAMGE 360 (464)
T ss_pred CEEE--ECHHCCCCCCEEEEE-ECH-HHH-HCCCCCCCCCCCCCHHHHHHHHHH-H-HHHHH------CCHHHHHHHHHH
T ss_conf 8798--630004877349999-827-765-047887487289998999999999-9-99986------449999999999
Q ss_pred HHHH----C--CCCCCCCCCCCCEEE-ECC---CCC-------CCC---HHHHHHHHHHCCEEEECCCCCCCCCCCCCCC
Q ss_conf 9861----6--852334588898126-316---655-------676---7999998885671880378998999988898
Q gi|254780349|r 306 KLQF----L--GFDIVSGGTDNHLML-VDL---RSK-------RMT---GKRAESILGRVSITCNKNSIPFDPESPFITS 365 (433)
Q Consensus 306 ~L~~----~--G~~vv~ggTd~H~vl-vdl---~~~-------~~~---G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~s 365 (433)
.|.+ . .++.|..-.-.-+++ |++ +.. ..+ +..+...|-+.|++++... ...+
T Consensus 361 ~l~~~L~~l~~~~p~V~dVRG~GLm~giElv~~~~~~d~~~~~p~~~~~~~~v~~~~l~~Gll~~~~g--------~~g~ 432 (464)
T PRK06938 361 RLLEHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASRIQRECLRRGLILELGG--------RHGS 432 (464)
T ss_pred HHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC--------CCCC
T ss_conf 99999999985399879764160699999841666644333565558999999999997892896468--------8999
Q ss_pred CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 51224666730799989999999999999602
Q gi|254780349|r 366 GIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 366 GiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
-|||--|-+ +.++|++++.+++.++|+.
T Consensus 433 virl~PPL~----it~eeid~~~~~l~~al~~ 460 (464)
T PRK06938 433 VVRFLPPLI----ITAEQIDEVAEIFAEAVYA 460 (464)
T ss_pred EEEEECCCC----CCHHHHHHHHHHHHHHHHH
T ss_conf 899979912----8899999999999999999
No 231
>PRK05965 hypothetical protein; Provisional
Probab=98.86 E-value=2.8e-06 Score=64.22 Aligned_cols=296 Identities=17% Similarity=0.191 Sum_probs=138.8
Q ss_pred HHHHHHHHHHHCC-CCCEECCCHHHHHHHHHHHHH-------HHCCC-CEEEECCCCCCCCCCCCCCCCCCC---CCC--
Q ss_conf 9999999998718-863010000167999999998-------31548-748812334484111476654333---332--
Q gi|254780349|r 81 ENIAIERAKKLFN-VNFVNVQSHSGSQMNQGVFLA-------LMHPG-DSFMGLSLDSGGHLTHGSSVNMSG---KWF-- 146 (433)
Q Consensus 81 E~la~~~a~~lF~-a~~anvqp~SG~~An~av~~A-------Ll~pG-D~Il~~~l~~GGHlshg~~~~~~g---~~~-- 146 (433)
.++|.+++..+-+ .+.+-. ..|||-||.+++.- -.+|| .+|+++.-..=|-..-+..++... +.|
T Consensus 93 ~~la~~L~~~~p~~l~~v~f-~~SGSEAvE~AlKlar~y~~a~g~~~r~~ii~~~~syHG~T~~~~slt~~~~~~~~~~~ 171 (459)
T PRK05965 93 IRLAAELAERAPGSLNHVYF-TLGGSDAVDSAVRFITHYWNATGRPSKKQFIALERGYHGSSSVGAGLTALPAFHRGFDL 171 (459)
T ss_pred HHHHHHHHHHCCCCCCEEEE-ECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCC
T ss_conf 99999999857888687998-48679999999999999999727998757999717858997431025777432235689
Q ss_pred -----CC--CCCCCCCCCC-------CCCHHHHHHHHHHHCCC---EEEE----E--CCCCCCCCCHHHHHHHHHHCCCE
Q ss_conf -----20--1366583235-------65989999999860466---7897----0--55243536379999886417978
Q gi|254780349|r 147 -----KA--IPYNVRKEDG-------LLDMHEIESLAIEYNPK---LIIV----G--GTAYSRVWDWERFRSIADSIGAY 203 (433)
Q Consensus 147 -----~~--~~y~~d~~~~-------~ID~d~~~~~a~~~kPk---lIi~----G--~S~y~~~~d~~~l~eIa~~~ga~ 203 (433)
.. .+|......+ .-+.+.+++.+.+..|. -||+ | +-..|-+-=++++|++|+++|++
T Consensus 172 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~vAAvi~EPi~g~gG~~~pp~~yl~~lr~lc~~~gil 251 (459)
T PRK05965 172 PLPWQHHIPSPYAYRNPVGDDPQAIIAASVAALEAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGIL 251 (459)
T ss_pred CCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEE
T ss_conf 99986235788655687889778899999999999998618875799995464466885328768879999998756917
Q ss_pred EEECCCCHHHH-HHHHCCCC-CCCC-CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCCHHH---CHH----HHHHHH
Q ss_conf 99186201244-32000123-2200-23567404565225---674489833620565016646---543----223445
Q gi|254780349|r 204 LMADISHISGL-VVGGQHPS-PVPH-CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKINSAI---FPG----LQGGPF 270 (433)
Q Consensus 204 l~~D~aH~~GL-Ia~g~~~~-Pl~~-ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~av---fPg----~qg~~~ 270 (433)
|++|.-++ |+ =.|..|-. -+.- .|++|.+ |.|.| |=|+++.+ + ++.+.+.... .|. +.+|.-
T Consensus 252 lI~DEV~T-GfGRtG~~fa~e~~gv~PDiv~~g--KgL~gG~~Plsav~~~-~-~i~~~~~~~~~~~~~~~hg~T~~gnp 326 (459)
T PRK05965 252 FVADEVIT-GFGRTGPLFACEAEGVVPDLMTVA--KGLTSGYVPMGAVLMS-D-HVYQGIADGAGAAAPVGHGYTYSAHP 326 (459)
T ss_pred EEEEECCC-CCCCCCCCCCCCCCCCCCCEEEEC--CCCCCCCCCEEEEEEC-H-HHHHHHHCCCCCCCCCCCCCCCCCCH
T ss_conf 99830541-776244741003666188888873--4345786751689764-8-99987611566565445677899898
Q ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCEEE-ECCCC-----CCCC-----HHHH
Q ss_conf 5666899999999735648999999998889999998616-852334588898126-31665-----5676-----7999
Q gi|254780349|r 271 MHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHLML-VDLRS-----KRMT-----GKRA 338 (433)
Q Consensus 271 ~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~vl-vdl~~-----~~~~-----G~~a 338 (433)
+..-||+++ .+.++.+ ...+++.+..+.|.+.|.+. ..+.|..-.---+++ +++.. ...+ +..+
T Consensus 327 la~Aaa~a~--L~~l~~~--~l~~~~~~~g~~l~~~L~~L~~~p~i~dVRG~GLm~gielv~d~~~~~~~~~~~~~~~~i 402 (459)
T PRK05965 327 VSAAVGLEV--LRLYHEG--GLLANGQAAAPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKASKTPFDAALEPADRI 402 (459)
T ss_pred HHHHHHHHH--HHHHHHC--CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHH
T ss_conf 999999999--9999863--499999999999999999876499768678256279999712654466775547999999
Q ss_pred HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99888567188037899899998889851224666730799989999999999999602577
Q gi|254780349|r 339 ESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDGSSS 400 (433)
Q Consensus 339 ~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~~~~ 400 (433)
.+++-+.|+++.... + .-||| +|.+| +.++|++++.+.+.++|+....
T Consensus 403 ~~~~~~~Glli~~~g---~-------~vl~l-~PPL~---It~~eid~~~~~l~~al~evl~ 450 (459)
T PRK05965 403 FDRAYANGLVFRAFG---D-------GVLGF-APALC---CTEGEFDLIFERTRKTLDDVLA 450 (459)
T ss_pred HHHHHHCCEEEEECC---C-------CEEEE-ECCCC---CCHHHHHHHHHHHHHHHHHHHH
T ss_conf 999996992998079---9-------98999-78820---8999999999999999999985
No 232
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=98.84 E-value=5.6e-06 Score=62.18 Aligned_cols=284 Identities=16% Similarity=0.181 Sum_probs=144.0
Q ss_pred HHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHC---------C-CCEEEECCCCCCCCCCCCCCCC---CCCC-C
Q ss_conf 99999999998718863010000167999999998315---------4-8748812334484111476654---3333-3
Q gi|254780349|r 80 IENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMH---------P-GDSFMGLSLDSGGHLTHGSSVN---MSGK-W 145 (433)
Q Consensus 80 iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~---------p-GD~Il~~~l~~GGHlshg~~~~---~~g~-~ 145 (433)
...++.+ ..++.+.+.+ ...-||+-|+.+++.-.-+ . ..+|+++.-.. ||.... +++. .
T Consensus 88 ~~~l~~~-l~~~~~~~~v-~f~~SGsEAve~AiklAr~~~~~~~g~~tgr~~ii~~~~~y-----HG~t~~~~s~s~~~~ 160 (404)
T PRK00854 88 LAPLYEE-LAALTGSHKV-LPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNF-----HGRTLSIVGFSTDPD 160 (404)
T ss_pred HHHHHHH-HHHCCCCCEE-EECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC-----CCCCCCCCCCCCCCC
T ss_conf 9999999-9740376848-85587799999999999998765037878985599964566-----786013543467743
Q ss_pred CCCCCCCCCCCCCCC---CHHHHHHHHHHHCCCE--EEE----ECC--CCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH
Q ss_conf 220136658323565---9899999998604667--897----055--24353637999988641797899186201244
Q gi|254780349|r 146 FKAIPYNVRKEDGLL---DMHEIESLAIEYNPKL--IIV----GGT--AYSRVWDWERFRSIADSIGAYLMADISHISGL 214 (433)
Q Consensus 146 ~~~~~y~~d~~~~~I---D~d~~~~~a~~~kPkl--Ii~----G~S--~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL 214 (433)
++...-++.+....+ |.+++++. ..|+. ||+ |.. ..+-+-=++++|++|++.|++|++|.-++ |+
T Consensus 161 ~~~~~~~~~~~~~~~p~~d~~~l~~~---~~~~~aAviiEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~T-Gf 236 (404)
T PRK00854 161 ARGGFGPFAPGFRVVPFGDAAALEAA---ITPNTVAFLIEPIQGEAGVIIPPAGYFRRVRELCTANNVTLILDEIQT-GL 236 (404)
T ss_pred CCCCCCCCCCCCEEECCCCHHHHHHH---HCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC-CC
T ss_conf 35688899998155056668999986---398748999917757789617998999999999997076445750001-78
Q ss_pred -HHHHCCCC-CCCC-CCEEEECCCCCCC-C--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHH
Q ss_conf -32000123-2200-2356740456522-5--674489833620565016646543223445566689999999973564
Q gi|254780349|r 215 -VVGGQHPS-PVPH-CHIVTTTTHKSLR-G--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSE 288 (433)
Q Consensus 215 -Ia~g~~~~-Pl~~-ADvvt~sTHKtl~-G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~ 288 (433)
=.|..|-. -+.- .|++|.+ |.+. | |=++++.. + ++.+.+......++.+|.-+...||+++- +.++.
T Consensus 237 GRtG~~fa~e~~gv~PDii~~g--Kgl~gG~~Pl~av~~~-~-~i~~~~~~~~h~~T~~gnpla~aaa~a~l--~~i~~- 309 (404)
T PRK00854 237 GRTGKLLAEEHEGIEADVTLIG--KALSGGFYPVSAVLSN-S-EVLGVLRPGQHGSTFGGNPLACAVARAAL--RVLVE- 309 (404)
T ss_pred CCCCCCCHHHHCCCCCCEEEEC--CCCCCCCCCCCEEECC-H-HHHHHCCCCCCCCCCCCCHHHHHHHHHHH--HHHHH-
T ss_conf 6355741455424897989756--4445887653202047-9-99950679887788898989999999999--99986-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE-ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf 8999999998889999998616852334588898126-316655676799999888567188037899899998889851
Q gi|254780349|r 289 FRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLML-VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGI 367 (433)
Q Consensus 289 f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vl-vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGi 367 (433)
..+.+++-+..+.|-+.|.+...+++..-.-.-+++ +++.+.....+...+.|-+.|+++... ....|
T Consensus 310 -e~l~~~~~~~g~~l~~~L~~l~~~~i~~VRG~Glm~gve~~~~~~~~~~~~~~~~~~Gll~~~~----------~~~~i 378 (404)
T PRK00854 310 -EGMIENAAEQGAYFLEGLRAIRGNIVREVRGRGLMLAVELEPEAGGARQYCEALKARGLLAKDT----------HDHTI 378 (404)
T ss_pred -CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEECCHHHHHHHHHHHHHCCEEECCC----------CCCEE
T ss_conf -5899999999999999998504897276644455999998556677999999999799598748----------99989
Q ss_pred CCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 22466673079998999999999999960
Q gi|254780349|r 368 RLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 368 RlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
|+.-|-+ +.++|++++.+.+.++|.
T Consensus 379 r~~PPL~----it~~eid~~l~~l~~~La 403 (404)
T PRK00854 379 RLAPPLV----ITREQVDWAVSQIAKVLA 403 (404)
T ss_pred EEECCCC----CCHHHHHHHHHHHHHHHC
T ss_conf 9979957----899999999999999966
No 233
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=98.82 E-value=7.6e-06 Score=61.21 Aligned_cols=268 Identities=19% Similarity=0.220 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHHHHHCCC-CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCC---CCHHHHHHHHHHHCCCE
Q ss_conf 016799999999831548-74881233448411147665433333220136-65832356---59899999998604667
Q gi|254780349|r 102 HSGSQMNQGVFLALMHPG-DSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPY-NVRKEDGL---LDMHEIESLAIEYNPKL 176 (433)
Q Consensus 102 ~SG~~An~av~~ALl~pG-D~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y-~~d~~~~~---ID~d~~~~~a~~~kPkl 176 (433)
-||+-||.+++..--..| .+|+++.-..=|+. .| ..++++.-....+| +....... =|.+++++... .+..-
T Consensus 110 ~SGsEA~E~AlKlAr~tgr~~Iis~~~sYHG~T-~g-a~s~tg~~~~~~~~~p~~~~~~~~p~~d~~~l~~~~~-~~iAA 186 (398)
T PRK03244 110 NSGAEANEAAFKLARLTGRTKIVAAEGGFHGRT-MG-ALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVD-DDTAA 186 (398)
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC-CC-CCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHC-CCEEE
T ss_conf 867789999999999829987999838776887-65-4233688531234678878727715786689999738-98589
Q ss_pred EEEEC----C--CCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCCC-CCC-CCEEEECCCCCCCC--CCCEE
Q ss_conf 89705----5--24353637999988641797899186201244-320001232-200-23567404565225--67448
Q gi|254780349|r 177 IIVGG----T--AYSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPSP-VPH-CHIVTTTTHKSLRG--PRGGL 245 (433)
Q Consensus 177 Ii~G~----S--~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~P-l~~-ADvvt~sTHKtl~G--PrgGi 245 (433)
||+.. . ..+-+-=+++++++|+++|.++++|.-+. |+ -.|..|... +.- .|++|.+ |.+.| |-+++
T Consensus 187 ii~EPiqg~gG~~~~~~~fl~~l~~lc~~~gillI~DEV~t-GfGRtG~~fa~e~~~v~PDIv~~g--K~lggG~P~sa~ 263 (398)
T PRK03244 187 VFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQT-GIGRTGAWFAHQHDGVTPDVVTLA--KGLGGGLPIGAC 263 (398)
T ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCC-CCCCCCCCCHHHHCCCCCCEEEEC--CCCCCCCCCEEE
T ss_conf 99858768899856888899999999857345366662124-877667861565337999889973--202488761688
Q ss_pred EEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE
Q ss_conf 98336205650166465432234455666899999999735648999999998889999998616852334588898126
Q gi|254780349|r 246 IMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLML 325 (433)
Q Consensus 246 I~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vl 325 (433)
+..+ ++.+.+.....-.+.+|..+...|++++- +.++. ..+.++|-+..+.|.+.|.+...+++..-.--.+++
T Consensus 264 ~~~~--~~~~~~~~~~h~~T~~gnpl~~aaa~a~L--~~i~~--~~l~~~v~~~g~~l~~~L~~l~~~~i~~VRG~Gl~~ 337 (398)
T PRK03244 264 LAFG--PAADLLTPGLHGSTFGGNPVACAAALAVL--RVIAD--EGLLENAERLGKQLRAGIEALGHPLVDHVRGRGLLL 337 (398)
T ss_pred EECH--HHHHHCCCCCCCCCCCCCHHHHHHHHHHH--HHHHH--CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEE
T ss_conf 9718--88864178876747898989999999999--99975--579999999999999999854898614100126899
Q ss_pred -ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf -316655676799999888567188037899899998889851224666730799989999999999999602
Q gi|254780349|r 326 -VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 326 -vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
+++.. + .++.....+-+.|++++.. + +.-||+.-|-+ +.++|++++-++|.++|+.
T Consensus 338 giel~~-~-~~~~~~~~~~~~Gll~~~~---g-------~n~ir~~PPl~----it~~eid~~~~~l~~~L~~ 394 (398)
T PRK03244 338 GIVLTA-P-VAKAVEAAAREAGFLVNAP---A-------PDVIRLAPPLI----ITDAQVDAFVAALPAILDA 394 (398)
T ss_pred EEEECC-C-HHHHHHHHHHHCCCEECCC---C-------CCEEEEECCCC----CCHHHHHHHHHHHHHHHHH
T ss_conf 999667-3-1999999999689199318---9-------99799949957----8999999999999999999
No 234
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=98.81 E-value=2.5e-06 Score=64.57 Aligned_cols=290 Identities=19% Similarity=0.174 Sum_probs=144.1
Q ss_pred HHHHHHHHHHCCC--CCEECCCHHHHHHHHHHHHHHH--CCCCEEEECCCC-CCCCC---CCCCCC----CCC--CCCCC
Q ss_conf 9999999987188--6301000016799999999831--548748812334-48411---147665----433--33322
Q gi|254780349|r 82 NIAIERAKKLFNV--NFVNVQSHSGSQMNQGVFLALM--HPGDSFMGLSLD-SGGHL---THGSSV----NMS--GKWFK 147 (433)
Q Consensus 82 ~la~~~a~~lF~a--~~anvqp~SG~~An~av~~ALl--~pGD~Il~~~l~-~GGHl---shg~~~----~~~--g~~~~ 147 (433)
....++..+++.. +.+ .-.-||+-||.+++..-- ...++|+++.-. ||-++ |-+... .+. ...+.
T Consensus 82 ~~la~~l~~~~p~~~~~v-~f~~sGsEA~e~AiklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~ 160 (413)
T cd00610 82 VELAELLLALTPEGLDKV-FFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVL 160 (413)
T ss_pred HHHHHHHHHHCCCCCCEE-EEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCCCE
T ss_conf 999999998569984879-9818777999999999999739988999868847876633441378322457788889966
Q ss_pred CCCCCCCC---CCCCCCHHHHHHHHHHHC--CCEEEEE----CC-CCCCCCC-HHHHHHHHHHCCCEEEECCCCHHHH-H
Q ss_conf 01366583---235659899999998604--6678970----55-2435363-7999988641797899186201244-3
Q gi|254780349|r 148 AIPYNVRK---EDGLLDMHEIESLAIEYN--PKLIIVG----GT-AYSRVWD-WERFRSIADSIGAYLMADISHISGL-V 215 (433)
Q Consensus 148 ~~~y~~d~---~~~~ID~d~~~~~a~~~k--PklIi~G----~S-~y~~~~d-~~~l~eIa~~~ga~l~~D~aH~~GL-I 215 (433)
.++|+.-. ....-|.+++++..++.. ..-||+. .. .++-+-+ ++++|++|++.|.+|++|.-++ |+ =
T Consensus 161 ~~p~~~~~~~~~~~~~d~~~l~~~~~~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~t-GfGR 239 (413)
T cd00610 161 HVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQT-GFGR 239 (413)
T ss_pred EECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHEEECCCEEEEEECEE-CCCC
T ss_conf 808987655543227789999999973899789999979878899873888997888632860580698520200-7775
Q ss_pred HHHCCC-CCCCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHH--HHHCHHH
Q ss_conf 200012-32200-23567404565225--674489833620565016646543223445566689999999--9735648
Q gi|254780349|r 216 VGGQHP-SPVPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFG--EALSSEF 289 (433)
Q Consensus 216 a~g~~~-~Pl~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~--Ea~~~~f 289 (433)
.|..|- .-+.- .|++|. -|.|.| |-|+++.. + ++.+.+.... +.+++.....-.+.|+++. +.++.
T Consensus 240 tG~~~a~~~~gv~PDivt~--gK~lggG~Pisav~~~-~-~i~~~~~~~~--~~h~~T~~gnp~~~Aaa~a~L~~i~~-- 311 (413)
T cd00610 240 TGKMFAFEHFGVEPDIVTL--GKGLGGGLPLGAVLGR-E-EIMDAFPAGP--GLHGGTFGGNPLACAAALAVLEVLEE-- 311 (413)
T ss_pred CCCCCHHHHCCCCCCEEEE--CCCCCCCCCCEEEEEC-H-HHHHHHHCCC--CEECCCCCCCHHHHHHHHHHHHHHHH--
T ss_conf 4543123325817875652--3345688986047775-9-9999863388--50677888884999999999999842--
Q ss_pred HHHHHHHHHHHHHHHHHHHHC--CCCCCC---C-CCCCCEEEECCCCC-C---CCHHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 999999998889999998616--852334---5-88898126316655-6---767999998885671880378998999
Q gi|254780349|r 290 RDYAKQIVLNSQALAKKLQFL--GFDIVS---G-GTDNHLMLVDLRSK-R---MTGKRAESILGRVSITCNKNSIPFDPE 359 (433)
Q Consensus 290 ~~Ya~qvv~NA~~La~~L~~~--G~~vv~---g-gTd~H~vlvdl~~~-~---~~G~~a~~~Le~~gI~~Nkn~iP~D~~ 359 (433)
..+.+++-+..+.|.+.|.+. .++++. | |.-..+-+++-+.. . -......+.|-+.|+++....
T Consensus 312 e~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g------ 385 (413)
T cd00610 312 EGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG------ 385 (413)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEECCC------
T ss_conf 56999999999999999999997489936964324499999936877677589999999999997994891179------
Q ss_pred CCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 988898512246667307999899999999999996
Q gi|254780349|r 360 SPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 360 ~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
++-||+--|-. +.++|++++-+.+.++|
T Consensus 386 ----~~~l~~~Ppl~----it~~eid~~~~~l~~aL 413 (413)
T cd00610 386 ----GNVIRLLPPLI----ITEEEIDEGLDALDEAL 413 (413)
T ss_pred ----CCEEEEECCCC----CCHHHHHHHHHHHHHHC
T ss_conf ----99899978836----89999999999999869
No 235
>pfam02347 GDC-P Glycine cleavage system P-protein. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is:- Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2
Probab=98.81 E-value=6.6e-07 Score=68.61 Aligned_cols=305 Identities=16% Similarity=0.197 Sum_probs=164.6
Q ss_pred CCCCCHHHHH--HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH--HHHHHHHCCCCCEECCCHHHHH-HHHHHHHHH-
Q ss_conf 0102989999--830510288657988875336006799999999--9999987188630100001679-999999983-
Q gi|254780349|r 42 ENIVSRAVLE--AQGSILTNKYAEGYPSKRYYGGCQYVDDIENIA--IERAKKLFNVNFVNVQSHSGSQ-MNQGVFLAL- 115 (433)
Q Consensus 42 EN~~S~~v~~--~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la--~~~a~~lF~a~~anvqp~SG~~-An~av~~AL- 115 (433)
..++++.|.. +..+.|..-|.- |+.-. ---.+|.+- +...++|-|.+-||.-.+-|.. +.-|+.+|.
T Consensus 76 ~h~vP~vi~~~i~~r~efyTaYTP------YQpEi-SQG~LqalfefQtmi~eLTGmdvaNASlyD~aTA~aEA~~ma~r 148 (429)
T pfam02347 76 DTIIPAVILRNILENPEWYTQYTP------YQPEI-SQGRLEALLNFQTMVCDLTGLDVANASLLDEGTAAAEAMALAAR 148 (429)
T ss_pred CCCCCCHHHHHHCCCCCCEECCCC------CCCHH-HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 976581564654047664303699------98154-43799999999999999858875687666678899999999876
Q ss_pred -HC-CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC-CCCCCCCCHHH
Q ss_conf -15-4874881233448411147665433333220136658323565989999999860466789705-52435363799
Q gi|254780349|r 116 -MH-PGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGG-TAYSRVWDWER 192 (433)
Q Consensus 116 -l~-pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~-S~y~~~~d~~~ 192 (433)
.+ ..++|+..+--+-..++--.. -..+...+++..+++.. +..|. ..---+++-+ ..+....|+++
T Consensus 149 ~~k~~~~~vlv~~~~hP~~~~Vl~T-~~~~~~i~i~~~~~~~~-~~~~~---------~~~a~v~~q~Pn~~G~ied~~~ 217 (429)
T pfam02347 149 ISKGKKKKFVVDKDCHPQTLDVLRT-RAKGFGIEIVEVDLTEE-GFSDE---------GDVFGVLVQYPNTEGRIEDYKE 217 (429)
T ss_pred HHCCCCCEEEEECCCCHHHHHHHHH-HHHCCCCEEEEECCCCC-CCCCC---------CCEEEEEEECCCCCCCEECCHH
T ss_conf 5157887799828878318999997-54227957999672001-45555---------4768999937999831723499
Q ss_pred HHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECC-----CCCCCCCCCEEEEECCCCHHHHC---------
Q ss_conf 9988641797899186201244320001232200-23567404-----56522567448983362056501---------
Q gi|254780349|r 193 FRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTT-----HKSLRGPRGGLIMTNHADLAKKI--------- 257 (433)
Q Consensus 193 l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sT-----HKtl~GPrgGiI~~~~~e~~~~i--------- 257 (433)
+.++|++.|+++++ . .-+++=+++.+|=++ |||+.++. |-.|.||..|++-|++ ++..++
T Consensus 218 i~~~~h~~gal~iv-~---~dplsL~ll~~Pg~~GaDI~vG~~Q~lGipm~fGGP~~gf~a~~~-~~~R~~PGRivG~t~ 292 (429)
T pfam02347 218 LIEIAHQHGSLVVV-A---ADLLALTILKPPGEFGADIVVGSAQRFGVPMGYGGPHAGFFAVKE-ELKRKMPGRIVGVSK 292 (429)
T ss_pred HHHHHHHCCCEEEE-E---ECHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHH-HHHHHCCCCCCCCCC
T ss_conf 99998645966999-8---077996076897656633797257657888788988200154488-899749976446775
Q ss_pred ---------------------CHHHCHHHHHHHHHHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHC-CCCC
Q ss_conf ---------------------6646543223445566689999999973564-8999999998889999998616-8523
Q gi|254780349|r 258 ---------------------NSAIFPGLQGGPFMHSIAAKAVAFGEALSSE-FRDYAKQIVLNSQALAKKLQFL-GFDI 314 (433)
Q Consensus 258 ---------------------~~avfPg~qg~~~~~~iaa~aval~Ea~~~~-f~~Ya~qvv~NA~~La~~L~~~-G~~v 314 (433)
++|.-.-....-++..+|+.-.++ +-|+ .++-++++..+|+.|++.|.+. |+.
T Consensus 293 D~~G~~~~~ltLqtREQHIrReKAtSNICTnqaL~A~~a~~Y~~~---~Gp~GL~~iA~~~~~~A~yl~~~L~~~~g~~- 368 (429)
T pfam02347 293 DANGKRALRLALQTREQHIRRDKATSNICTAQALLANMAAMYAVY---HGPKGLKEIARRIHSLTLYLAKGLKKLAGHE- 368 (429)
T ss_pred CCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH---HCHHHHHHHHHHHHHHHHHHHHHHHHCCCEE-
T ss_conf 889987336541243430334442034650089999999999998---6978899999999999999999998669976-
Q ss_pred CCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf 345888981263166556767999998885671880378998999988898512246667307999899999999
Q gi|254780349|r 315 VSGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGE 389 (433)
Q Consensus 315 v~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~ 389 (433)
+.+..-...+++...+ +.+++.+++ +|.-..|.-..| ...+-+-..|.+| .+|+..+.+
T Consensus 369 ~~~~~Ffd~v~~~~~~-----~~~~~l~~~-~i~~G~~l~~~~------~~~~li~vtE~~T----~edId~Lv~ 427 (429)
T pfam02347 369 LDHDHFFDTLKITVED-----RAAEELLKR-AEKGGINLRYVD------LGTVGIALDETTT----KEDVDALLK 427 (429)
T ss_pred CCCCCCCCEEEEECCC-----HHHHHHHHH-HHHCCCCEEECC------CCEEEEEECCCCC----HHHHHHHHH
T ss_conf 6799962159996282-----789999999-997799736538------9949999647999----999999997
No 236
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=98.81 E-value=1.1e-05 Score=59.98 Aligned_cols=270 Identities=15% Similarity=0.158 Sum_probs=136.0
Q ss_pred CHHHHHHHHHHHHHHH--------CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCC---CHHHHHHH
Q ss_conf 0016799999999831--------54874881233448411147665433333220136-658323565---98999999
Q gi|254780349|r 101 SHSGSQMNQGVFLALM--------HPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPY-NVRKEDGLL---DMHEIESL 168 (433)
Q Consensus 101 p~SG~~An~av~~ALl--------~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y-~~d~~~~~I---D~d~~~~~ 168 (433)
..||+-||.+++..-- ...++|+++.-..=|. .....+.++.-.....| +..+....+ |.++++++
T Consensus 102 ~~SGsEAve~AiKlAr~~~~~~~~~~r~~Ii~~~~~yHG~--t~~~~s~~g~~~~~~~~~p~~~~~~~~~~~d~~~~~~~ 179 (406)
T PRK12381 102 CNSGAEANEAALKLARKYAHDRYGNHKSGIVAFKNAFHGR--TLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASAL 179 (406)
T ss_pred ECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC--CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 4877789999999999999863899987699967876788--32232157873335677889974435652229999997
Q ss_pred HHHHCCCEEEE----ECCC-C-CCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCC-CCCC-CCEEEECCCCCCC
Q ss_conf 98604667897----0552-4-353637999988641797899186201244-32000123-2200-2356740456522
Q gi|254780349|r 169 AIEYNPKLIIV----GGTA-Y-SRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPS-PVPH-CHIVTTTTHKSLR 239 (433)
Q Consensus 169 a~~~kPklIi~----G~S~-y-~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~-Pl~~-ADvvt~sTHKtl~ 239 (433)
+.. +..-||+ |..- + +-+-=++++|++|++.|.+|++|.-++ |+ =-|..|.. -+.- .|++|. -|.|.
T Consensus 180 ~~~-~~aAvivEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~t-G~GRtG~~~a~~~~gv~PDiv~~--gK~lg 255 (406)
T PRK12381 180 IDD-QTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQT-GVGRTGELYAYMHYGVTPDVLTT--AKALG 255 (406)
T ss_pred HCC-CCEEEEEECCCCCCCCCCCCHHHHHHHHHHEECCCCEEECCCCEE-CCCCCCCCCCCCCCCCCCCEEEE--CCCCC
T ss_conf 388-835999906456688326898999999975211583797444200-77766676535466789988997--42024
Q ss_pred C--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--CCCCC
Q ss_conf 5--6744898336205650166465432234455666899999999735648999999998889999998616--85233
Q gi|254780349|r 240 G--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL--GFDIV 315 (433)
Q Consensus 240 G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~--G~~vv 315 (433)
| |=++++.. + ++.+.++....-.+.+|.-+...||++ +|....++++ ..++-+-.+.|.+.|.+. .++++
T Consensus 256 gG~P~sav~~~-~-~i~~~~~~~~h~~T~~gnpla~aaa~a-~L~~i~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~i 329 (406)
T PRK12381 256 GGFPIGAMLTT-E-KYASVMTVGTHGTTYGGNPLASAVAGK-VLDLINTPEM---LNGVKQRHDWFVERLNTINARYGLF 329 (406)
T ss_pred CCCEEEEEEEC-H-HHHHHCCCCCCCCCCCCCHHHHHHHHH-HHHHHHHCCH---HHHHHHHHHHHHHHHHHHHHHCCCE
T ss_conf 88604899872-8-878652888766389869999999999-9999975569---9999999999999999988738988
Q ss_pred CCCCCCCEEE-ECCC-CCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 4588898126-3166-5567679999988856718803789989999888985122466673079998999999999999
Q gi|254780349|r 316 SGGTDNHLML-VDLR-SKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQ 393 (433)
Q Consensus 316 ~ggTd~H~vl-vdl~-~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~ 393 (433)
..-.-.-+++ +.+. +..-..+...+.+.+.|+.+.... +.-||+.-|-+ +.++|+.+.-+.+.+
T Consensus 330 ~dVRG~GLm~giel~~~~~~~~~~l~~~~~~~Gll~~~~g----------~n~irl~PPL~----it~~eid~~l~~l~~ 395 (406)
T PRK12381 330 SEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIAG----------PNVVRFAPALN----VSEEEIATGLDRFAR 395 (406)
T ss_pred EEEEECCEEEEEEECCCCCCHHHHHHHHHHHCCEEEEECC----------CCEEEEECCCC----CCHHHHHHHHHHHHH
T ss_conf 8630252699999648875359999999997996996079----------99699979953----899999999999999
Q ss_pred HHH
Q ss_conf 960
Q gi|254780349|r 394 ILD 396 (433)
Q Consensus 394 ~L~ 396 (433)
+|+
T Consensus 396 al~ 398 (406)
T PRK12381 396 ACE 398 (406)
T ss_pred HHH
T ss_conf 999
No 237
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.80 E-value=1.4e-05 Score=59.43 Aligned_cols=290 Identities=18% Similarity=0.191 Sum_probs=156.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCC-----CEEEECCCCCCCCCCCCCCCCCCCCC-CCCCC
Q ss_conf 9999999999999871886301000016799999999831548-----74881233448411147665433333-22013
Q gi|254780349|r 77 VDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPG-----DSFMGLSLDSGGHLTHGSSVNMSGKW-FKAIP 150 (433)
Q Consensus 77 ~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pG-----D~Il~~~l~~GGHlshg~~~~~~g~~-~~~~~ 150 (433)
.+..+.|+.++++-.-.++.+=. .-||+-||-+++..--+-+ -+|+++.-..=|+.- ..+++++.- |.-.+
T Consensus 83 ~~~~~~la~~L~~~s~~~d~vff-~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~--galS~t~~~ky~~~F 159 (404)
T COG4992 83 NEPQAELAEKLVELSPFADRVFF-CNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTL--GALSATGQPKYRKGF 159 (404)
T ss_pred CHHHHHHHHHHHHHCCCCCEEEE-CCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC--EEEECCCCHHHCCCC
T ss_conf 86999999999962866668997-578389999999999997088887579997477577662--336656884222678
Q ss_pred CCCCCCCCCC---CHHHHHHHHHHHCCCEEEEE----C-CCCC-CCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCC
Q ss_conf 6658323565---98999999986046678970----5-5243-53637999988641797899186201244-320001
Q gi|254780349|r 151 YNVRKEDGLL---DMHEIESLAIEYNPKLIIVG----G-TAYS-RVWDWERFRSIADSIGAYLMADISHISGL-VVGGQH 220 (433)
Q Consensus 151 y~~d~~~~~I---D~d~~~~~a~~~kPklIi~G----~-S~y~-~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~ 220 (433)
.|.-+....+ |.|++++.+.+ +..-||+. - -..| -+-=++.+|++||++|++|++|.=|+ |+ =-|..|
T Consensus 160 ~Pl~~g~~~vpfnDi~al~~ai~~-~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQt-G~GRTGk~f 237 (404)
T COG4992 160 GPLLPGFRHVPFNDIEALEAAIDE-DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQT-GLGRTGKLF 237 (404)
T ss_pred CCCCCCCEECCCCCHHHHHHHHCC-CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCC-CCCCCCHHH
T ss_conf 899999536178998999987365-758999826668889877998999999999987192999964313-888663178
Q ss_pred CCCC-C-CCCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHH---HHHHHCHHHHHHH
Q ss_conf 2322-0-023567404565225--6744898336205650166465432234455666899999---9997356489999
Q gi|254780349|r 221 PSPV-P-HCHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVA---FGEALSSEFRDYA 293 (433)
Q Consensus 221 ~~Pl-~-~ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~ava---l~Ea~~~~f~~Ya 293 (433)
.--- . ..||+| +-|.|.| |-|+++.+ + ++++. .-||..|+..=..--|.|++ +....++.+ .
T Consensus 238 A~e~~gV~PDI~t--laK~LgGG~PigA~la~-~-~~~~~----~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~l---l 306 (404)
T COG4992 238 AYEHYGVEPDILT--LAKALGGGFPIGAMLAT-E-EIASA----FTPGDHGSTFGGNPLACAVALAVLEVLLEEGL---L 306 (404)
T ss_pred HHHHHCCCCCEEE--EECCCCCCCCCEEEEEC-H-HHHHC----CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---H
T ss_conf 9897488877788--60124588332355774-2-66624----78876567778679999999999999800308---9
Q ss_pred HHHHHHHHHHHHHHHH--CCCCCCCCCCCCCEEE-ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999888999999861--6852334588898126-316655676799999888567188037899899998889851224
Q gi|254780349|r 294 KQIVLNSQALAKKLQF--LGFDIVSGGTDNHLML-VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLG 370 (433)
Q Consensus 294 ~qvv~NA~~La~~L~~--~G~~vv~ggTd~H~vl-vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlG 370 (433)
.+|-+-...|.+.|.+ ..|+++..-----+++ +.++... ...++.+.|...|+.++.- -++-||+-
T Consensus 307 ~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~-~a~~~~~~~~~~gvL~~~a----------~~~ViR~~ 375 (404)
T COG4992 307 ENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPY-RARDIVRALREEGVLVLPA----------GPNVIRFL 375 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEEECCCC-CHHHHHHHHHHCCEEEECC----------CCCEEEEC
T ss_conf 999999999999999975127721224215049999944764-5799999999789699607----------88848845
Q ss_pred CHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 666730799989999999999999602
Q gi|254780349|r 371 TPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 371 T~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
-|-+ +.++|+++.-+.+.+++..
T Consensus 376 PpL~----i~~eei~~~~~~l~~al~~ 398 (404)
T COG4992 376 PPLV----ITEEEIDEALDALERALAA 398 (404)
T ss_pred CCCC----CCHHHHHHHHHHHHHHHHH
T ss_conf 8752----8899999999999999996
No 238
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.76 E-value=3.1e-05 Score=56.96 Aligned_cols=289 Identities=18% Similarity=0.177 Sum_probs=147.4
Q ss_pred HHHHHHHHHHHHHC-CCCCEECCCHHHHHHHHHHHHHH-------HCCCCEEEECCCCCCCCCCCCCCCCCCC-----CC
Q ss_conf 99999999999871-88630100001679999999983-------1548748812334484111476654333-----33
Q gi|254780349|r 79 DIENIAIERAKKLF-NVNFVNVQSHSGSQMNQGVFLAL-------MHPGDSFMGLSLDSGGHLTHGSSVNMSG-----KW 145 (433)
Q Consensus 79 ~iE~la~~~a~~lF-~a~~anvqp~SG~~An~av~~AL-------l~pGD~Il~~~l~~GGHlshg~~~~~~g-----~~ 145 (433)
..++||.+++..+. +.+.+-. .-||+-||.+++.-- ..+..+|+++.-..=|. |.+ ..++++ ..
T Consensus 86 ~~~~lA~~L~~~~p~~~~~v~f-~~SGsEA~e~AiKlA~~y~~~~g~~r~~ii~~~~~yHG~-T~~-a~s~~~~~~~~~~ 162 (421)
T PRK05964 86 PAERLAKRLVALTPGGLDHVFF-SDSGSVAVEVALKMALQYWRNRGEPRSRFLSLRGGYHGD-TLG-TMSVGMHGLFNAT 162 (421)
T ss_pred HHHHHHHHHHHHCCCCCCEEEE-ECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-CEE-EEECCCCCCCCCC
T ss_conf 9999999999847877587999-478136999999999999986399751899973886898-513-4323575334578
Q ss_pred C-------CCCCCCCCCCCCCCCHHHHHHHHHHHCCC--EEEEEC-------CCCCCCCCHHHHHHHHHHCCCEEEECCC
Q ss_conf 2-------20136658323565989999999860466--789705-------5243536379999886417978991862
Q gi|254780349|r 146 F-------KAIPYNVRKEDGLLDMHEIESLAIEYNPK--LIIVGG-------TAYSRVWDWERFRSIADSIGAYLMADIS 209 (433)
Q Consensus 146 ~-------~~~~y~~d~~~~~ID~d~~~~~a~~~kPk--lIi~G~-------S~y~~~~d~~~l~eIa~~~ga~l~~D~a 209 (433)
+ ...+|+- +...-+.+.++++++++..+ -||+.. ...+-+-=++++|++|++.|++|++|.-
T Consensus 163 ~~~~~~~~~~~~~p~--~~~~~~~~~le~~~~~~~~~iAAvi~EP~iqg~GG~~~~p~~y~~~lr~lc~~~gillI~DEV 240 (421)
T PRK05964 163 YGPLLFQVLALPVPR--DYEQAYLDALEALLEKHAGEIAAVIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEI 240 (421)
T ss_pred CCCCCCCCEECCCCC--CCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCC
T ss_conf 888888876558998--633889999999997479977899997884678997678889999998871006804651211
Q ss_pred CHHHH-HHHHCCC-CCCCC-CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCCH-----HHCHH-HHHHHHHHHHHHH
Q ss_conf 01244-3200012-32200-23567404565225---6744898336205650166-----46543-2234455666899
Q gi|254780349|r 210 HISGL-VVGGQHP-SPVPH-CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKINS-----AIFPG-LQGGPFMHSIAAK 277 (433)
Q Consensus 210 H~~GL-Ia~g~~~-~Pl~~-ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~-----avfPg-~qg~~~~~~iaa~ 277 (433)
++ |+ =.|..|- .-+.- .|++|.+ |.|.| |-|+++.+ + ++.+.+.. +.+-+ +.++.-+..-||+
T Consensus 241 ~t-GfGRtG~~fa~e~~gv~PDivt~g--Kgl~gG~~Pisav~~~-~-~i~~~~~~~~~~~~~~h~~T~~gnpla~aaa~ 315 (421)
T PRK05964 241 AT-GFGRTGTLFACEQAGVSPDIMCLS--KGLTGGYLPLAATLCT-A-EIFDAFYSDDRAKAFMHSPSYTANPLACAAAN 315 (421)
T ss_pred CC-CCCCCCCCCCCCCCCCCCCEEEEC--CCCCCCCCCEEEEEEC-H-HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 02-687567887543002589878872--2035787624899985-8-99976316787764003788888969999999
Q ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCEE-EECCCCC--CCCHHHHHHHHHHCCEEEECCC
Q ss_conf 999999735648999999998889999998616-85233458889812-6316655--6767999998885671880378
Q gi|254780349|r 278 AVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHLM-LVDLRSK--RMTGKRAESILGRVSITCNKNS 353 (433)
Q Consensus 278 aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~v-lvdl~~~--~~~G~~a~~~Le~~gI~~Nkn~ 353 (433)
| .|.+ ++. ..+.+++-+..+.|.+.|.+. .++.++.-----++ -+++... .-.+....+.+.+.|++++.
T Consensus 316 a-~L~~-i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~I~dvRG~GL~~~ie~~~~~~~~~~~~i~~~~~~~Glli~~-- 389 (421)
T PRK05964 316 A-SLDL-FED--EPVLERVAALSAGLTEGLEPFRDLPRVADVRVLGAIGAVELDRPDDGRIGPALTAAFLDRGVLLRP-- 389 (421)
T ss_pred H-HHHH-HHC--CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEE--
T ss_conf 9-9999-964--519999999999999999974359976764104629999972578679999999999978909996--
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9989999888985122466673079998999999999999960
Q gi|254780349|r 354 IPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 354 iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
.. +-||+. |+++ +.++|++++.+.+.++|+
T Consensus 390 --~g-------n~ir~~-PpL~---it~~eid~~~~~l~~al~ 419 (421)
T PRK05964 390 --LG-------NTIYLM-PPYI---ITPEELARITDAIVEVAD 419 (421)
T ss_pred --CC-------CEEEEE-CCCC---CCHHHHHHHHHHHHHHHH
T ss_conf --69-------999997-8936---899999999999999996
No 239
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=98.75 E-value=1.2e-05 Score=59.92 Aligned_cols=265 Identities=16% Similarity=0.212 Sum_probs=134.2
Q ss_pred HHHHHHHHHHHHHHH--CCCCEEEECCCCC-CCCCCCCCCCCCCC------------CCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 016799999999831--5487488123344-84111476654333------------33220136658323565989999
Q gi|254780349|r 102 HSGSQMNQGVFLALM--HPGDSFMGLSLDS-GGHLTHGSSVNMSG------------KWFKAIPYNVRKEDGLLDMHEIE 166 (433)
Q Consensus 102 ~SG~~An~av~~ALl--~pGD~Il~~~l~~-GGHlshg~~~~~~g------------~~~~~~~y~~d~~~~~ID~d~~~ 166 (433)
.||+-||.+++..-- ....+|+++.-.. |-++ | ..++++ .....+||+-......-|.+.++
T Consensus 110 ~SGSEAvE~AiKlAR~~tgr~~Iis~~~~YHG~T~--g-als~tg~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~e 186 (426)
T PRK09264 110 PTGTNAVEAALKLARKVTGRTNIISFTNGFHGMTL--G-ALAVTGNAHKRGGAGVPLNHVTFMPYDGYFGGDVDTLAYLE 186 (426)
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC--E-EEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHH
T ss_conf 98227999999999983499859998377578741--4-55503784345778899788177278886678701699999
Q ss_pred HHHHHH-----CCCEEEE----ECC--CCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHC-CCCCCCC----CCEE
Q ss_conf 999860-----4667897----055--2435363799998864179789918620124432000-1232200----2356
Q gi|254780349|r 167 SLAIEY-----NPKLIIV----GGT--AYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQ-HPSPVPH----CHIV 230 (433)
Q Consensus 167 ~~a~~~-----kPklIi~----G~S--~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~-~~~Pl~~----ADvv 230 (433)
++++.. +|.-||+ |.+ ..+-+-=++++|++||++|.+|++|.-++ |+=-.|. |- +++ .|+|
T Consensus 187 ~~l~~~~~g~d~iAAviiEPiqg~gG~~~~p~~yl~~lr~lc~~~giLlI~DEV~t-GfGRTG~~fa--~e~~gv~PDiv 263 (426)
T PRK09264 187 KLLEDSSSGVDLPAAVIVETVQGEGGLNVASAEWLQRLEKLCRKHDILLIVDDIQA-GCGRTGTFFS--FEEAGIKPDIV 263 (426)
T ss_pred HHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCC-CCCCCCCCCC--CCCCCCCCCEE
T ss_conf 99876237888616999878668889824998999999999987075067332010-7786778302--10479998779
Q ss_pred EECCCCCCCC---CCCEEEEECCCCHHHHCCHHHCHHHHH----HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Q ss_conf 7404565225---674489833620565016646543223----445566689999999973564899999999888999
Q gi|254780349|r 231 TTTTHKSLRG---PRGGLIMTNHADLAKKINSAIFPGLQG----GPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQAL 303 (433)
Q Consensus 231 t~sTHKtl~G---PrgGiI~~~~~e~~~~i~~avfPg~qg----~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~L 303 (433)
|. -|.|.| |=+++ ++++ ++. ...||.++ |..+...||.+ ++....+. ..+.+++-+..+.|
T Consensus 264 ~~--gKglsGgg~P~sav-~~~~-e~d-----~~~~g~h~~Tf~Gnp~a~aaa~a-~L~~~~~~--~~l~~~v~~~g~~l 331 (426)
T PRK09264 264 TL--SKSISGYGLPMALV-LIKP-ELD-----QWKPGEHNGTFRGNNLAFVTATA-ALETYWSD--DAFEKEVKRKGELV 331 (426)
T ss_pred EE--CHHHCCCCCCEEEE-EECH-HHC-----CCCCCCCCCCCCCCCHHHHHHHH-HHHHHHHH--CHHHHHHHHHHHHH
T ss_conf 88--64336897104999-9734-440-----46775446677888299999999-99999871--47999999999999
Q ss_pred HHHHHHC--CC-CCCCCCCCCCEEE-ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCC
Q ss_conf 9998616--85-2334588898126-316655676799999888567188037899899998889851224666730799
Q gi|254780349|r 304 AKKLQFL--GF-DIVSGGTDNHLML-VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGF 379 (433)
Q Consensus 304 a~~L~~~--G~-~vv~ggTd~H~vl-vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~ 379 (433)
.+.|.+. .+ +++..-.---+++ +++.+.... .++.+.+-+.|+++..+.- . ..-|||.-| ++ .
T Consensus 332 ~~~L~~l~~~~~~~v~dvRG~Glm~giel~~~~~~-~~i~~~~~~~Gll~~~~g~-~-------~~vir~~PP-L~---i 398 (426)
T PRK09264 332 RERLEEIAAEYPGLGLSVRGRGMMQGIDFGDGELA-GKICRRAFENGLIIETSGP-N-------DEVVKLLPP-LT---I 398 (426)
T ss_pred HHHHHHHHHHCCCCEEEEEEEEEEEEEEECCHHHH-HHHHHHHHHCCCEEEECCC-C-------CCEEEEECC-EE---C
T ss_conf 99999999768996278886028999993776889-9999999978988964489-9-------988999799-20---8
Q ss_pred CHHHHHHHHHHHHHHHHC
Q ss_conf 989999999999999602
Q gi|254780349|r 380 KEKDFEYIGELIAQILDG 397 (433)
Q Consensus 380 ~e~em~~iA~li~~~L~~ 397 (433)
.++|+.++.+.+.++|+.
T Consensus 399 t~~eid~~~~~l~~al~~ 416 (426)
T PRK09264 399 DEEELEEGLDILEEAVAE 416 (426)
T ss_pred CHHHHHHHHHHHHHHHHH
T ss_conf 899999999999999999
No 240
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=98.75 E-value=1.6e-05 Score=58.98 Aligned_cols=270 Identities=15% Similarity=0.175 Sum_probs=133.9
Q ss_pred CHHHHHHHHHHHHHHH-------C-CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCC---CHHHHHHH
Q ss_conf 0016799999999831-------5-4874881233448411147665433333220136-658323565---98999999
Q gi|254780349|r 101 SHSGSQMNQGVFLALM-------H-PGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPY-NVRKEDGLL---DMHEIESL 168 (433)
Q Consensus 101 p~SG~~An~av~~ALl-------~-pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y-~~d~~~~~I---D~d~~~~~ 168 (433)
..||+-||.+++..-- . ...+|+++.-..-|+. ....+.++.-.....| ++......+ |.+.+++.
T Consensus 98 ~~sGsEA~e~AlklAr~~~~~~~~~~k~~iis~~~~yHG~t--~~~~s~~~~~~~~~~~~p~~~~~~~~~~~d~~~~~~~ 175 (397)
T TIGR03246 98 CNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRT--LFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKAL 175 (397)
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHH
T ss_conf 28677899999999999998517999768999727868985--6410468996556788899976420452339999985
Q ss_pred HHHHCCCEEEEE------CCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCCC-CCC-CCEEEECCCCCCC
Q ss_conf 986046678970------5524353637999988641797899186201244-320001232-200-2356740456522
Q gi|254780349|r 169 AIEYNPKLIIVG------GTAYSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPSP-VPH-CHIVTTTTHKSLR 239 (433)
Q Consensus 169 a~~~kPklIi~G------~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~P-l~~-ADvvt~sTHKtl~ 239 (433)
+.. +..-||+. +...+-+--++++|++|++.|+++++|.-++ |+ =.|..|... +.- .|+++. -|.|.
T Consensus 176 ~~~-~iaAvi~EPv~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~~--gK~l~ 251 (397)
T TIGR03246 176 ISD-KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQT-GVGRTGELYAYMHYGVTPDILTS--AKALG 251 (397)
T ss_pred HCC-CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCEEE-CCCCCCCCCHHHCCCCCCCEEEE--CCCCC
T ss_conf 288-737999938778889873888999999999998593586341220-78777783143226989987887--42246
Q ss_pred C--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--CCCCC
Q ss_conf 5--6744898336205650166465432234455666899999999735648999999998889999998616--85233
Q gi|254780349|r 240 G--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL--GFDIV 315 (433)
Q Consensus 240 G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~--G~~vv 315 (433)
| |-++++.. + ++.+.+.....-.+.+|.-+...||+++- +.++. ....+++-+..+.|.+.|.+. .++++
T Consensus 252 gG~P~sav~~~-~-~i~~~~~~~~h~~T~~gnpl~~aaala~L--~~i~~--e~l~~~~~~~g~~l~~~L~~l~~~~~~i 325 (397)
T TIGR03246 252 GGFPIGAMLTT-T-EIAAHLKVGTHGTTYGGNPLACAVAGKVL--DLVNT--PELLAGVKQRHDLFVDGLEKINARYNVF 325 (397)
T ss_pred CCCEEEEEEEC-H-HHHHHCCCCCCCCCCCCCHHHHHHHHHHH--HHHHH--CCHHHHHHHHHHHHHHHHHHHHHHCCCE
T ss_conf 88404899744-8-88865187773866882999999999999--99985--4799999999999999999987417987
Q ss_pred CCCCCCCEEE-ECCCCC-CCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 4588898126-316655-67679999988856718803789989999888985122466673079998999999999999
Q gi|254780349|r 316 SGGTDNHLML-VDLRSK-RMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQ 393 (433)
Q Consensus 316 ~ggTd~H~vl-vdl~~~-~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~ 393 (433)
..---.-+++ +++... .-...+....+-+.|+++-... ++-||+- |.+| +.++|+.++-+.+.+
T Consensus 326 ~~VRG~Glm~giel~~~~~~~a~~i~~~~~~~Gll~~~~g----------~n~lrl~-PPL~---it~eeid~~l~~l~~ 391 (397)
T TIGR03246 326 SEIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALIAG----------PNVVRFA-PSLV---ISDDDIDEGLARFER 391 (397)
T ss_pred EEEEECCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEECC----------CCEEEEE-CCCC---CCHHHHHHHHHHHHH
T ss_conf 7542243599999727863359999999997892893079----------9979997-8851---899999999999999
Q ss_pred HHH
Q ss_conf 960
Q gi|254780349|r 394 ILD 396 (433)
Q Consensus 394 ~L~ 396 (433)
+|+
T Consensus 392 al~ 394 (397)
T TIGR03246 392 AIE 394 (397)
T ss_pred HHH
T ss_conf 999
No 241
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase; InterPro: IPR012703 Phosphonates are a class of organophosphorus compounds, characterised by a stable C-P bond, which are found in a variety of biologically produced molecules including antiobiotics, lipids, proteins and polysaccharides . The functions of these molecules include phosphorus storage, cell communication, host recognition and chemical warfare. 2-Aminoethylphosphonate (AEP), the most common naturally occurring phosphonate, is an important precursor used in the biosynthesis of phosphonolipids, phosphonoproteins, and phosphonoglycans. This entry represents 2-aminoethylphosphonate-pyruvate transaminase (AEPT)(2.6.1.37 from EC) which catalyses the interconversion of AEP and phosphonoacetaldehyde (P-Ald), coupled with the interconversion of pryuvate and L-alanine. In some bacterial species this is the first step in an AEP degradation pathway which allows them to utilise this compound as a source of carbon, nitrogen and phosphorus. Phosphonoacetaldeyhde hydrolase, often encoded by an adjacent gene, then converts P-Ald to acetaldehyde and phosphate.Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lyase complex as found in Escherichia coli. The crystal structure of AEPT from Salmonella typhimurium has been studied to 2.2 A resolution . The protein is a homodimer where each subunit is composed of two domains, large and small. The large domain forms an alpha-beta complex characteristic of the aspartate transaminase family, while the small domain is comosed of highly twisted beta strands. The active site contains a pyridoxal 5'-phosphate cofactor and is found at the domain interface, being composed of residues from both subunits..
Probab=98.74 E-value=1.8e-05 Score=58.67 Aligned_cols=322 Identities=16% Similarity=0.134 Sum_probs=219.4
Q ss_pred HCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH-HHHHHHHHHHHHHCCC---CC--EECCCHHHHHH
Q ss_conf 388810430102989999830510288657988875336006799-9999999999987188---63--01000016799
Q gi|254780349|r 34 DEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVD-DIENIAIERAKKLFNV---NF--VNVQSHSGSQM 107 (433)
Q Consensus 34 ~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d-~iE~la~~~a~~lF~a---~~--anvqp~SG~~A 107 (433)
.-|=|-|.==-+|..|++++--|++.==+| |=. -+|..+.++. +|-.+ +| +=.|- ||+-|
T Consensus 3 ~ylLLTPGPLtTs~~vk~aMl~D~CtWD~d------------Yn~~~~~~ir~~L~-~la~~~~~~YT~VllQG-SGtf~ 68 (366)
T TIGR02326 3 EYLLLTPGPLTTSKTVKEAMLVDWCTWDSD------------YNEDVVESIRQKLL-KLATAEEEKYTTVLLQG-SGTFA 68 (366)
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCCCHH------------HHHHHHHHHHHHHH-HHHHCCCCCEEEEEECC-CCHHH
T ss_conf 985357887630068888662104587155------------31367999999999-98606898546786127-51255
Q ss_pred HHHHHHHHHC-CCCEEEECCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC----CEEEEE
Q ss_conf 9999998315-487488123344841114766543--333322013665832356598999999986046----678970
Q gi|254780349|r 108 NQGVFLALMH-PGDSFMGLSLDSGGHLTHGSSVNM--SGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNP----KLIIVG 180 (433)
Q Consensus 108 n~av~~ALl~-pGD~Il~~~l~~GGHlshg~~~~~--~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kP----klIi~G 180 (433)
--|++-+++. +.+|+|.+.=-.= |+...- .-....++.+..+ |+...+..++|++....+- .+|.|.
T Consensus 69 VEA~iGs~~pr~~~klLv~~NGAY-----G~R~~~ia~~l~i~~~~~~~~-E~~~~~~~~ve~~L~~dp~ItH~A~vHcE 142 (366)
T TIGR02326 69 VEAVIGSAVPRKDGKLLVVINGAY-----GKRIAQIAEYLQIPHHVVETE-ENEPTNVVEVEAILAADPAITHVALVHCE 142 (366)
T ss_pred HHHHHHCCCCCCCCEEEEEECCCH-----HHHHHHHHHHHCCCEEEEECC-CCCCCCHHHHHHHHHCCCCCEEEEEEECC
T ss_conf 566541124788973899717853-----478999999847861675158-77777889999998518971278898367
Q ss_pred CCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC----CCEEEECCCCCCCCCCC-EEEEECCCCHHH
Q ss_conf 5524353637999988641797899186201244320001232200----23567404565225674-489833620565
Q gi|254780349|r 181 GTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH----CHIVTTTTHKSLRGPRG-GLIMTNHADLAK 255 (433)
Q Consensus 181 ~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~----ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~ 255 (433)
.|. .-.=|++.+..+++++|-.+++|+==..|=| |++- .|.+-+|..|=+.|-.| |+|+.+..++.+
T Consensus 143 TtT-GiLNPi~~~~~~~~~hGk~~ivDAMSSfGgi-------~idi~~l~~D~LIssanKCi~GVPGfgFviA~~~~L~~ 214 (366)
T TIGR02326 143 TTT-GILNPIEAVAKVAKRHGKVTIVDAMSSFGGI-------PIDIAELDIDYLISSANKCIQGVPGFGFVIAKQAELEK 214 (366)
T ss_pred CCC-CCCCHHHHHHHHHHHCCCEEEEECCCCCCCC-------HHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 526-6211289999999855977998534113760-------01164325676352347813376843667768999986
Q ss_pred HCCHHHC------------------HHHHHHHHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHCCCCCC-
Q ss_conf 0166465------------------432234455666899999999735648-99999999888999999861685233-
Q gi|254780349|r 256 KINSAIF------------------PGLQGGPFMHSIAAKAVAFGEALSSEF-RDYAKQIVLNSQALAKKLQFLGFDIV- 315 (433)
Q Consensus 256 ~i~~avf------------------Pg~qg~~~~~~iaa~aval~Ea~~~~f-~~Ya~qvv~NA~~La~~L~~~G~~vv- 315 (433)
.=+++-- |.. . +--|.+.|++.||.|-.++.+ .+-.++--.|-+.|...|.+.||+.+
T Consensus 215 ~~g~arSLsLDLydQw~~M~~~~GkWRF-T-sPTHvV~Af~qAL~el~~EGGv~aR~~RY~~nq~~L~~~m~~LGF~~ll 292 (366)
T TIGR02326 215 CAGNARSLSLDLYDQWECMEKQHGKWRF-T-SPTHVVHAFAQALLELEKEGGVEARYQRYQSNQKLLVAGMRALGFEPLL 292 (366)
T ss_pred HCCCCCHHHHHHHHHHHHHHCCCCCEEE-C-CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 2043210235489999996448996221-7-7268999999999999845897457899999999999999861551147
Q ss_pred CCCCCCCEEEEC--CCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 458889812631--665567679999988856718803789989999888985122466673079998999999999999
Q gi|254780349|r 316 SGGTDNHLMLVD--LRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQ 393 (433)
Q Consensus 316 ~ggTd~H~vlvd--l~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~ 393 (433)
..--.+-++.-= -+.....-+++.++|.+-|.++- ||. -..-.--|||+- =-..+.||+++-..|.+
T Consensus 293 ~~~~~sPIItsF~~P~~~~y~F~~fY~~lk~~GFviY----PGK---vs~~~~FRiG~I----G~V~~~di~~l~~~I~~ 361 (366)
T TIGR02326 293 DDELQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIY----PGK---VSQVDTFRIGNI----GDVDAADIERLVTAIGK 361 (366)
T ss_pred CHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEC----CCC---CCCCCCEECCCC----CCCCHHHHHHHHHHHHH
T ss_conf 5434588689850778897138999999976781762----761---045662111676----76388999999999998
Q ss_pred HHH
Q ss_conf 960
Q gi|254780349|r 394 ILD 396 (433)
Q Consensus 394 ~L~ 396 (433)
++.
T Consensus 362 ~~~ 364 (366)
T TIGR02326 362 ALY 364 (366)
T ss_pred HHH
T ss_conf 750
No 242
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.74 E-value=3.8e-05 Score=56.34 Aligned_cols=253 Identities=14% Similarity=0.143 Sum_probs=150.8
Q ss_pred CCCCCHHHH--HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH--HHHHHHHCCCCCEECCCHHHHH-HHHHHHHHHH
Q ss_conf 010298999--9830510288657988875336006799999999--9999987188630100001679-9999999831
Q gi|254780349|r 42 ENIVSRAVL--EAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIA--IERAKKLFNVNFVNVQSHSGSQ-MNQGVFLALM 116 (433)
Q Consensus 42 EN~~S~~v~--~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la--~~~a~~lF~a~~anvqp~SG~~-An~av~~ALl 116 (433)
..++++.|. -...|.|..-|.- |+------++|.|- +...++|.|.+-||.-.+-+.. +.-|+.+|.-
T Consensus 86 ~~~~P~vI~rnile~pewyTaYTP-------YQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r 158 (450)
T COG0403 86 DTYTPPVILRNILENPEWYTAYTP-------YQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKR 158 (450)
T ss_pred CCCCCHHHHHHHHCCCCCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 871827888876438542236788-------8636665799999989999999858874450023167699999999987
Q ss_pred --C-CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCC-CC-CCCCHH
Q ss_conf --5-487488123344841114766543333322013665832356598999999986046678970552-43-536379
Q gi|254780349|r 117 --H-PGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTA-YS-RVWDWE 191 (433)
Q Consensus 117 --~-pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~-y~-~~~d~~ 191 (433)
+ +.++++...-.+--|++-- .--..+..++++-++.+ |.+.+++. +...---|++-+.. |. ...|++
T Consensus 159 ~~k~k~~~~~V~~~vhpqt~~Vl-~Tra~~~g~~i~~~~~~------d~~~l~~~-~~~~~~gv~vQyP~~~G~~~~d~~ 230 (450)
T COG0403 159 VTKKKRNKFLVPKDVHPQTLDVL-RTRAEGLGIEIEVVDAD------DLDDLESA-DDGDVFGVLVQYPNTFGIVEEDLR 230 (450)
T ss_pred HHCCCCCEEEECCCCCHHHHHHH-HHHCCCCCEEEEEECCC------HHHHHHHC-CCCCEEEEEEECCCCCCCCCHHHH
T ss_conf 41476734996688687799999-86112576399995642------25566532-467737999976888773414099
Q ss_pred HHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCC-----CCCCCCCCEEEEECCCCHHHHC--------
Q ss_conf 99988641797899186201244320001232200-235674045-----6522567448983362056501--------
Q gi|254780349|r 192 RFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTH-----KSLRGPRGGLIMTNHADLAKKI-------- 257 (433)
Q Consensus 192 ~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTH-----Ktl~GPrgGiI~~~~~e~~~~i-------- 257 (433)
.+.+++++.|+++++ .+-++|=++...|=++ |||+.++++ -.|.||.-|+.-+++ ++..++
T Consensus 231 ~l~~~~h~~~al~~v----~aDplaL~LL~pPGe~GADIvvG~~QrfGvPmgfGGPhag~fA~~~-~~~R~mPGRlVG~S 305 (450)
T COG0403 231 ALIEAAHSAGALVIV----AADPLALGLLKPPGEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKD-EFKRQMPGRLVGVS 305 (450)
T ss_pred HHHHHHHHCCCEEEE----EECHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEHH-HHHHCCCCCEEEEE
T ss_conf 999998635977999----8263676455784103786697337604777678875632223758-67425998433046
Q ss_pred ----------------------CHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHH--HCCC
Q ss_conf ----------------------66465432234455666899999999735648-9999999988899999986--1685
Q gi|254780349|r 258 ----------------------NSAIFPGLQGGPFMHSIAAKAVAFGEALSSEF-RDYAKQIVLNSQALAKKLQ--FLGF 312 (433)
Q Consensus 258 ----------------------~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f-~~Ya~qvv~NA~~La~~L~--~~G~ 312 (433)
++|.-.-...--++..+|+....+. -|.+ ++-|.|+.+.+..|++.|. ..|+
T Consensus 306 ~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~h---Gp~GLk~iA~r~~~~a~~la~~L~~~~~g~ 382 (450)
T COG0403 306 VDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYH---GPQGLKEIAERIHRLAAYLAAGLKEIGAGV 382 (450)
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 45899803201287788887640010155489999999999999986---968899999999999999999876458864
Q ss_pred CCCCC
Q ss_conf 23345
Q gi|254780349|r 313 DIVSG 317 (433)
Q Consensus 313 ~vv~g 317 (433)
.++..
T Consensus 383 ~~~~~ 387 (450)
T COG0403 383 ELVFD 387 (450)
T ss_pred EECCC
T ss_conf 75142
No 243
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=98.71 E-value=1.2e-05 Score=59.78 Aligned_cols=258 Identities=15% Similarity=0.179 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHH--HCCCCEEEECCCCCCCCCCCCCC---CCCCCCCCCCCCC-CCCCCCCCC---CHHHHHHHHHHH
Q ss_conf 01679999999983--15487488123344841114766---5433333220136-658323565---989999999860
Q gi|254780349|r 102 HSGSQMNQGVFLAL--MHPGDSFMGLSLDSGGHLTHGSS---VNMSGKWFKAIPY-NVRKEDGLL---DMHEIESLAIEY 172 (433)
Q Consensus 102 ~SG~~An~av~~AL--l~pGD~Il~~~l~~GGHlshg~~---~~~~g~~~~~~~y-~~d~~~~~I---D~d~~~~~a~~~ 172 (433)
.||+-|+.+++..- .....+|+++.-.. ||.. .+.++.......| +..+....+ |.+++++... .
T Consensus 93 ~sGsEAve~AiklAr~~tgr~~ii~~~~~y-----HG~T~ga~s~t~~~~~~~~~~~~~~~~~~~p~~d~~~l~~~~~-~ 166 (377)
T PRK02936 93 NSGAEANEAALKLARKHTGKSKIVTFEQSF-----HGRTFGTMSATGQEKIKEGFGPLLPGFLHVPFNDIKALEEVMN-E 166 (377)
T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEEECCCC-----CCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHCCC-C
T ss_conf 877789999999988755998799987855-----1144320010587433457789999814467458999985168-9
Q ss_pred CCCEEEEE----C-CCCCCC-CCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCCC-CCC-CCEEEECCCCCCCC--C
Q ss_conf 46678970----5-524353-637999988641797899186201244-320001232-200-23567404565225--6
Q gi|254780349|r 173 NPKLIIVG----G-TAYSRV-WDWERFRSIADSIGAYLMADISHISGL-VVGGQHPSP-VPH-CHIVTTTTHKSLRG--P 241 (433)
Q Consensus 173 kPklIi~G----~-S~y~~~-~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~P-l~~-ADvvt~sTHKtl~G--P 241 (433)
+..-||+. . -.++-+ -=++++|++|+++|++|++|.-++ |+ =.|..|-.- +.- .|+++.+ |.|.| |
T Consensus 167 ~iAavi~EPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~~a~e~~gv~PDii~~g--K~l~~G~P 243 (377)
T PRK02936 167 EVAAVMLEVVQGEGGVIPADLSFLQEVQTLCKKFGALLIIDEVQT-GIGRTGTLFAYEQFGLEPDIVTVA--KGLGNGIP 243 (377)
T ss_pred CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCC-CCCCCCCCCHHHHCCCCCCEEEEE--HHHCCCCC
T ss_conf 678999978767889768999999999999998298457122112-776556720364449887678862--01027898
Q ss_pred CCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH------CCCCCC
Q ss_conf 74489833620565016646543223445566689999999973564899999999888999999861------685233
Q gi|254780349|r 242 RGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQF------LGFDIV 315 (433)
Q Consensus 242 rgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~------~G~~vv 315 (433)
=|+++. ++ ++.+.++....-.+.+|.-+...|++++ .+.++. .++++|++.+++.|.+ ..++.+
T Consensus 244 ~sav~~-~~-~i~~~~~~~~~~~T~~gnpl~~aaa~a~--L~~i~~------~~l~~~~~~~g~~l~~~L~~~~~~~~~i 313 (377)
T PRK02936 244 VGAMIG-KK-ELGSAFTAGSHGSTFGGNYLAMAAAKEV--LQVIKQ------PSFLEEVQEKGEYFLQKLQEELQHVECV 313 (377)
T ss_pred CCCEEC-CH-HHHHCCCCCCCCCCCCCCHHHHHHHHHH--HHHHHC------CHHHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 733303-28-7763037899888898599999999999--999851------1199999999999999999984369966
Q ss_pred CCCCCCCEEE-ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 4588898126-316655676799999888567188037899899998889851224666730799989999999999999
Q gi|254780349|r 316 SGGTDNHLML-VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQI 394 (433)
Q Consensus 316 ~ggTd~H~vl-vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~ 394 (433)
.+-.-.-+++ +++.. +..+..+.|.+.|+++... . ++-||+. |.+| +.++|++++-+++.++
T Consensus 314 ~~vRG~Gl~~gie~~~---~~~~~~~~~~~~Gll~~~~----g------~~~ir~~-PpL~---it~~ei~~~l~~l~~a 376 (377)
T PRK02936 314 KNIRGKGLMIGIECTH---EVAPFIEQLREEGLLVLQA----G------PNVIRLL-PPLI---VTKEELDQAVYMLKKV 376 (377)
T ss_pred EEEEECCEEEEEEECC---CHHHHHHHHHHCCEEEEEC----C------CCEEEEE-CCCC---CCHHHHHHHHHHHHHH
T ss_conf 7712556999999778---5999999999699299436----8------9989996-9902---8899999999999986
Q ss_pred H
Q ss_conf 6
Q gi|254780349|r 395 L 395 (433)
Q Consensus 395 L 395 (433)
|
T Consensus 377 L 377 (377)
T PRK02936 377 L 377 (377)
T ss_pred C
T ss_conf 9
No 244
>PRK08354 putative aminotransferase; Provisional
Probab=98.70 E-value=4.3e-05 Score=55.98 Aligned_cols=291 Identities=15% Similarity=0.156 Sum_probs=158.1
Q ss_pred HHHCCCCCCCCCCCCH-HHHHHHHCCCC--CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHH
Q ss_conf 9838881043010298-99998305102--88657988875336006799999999999998718863010000167999
Q gi|254780349|r 32 QNDEIQLIASENIVSR-AVLEAQGSILT--NKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMN 108 (433)
Q Consensus 32 q~~~l~LiASEN~~S~-~v~~~l~S~l~--nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An 108 (433)
..+-|-|-+.||...| .+.+++...+. ++| | + .++ |. +...+.+| .++-...|+.--
T Consensus 7 ~~~iidfssN~NP~~P~~~~~~~~~~~~~~~~Y----P---~------~~~---L~-~~la~~~g---~~i~~~~Gs~e~ 66 (312)
T PRK08354 7 REGLIDFSASVNPYPPEWLDEMFERAVEISGRY----T---Y------YEW---LE-EEFSKLFG---EPITITAGITEA 66 (312)
T ss_pred HHHCEEECCCCCCCCCHHHHHHHHHHHHHHCCC----C---C------HHH---HH-HHHHHHHC---CCEEECCCHHHH
T ss_conf 664166079999999729999999605640049----9---9------899---99-99988768---796992679999
Q ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--C
Q ss_conf 99999831548748812334484111476654333332201366583235659899999998604667897055243--5
Q gi|254780349|r 109 QGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--R 186 (433)
Q Consensus 109 ~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~ 186 (433)
+..+..+.-+||+|+.+....+-+-- .....|. +++. ...|++.+++.++ ++++|++.....| .
T Consensus 67 i~~l~~~~~~~~~vl~~~Ptf~~Y~~---~a~~~g~--~v~~-------~~~d~~~l~~~~~--~~~~v~l~nPNNPTG~ 132 (312)
T PRK08354 67 LYLIGILALRDRKVIIPRHTYGEYER---VARFFAA--RIIK-------GPNDPEKLEELVE--KNSVVFFCNPNNPDGK 132 (312)
T ss_pred HHHHHHHHCCCCEEEEECCCHHHHHH---HHHHCCC--EEEE-------CCCCHHHHHHHHC--CCCEEEEECCCCCCCC
T ss_conf 99999997698989993599999999---9998698--7873-------5999899986304--8988999689898678
Q ss_pred CCCHHHHHHHHH---HCCCEEEECCCCHHHHHHHHCCCCCCCCCC-EEEECCCCC--CCCCCCEEEEECCCCHHHHCCHH
Q ss_conf 363799998864---179789918620124432000123220023-567404565--22567448983362056501664
Q gi|254780349|r 187 VWDWERFRSIAD---SIGAYLMADISHISGLVVGGQHPSPVPHCH-IVTTTTHKS--LRGPRGGLIMTNHADLAKKINSA 260 (433)
Q Consensus 187 ~~d~~~l~eIa~---~~ga~l~~D~aH~~GLIa~g~~~~Pl~~AD-vvt~sTHKt--l~GPrgGiI~~~~~e~~~~i~~a 260 (433)
.++-+++.++++ ..++++++|.|- .-++-.... ..+-+ +|+-|.-|+ |+|=|=|.++++. +..+++.
T Consensus 133 ~~~~~~l~~l~~~~~~~~~~vvvDEAY-~ef~~~~~~---~~~~nlivlrS~SK~~glaGlRlGy~i~~~-e~i~~~r-- 205 (312)
T PRK08354 133 YYNFKELAPLIDAVEDKNVLLILDEAF-IDFVKKAES---PEGENIIKLRTFTKSYGVPGIRVGYVKGFE-EAFRSVR-- 205 (312)
T ss_pred CCCHHHHHHHHHHCCCCCCEEEEECHH-HHHCCCCCC---CCCCCEEEEEECCHHHCCCCHHHHHHHCCH-HHHHHHC--
T ss_conf 689899999998647778489974047-773676334---777988999746264357404343662789-9999863--
Q ss_pred HCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHH
Q ss_conf 65432234455666899999999735648999999998889999998616852334588898126316655676799999
Q gi|254780349|r 261 IFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAES 340 (433)
Q Consensus 261 vfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~ 340 (433)
-|- ..+.+|..+. ..++...+ +|.++.++--+.--+.|. ++..+ -+++.-+|+++. +..+..+
T Consensus 206 -~p~-----~vn~~a~~~~--~~~l~d~~-~~~~~~~~~~~~er~~l~--~~~~~--~s~aNFil~~~~----~a~~~~~ 268 (312)
T PRK08354 206 -MPW-----GIGSLGYAFL--EFLLEDNF-EHLKKTLPLIWREKERFE--KFLYV--KSDANFFIKDVG----DAEKFVE 268 (312)
T ss_pred -CCC-----CCCHHHHHHH--HHHHHHHH-HHHHHHHHHHHHHHHHHH--CCCCC--CCCCCEEEEECC----CHHHHHH
T ss_conf -898-----8749999999--99988169-999999999999999995--62368--996738998779----9999999
Q ss_pred HHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 88856718803789989999888985122466673079998999999999999
Q gi|254780349|r 341 ILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQ 393 (433)
Q Consensus 341 ~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~ 393 (433)
.|.+.||.+-...=.+ .+.-+||..- .++|++.+-+-+.+
T Consensus 269 ~L~~~gIlVR~~~~fg------l~~~iRisvg-------~~een~~li~aLke 308 (312)
T PRK08354 269 FLKRNGILVRDCTSFG------LPGYVRFSVR-------DREENEKLLNALRE 308 (312)
T ss_pred HHHHCCEEEEECCCCC------CCCEEEEECC-------CHHHHHHHHHHHHH
T ss_conf 9983991999689999------9998999719-------99999999999998
No 245
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=98.68 E-value=2.7e-05 Score=57.37 Aligned_cols=266 Identities=17% Similarity=0.209 Sum_probs=132.5
Q ss_pred CHHHHHHHHHHHHHHH-------CCC-CEEEECCCCCCCCCCCCCCCCCCC-----C-------CCCCCCCCCCCCCC--
Q ss_conf 0016799999999831-------548-748812334484111476654333-----3-------32201366583235--
Q gi|254780349|r 101 SHSGSQMNQGVFLALM-------HPG-DSFMGLSLDSGGHLTHGSSVNMSG-----K-------WFKAIPYNVRKEDG-- 158 (433)
Q Consensus 101 p~SG~~An~av~~ALl-------~pG-D~Il~~~l~~GGHlshg~~~~~~g-----~-------~~~~~~y~~d~~~~-- 158 (433)
.-||+-||.+++.... +|+ .+|+++.-..=| .|.|. .++++ . ....+||+.++...
T Consensus 111 ~~SGsEA~E~AiKlAr~y~~~~g~~~r~~ii~~~~syHG-~t~ga-~s~sg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 188 (441)
T PRK13360 111 TNSGSESVDTALKIALAYHRARGQGQRTRLIGRERGYHG-VGFGG-ISVGGIAPNRKAFGALLPGVDHLPHTLDLARNAF 188 (441)
T ss_pred ECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC-CCCCC-CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
T ss_conf 487899999999999999886099872289932786279-88465-5355887544567788998513588764222433
Q ss_pred -------CCC-HHHHHHHHHHHCCC---EEEE----ECC-CCCCC-CCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCC
Q ss_conf -------659-89999999860466---7897----055-24353-637999988641797899186201244-320001
Q gi|254780349|r 159 -------LLD-MHEIESLAIEYNPK---LIIV----GGT-AYSRV-WDWERFRSIADSIGAYLMADISHISGL-VVGGQH 220 (433)
Q Consensus 159 -------~ID-~d~~~~~a~~~kPk---lIi~----G~S-~y~~~-~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~ 220 (433)
..+ .+++++++....|+ -||+ |.. ..+-| -=++++|++|+++|++|++|.-++ |+ =.|..|
T Consensus 189 ~~~~~~~~~~~~~~le~~~~~~~~~~iAAii~EPiqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~t-G~GRTG~~f 267 (441)
T PRK13360 189 SKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVIT-GFGRLGAPF 267 (441)
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCC-CCCCCCCCC
T ss_conf 4575256799999999999854988579999777667789523899999999999863595577201312-686235671
Q ss_pred CC-CCCC-CCEEEECCCCCCC-C--CCCEEEEECCCCHHHHCCHH---H--C-H-HHHHHHHHHHHHHHHHHHHHHHCHH
Q ss_conf 23-2200-2356740456522-5--67448983362056501664---6--5-4-3223445566689999999973564
Q gi|254780349|r 221 PS-PVPH-CHIVTTTTHKSLR-G--PRGGLIMTNHADLAKKINSA---I--F-P-GLQGGPFMHSIAAKAVAFGEALSSE 288 (433)
Q Consensus 221 ~~-Pl~~-ADvvt~sTHKtl~-G--PrgGiI~~~~~e~~~~i~~a---v--f-P-g~qg~~~~~~iaa~aval~Ea~~~~ 288 (433)
-. -+.- .|+||.+ |.|. | |=++++.+ + ++.+.+... . | - .+.+|.-+...||+|+- +.++.
T Consensus 268 a~e~~gv~PDiv~~g--Kgl~gG~~Plsav~~~-~-~i~~~~~~~~~~~~~~~hg~T~~Gnplacaaa~a~L--~~i~~- 340 (441)
T PRK13360 268 AAQYFGVTPDLLTCA--KGLTNGAIPMGAVFVS-S-EIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATL--DLYER- 340 (441)
T ss_pred EECCCCCCCCEEEEC--CHHHCCCCCCCEEEEC-H-HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH--HHHHH-
T ss_conf 001689878789977--2321787343225524-9-999743369755542113677788989999999999--99997-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCC------CCCCCCEEE-ECCCCC-CCC---HHHHHHHHHHCCEEEECCCCCCC
Q ss_conf 8999999998889999998616852334------588898126-316655-676---79999988856718803789989
Q gi|254780349|r 289 FRDYAKQIVLNSQALAKKLQFLGFDIVS------GGTDNHLML-VDLRSK-RMT---GKRAESILGRVSITCNKNSIPFD 357 (433)
Q Consensus 289 f~~Ya~qvv~NA~~La~~L~~~G~~vv~------ggTd~H~vl-vdl~~~-~~~---G~~a~~~Le~~gI~~Nkn~iP~D 357 (433)
.++++|++.+.+.|.++ +.-+. .-.-..+++ +++.+. +-. ..+....|-+.|+++...
T Consensus 341 -----e~l~~~~~~~g~~l~~~-L~~l~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~Gll~~~~----- 409 (441)
T PRK13360 341 -----EGLLTRAARLAPYWEDA-LHSLRDAPHVIDIRNLGLVGGIELAPRDGKPGKRAYEVFLKCFEKGLMIRYT----- 409 (441)
T ss_pred -----CCHHHHHHHHHHHHHHH-HHHHHCCCCEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEECC-----
T ss_conf -----48899999999999999-9986249986885155489999997888865489999999999699499317-----
Q ss_pred CCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 9998889851224666730799989999999999999602
Q gi|254780349|r 358 PESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 358 ~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
.+-||+. |.++ +.++|++++-+++.++|+.
T Consensus 410 ------gn~irl~-PPL~---it~~eid~~~~~l~~aL~e 439 (441)
T PRK13360 410 ------GDILALS-PPLI---IEEAQIDELFDIVAQALKE 439 (441)
T ss_pred ------CCEEEEE-CCEE---CCHHHHHHHHHHHHHHHHH
T ss_conf ------9989998-9920---8899999999999999995
No 246
>PRK06917 hypothetical protein; Provisional
Probab=98.68 E-value=2.3e-05 Score=57.88 Aligned_cols=298 Identities=17% Similarity=0.188 Sum_probs=141.0
Q ss_pred HHHHHHHHHHHHC-CCCCEECCCHHHHHHHHHHHHHHH-------CCC-CEEEECCCCCCCCCCCCCCCCCCCC------
Q ss_conf 9999999999871-886301000016799999999831-------548-7488123344841114766543333------
Q gi|254780349|r 80 IENIAIERAKKLF-NVNFVNVQSHSGSQMNQGVFLALM-------HPG-DSFMGLSLDSGGHLTHGSSVNMSGK------ 144 (433)
Q Consensus 80 iE~la~~~a~~lF-~a~~anvqp~SG~~An~av~~ALl-------~pG-D~Il~~~l~~GGHlshg~~~~~~g~------ 144 (433)
.|.||.+.+..+- +.+.+ .=.-||+-||.+++..-. .+| .+|+++.-..=|. |.| ..++++.
T Consensus 76 ~~~la~~l~~~~p~~~~~~-~f~~SGsEAvE~AiKlA~~y~~~r~~t~r~~Iis~~~syHG~-T~g-a~s~sg~~~~~~~ 152 (447)
T PRK06917 76 AEKLAKKLSDLSPGDLNWS-FFVNSGSEANETAMKIAIQHWQERGIQGKHKILSRWMSYHGI-TMG-ALSMSGHPLRRQR 152 (447)
T ss_pred HHHHHHHHHHHCCCCCCEE-EECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC-CCE-EEEECCCCCCCCC
T ss_conf 9999999998578887879-962878999999999999999983899984899950551466-660-3662388211478
Q ss_pred ------CCCC--CCCCCC----CCCC---CCCHHHHHHHHHHHCCC---EEEE----ECCC-CCCCCC--HHHHHHHHHH
Q ss_conf ------3220--136658----3235---65989999999860466---7897----0552-435363--7999988641
Q gi|254780349|r 145 ------WFKA--IPYNVR----KEDG---LLDMHEIESLAIEYNPK---LIIV----GGTA-YSRVWD--WERFRSIADS 199 (433)
Q Consensus 145 ------~~~~--~~y~~d----~~~~---~ID~d~~~~~a~~~kPk---lIi~----G~S~-y~~~~d--~~~l~eIa~~ 199 (433)
.+.. .||... .... .-..+.+++++++..|. -||+ |.+- +..|-+ ++++|++||+
T Consensus 153 ~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~Gg~~~p~~~yl~~lr~lc~~ 232 (447)
T PRK06917 153 FVSILEDYPTISAPYCYRCPVQKVYPTCQLACATELERSIERIGAEHIAAFIAEPIIGAAGGAVVPPKGYYKVIKDICSH 232 (447)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEECCCCCEECCHHHHHHHHHHHHH
T ss_conf 78878897744898655777776540358999999999999738877469997130305797164687899999999652
Q ss_pred CCCEEEECCCCHHHH-HHHHCCCC-CCCC-CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCCHHH---CHH-HHHHH
Q ss_conf 797899186201244-32000123-2200-23567404565225---674489833620565016646---543-22344
Q gi|254780349|r 200 IGAYLMADISHISGL-VVGGQHPS-PVPH-CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKINSAI---FPG-LQGGP 269 (433)
Q Consensus 200 ~ga~l~~D~aH~~GL-Ia~g~~~~-Pl~~-ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~av---fPg-~qg~~ 269 (433)
+|++|++|.-++ |+ =.|..|-. -+.- .|++|. -|.|.| |=++++.. + ++.+.+...- +-| +.++.
T Consensus 233 ~gillI~DEV~t-GfGRtG~~fa~e~~gv~PDii~~--gK~l~gG~~Pl~av~~~-~-~i~~~~~~g~~~~~~g~Tf~gn 307 (447)
T PRK06917 233 YDILFIADEVMT-GLGRTGAWFAMEHWGVEPDIMTL--GKGLGAGYTPMAATVVS-D-RVMEPILRGSRSVMSGHTLSAN 307 (447)
T ss_pred CCCEEEEEECEE-CCCCCCCCCHHHHCCCCCCEEEE--CHHHCCCCCCEEEEEEC-H-HHHHHHCCCCCCCCCCCCCCCC
T ss_conf 695289741100-78756874315335989778977--40111898773899881-8-9886540588762017789899
Q ss_pred HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCEEE-ECCC-C----C--CCCH---H
Q ss_conf 55666899999999735648999999998889999998616--852334588898126-3166-5----5--6767---9
Q gi|254780349|r 270 FMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL--GFDIVSGGTDNHLML-VDLR-S----K--RMTG---K 336 (433)
Q Consensus 270 ~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~--G~~vv~ggTd~H~vl-vdl~-~----~--~~~G---~ 336 (433)
.+..-||+|+- +.++.+ ...+++-+..+.|.+.|.+. .++++..-.-.-+++ |++. + . .-+. .
T Consensus 308 pla~aaa~a~L--~~l~~~--~l~~~~~~~G~~l~~~L~~l~~~~~~i~dVRG~GLm~giel~~d~~~~~~~~~~~~~a~ 383 (447)
T PRK06917 308 PLSAATALAVI--EYMEKH--NLPEKTAEKGEYLIKGLQEVQQQSTIIGDVRGKGLLIGVEFVADQKTKKPFPQPFSKAS 383 (447)
T ss_pred HHHHHHHHHHH--HHHHHC--CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCCCCCCCHHHHH
T ss_conf 99999999999--999864--59999999999999999999863997787651561699998426655677872489999
Q ss_pred HHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 999988856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 337 RAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 337 ~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
.+.+.+-+.|+++-.... + ......+.|||.-|-+ ..++|++++-+.+.++|+
T Consensus 384 ~i~~~~~~~Gll~~~~~~-~--~~g~~~~~lrl~PPL~----it~~eid~~i~~l~~al~ 436 (447)
T PRK06917 384 ELISVAAKNGLLLYPAVS-G--QAGKEGSALLIAPPMT----TTYSELDELLSIFAKSVE 436 (447)
T ss_pred HHHHHHHHCCCEEEECCC-C--CCCCCCCEEEEECCCC----CCHHHHHHHHHHHHHHHH
T ss_conf 999999978988987445-6--7789999899979922----789999999999999999
No 247
>PRK04612 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional
Probab=98.67 E-value=3.5e-05 Score=56.65 Aligned_cols=270 Identities=19% Similarity=0.211 Sum_probs=131.7
Q ss_pred HHHHHHHHHHHHHHH-------CCCCE--EEECCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCHHHHHHHHH-
Q ss_conf 016799999999831-------54874--8812334484111476654333332201366-583235659899999998-
Q gi|254780349|r 102 HSGSQMNQGVFLALM-------HPGDS--FMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN-VRKEDGLLDMHEIESLAI- 170 (433)
Q Consensus 102 ~SG~~An~av~~ALl-------~pGD~--Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~-~d~~~~~ID~d~~~~~a~- 170 (433)
-||+-||.+++.-.- +|.++ |+++.-..-|+. ....+.++.-.....|. +-.....+|++.++.+..
T Consensus 105 ~SGsEAvE~AlKlAr~y~~~~G~~~~k~~ii~~~~syHG~t--~~als~t~~~~~~~~~~p~p~~~~~~~~~d~~~le~~ 182 (408)
T PRK04612 105 NSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRT--LASVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAA 182 (408)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC--CCEECCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHH
T ss_conf 87468999999999999873288777769999858525987--6742256784334688899885254366749999971
Q ss_pred --HHCCCEEEEE------CCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCC-CCC-CCCEEEECCCCCCC
Q ss_conf --6046678970------5524353637999988641797899186201244-32000123-220-02356740456522
Q gi|254780349|r 171 --EYNPKLIIVG------GTAYSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPS-PVP-HCHIVTTTTHKSLR 239 (433)
Q Consensus 171 --~~kPklIi~G------~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~-Pl~-~ADvvt~sTHKtl~ 239 (433)
..+..-||+. +...+-+-=+++++++||++|++|++|.-++ |+ =.|..|-. -+. ..|++|.+ |.|.
T Consensus 183 ~~~~~iAAvivEPi~g~gG~~~~~~~yl~~l~~lc~~~gillI~DEV~T-GfGRtG~~fa~~~~~v~PDii~~g--Kglg 259 (408)
T PRK04612 183 MAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQC-GMGRTGTLFAHWQEQVTPDIVTLA--KALG 259 (408)
T ss_pred CCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCC-CCCCCCCHHHHHHCCCCCCEEEEE--HHHC
T ss_conf 5699789999978678888306899999999999975694698501224-788676203555128999989972--3223
Q ss_pred C--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--CCCCC
Q ss_conf 5--6744898336205650166465432234455666899999999735648999999998889999998616--85233
Q gi|254780349|r 240 G--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL--GFDIV 315 (433)
Q Consensus 240 G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~--G~~vv 315 (433)
| |=++++..+ ++.+.++......+.+|..+...|++++- +.++. .....++-+..+.|.+.|.+. .++++
T Consensus 260 ~G~Pl~av~~~~--~i~~~~~~~~h~~T~~gnpla~aaala~L--~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i 333 (408)
T PRK04612 260 GGFPIGAMLAGP--KVAETMQFGAHGTTFGGNPLAAAVARVAL--RKLAS--PQIAANVARQSAALRAGLEALNAEFGVF 333 (408)
T ss_pred CCCCEEEEEECH--HHHHHCCCCCCCCCCCCCHHHHHHHHHHH--HHHHH--CCHHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 887628999868--88851468997888873599999999999--99986--6699999999999999999987407988
Q ss_pred CCCCCCCEEE-ECCC--CCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 4588898126-3166--556767999998885671880378998999988898512246667307999899999999999
Q gi|254780349|r 316 SGGTDNHLML-VDLR--SKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIA 392 (433)
Q Consensus 316 ~ggTd~H~vl-vdl~--~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~ 392 (433)
..---.-+++ +.+. ..+..+. ..+.+-+.|+++-+ .. ++-||+- |++| +.++|+++.-+.+.
T Consensus 334 ~~vRG~GLm~giel~~~~~~~~~~-i~~~~~~~Gll~~~----~g------~~~irl~-PPL~---it~~eide~l~~l~ 398 (408)
T PRK04612 334 AQIRGRGLMLGAVLAPAHAGQAGA-ILDLAAEHGLLLLQ----AG------PDVLRFV-PALN---LTDAELADGLARLR 398 (408)
T ss_pred EEECCCCEEEEEEECCCCCCHHHH-HHHHHHHCCCEEEC----CC------CCEEEEE-CCCC---CCHHHHHHHHHHHH
T ss_conf 832204469999954788626999-99999978919931----79------9979996-8833---88999999999999
Q ss_pred HHHHC
Q ss_conf 99602
Q gi|254780349|r 393 QILDG 397 (433)
Q Consensus 393 ~~L~~ 397 (433)
++|..
T Consensus 399 ~al~~ 403 (408)
T PRK04612 399 LALAA 403 (408)
T ss_pred HHHHH
T ss_conf 99999
No 248
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases; InterPro: IPR005958 This entry describes tyrosine aminotransferase (2.6.1.5 from EC) as found in animals and Trypanosoma cruzi (Euglenozoa). It is the first enzyme of a pathway of tyrosine degradation via homogentisate. L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway are included in this family. ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding, 0006519 amino acid and derivative metabolic process.
Probab=98.67 E-value=1.4e-06 Score=66.35 Aligned_cols=300 Identities=20% Similarity=0.205 Sum_probs=201.2
Q ss_pred CCHHHHHHHHCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHHH---------HHHCCCCCEECCCHH-HHHHHHHHH
Q ss_conf 298999983051028865--79888753360067999999999999---------987188630100001-679999999
Q gi|254780349|r 45 VSRAVLEAQGSILTNKYA--EGYPSKRYYGGCQYVDDIENIAIERA---------KKLFNVNFVNVQSHS-GSQMNQGVF 112 (433)
Q Consensus 45 ~S~~v~~~l~S~l~nkya--eG~pg~ryy~G~~~~d~iE~la~~~a---------~~lF~a~~anvqp~S-G~~An~av~ 112 (433)
.-.+|.+++.|-..|=|| -|+|-+| +..|.-.. ..-+.++ ||-.-| |++|-..++
T Consensus 60 a~~Av~~al~Sg~~NgYap~~G~~~AR-----------~AvA~y~~~sfvhn~~~~~~l~a~--DV~ltsGCsqAIe~~I 126 (424)
T TIGR01265 60 AEEAVKDALRSGKFNGYAPSVGALAAR-----------EAVAEYLSNSFVHNQRLPGKLSAD--DVVLTSGCSQAIEIVI 126 (424)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCHHHHH-----------HHHHHHHHCCEEECCCCCCCCCCC--CEEEECCCHHHHHHHH
T ss_conf 999999998347856766436867888-----------999999662221257888875766--4488477226899999
Q ss_pred HHHH-CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCC-CCCCHHHHHHHHHHHCCCEEEE-----ECCCC
Q ss_conf 9831-5487488123344841114766543333322013665-8323-5659899999998604667897-----05524
Q gi|254780349|r 113 LALM-HPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNV-RKED-GLLDMHEIESLAIEYNPKLIIV-----GGTAY 184 (433)
Q Consensus 113 ~ALl-~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~-d~~~-~~ID~d~~~~~a~~~kPklIi~-----G~S~y 184 (433)
.||. .||+-||.+....==+ ..-+.....++..|++ -+|+ .+||+|++|.++++..--|||. .+|+|
T Consensus 127 ~aLA~~pG~NILvPRPGfP~Y-----~t~A~~~~lEvr~ydLdlPe~~WeiDL~~le~l~DekT~A~vv~NP~NPCGsVF 201 (424)
T TIGR01265 127 EALAQNPGANILVPRPGFPLY-----DTRAAFSGLEVRLYDLDLPEKDWEIDLDGLESLADEKTVAIVVINPSNPCGSVF 201 (424)
T ss_pred HHHHCCCCCCEECCCCCCCCH-----HHHHHHCCCCCCCCCCCCCCCCCEECHHHHHHHHCCCCEEEEEECCCCCCCCCC
T ss_conf 997268988355687778668-----999977187200024678887523647899876326876999847566788887
Q ss_pred CCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCC-CCC-CCCC-------EEEECCCCCCC--CCCCEEEEECC-CC
Q ss_conf 3536379999886417978991862012443200012-322-0023-------56740456522--56744898336-20
Q gi|254780349|r 185 SRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHP-SPV-PHCH-------IVTTTTHKSLR--GPRGGLIMTNH-AD 252 (433)
Q Consensus 185 ~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~-~Pl-~~AD-------vvt~sTHKtl~--GPrgGiI~~~~-~e 252 (433)
.+.+ ++++.++|++.|..+++|.= +-.+|-+|.=| +|| +-|+ ++.+++-|.+- |=|=|=|...| ..
T Consensus 202 ~~~H-L~k~~~~A~kl~i~iIADEi-Y~~~Vf~dkDPn~~F~p~a~f~~~VPvl~lGgisKrW~VPGWRlGWi~~~Dp~g 279 (424)
T TIGR01265 202 SRDH-LEKIAEVARKLGIPIIADEI-YGHLVFGDKDPNAPFVPMASFASIVPVLSLGGISKRWVVPGWRLGWIIVHDPHG 279 (424)
T ss_pred CHHH-HHHHHHHHHHHCCCEEEEEE-CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHCCCCCCCCEEEEEEEECCCC
T ss_conf 8888-99999999870982687763-164144889788862230035786886886310112327762243277888877
Q ss_pred HHHH--CCHHHCHHHHHHHHHHHHHHHH--HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCEEE--
Q ss_conf 5650--1664654322344556668999--99999735648999999998889999998616-852334588898126--
Q gi|254780349|r 253 LAKK--INSAIFPGLQGGPFMHSIAAKA--VAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHLML-- 325 (433)
Q Consensus 253 ~~~~--i~~avfPg~qg~~~~~~iaa~a--val~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~vl-- 325 (433)
+.+. +-.++--..|-.+.+++|.-=| -.|.+.-+++|..--+-+-+||-...+.|.+- |+..+.--.=+=-++
T Consensus 280 i~~~~k~~~gl~~~~~~~~gP~Ti~QgALP~IL~~Tp~efF~~~~~~lk~na~l~y~~L~~ipg~~c~~KP~G~MY~mvk 359 (424)
T TIGR01265 280 ILRDTKVLQGLKNVLQLILGPATIVQGALPDILENTPQEFFDKKISVLKENAELCYEELKDIPGLTCPKKPEGSMYLMVK 359 (424)
T ss_pred CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHH
T ss_conf 54444033898998423478157899999999851687688999999885188999997348876476488875000201
Q ss_pred ECCCC---CCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 31665---5676799999888567188037899899998889851224
Q gi|254780349|r 326 VDLRS---KRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLG 370 (433)
Q Consensus 326 vdl~~---~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlG 370 (433)
|++.. ..-|-.-.++..++-+++| +||+- --.+.=+||-
T Consensus 360 l~~~~~~~ikdD~dFc~kL~~EESv~~----LPG~~--f~~pnw~Rit 401 (424)
T TIGR01265 360 LELELLEEIKDDVDFCEKLVKEESVIC----LPGSA--FGLPNWVRIT 401 (424)
T ss_pred CCHHHCCCCCCCHHHHHHHHHHCCCEE----CCCEE--ECCCCCEEEE
T ss_conf 016534464641899999987376335----46002--5599847998
No 249
>KOG1383 consensus
Probab=98.67 E-value=5.2e-06 Score=62.38 Aligned_cols=269 Identities=14% Similarity=0.153 Sum_probs=165.5
Q ss_pred HHHHHHHHHHHHHHCCCCCEE-CCCHHH-HHH----HHHHHHHHHC-CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999999999999871886301-000016-799----9999998315-487488123344841114766543333322013
Q gi|254780349|r 78 DDIENIAIERAKKLFNVNFVN-VQSHSG-SQM----NQGVFLALMH-PGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIP 150 (433)
Q Consensus 78 d~iE~la~~~a~~lF~a~~an-vqp~SG-~~A----n~av~~ALl~-pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~ 150 (433)
.++|.-|+.-.+.||++.-.. -+-.+| |-+ +..-.--..+ .|=+.=.+...+-.|-.--+....-+..++.+
T Consensus 119 ~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~i~~p~iv~~~~v~~a~eK~a~yf~v~l~~V- 197 (491)
T KOG1383 119 RKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREV- 197 (491)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEE-
T ss_conf 8999999999999846996456755446516888898999999974059887100215889999999876679999765-
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC--CCCCHHHHHHHHHH-CCCEEEECCCCHHHHHHH-HCCCC-CCC
Q ss_conf 66583235659899999998604667897055243--53637999988641-797899186201244320-00123-220
Q gi|254780349|r 151 YNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS--RVWDWERFRSIADS-IGAYLMADISHISGLVVG-GQHPS-PVP 225 (433)
Q Consensus 151 y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~--~~~d~~~l~eIa~~-~ga~l~~D~aH~~GLIa~-g~~~~-Pl~ 225 (433)
++|+.++.+|..++.+.+.+. ..+++.-.-.+| -.-|++++.++.-+ ++.-+.+|++ .-|+|+- +.++- |++
T Consensus 198 -~~~~~~~~~D~~k~~~~i~eN-ti~lV~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~-~GgFi~p~~~~~~~~fd 274 (491)
T KOG1383 198 -PLDEGDYRVDPGKVVRMIDEN-TIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDAC-LGGFINPAGYLNEEEFD 274 (491)
T ss_pred -ECCCCCEEECHHHHHHHHCCC-EEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEECCC-CCCCCCCCCCCCCCCCC
T ss_conf -036322576299999875346-379999758887673015999999999872775042016-76621013245754566
Q ss_pred C----CCEEEECCCCCCCCCCC-EEEEECCCCHH-----HHCC--HHH--CHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
Q ss_conf 0----23567404565225674-48983362056-----5016--646--543223445566689999999973564899
Q gi|254780349|r 226 H----CHIVTTTTHKSLRGPRG-GLIMTNHADLA-----KKIN--SAI--FPGLQGGPFMHSIAAKAVAFGEALSSEFRD 291 (433)
Q Consensus 226 ~----ADvvt~sTHKtl~GPrg-GiI~~~~~e~~-----~~i~--~av--fPg~qg~~~~~~iaa~aval~Ea~~~~f~~ 291 (433)
. ---++.++||-=.-|.| +.+++++.++- -.+| -++ .|++-|+---+.||+-=.+|.-.-.+.|++
T Consensus 275 Fr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~l~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~ 354 (491)
T KOG1383 275 FRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRE 354 (491)
T ss_pred CCCCCEEEEEECCCEEEEECCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 68888114872353000130785799985666665438984254676556752125785128999999999861788999
Q ss_pred HHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCC
Q ss_conf 9999998889999998616-8523345888981263166556767999998885671880378
Q gi|254780349|r 292 YAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNS 353 (433)
Q Consensus 292 Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~ 353 (433)
-++++++|++.|.+.+.+- ||++++. .+.-.++.+ ++.++-.+.++.|.+-|-++|-=.
T Consensus 355 ~~~~ive~~~~l~egie~i~~i~i~gk-p~vs~~~~~--s~~~~i~elsd~l~~~GW~lnalq 414 (491)
T KOG1383 355 NTQNIVETARKLREGIENIKGIKIVGK-PLVSFILFG--SNDVNIFELSDLLRKKGWILNALQ 414 (491)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEECCC-CCEEEEECC--CCCCCCEEHHHHHHHCCCCCCCCC
T ss_conf 999999999999986543556133278-737999716--876531114578986386766567
No 250
>PRK08466 consensus
Probab=98.67 E-value=2.9e-05 Score=57.20 Aligned_cols=288 Identities=13% Similarity=0.140 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHCC--CCCEECCCHHHHHHHHHHHHHH------H-CCCCEEEECCCCCCCCCCCCCCCCCCCC-----CC
Q ss_conf 9999999998718--8630100001679999999983------1-5487488123344841114766543333-----32
Q gi|254780349|r 81 ENIAIERAKKLFN--VNFVNVQSHSGSQMNQGVFLAL------M-HPGDSFMGLSLDSGGHLTHGSSVNMSGK-----WF 146 (433)
Q Consensus 81 E~la~~~a~~lF~--a~~anvqp~SG~~An~av~~AL------l-~pGD~Il~~~l~~GGHlshg~~~~~~g~-----~~ 146 (433)
.+||.+++ +++. .+.+ .-.-||+-||.+++..- . +...+|+++.-..=|.. .| ..++++. .|
T Consensus 92 ~~lae~L~-~~~p~~l~~v-~f~~sGseA~E~AiKlAr~y~~~~g~~k~~iis~~~~yHG~T-~g-a~s~~~~~~~~~~~ 167 (430)
T PRK08466 92 IKLSERLC-ELTPRGLNKC-FYADNGSSAIEVALKMSFHYHKNKGKKKSLFLSLSNSYHGET-LG-ALSVGDVALYKDTY 167 (430)
T ss_pred HHHHHHHH-HHCCCCCCEE-EEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC-HH-HHCCCCCCCCCCCC
T ss_conf 99999999-8578877879-983771999999999999997522689758999647526885-21-10257840024677
Q ss_pred -------CCCCCCCCCCCCCCCHHHHHHHHHHHCCC--EEEEEC----CC---CCCCCCHHHHHHHHHHCCCEEEECCCC
Q ss_conf -------20136658323565989999999860466--789705----52---435363799998864179789918620
Q gi|254780349|r 147 -------KAIPYNVRKEDGLLDMHEIESLAIEYNPK--LIIVGG----TA---YSRVWDWERFRSIADSIGAYLMADISH 210 (433)
Q Consensus 147 -------~~~~y~~d~~~~~ID~d~~~~~a~~~kPk--lIi~G~----S~---y~~~~d~~~l~eIa~~~ga~l~~D~aH 210 (433)
...+++.+.....-+.+.+++++++...+ -||+.. +. .+-+-=++++|++|++.|++|++|.=.
T Consensus 168 ~p~~~~~~~~p~p~~~~~~~~~~~~l~~~l~~~~~~iAAvI~EPiiqg~gg~~~~~~~yl~~lr~lc~~~gillI~DEV~ 247 (430)
T PRK08466 168 KPLLLECLQTPVPKDDEAYQEALEALKRILEKHAEEICAFILEPLVQCAGNMHMYSAEYLKEAIKLCHKYNIHIIFDEIA 247 (430)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEE
T ss_conf 88776861158999716678889999999985899777999978766779976898899999999985359668873101
Q ss_pred HHHH-HHHHCCCC-CCCC-CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCC-----HHHC--HHHHHHHHHHHHHHH
Q ss_conf 1244-32000123-2200-23567404565225---674489833620565016-----6465--432234455666899
Q gi|254780349|r 211 ISGL-VVGGQHPS-PVPH-CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKIN-----SAIF--PGLQGGPFMHSIAAK 277 (433)
Q Consensus 211 ~~GL-Ia~g~~~~-Pl~~-ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~-----~avf--Pg~qg~~~~~~iaa~ 277 (433)
+ |+ =.|..|.. -+.- .|+||.+ |.|.| |-|+++.. + ++.+.+. ...| -++.+|.-+..-||+
T Consensus 248 t-GfGRtG~~fa~~~~gv~PDiv~~g--K~l~gG~~Pisav~~~-~-ei~~~~~~~~~~~~~~~h~~T~~Gnpla~aaal 322 (430)
T PRK08466 248 V-GFGRTGTMFALEQCGISPDFLCLS--KGITGGYLPLSVVLTS-D-EIYNAFYAPYEENKAFLHSHSYTGNALACAAAN 322 (430)
T ss_pred C-CCCCCCCCHHHHHCCCCCCEEEEC--CCCCCCCCCEEEEEEC-H-HHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHH
T ss_conf 1-787667620554169999889868--4101788774999985-8-999875056555666012657888979999999
Q ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCEEE-ECCCCCCCC---HHHHHHHHHHCCEEEECC
Q ss_conf 999999735648999999998889999998616-852334588898126-316655676---799999888567188037
Q gi|254780349|r 278 AVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHLML-VDLRSKRMT---GKRAESILGRVSITCNKN 352 (433)
Q Consensus 278 aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~vl-vdl~~~~~~---G~~a~~~Le~~gI~~Nkn 352 (433)
| .+.+ ++.+ .+.+++-+..+.|.+.|.+. .++++..-.-.-+++ +++.+.... +....+.+-+.|+++..
T Consensus 323 a-~L~~-l~~~--~l~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~iel~~~~~~~~~~~~i~~~~l~~Gll~~~- 397 (430)
T PRK08466 323 A-TLDI-FEDE--NVIEKNQILSEFIQKELSRLEKLDFVGNLRQCGMVFAFELLGTDTKERVGLFVFQKALKKGLLLRP- 397 (430)
T ss_pred H-HHHH-HHHC--CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEC-
T ss_conf 9-9999-9968--888999999999999999862499757884125389999845885037999999999978938911-
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 89989999888985122466673079998999999999999960
Q gi|254780349|r 353 SIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 353 ~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
. .+.||+..| ++ +.++|++++.+.+.++|+
T Consensus 398 ---~-------g~~l~~~Pp-L~---it~eeid~~~~~l~~al~ 427 (430)
T PRK08466 398 ---L-------GNTIYFMPP-YI---ITKEEIKKVIEVLEEIIK 427 (430)
T ss_pred ---C-------CCEEEEECC-CC---CCHHHHHHHHHHHHHHHH
T ss_conf ---4-------999999798-58---899999999999999999
No 251
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=98.64 E-value=8.3e-05 Score=54.01 Aligned_cols=272 Identities=15% Similarity=0.171 Sum_probs=134.4
Q ss_pred HHHHHHHHHHHHHH--HCCCCEEEECCCCCCCCCCCCCCCCCCC------CC-------CCCCCCCC--------CCCCC
Q ss_conf 01679999999983--1548748812334484111476654333------33-------22013665--------83235
Q gi|254780349|r 102 HSGSQMNQGVFLAL--MHPGDSFMGLSLDSGGHLTHGSSVNMSG------KW-------FKAIPYNV--------RKEDG 158 (433)
Q Consensus 102 ~SG~~An~av~~AL--l~pGD~Il~~~l~~GGHlshg~~~~~~g------~~-------~~~~~y~~--------d~~~~ 158 (433)
-||+-|+.+++..- ..-..+|+++.-..=|+.. ...++++ .. ...++|+. +++..
T Consensus 108 ~sGsEAve~AiklAr~~tgr~~ii~~~~~yHG~t~--~a~s~t~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~ 185 (429)
T PRK08117 108 NSGAEAIEGALKLAKHVTKRQGIISFTGAFHGRTL--GALSVTTSSSKYRKRYQPLLPSVYHAPYPYCFRCPIGRDPESC 185 (429)
T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC--CEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHH
T ss_conf 87468999999999986389859998457788866--0455316753234577899998366378863256567880566
Q ss_pred C-CCHHHHHHHHHHH-CC---CEEEE----ECC--CCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCCC-CC
Q ss_conf 6-5989999999860-46---67897----055--24353637999988641797899186201244-320001232-20
Q gi|254780349|r 159 L-LDMHEIESLAIEY-NP---KLIIV----GGT--AYSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPSP-VP 225 (433)
Q Consensus 159 ~-ID~d~~~~~a~~~-kP---klIi~----G~S--~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~P-l~ 225 (433)
. -+++.+++++++. .| .-||+ |.. ..|-+-=+++++++|++.|++|++|.-++ |+ =.|..|-.. +.
T Consensus 186 ~~~~~~~l~~~~~~~~~~~~iAAviiEPi~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-GfGRtG~~fa~~~~g 264 (429)
T PRK08117 186 SLECLRDLESLFKRQIAPEEVAAIIIEPVLGEGGYIVPPKEFLQKVREICDEHGILLIFDEVQS-GFGRTGKWFAAETFG 264 (429)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEECCHHHHHHHHHHHHHCCCEEECCCCCC-CCCCCCCCCHHHCCC
T ss_conf 8999999999998624888789999964667889373888999999999876391797343110-777667732654049
Q ss_pred -CCCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q ss_conf -023567404565225--67448983362056501664654322344556668999999997356489999999988899
Q gi|254780349|r 226 -HCHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQA 302 (433)
Q Consensus 226 -~ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~ 302 (433)
..|+||.+ |.|.| |=++++.+ + ++.+.+.....=.+.+|.-...-||++ .+.+ ++. ..+.++|-+..+.
T Consensus 265 v~PDiv~~g--K~lggG~Plsav~~~-~-~i~~~~~~~~~~~T~~gnp~~~aaa~a-~L~~-~~~--~~l~~~v~~~g~~ 336 (429)
T PRK08117 265 VVPDIMTVA--KGIASGFPLSAVVAS-K-ELMDQWPLGAHGTTFGGNPVACAAALA-TLEV-IKE--EKLLENANNMGAY 336 (429)
T ss_pred CCCCEEEEE--ECCCCCCCCCCCCCC-H-HHHHCCCCCCCCCCCCCCHHHHHHHHH-HHHH-HHH--CCHHHHHHHHHHH
T ss_conf 899878871--014478986422147-9-997066888868589989899999999-9999-975--5699999999999
Q ss_pred HHHHHHHC--CCCCCCCCCCCCEEE-ECCCC-CC-CCH---HHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 99998616--852334588898126-31665-56-767---999998885671880378998999988898512246667
Q gi|254780349|r 303 LAKKLQFL--GFDIVSGGTDNHLML-VDLRS-KR-MTG---KRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSG 374 (433)
Q Consensus 303 La~~L~~~--G~~vv~ggTd~H~vl-vdl~~-~~-~~G---~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~ai 374 (433)
|.+.|.+. .+++++.-.---+++ +++.. .+ -++ .++.+.+-+.|+++.... .....||+.-| +
T Consensus 337 l~~~L~~l~~~~p~v~~VRG~Gl~~giel~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g--------~~~n~i~~~PP-L 407 (429)
T PRK08117 337 ALERLEKLKEKYPVIGDVRGIGLMIGIEFVDETGEPDGDAVEKILDKCLENGLLLYGCG--------NDGNVLRFIPP-L 407 (429)
T ss_pred HHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECC--------CCCCEEEEECC-C
T ss_conf 99999999971998788522667999999648889469999999999996995898447--------99998999799-7
Q ss_pred HHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 3079998999999999999960
Q gi|254780349|r 375 TTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 375 TtrG~~e~em~~iA~li~~~L~ 396 (433)
+ +.++|++++.+.+.++|.
T Consensus 408 ~---is~~eid~~~~~l~~al~ 426 (429)
T PRK08117 408 T---VTKEEIDQGLSILDKGLG 426 (429)
T ss_pred C---CCHHHHHHHHHHHHHHHH
T ss_conf 7---999999999999999999
No 252
>PRK09044 consensus
Probab=98.64 E-value=8.7e-05 Score=53.85 Aligned_cols=283 Identities=16% Similarity=0.115 Sum_probs=145.2
Q ss_pred HHHHHHHHHHHCC--CCCEECCCHHHHHHHHHHHHHHH-------CC-CCEEEECCCCCCCCCCCCCCCCCCC--CCCC-
Q ss_conf 9999999998718--86301000016799999999831-------54-8748812334484111476654333--3322-
Q gi|254780349|r 81 ENIAIERAKKLFN--VNFVNVQSHSGSQMNQGVFLALM-------HP-GDSFMGLSLDSGGHLTHGSSVNMSG--KWFK- 147 (433)
Q Consensus 81 E~la~~~a~~lF~--a~~anvqp~SG~~An~av~~ALl-------~p-GD~Il~~~l~~GGHlshg~~~~~~g--~~~~- 147 (433)
++||.+++ +++. .+.+-. .-||+-||.+++..-. .+ ..+|+++.-..=|. |.| ..++++ .++.
T Consensus 88 ~~la~~L~-~~~p~~l~~v~f-~~SGsEAvE~AiKlA~~y~~~r~~tgr~~ii~~~~~yHG~-T~g-a~s~~~~~~~~~~ 163 (418)
T PRK09044 88 YRLASRLA-AILPGDLERVFF-SDSGSVAVEVAMKMAVQYWLNRGERGRTKFLAFRGGYHGD-TLA-TMAVCDPEEGMHS 163 (418)
T ss_pred HHHHHHHH-HHCCCCCCEEEE-ECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC-CHH-HHCCCCCCCCCCC
T ss_conf 99999999-857887586986-2867899999999999999862456776289961877786-666-6211577557667
Q ss_pred ----------CCCCCCCCCCCCCCHHHHHHHHHHHCCC--EEEEEC----C--CCC-CCCCHHHHHHHHHHCCCEEEECC
Q ss_conf ----------0136658323565989999999860466--789705----5--243-53637999988641797899186
Q gi|254780349|r 148 ----------AIPYNVRKEDGLLDMHEIESLAIEYNPK--LIIVGG----T--AYS-RVWDWERFRSIADSIGAYLMADI 208 (433)
Q Consensus 148 ----------~~~y~~d~~~~~ID~d~~~~~a~~~kPk--lIi~G~----S--~y~-~~~d~~~l~eIa~~~ga~l~~D~ 208 (433)
..+++.+. -+.+.++.+..+...+ -||+.. + ..+ -+-=++++|++|+++|++|++|.
T Consensus 164 ~~~~~~p~~~~~~~p~~~----~~~~~l~~~~~~~~~~iAavi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~gillI~DE 239 (418)
T PRK09044 164 LFAGVLPEQVIADLPRDA----ASEAALDALLERHGGEIAAILVEPLVQGAGGMLFHDPEVLRRLRRLADRHGLLLIFDE 239 (418)
T ss_pred CCCCCCCCCEEECCCCCH----HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCC
T ss_conf 778989976145799986----7899999999757997789999466357898748988999999999987498677212
Q ss_pred CCHHHH-HHHHCCC-CCCCC-CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCC-----HHHCH-HHHHHHHHHHHHH
Q ss_conf 201244-3200012-32200-23567404565225---674489833620565016-----64654-3223445566689
Q gi|254780349|r 209 SHISGL-VVGGQHP-SPVPH-CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKIN-----SAIFP-GLQGGPFMHSIAA 276 (433)
Q Consensus 209 aH~~GL-Ia~g~~~-~Pl~~-ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~-----~avfP-g~qg~~~~~~iaa 276 (433)
-++ |+ =.|..|- .-+.- .|+||. -|.|.| |=++++..+ ++.+.+. .+.+- ++.+|.-+...||
T Consensus 240 V~t-G~GRtG~~fa~~~~gv~PDivt~--gKgl~gG~~Plsav~~~~--~i~~~~~~~~~~~~~~hg~T~~gnpl~cAaa 314 (418)
T PRK09044 240 IFT-GFGRTGTMFAFEQAGVVPDIVTL--SKALTGGTLPLAATVASR--RVFEAFWSDDPGHALMHGPTYMGNPLACAAA 314 (418)
T ss_pred CCC-CCCCCCCCCHHHHCCCCCCEEEE--CHHCCCCCCCCEEEEECH--HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 203-68766785323325958872430--200148877610235539--9999750379875502178888998999999
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCEEE-ECCCCCCCCHHHHHHHHHHCCEEEECCCC
Q ss_conf 9999999735648999999998889999998616-852334588898126-31665567679999988856718803789
Q gi|254780349|r 277 KAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHLML-VDLRSKRMTGKRAESILGRVSITCNKNSI 354 (433)
Q Consensus 277 ~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~vl-vdl~~~~~~G~~a~~~Le~~gI~~Nkn~i 354 (433)
+|+ |.. ++. ..+.+++.+..+.|.+.|... .++.|..-.---+++ +++.+. .....+.+.|.+.|+.+..
T Consensus 315 la~-L~~-i~~--~~l~~~~~~~g~~l~~~L~~~~~~~~v~~VRG~Glm~~iel~~~-~~~~~~~~~~~~~Gv~v~~--- 386 (418)
T PRK09044 315 NAS-LDL-FED--EPRLEQVAAIEAQLRAGLEPCRDLPGVVDVRVLGAIGVVELERI-PPLDDLRARFVDRGVWIRP--- 386 (418)
T ss_pred HHH-HHH-HHH--CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCC-CCHHHHHHHHHHCCCEEEE---
T ss_conf 999-999-973--47999999999999999997536997798800557999993685-7699999999978977974---
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 989999888985122466673079998999999999999960
Q gi|254780349|r 355 PFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 355 P~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
+ .+.|||.-|-. +.++|++++.+.+.++|.
T Consensus 387 -~-------gn~irl~PpL~----it~~eid~~~~~l~~~l~ 416 (418)
T PRK09044 387 -F-------RNIVYLTPAFT----IAEDDLARLTAAIRQVVA 416 (418)
T ss_pred -C-------CCEEEEECCCC----CCHHHHHHHHHHHHHHHH
T ss_conf -5-------99999979957----899999999999999985
No 253
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=98.63 E-value=2.3e-05 Score=57.86 Aligned_cols=265 Identities=15% Similarity=0.155 Sum_probs=130.7
Q ss_pred CHHHHHHHHHHHHHH--HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CC---CCCCCHHHHHHHHHHHCC
Q ss_conf 001679999999983--154874881233448411147665433333220136658-32---356598999999986046
Q gi|254780349|r 101 SHSGSQMNQGVFLAL--MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVR-KE---DGLLDMHEIESLAIEYNP 174 (433)
Q Consensus 101 p~SG~~An~av~~AL--l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d-~~---~~~ID~d~~~~~a~~~kP 174 (433)
..|||-||.+++..- ....++|+++.-..=|+. . ...+.++.......|+.. +. ...=|++.++++..+ +.
T Consensus 90 ~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t-~-ga~s~tg~~~~~~~~~~~~p~~~~~~~~d~~~~~~~~~~-~i 166 (375)
T PRK04260 90 CNSGAEANEAAIKLARKATGKQEIITFQNSFHGRT-F-GAMSATGQDKIKQGFGDGVPHFSYAIFNDLNSVKALVNK-NT 166 (375)
T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC-C-HHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCC-CC
T ss_conf 08678999999998765479986999778899674-4-012204874334577889987345210458899986377-83
Q ss_pred CEEEE----ECC-CCCC-CCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCC-CCCC-CCEEEECCCCCCCC--CCC
Q ss_conf 67897----055-2435-3637999988641797899186201244-32000123-2200-23567404565225--674
Q gi|254780349|r 175 KLIIV----GGT-AYSR-VWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPS-PVPH-CHIVTTTTHKSLRG--PRG 243 (433)
Q Consensus 175 klIi~----G~S-~y~~-~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~-Pl~~-ADvvt~sTHKtl~G--Prg 243 (433)
.-||+ |.+ ..+- +-=++++|++|+++|.+|++|.-++ |+ =.|..|.. -+.- .|+||.+ |.|.| |-|
T Consensus 167 AAiiiEpiqg~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~fa~e~~gv~PDiv~~g--Kglg~G~P~s 243 (375)
T PRK04260 167 AAVMLELVQGESGVLPADKAFVKALADYCQETGILLIVDEVQT-GIGRTGKLYAFEHYGIEPDIFTLA--KGLANGLPVG 243 (375)
T ss_pred EEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCC-CCCCCCCCCHHHCCCCCCCEEEEC--HHCCCCCCEE
T ss_conf 5999981058898757898999999999998476257301211-787656865543169888789871--0104886439
Q ss_pred EEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCCCCC
Q ss_conf 489833620565016646543223445566689999999973564899999999888999999861--685233458889
Q gi|254780349|r 244 GLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQF--LGFDIVSGGTDN 321 (433)
Q Consensus 244 GiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~--~G~~vv~ggTd~ 321 (433)
+++.. + ++.+.++....-.+.++.-+..-||+++ .+.++. ..+.+++.+..+.|.+.|.+ ..++.+..---.
T Consensus 244 av~~~-~-~i~~~~~~~~h~~T~~gnpla~aaa~a~--L~~i~~--~~l~~~~~~~g~~l~~~L~~~~~~~~~i~~vRG~ 317 (375)
T PRK04260 244 AMLGK-S-SLGGAFGYGSHGSTFGGNKLSMAAAKAT--LEIMLT--AGFLETVLSKGNKLQEQLQEALQDKETVTTVRGL 317 (375)
T ss_pred EEEEC-H-HHHCCCCCCCCCCCCCCCHHHHHHHHHH--HHHHHH--CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 99986-7-8744667878577799898999999999--999986--4699999999999999999998539973763055
Q ss_pred CEEE-ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 8126-316655676799999888567188037899899998889851224666730799989999999999999
Q gi|254780349|r 322 HLML-VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQI 394 (433)
Q Consensus 322 H~vl-vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~ 394 (433)
-+++ +++.+ +-.+..+.+.+.|+++... + ++-|||.-| ++ +.++|++++-+++.++
T Consensus 318 Gl~~gie~~~---~~~~~~~~~~~~Gll~~~~---g-------~nvi~~~Pp-l~---it~~eid~~~~~l~~v 374 (375)
T PRK04260 318 GYMIGIETTA---DLSQLVQAARDKGLIILTA---G-------TNVIRLLPP-LT---ISKAEIEKGIAILSEI 374 (375)
T ss_pred EEEEEEEECC---CHHHHHHHHHHCCCEEEEC---C-------CCEEEEECC-CC---CCHHHHHHHHHHHHHH
T ss_conf 7999999578---9999999999689699407---9-------998999899-34---8899999999999986
No 254
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.62 E-value=4.9e-05 Score=55.60 Aligned_cols=267 Identities=16% Similarity=0.141 Sum_probs=137.9
Q ss_pred CHHHHHHHHHHHHHHH--------CCCCEEEECCCCCCCCCCCCCCC---CC----CC---CC------CCCCCCCC---
Q ss_conf 0016799999999831--------54874881233448411147665---43----33---33------22013665---
Q gi|254780349|r 101 SHSGSQMNQGVFLALM--------HPGDSFMGLSLDSGGHLTHGSSV---NM----SG---KW------FKAIPYNV--- 153 (433)
Q Consensus 101 p~SG~~An~av~~ALl--------~pGD~Il~~~l~~GGHlshg~~~---~~----~g---~~------~~~~~y~~--- 153 (433)
.-||+-||.+++.-.. ....+|+++.-.. ||... ++ ++ .+ ..+.+++.
T Consensus 110 ~~SGsEAvE~AiKlA~~y~~~~g~~~r~~ii~~~~~y-----HG~T~~a~s~~~~~~~~~~~~~~~~p~~~~~p~~~~~~ 184 (429)
T PRK06173 110 ADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGY-----HGDTWHAMSVCDPVTGMHGLFNSSLPVQYFLPQPSVKF 184 (429)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC-----CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 1865999999999999999972898765267505885-----88757677605764466666678898653468998765
Q ss_pred CCCCCCCCHHHHHHHHHHHCCC--EEEEE-----CC-CC-CCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCC-
Q ss_conf 8323565989999999860466--78970-----55-24-353637999988641797899186201244-32000123-
Q gi|254780349|r 154 RKEDGLLDMHEIESLAIEYNPK--LIIVG-----GT-AY-SRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPS- 222 (433)
Q Consensus 154 d~~~~~ID~d~~~~~a~~~kPk--lIi~G-----~S-~y-~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~- 222 (433)
.......+.+.++++++++.++ -||+. .. .+ +-+-=++++|++|++.|++|++|.-.+ |+ =.|..|-.
T Consensus 185 ~~~~~~~~~~~l~~~~~~~~~~iAavi~EPi~qg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~fa~e 263 (429)
T PRK06173 185 GEAWRDEAIEPLQDLLEQHGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIAT-GFGRTGKLFALE 263 (429)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCC-CCCCCCCCCHHH
T ss_conf 6542277999999999855886369999864467898667899999999987512485577301320-687366844532
Q ss_pred CCCC-CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCCHH---HC-H-HHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf 2200-23567404565225---67448983362056501664---65-4-322344556668999999997356489999
Q gi|254780349|r 223 PVPH-CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKINSA---IF-P-GLQGGPFMHSIAAKAVAFGEALSSEFRDYA 293 (433)
Q Consensus 223 Pl~~-ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~a---vf-P-g~qg~~~~~~iaa~aval~Ea~~~~f~~Ya 293 (433)
=+.- .|+||.. |.|.| |=+++|.. + ++.+.+.+. .| . .+.+|..+..-||+|+ +....++. ..
T Consensus 264 ~~gv~PDivt~g--KglggG~~P~~avi~~-~-~i~~~~~~g~~~~f~hg~T~~Gnpla~Aaa~a~-L~~i~~~~---l~ 335 (429)
T PRK06173 264 HAGVVPDIMCIG--KALTGGYLTLSATITT-E-EIAQTICSGEAKCFMHGPTFMANPLACAIAAES-IRLLLESP---WQ 335 (429)
T ss_pred CCCCCCCEEEEC--CCCCCCCCCEEEEEEC-H-HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHHHHHCC---HH
T ss_conf 368999789855--4456887761789876-8-999642468766635278998689999999999-99998646---99
Q ss_pred HHHHHHHHHHHHHHHHC-CCCCCCCCCCCC-EEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99998889999998616-852334588898-1263166556767999998885671880378998999988898512246
Q gi|254780349|r 294 KQIVLNSQALAKKLQFL-GFDIVSGGTDNH-LMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGT 371 (433)
Q Consensus 294 ~qvv~NA~~La~~L~~~-G~~vv~ggTd~H-~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT 371 (433)
.++-+..+.|.+.|.+. .++.|..=---- +..++++. ..+.....++|-+.|+++... ...||+-
T Consensus 336 ~~~~~~g~~l~~~L~~~~~~~~v~dVRG~Gl~~~iel~~-~~~~~~l~~~~~~~Gll~~~~-----------g~~l~l~- 402 (429)
T PRK06173 336 QNIQRIERQLRQELSPAAEFDYVAEVRVLGAIGVVEMKS-PVDMATLQPRFVEHGIWVRPF-----------GKLVYLM- 402 (429)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECC-CCCHHHHHHHHHHCCCEEEEC-----------CCEEEEE-
T ss_conf 999999999999999631699668742357299999468-456999999999699589834-----------9989995-
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 66730799989999999999999602
Q gi|254780349|r 372 PSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 372 ~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
|++| +.++|+.++.+.+.++|+.
T Consensus 403 PPL~---it~~ei~~~~~~l~~aL~e 425 (429)
T PRK06173 403 PPFI---ISQDELTQLTSGLLRVLTQ 425 (429)
T ss_pred CCCC---CCHHHHHHHHHHHHHHHHH
T ss_conf 8936---8999999999999999999
No 255
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.61 E-value=0.0001 Score=53.30 Aligned_cols=270 Identities=17% Similarity=0.183 Sum_probs=138.9
Q ss_pred CHHHHHHHHHHHHHH-------HCCCCEEEECCCCCCCCCCCCCCCCCC-----------CCCCC--CCCCC---CCCCC
Q ss_conf 001679999999983-------154874881233448411147665433-----------33322--01366---58323
Q gi|254780349|r 101 SHSGSQMNQGVFLAL-------MHPGDSFMGLSLDSGGHLTHGSSVNMS-----------GKWFK--AIPYN---VRKED 157 (433)
Q Consensus 101 p~SG~~An~av~~AL-------l~pGD~Il~~~l~~GGHlshg~~~~~~-----------g~~~~--~~~y~---~d~~~ 157 (433)
.-||+-||.+++..- -++..+|+++.-..=|. |.| ..+++ +..-. ..+++ ++.+.
T Consensus 109 ~~sGSEAvE~AlKlAr~y~~~~g~~r~~ii~~~~syHG~-T~g-als~t~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 186 (428)
T PRK07986 109 ADSGSVAVEVAMKMALQYWQAKGEPRQRFLTFRHGYHGD-TFG-AMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEW 186 (428)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC-CHH-HEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 486289999999999999997099864499983873899-712-257316864443455777998501378876656555
Q ss_pred CCCCHHHHHHHHHHHCCC--EEEEE----CC-C--CCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCCC-CCC
Q ss_conf 565989999999860466--78970----55-2--4353637999988641797899186201244-320001232-200
Q gi|254780349|r 158 GLLDMHEIESLAIEYNPK--LIIVG----GT-A--YSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPSP-VPH 226 (433)
Q Consensus 158 ~~ID~d~~~~~a~~~kPk--lIi~G----~S-~--y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~P-l~~ 226 (433)
..-|.+.++++..+.+.+ -||+. .+ - .+-+-=++++|+|||++|++|++|.-.+ |+ -.|..|-.- +.-
T Consensus 187 ~~~~~~~~~~~~~~~~~~iAAviiEPi~qg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~fa~e~~gv 265 (428)
T PRK07986 187 DERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRIRKLCDREGILLIADEIAT-GFGRTGKLFACEHAGI 265 (428)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHCCCEEEECCCCC-CCCCCCCCCCCCCCCC
T ss_conf 712399999999747887018998324467698353899999999999986396366110002-7886678650000478
Q ss_pred -CCEEEECCCCCCC-C--CCCEEEEECCCCHHHHCCH---HHCH--HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
Q ss_conf -2356740456522-5--6744898336205650166---4654--3223445566689999999973564899999999
Q gi|254780349|r 227 -CHIVTTTTHKSLR-G--PRGGLIMTNHADLAKKINS---AIFP--GLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIV 297 (433)
Q Consensus 227 -ADvvt~sTHKtl~-G--PrgGiI~~~~~e~~~~i~~---avfP--g~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv 297 (433)
.|++|. -|.|. | |-|+++.. + ++.+.+.. .+|. .+.+|.-+...||+|+- .+..++.+ ..++-
T Consensus 266 ~PDiit~--gKgl~gG~~Pl~av~~~-~-~i~~~~~~~~~~~f~hg~Tf~Gnpla~Aaa~a~L-~~i~~~~l---~~~~~ 337 (428)
T PRK07986 266 APDILCL--GKALTGGTMTLSATLTT-R-EVAETISNGEAGCFMHGPTFMGNPLACAVANASL-SLLESGDW---QQQVA 337 (428)
T ss_pred CCCEEEE--CCCCCCCCCCEEEEEEC-H-HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHHHHCCH---HHHHH
T ss_conf 9988997--52013887753899986-9-9996305687654101778999989999999999-99986569---99999
Q ss_pred HHHHHHHHHHHHC-CCCCCCCCCCCCEE-EECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 8889999998616-85233458889812-631665567679999988856718803789989999888985122466673
Q gi|254780349|r 298 LNSQALAKKLQFL-GFDIVSGGTDNHLM-LVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGT 375 (433)
Q Consensus 298 ~NA~~La~~L~~~-G~~vv~ggTd~H~v-lvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiT 375 (433)
+....|.+.|.+. ..++|+.---.-++ .++++. ..+.....+.+-+.|+++- |+. +-|||--|-+
T Consensus 338 ~~g~~l~~~L~~L~~~~~V~dVRg~Gl~~~ve~~~-p~~~~~~~~~~~~~Gll~~----~~g-------~~i~l~PPLi- 404 (428)
T PRK07986 338 AIESQLREELAPLRDAEMVADVRVLGAIGVVETTR-PVNMAALQRFFVEQGVWIR----PFG-------KLIYLMPPYI- 404 (428)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECC-CCCHHHHHHHHHHCCCEEE----ECC-------CEEEEECCCC-
T ss_conf 99999999999875599578774267289998079-4539999999997994897----459-------9999989914-
Q ss_pred HCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 0799989999999999999602
Q gi|254780349|r 376 TRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 376 trG~~e~em~~iA~li~~~L~~ 397 (433)
+.++|+.++.+.|.++|+.
T Consensus 405 ---it~~ei~~~~~~l~~al~e 423 (428)
T PRK07986 405 ---ILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred ---CCHHHHHHHHHHHHHHHHH
T ss_conf ---9999999999999999975
No 256
>PRK06062 hypothetical protein; Provisional
Probab=98.61 E-value=1.4e-05 Score=59.41 Aligned_cols=212 Identities=19% Similarity=0.193 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHCCC---EEEE----E--CCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCC-CCCC-CCE
Q ss_conf 89999999860466---7897----0--5524353637999988641797899186201244-32000123-2200-235
Q gi|254780349|r 162 MHEIESLAIEYNPK---LIIV----G--GTAYSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPS-PVPH-CHI 229 (433)
Q Consensus 162 ~d~~~~~a~~~kPk---lIi~----G--~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~-Pl~~-ADv 229 (433)
.+.+++++....|. -||+ | +...+-+-=++++|++|++.|++|++|.-++ |+ -.|..|-. -+.- .|+
T Consensus 183 l~~l~~~i~~~~~~~iAAvivEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~T-G~GRtG~~fa~e~~gv~PDi 261 (434)
T PRK06062 183 LAHLERVIALEGPSTIAAIVLESVPGTAGIMVPPPGYLAGVRELCDRHGIVFIADEVMA-GFGRTGKWFAIEHFDVVPDL 261 (434)
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCC-CCCCCCCCCCCCCCCCCCCH
T ss_conf 99999999851999779999478678899866876787689999998595067464322-78766664210058979762
Q ss_pred EEECCCCCCCC---CCCEEEEECCCCHHHHCCHHHCHH--HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH-HHHH
Q ss_conf 67404565225---674489833620565016646543--22344556668999999997356489999999988-8999
Q gi|254780349|r 230 VTTTTHKSLRG---PRGGLIMTNHADLAKKINSAIFPG--LQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLN-SQAL 303 (433)
Q Consensus 230 vt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~avfPg--~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~N-A~~L 303 (433)
+|. -|.|.| |-++++.++ ++.+.+....|++ +.+|..+...||+++ .|.++.+ .+..++.+. ++.|
T Consensus 262 v~~--gK~l~gG~~Plsav~~~~--~i~~~~~~~~~~~g~T~~Gnpla~Aaa~a~--L~~i~~~--~l~~~~~~~G~~~l 333 (434)
T PRK06062 262 ITF--AKGVNSGYVPLGGVAISE--AIADTFADRPYPGGLTYSGHPLACAAAVAT--INAMEEE--GIVENAARIGAEVL 333 (434)
T ss_pred HEE--HHHHCCCCCCEEEEEECH--HHHHHHCCCCCCCCCCCCCCHHHHHHHHHH--HHHHHHC--CHHHHHHHHHHHHH
T ss_conf 101--033148877617887459--999874226756787888987999999999--9999735--89999999999999
Q ss_pred HHHHHHC--CCCCCCC----CCCCCEEEECCC-------CCC---CCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf 9998616--8523345----888981263166-------556---76799999888567188037899899998889851
Q gi|254780349|r 304 AKKLQFL--GFDIVSG----GTDNHLMLVDLR-------SKR---MTGKRAESILGRVSITCNKNSIPFDPESPFITSGI 367 (433)
Q Consensus 304 a~~L~~~--G~~vv~g----gTd~H~vlvdl~-------~~~---~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGi 367 (433)
.+.|.+. .++.+.. |--.-+-+++-+ ..+ .........|.+.|+++.-+ .+-|
T Consensus 334 ~~~L~~l~~~~p~v~~VRG~GL~~gielv~~~~~~~~~~~~~~~~~~~~~v~~~~~~~Gll~~~~-----------gn~i 402 (434)
T PRK06062 334 GPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLVPYGAASAAMAAVVAACKERGLLPFVN-----------GNRI 402 (434)
T ss_pred HHHHHHHHHHCCCEEEEEECCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEC-----------CCEE
T ss_conf 99999998658986888616626999982264435555544332799999999999799278335-----------9989
Q ss_pred CCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 224666730799989999999999999602
Q gi|254780349|r 368 RLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 368 RlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
|+.-| ++ +.++|+++..+.+.++|..
T Consensus 403 rl~Pp-L~---it~~eid~~l~~l~~al~~ 428 (434)
T PRK06062 403 HVVPP-CT---VTEDEVREGLAILDAALAV 428 (434)
T ss_pred EEECC-CC---CCHHHHHHHHHHHHHHHHH
T ss_conf 99789-23---8899999999999999998
No 257
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=98.59 E-value=2.4e-05 Score=57.77 Aligned_cols=189 Identities=19% Similarity=0.213 Sum_probs=99.9
Q ss_pred CHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCC-CCCCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCHHHCH
Q ss_conf 37999988641797899186201244-3200012-32200-23567404565225--67448983362056501664654
Q gi|254780349|r 189 DWERFRSIADSIGAYLMADISHISGL-VVGGQHP-SPVPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINSAIFP 263 (433)
Q Consensus 189 d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~-~Pl~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~avfP 263 (433)
=++++|++||+.|++|++|.-.+ |+ =.|..|- .-+.- .|+||.+ |.|.| |=|+++.. + ++.+.+.....-
T Consensus 226 yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~fa~e~~gv~PDiv~~g--Kgl~~G~Pisav~~~-~-ei~~~~~~~~h~ 300 (443)
T PRK08360 226 YFKKVKKILDEHGILLVVDEVQS-GLGRTGKWFAIEHFGVEPDIITLG--KPLGGGLPISATIGR-A-EIMDSLPPLSHA 300 (443)
T ss_pred HHHHHHHHHHHCCCEEEEECCCC-CCCCCCHHHHHHCCCCCCCEEEEC--CCCCCCCCCCCCCCH-H-HHHHHCCCCCCC
T ss_conf 97689887776590798511303-876544055764579698657763--444578886231114-9-898504887656
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCEEE-ECCC-CCCC------
Q ss_conf 32234455666899999999735648999999998889999998616--852334588898126-3166-5567------
Q gi|254780349|r 264 GLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL--GFDIVSGGTDNHLML-VDLR-SKRM------ 333 (433)
Q Consensus 264 g~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~--G~~vv~ggTd~H~vl-vdl~-~~~~------ 333 (433)
.+.+|.-+...||+++- +.++.+ .+.+++-+..+.|.+.|.+. .++++..-.---+++ +++. ++..
T Consensus 301 ~T~~gnpl~caaa~a~L--~~i~~~--~l~~~~~~~G~~l~~~L~~l~~~~p~i~dVRG~Gl~~gie~v~d~~~~~~~~~ 376 (443)
T PRK08360 301 FTLSGNPTASRAALAVI--EEIEEK--DLLKRAEKLGNYTKKRLEEMKEKHELIGDVRGLGLMIGVDLVKDRETKERAYE 376 (443)
T ss_pred CCCCCCHHHHHHHHHHH--HHHHHC--CHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCCCCCCCCHH
T ss_conf 68789979999999999--999863--59999999999999999998871898885203646999998127765544579
Q ss_pred CHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 6799999888567188037899899998889851224666730799989999999999999602577
Q gi|254780349|r 334 TGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDGSSS 400 (433)
Q Consensus 334 ~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~~~~ 400 (433)
...+....+-+.|+++.. ...+-||+.-|-+ ..++|++++.+.+.++|+.-..
T Consensus 377 ~~~~i~~~~~~~Glli~~----------~~~~~i~~~PPL~----it~~eid~~~~~l~~al~ev~~ 429 (443)
T PRK08360 377 ETKKVVWRAFELGLIVTF----------FQGNVLRIEPPLT----IEEEVLDEGLDILEEAIEDVEE 429 (443)
T ss_pred HHHHHHHHHHHCCCEEEE----------CCCCEEEEECCCC----CCHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999968938811----------6999899979912----8999999999999999999985
No 258
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.57 E-value=0.00011 Score=53.23 Aligned_cols=191 Identities=15% Similarity=0.145 Sum_probs=95.7
Q ss_pred CCCCCC-HHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCC-CCCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHC
Q ss_conf 435363-7999988641797899186201244-32000123-2200-23567404565225--67448983362056501
Q gi|254780349|r 184 YSRVWD-WERFRSIADSIGAYLMADISHISGL-VVGGQHPS-PVPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKI 257 (433)
Q Consensus 184 y~~~~d-~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~-Pl~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i 257 (433)
.+-|-+ ++++|++||++|.+|++|.-++ |+ -.|..|-. -+.- .|++|. -|.|.| |= +.+.+++ ++. ..
T Consensus 236 ~~~p~~yl~~lr~lc~~~gillI~DEV~t-GfGRTG~~fa~e~~gv~PDIi~~--gKglggG~P~-a~~~~~~-~~~-~~ 309 (454)
T PRK06931 236 VPAPVSWLQKIREVTQKHGILLIVDEVQA-GFARSGKMFAFEHAGIEPDIVVM--SKAVGGGLPL-AVLGIKK-EFD-AW 309 (454)
T ss_pred CCCCHHHHHHHHHHHHHCCEEEEECCCCC-CCCCCCCCCHHCCCCCCCCEEEE--HHHHCCCCCE-EEEEEHH-HHC-CC
T ss_conf 61888998899987511681899503443-77867784121025889896002--1532488854-8998755-552-46
Q ss_pred CHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCEEE-ECC---C--
Q ss_conf 66465432234455666899999999735648999999998889999998616--852334588898126-316---6--
Q gi|254780349|r 258 NSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL--GFDIVSGGTDNHLML-VDL---R-- 329 (433)
Q Consensus 258 ~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~--G~~vv~ggTd~H~vl-vdl---~-- 329 (433)
.....-++.+|..+...||+++ .+.++. .....++-+..+.|.+.|.+. .+++|..---.-+++ |++ +
T Consensus 310 ~~~~h~~T~~Gnpla~Aaala~--L~~i~~--e~l~~~~~~~G~~l~~~L~~l~~~~p~V~dVRG~GL~~giElv~~~~~ 385 (454)
T PRK06931 310 QPAGHTGTFRGNQLAMATGLAT--LKILRD--ENLAQNAQERGEWLTAALRELSKEYPCIGNVRGRGLMIGIEIVDERKP 385 (454)
T ss_pred CCCCCCCCCCCCHHHHHHHHHH--HHHHHH--CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEECCCC
T ss_conf 7888664568984788999999--999986--249999999999999999999870998886313744899998006764
Q ss_pred -----CCCCC---HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf -----55676---79999988856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 330 -----SKRMT---GKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 330 -----~~~~~---G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
.+..+ +..+.+.+-+.|++++.... .++-||+- |.++ +.++|++++.+.+.++|.
T Consensus 386 ~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g~--------~~nvlr~~-PPL~---it~~eid~~l~~l~~al~ 448 (454)
T PRK06931 386 ADATGSYPADGELAAAIQKACFNNKLLLERGGR--------NGNVVRLL-CPLN---ITQAECEEFIKRFKQAVA 448 (454)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCC--------CCCEEEEE-CCCC---CCHHHHHHHHHHHHHHHH
T ss_conf 322355666689999999999978968954689--------99989997-9901---689999999999999999
No 259
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=98.57 E-value=8.4e-05 Score=53.96 Aligned_cols=266 Identities=13% Similarity=0.156 Sum_probs=130.9
Q ss_pred CHHHHHHHHHHHHHHH-------C-CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCC---CHHHHHHH
Q ss_conf 0016799999999831-------5-487488123344841114766543333322013665832-3565---98999999
Q gi|254780349|r 101 SHSGSQMNQGVFLALM-------H-PGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKE-DGLL---DMHEIESL 168 (433)
Q Consensus 101 p~SG~~An~av~~ALl-------~-pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~-~~~I---D~d~~~~~ 168 (433)
.-||+-|+.+++..-- . ...+|+++.-..=|+.. ...++++.-.....|+..+. -..+ |.+++++.
T Consensus 103 ~~SGSEAvE~AiklAr~~~~~~~~~~r~~ii~~~~~yHG~t~--~a~s~~g~~~~~~~~~p~~~~~~~~p~~d~~~l~~~ 180 (403)
T PRK05093 103 ANSGAEANEAALKLARRYACDRHGPEKTEIIAFHNSFHGRTL--FTVSVGGQPKYSDGFGPKPADITHVPFNDLAALKAV 180 (403)
T ss_pred ECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCH--HHHHHCCCCHHCCCCCCCCCCCEECCCCCHHHHHHC
T ss_conf 386778999999999999997289987547777588688836--877625880110277899977565563368888603
Q ss_pred HHHHCCCEEEEEC------CCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCC-CCCCC-CCEEEECCCCCCC
Q ss_conf 9860466789705------524353637999988641797899186201244-3200012-32200-2356740456522
Q gi|254780349|r 169 AIEYNPKLIIVGG------TAYSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHP-SPVPH-CHIVTTTTHKSLR 239 (433)
Q Consensus 169 a~~~kPklIi~G~------S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~-~Pl~~-ADvvt~sTHKtl~ 239 (433)
.. .+..-||+.. -..+-+-=++++|++|+++|.+|++|.-++ |+ =.|..|- .-+.- .|++|.+ |.|.
T Consensus 181 ~~-~~iaAviiEPi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~t-G~GRtG~~fa~e~~gv~PDiv~~g--Kglg 256 (403)
T PRK05093 181 ID-DKTCAVVVEPIQGEGGVIPATPEFLQGLRELCDKHNALLIFDEVQT-GMGRTGDLYAYMHYGVTPDILTSA--KALG 256 (403)
T ss_pred CC-CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEE-CCCCCCCCCCCCCCCCCCCEEEEC--CCCC
T ss_conf 37-7447999957667899758999999999986301683798601342-688777752223689899889973--0015
Q ss_pred C--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH------CC
Q ss_conf 5--674489833620565016646543223445566689999999973564899999999888999999861------68
Q gi|254780349|r 240 G--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQF------LG 311 (433)
Q Consensus 240 G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~------~G 311 (433)
| |=|+++.. + ++.+.+.....-.+.+|+-+..-||+|+- +.++. .++++|++.+++.|.+ ..
T Consensus 257 gG~Plsav~~~-~-~i~~~~~~~~~g~T~~g~pla~aaala~L--~~i~~------~~l~~~a~~~G~~l~~~L~~l~~~ 326 (403)
T PRK05093 257 GGFPIGAMLTT-A-EIASHFKVGTHGSTYGGNPLACAVAEAVF--DIINT------PEVLEGVKAREQRFVDGLQKINEK 326 (403)
T ss_pred CCCCEEEEEEC-H-HHHHHCCCCCCCCCCCCCHHHHHHHHHHH--HHHHH------CCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88642799872-8-87865078772658985899999999999--99963------449999999999999999999862
Q ss_pred CCCCCCCCCCCEEE-ECCCCC-CCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf 52334588898126-316655-6767999998885671880378998999988898512246667307999899999999
Q gi|254780349|r 312 FDIVSGGTDNHLML-VDLRSK-RMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGE 389 (433)
Q Consensus 312 ~~vv~ggTd~H~vl-vdl~~~-~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~ 389 (433)
++++.+-.-..+++ +++.+. .-..++....+-+.|+++.... ++-|||.-|-+ +.++|+.++.+
T Consensus 327 ~~~i~~VRG~Glm~giel~~~~~~~a~~i~~~~~~~Gll~~~~g----------~n~irl~PPL~----it~~eid~~l~ 392 (403)
T PRK05093 327 YGVFSEIRGKGLLIGAELNEQYKGRARDFLYAAAEEGVMVLVAG----------PDVLRFAPSLV----IPDADIDEGLA 392 (403)
T ss_pred CCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCEEECCC----------CCEEEEECCCC----CCHHHHHHHHH
T ss_conf 89826665412699999658752169999999996892895279----------99799978844----89999999999
Q ss_pred HHHHHHH
Q ss_conf 9999960
Q gi|254780349|r 390 LIAQILD 396 (433)
Q Consensus 390 li~~~L~ 396 (433)
.+.++|.
T Consensus 393 ~l~~al~ 399 (403)
T PRK05093 393 RFEKAVA 399 (403)
T ss_pred HHHHHHH
T ss_conf 9999999
No 260
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=98.56 E-value=0.00011 Score=53.22 Aligned_cols=281 Identities=17% Similarity=0.167 Sum_probs=136.7
Q ss_pred HHHHHHCC---CCCEECCCHHHHHHHHHHHHHH--HCCCCEEEECCCCCCCCCCCCCCCCCCCC------CCCC------
Q ss_conf 99998718---8630100001679999999983--15487488123344841114766543333------3220------
Q gi|254780349|r 86 ERAKKLFN---VNFVNVQSHSGSQMNQGVFLAL--MHPGDSFMGLSLDSGGHLTHGSSVNMSGK------WFKA------ 148 (433)
Q Consensus 86 ~~a~~lF~---a~~anvqp~SG~~An~av~~AL--l~pGD~Il~~~l~~GGHlshg~~~~~~g~------~~~~------ 148 (433)
++..+++. ...+-. ..||+-||.+++..- ..-...|+++.-..=|+. . ...+++|. .|..
T Consensus 90 e~l~~~~p~~g~~~v~f-~~SGSEAve~AiKlAr~~tgr~~ii~~~~syHG~t-~-~a~s~tg~~~~~~~~~~p~p~~~~ 166 (421)
T PRK06777 90 ERINSLAPISGNSKTAF-FTTGAEAVENAVKIARAATGRPGVIAFSGAFHGRT-L-LTMALTGKVAPYKVGFGPFPGSIF 166 (421)
T ss_pred HHHHHHCCCCCCCEEEE-ECCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC-H-HHEECCCCCCCCCCCCCCCCCCEE
T ss_conf 99997477667644999-67827899999999998639996377578769963-4-330015887754467789998602
Q ss_pred -CCCCCCCCCCCCC----HHHHHHHHHHH-CC---CEEEE----ECCC--CCCCCCHHHHHHHHHHCCCEEEECCCCHHH
Q ss_conf -1366583235659----89999999860-46---67897----0552--435363799998864179789918620124
Q gi|254780349|r 149 -IPYNVRKEDGLLD----MHEIESLAIEY-NP---KLIIV----GGTA--YSRVWDWERFRSIADSIGAYLMADISHISG 213 (433)
Q Consensus 149 -~~y~~d~~~~~ID----~d~~~~~a~~~-kP---klIi~----G~S~--y~~~~d~~~l~eIa~~~ga~l~~D~aH~~G 213 (433)
.+|+ ++. ..+. ++.++++.+.. .| .-||+ |..- .+-+-=++++|++|+++|++|++|.-++ |
T Consensus 167 ~~~~p-~~~-~~~~~~~~~~~l~~~~~~~~~~~~iAAvi~EPiqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~t-G 243 (421)
T PRK06777 167 HALYP-NEL-YGVSVEEAISSVERLFRCDISPTQVAAILLEPIQGEGGFNIAPPEFVSALRTLCDEHGILLIADEVQT-G 243 (421)
T ss_pred ECCCC-CCC-CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEECCHHHHHHHHHHHHHCCCEEEECCCEE-C
T ss_conf 23689-722-46568999999999997505888589999835437888640999999999999998397797112110-6
Q ss_pred H-HHHHCCC-CCCCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHH
Q ss_conf 4-3200012-32200-23567404565225--674489833620565016646543223445566689999999973564
Q gi|254780349|r 214 L-VVGGQHP-SPVPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSE 288 (433)
Q Consensus 214 L-Ia~g~~~-~Pl~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~ 288 (433)
+ =.|..|- .-+.. .|++|.+ |.|.| |-++++.. + ++.+......+-++.+|+-+.+.||+++- |.++.
T Consensus 244 fGRtG~~fa~e~~gv~PDiv~~g--Kgl~gG~P~~av~~~-~-~i~~~~~~~~~~~Tf~G~pl~caaa~a~L--~~i~~- 316 (421)
T PRK06777 244 FARTGKLFAMEYYDTKVDLITMA--KSLGGGMPISAVTGR-A-DVMDAPLPGGLGGTYAGNPLAVAAALAVL--DVIAE- 316 (421)
T ss_pred CCCCCCCCHHHCCCCCCCEEEEC--CCCCCCCCEEEEEEC-H-HHHCCCCCCCCCCCCCCCHHHHHHHHHHH--HHHHH-
T ss_conf 77567843431587779788744--002587650789862-7-87525788763788998989999999999--99986-
Q ss_pred HHHHHHHHHHHHHHHHHHHHH----C--CCCCCCCCCCCCEEE-ECCCCCC---CC---HHHHHHHHHHCCEEEECCCCC
Q ss_conf 899999999888999999861----6--852334588898126-3166556---76---799999888567188037899
Q gi|254780349|r 289 FRDYAKQIVLNSQALAKKLQF----L--GFDIVSGGTDNHLML-VDLRSKR---MT---GKRAESILGRVSITCNKNSIP 355 (433)
Q Consensus 289 f~~Ya~qvv~NA~~La~~L~~----~--G~~vv~ggTd~H~vl-vdl~~~~---~~---G~~a~~~Le~~gI~~Nkn~iP 355 (433)
..+++|++.+.+.|.+ . -++.|..-.---+++ +++.+.. -+ ...+...+-+.|+++....
T Consensus 317 -----~~l~~~~~~~g~~l~~~L~~l~~~~p~v~dVRG~GL~~gie~~d~~~~~~~~~~~~~i~~~~~~~Glll~~~g-- 389 (421)
T PRK06777 317 -----EKLCERALILGAKLVEVLEKAQMSNAAIVGIRARGSMVAVEFNDPVTGKPSPELTRAYQRQALEEGLLLLSCG-- 389 (421)
T ss_pred -----CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECC--
T ss_conf -----3599999999999999999988558988986236489999971687789589999999999997898898458--
Q ss_pred CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 89999888985122466673079998999999999999960
Q gi|254780349|r 356 FDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 356 ~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
..++-|||.-| +| ..++|+++.-+++.++|.
T Consensus 390 ------~~~nvir~~PP-L~---it~~eid~~~~il~~aL~ 420 (421)
T PRK06777 390 ------VHGNVIRFLYP-LT---IPDKQFKKAMNILTRLLA 420 (421)
T ss_pred ------CCCCEEEEECC-CC---CCHHHHHHHHHHHHHHHC
T ss_conf ------99998999799-54---789999999999999974
No 261
>PRK01278 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional
Probab=98.55 E-value=3e-05 Score=57.07 Aligned_cols=266 Identities=16% Similarity=0.193 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHHHHH-------CCC-CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCC---CHHHHHHHH
Q ss_conf 016799999999831-------548-74881233448411147665433333220136-658323565---989999999
Q gi|254780349|r 102 HSGSQMNQGVFLALM-------HPG-DSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPY-NVRKEDGLL---DMHEIESLA 169 (433)
Q Consensus 102 ~SG~~An~av~~ALl-------~pG-D~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y-~~d~~~~~I---D~d~~~~~a 169 (433)
-||+-||.+++..-- +|+ .+|+++.-..=|.. . ...+.++.-.....| +..+....+ |.+++++.+
T Consensus 95 ~sGsEAve~AlklAr~~~~~~g~t~r~~ii~~~~~yHG~t-~-~~~s~sg~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~ 172 (389)
T PRK01278 95 NSGAEAVECAIKTARRYQYGKGHPERYRIITFEGAFHGRT-L-ATIAATGQEKYLEGFGPLVDGFDQVPFGDIEALKAAI 172 (389)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC-C-CCCCCCCCHHHCCCCCCCCCCEEECCCCCHHHHHHHH
T ss_conf 8748999999999999888539999728999888888676-3-5113578844336668998882467789789999862
Q ss_pred HHHCCCEEEEEC------CCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCCC-CCC-CCEEEECCCCCCCC
Q ss_conf 860466789705------524353637999988641797899186201244-320001232-200-23567404565225
Q gi|254780349|r 170 IEYNPKLIIVGG------TAYSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPSP-VPH-CHIVTTTTHKSLRG 240 (433)
Q Consensus 170 ~~~kPklIi~G~------S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~P-l~~-ADvvt~sTHKtl~G 240 (433)
.. +-.-+|+.. ..-+-+-=+++++++|+++|++|++|.-++ |+ =.|..|..- +.- .|++|.+ |.|.|
T Consensus 173 ~~-~iAaviiEPi~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEV~t-GfGRtG~~fa~e~~gv~PDiv~~g--K~l~g 248 (389)
T PRK01278 173 TP-NTAAILIEPIQGEGGIRPLPDEFLKGLRQLCDENGLLLIFDEVQC-GVGRTGKLFAHEWAGVTPDIMALA--KGIGG 248 (389)
T ss_pred CC-CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEC-CCCCCCCCCHHHCCCCCCCEEEEC--CCCCC
T ss_conf 88-817999968888889606999999999999986065387421000-777556642200367689867870--12468
Q ss_pred --CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--CCC-CC
Q ss_conf --6744898336205650166465432234455666899999999735648999999998889999998616--852-33
Q gi|254780349|r 241 --PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL--GFD-IV 315 (433)
Q Consensus 241 --PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~--G~~-vv 315 (433)
|-++++.+ + ++.+.++....-.+.+|.-....||+|+- +.++. ..+..++-+..+.|.+.|.+. -++ ++
T Consensus 249 G~P~sav~~~-~-ei~~~~~~g~~~~T~~gnp~~~aaala~L--~~i~~--~~l~~~v~~~G~~l~~~L~~l~~~~p~~i 322 (389)
T PRK01278 249 GFPLGACLAT-E-EAAKGMTPGTHGSTYGGNPLAMAVGNAVL--DVVLA--PGFLDNVQKMGLYLKQKLESLVDRFPDVI 322 (389)
T ss_pred CCCEEEEEEC-H-HHHHHCCCCCCCCCCCCCHHHHHHHHHHH--HHHHH--CCHHHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 8742799863-8-87854368876779997999999999999--99986--46999999999999999999987686713
Q ss_pred CCCCCCCEEE-ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 4588898126-316655676799999888567188037899899998889851224666730799989999999999999
Q gi|254780349|r 316 SGGTDNHLML-VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQI 394 (433)
Q Consensus 316 ~ggTd~H~vl-vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~ 394 (433)
..---.-+++ +++.. +..+...+|-+.|+++- |.. .+.||+- |.++ +.++|+.++-+.+.++
T Consensus 323 ~~vRG~Gl~~gie~~~---~~~~i~~~~~~~Gll~~----~~g------~~~lr~~-PpL~---it~~ei~~~~~~l~~a 385 (389)
T PRK01278 323 EEVRGEGLMLGLKCVV---PSRDLVAALRDEGLLTV----PAG------DNVVRLL-PPLI---ITEEEIDEALERLERA 385 (389)
T ss_pred EEEEEEEEEEEEEECC---CHHHHHHHHHHCCCEEE----ECC------CCEEEEE-CCCC---CCHHHHHHHHHHHHHH
T ss_conf 5564503699999458---89999999997993897----279------9979997-8813---9899999999999999
Q ss_pred HH
Q ss_conf 60
Q gi|254780349|r 395 LD 396 (433)
Q Consensus 395 L~ 396 (433)
|+
T Consensus 386 l~ 387 (389)
T PRK01278 386 AE 387 (389)
T ss_pred HH
T ss_conf 97
No 262
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase; InterPro: IPR010107 This entry represents Glutamate decarboxylase (gad;) it is a pyridoxal 5'-phosphate (PLP)-dependent enzyme, which catalyses the irreversible alpha-decarboxylation of L-glutamate to gamma-aminobutyrate (GABA). This enzyme is widely distributed amongst eukaryotes and prokaryotes, but its function varies in different organisms . Gad has a crucial role in the vertebrate central nervous system where it is responsible for the synthesis of GABA, the major inhibitory neurotransmitter. In the majority of vertebrates Gad occurs in two isoforms, GAD65 and GAD67, both active at neutral pH . Gad isoforms (GadA and GadB) have also been reported in some bacterial species, including the Gram-negative bacterium and Gram-positive bacterium . A unique feature of plant and yeast Gad is the presence of a calmodulin (CaM)-binding domain in the C-terminal region. In Saccharomyces cerevisiae, Gad expression is required for normal oxidative stress tolerance . In plants, Gad is thought to be a stress-adapter chaperonin sensing Ca2+ signals.; GO: 0004351 glutamate decarboxylase activity, 0030170 pyridoxal phosphate binding, 0006536 glutamate metabolic process.
Probab=98.54 E-value=2.1e-05 Score=58.12 Aligned_cols=343 Identities=20% Similarity=0.277 Sum_probs=229.4
Q ss_pred CHHHHHHHHHHHCHHH-HHHHHHHHHHH-HHCCCCCCC--CCCCCHHHHHHHHCCCCCCCC--CCCCCCCCCCCCHHHHH
Q ss_conf 0367764697858999-99999999999-838881043--010298999983051028865--79888753360067999
Q gi|254780349|r 6 KNRFFQQSLIESDPDV-FSLIGQESCRQ-NDEIQLIAS--ENIVSRAVLEAQGSILTNKYA--EGYPSKRYYGGCQYVDD 79 (433)
Q Consensus 6 ~~~~~~~~l~~~Dpei-~~~i~~e~~rq-~~~l~LiAS--EN~~S~~v~~~l~S~l~nkya--eG~pg~ryy~G~~~~d~ 79 (433)
|.+| +.++.+|+| ++||.+|+.-. .--||| || ..+|-|.|.++..-.|.=-+. +-||- | +-+
T Consensus 22 Ky~~---P~~~m~~~~AYqlI~DEL~LDGNprLNL-AsFV~Twme~EA~KLm~e~~~KN~ID~dEYPq------T--ar~ 89 (493)
T TIGR01788 22 KYEM---PEEEMPPDAAYQLIHDELSLDGNPRLNL-ASFVTTWMEPEAEKLMDETLNKNMIDKDEYPQ------T--ARE 89 (493)
T ss_pred CCCC---CCCCCCHHHHHHHHHHHCCCCCCHHHHH-HCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCH------H--HHH
T ss_conf 5538---6888887999887555404577622232-13247877767899997255777011001654------4--898
Q ss_pred HHHHHHHHHHHHCCCC-CEECCCHH-------HHH-HHHHHHHHH-----------HCCCC--E---EEECCCCCCCCCC
Q ss_conf 9999999999871886-30100001-------679-999999983-----------15487--4---8812334484111
Q gi|254780349|r 80 IENIAIERAKKLFNVN-FVNVQSHS-------GSQ-MNQGVFLAL-----------MHPGD--S---FMGLSLDSGGHLT 134 (433)
Q Consensus 80 iE~la~~~a~~lF~a~-~anvqp~S-------G~~-An~av~~AL-----------l~pGD--~---Il~~~l~~GGHls 134 (433)
||.-|+.-.-+||+|. +-|-++-| ||. |-|---+|+ -||.| | ||+.+..
T Consensus 90 i~~RCVnM~a~LfhAp~~~D~~~~savGtsTiGSSEAiMLGGlAmK~rWr~R~~~~Gk~~d~kKPNlv~g~~vQ------ 163 (493)
T TIGR01788 90 IENRCVNMLADLFHAPALKDEEAASAVGTSTIGSSEAIMLGGLAMKWRWRKRMKAAGKPADAKKPNLVMGSNVQ------ 163 (493)
T ss_pred HHHCCEEHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCE------
T ss_conf 85043012344114787778775664351773258999987777579999999863888787887236079861------
Q ss_pred CCCCCCCC--CCCCCC--CCCCCCC-CCCCCCHHHHHHHHHHHCCCEE-EEECCCCCCCCCHHHHHHHHH----------
Q ss_conf 47665433--333220--1366583-2356598999999986046678-970552435363799998864----------
Q gi|254780349|r 135 HGSSVNMS--GKWFKA--IPYNVRK-EDGLLDMHEIESLAIEYNPKLI-IVGGTAYSRVWDWERFRSIAD---------- 198 (433)
Q Consensus 135 hg~~~~~~--g~~~~~--~~y~~d~-~~~~ID~d~~~~~a~~~kPklI-i~G~S~y~~~~d~~~l~eIa~---------- 198 (433)
|..- -|+|++ ...++++ +.+.||.+++-+.+.|..--++ |+|.+.....-|++.+-+.=+
T Consensus 164 ----VCWEKF~RYfdVE~R~VP~~~r~r~~i~Pe~~~~~vDENTIGV~~ILG~TyTG~yE~v~~lnD~L~~~~~~~PDWs 239 (493)
T TIGR01788 164 ----VCWEKFARYFDVELREVPMDKRDRYVIDPEEVVDLVDENTIGVVAILGTTYTGEYEDVKALNDLLEELNAKTPDWS 239 (493)
T ss_pred ----EEECCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf ----6421220335540136720777760118899998607675248887472325870888999999999742788747
Q ss_pred HCCCEEEECCCCHHHHHHHHCCCCCC--------CCCCE-----------EEECCCCCCCCCCC-EEEEECCCC-HHHHC
Q ss_conf 17978991862012443200012322--------00235-----------67404565225674-489833620-56501
Q gi|254780349|r 199 SIGAYLMADISHISGLVVGGQHPSPV--------PHCHI-----------VTTTTHKSLRGPRG-GLIMTNHAD-LAKKI 257 (433)
Q Consensus 199 ~~ga~l~~D~aH~~GLIa~g~~~~Pl--------~~ADv-----------vt~sTHKtl~GPrg-GiI~~~~~e-~~~~i 257 (433)
.+...+++|+| .-|+|| || =+-|+ +-+|-||-=--+-| |-|++|++| |-+.|
T Consensus 240 g~d~PiHvDAA-SGGFi~------PFGfekehmk~~PDl~WDFRLprV~SINvSGHKYGLvYPGvGWViWRd~e~LPeEL 312 (493)
T TIGR01788 240 GWDIPIHVDAA-SGGFIA------PFGFEKEHMKVEPDLEWDFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEEL 312 (493)
T ss_pred CCCCCEEEECC-CCCCCC------CCCCCCCCEEECCCEEECCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHC
T ss_conf 78766477446-788113------76635341154571265661782468704655124647661268875811370131
Q ss_pred CHHH------CHHHH---HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC----C-CCCCCCCC----
Q ss_conf 6646------54322---34455666899999999735648999999998889999998616----8-52334588----
Q gi|254780349|r 258 NSAI------FPGLQ---GGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL----G-FDIVSGGT---- 319 (433)
Q Consensus 258 ~~av------fPg~q---g~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~----G-~~vv~ggT---- 319 (433)
=.-| .|.++ |.| -++|.|==--|.---.+.|+.=++.+..+|+.||+.+.+. | |+|++.|.
T Consensus 313 iF~vnYLGg~~~tFtLNFSrp-~~qViaQYYnFlRLG~~GYr~i~q~~~~vA~~La~~~~~~sklPG~Fe~~s~g~~sie 391 (493)
T TIGR01788 313 IFHVNYLGGDEPTFTLNFSRP-ANQVIAQYYNFLRLGREGYRKIMQNLLDVAQYLAEEIAKLSKLPGPFEILSDGRESIE 391 (493)
T ss_pred EEECCCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
T ss_conf 110110266565430135576-2311364466885040134899998999999999999986069984588717875433
Q ss_pred ------------------CCCEEEE--CCCC------CCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf ------------------8981263--1665------5676799999888567188037899899998889851224666
Q gi|254780349|r 320 ------------------DNHLMLV--DLRS------KRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPS 373 (433)
Q Consensus 320 ------------------d~H~vlv--dl~~------~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~a 373 (433)
+.|+=+| .|++ .+.|=.+.++.|..-|=+|=-=++|.+......--=+||
T Consensus 392 nDsaPksvkDYWehPqaY~~~~P~VaFrLKd~~~~~Y~~Yt~~~ls~~LR~rGWiVPAYtlP~~~~GsDd~~v~Ri---- 467 (493)
T TIGR01788 392 NDSAPKSVKDYWEHPQAYKSGIPLVAFRLKDDADEEYTGYTLYDLSHKLRERGWIVPAYTLPKNAEGSDDIEVLRI---- 467 (493)
T ss_pred CCCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEE----
T ss_conf 4567740123313641227897779885368778888767899999985034731347888433567787279999----
Q ss_pred HHHCCCCHH
Q ss_conf 730799989
Q gi|254780349|r 374 GTTRGFKEK 382 (433)
Q Consensus 374 iTtrG~~e~ 382 (433)
+-|.||+.+
T Consensus 468 VvRe~~~~d 476 (493)
T TIGR01788 468 VVREDFSRD 476 (493)
T ss_pred EECCCCCHH
T ss_conf 872589840
No 263
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=98.54 E-value=0.00016 Score=52.02 Aligned_cols=286 Identities=16% Similarity=0.161 Sum_probs=143.2
Q ss_pred HHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHH-------CCCC-EEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 999999999871886301000016799999999831-------5487-4881233448411147665433333220136-
Q gi|254780349|r 81 ENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALM-------HPGD-SFMGLSLDSGGHLTHGSSVNMSGKWFKAIPY- 151 (433)
Q Consensus 81 E~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl-------~pGD-~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y- 151 (433)
++||..+ .++.+.+.+- -.-|||-||.+++.--- .+|- +|+++.-..=|. |. ...++++.-.....|
T Consensus 84 ~~lae~L-~~~~~~~~v~-f~~sGseAvE~AiKlAr~y~~~~~~~~r~~ii~~~~syHG~-T~-ga~s~tg~~~~~~~~~ 159 (398)
T PRK02627 84 EELAEKL-VELSGMDKVF-FCNSGAEANEAAIKLARKYGHTKGGIEKPEIITAENSFHGR-TL-ATLSATGQPKYQKGFE 159 (398)
T ss_pred HHHHHHH-HHHCCCCEEE-EECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC-CC-CCCCCCCCCCCCCCCC
T ss_conf 9999999-7524998799-82877999999999999998864788886799953786999-75-1001378822236767
Q ss_pred CCCCCCCCC---CHHHHHHHHHHHCCCEEEEEC------CCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCC
Q ss_conf 658323565---989999999860466789705------524353637999988641797899186201244-3200012
Q gi|254780349|r 152 NVRKEDGLL---DMHEIESLAIEYNPKLIIVGG------TAYSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHP 221 (433)
Q Consensus 152 ~~d~~~~~I---D~d~~~~~a~~~kPklIi~G~------S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~ 221 (433)
+.-+....+ |.+++++.+...+..-||+.. -..+-+-=++++|++|+++|++|++|.-.+ |+ =.|..|-
T Consensus 160 p~~~~~~~~p~~d~~~l~~~~~~~~iAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~fa 238 (398)
T PRK02627 160 PLVPGFIYVPFNDIEALEAAINNPRTAAVLLEPIQGEGGVNPADKEYLQALRELCDENNILLILDEVQT-GMGRTGKLFA 238 (398)
T ss_pred CCCCCEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCC-CCCCCCCCHH
T ss_conf 888880562477299999984589879999827888889865888899999999865074077530001-7785565104
Q ss_pred C-CCCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
Q ss_conf 3-2200-23567404565225--674489833620565016646543223445566689999999973564899999999
Q gi|254780349|r 222 S-PVPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIV 297 (433)
Q Consensus 222 ~-Pl~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv 297 (433)
. -+.. .|+||. -|.|.| |=|+++.+ + ++.+.+.....-.+.+|.-....||+++ .+.++.+ .+.+++.
T Consensus 239 ~e~~gv~PDiv~~--gKgl~gG~Plsav~~~-~-~i~~~~~~g~h~~T~~gnpla~aaa~a~--L~~i~~~--~l~~~~~ 310 (398)
T PRK02627 239 YQHYGIEPDIMTL--AKGLGGGVPIGAVLAK-G-KAADVFTPGDHGSTFGGNPLACAAALAV--LDIIEEE--GLLENAA 310 (398)
T ss_pred HHCCCCCCCEEEE--CCCCCCCCCCCCEECC-H-HHHHHCCCCCCCCCCCCCHHHHHHHHHH--HHHHHHC--CHHHHHH
T ss_conf 3326978885776--0002488987124316-9-9996367998788899998999999999--9999864--8999999
Q ss_pred HHHHHHHHHHHHC--CCCCCCCCCCCCEEE-ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 8889999998616--852334588898126-3166556767999998885671880378998999988898512246667
Q gi|254780349|r 298 LNSQALAKKLQFL--GFDIVSGGTDNHLML-VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSG 374 (433)
Q Consensus 298 ~NA~~La~~L~~~--G~~vv~ggTd~H~vl-vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~ai 374 (433)
+..+.|.+.|.+. .++.+..-.-.-+++ +++.. +..+..+.+-+.|+++.... ++-||+. |.+
T Consensus 311 ~~g~~l~~~L~~l~~~~~~v~~vRG~Gl~~giel~~---~~~~~~~~~~~~Gll~~~~g----------~~~ir~~-PPL 376 (398)
T PRK02627 311 ERGEYLRAGLRELLEKYPIIKEVRGLGLMIGIELKR---PAKELVKKALEKGLLINVTG----------DNVLRLL-PPL 376 (398)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEECC---CHHHHHHHHHHCCCEEEECC----------CCEEEEE-CCC
T ss_conf 999999999999997199836773225799999678---79999999997897895079----------9989998-892
Q ss_pred HHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 3079998999999999999960
Q gi|254780349|r 375 TTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 375 TtrG~~e~em~~iA~li~~~L~ 396 (433)
| +.++|++++.+.+.++|+
T Consensus 377 ~---it~~eid~~~~~l~~al~ 395 (398)
T PRK02627 377 I---ISKEEIDELVDRLDEVLK 395 (398)
T ss_pred C---CCHHHHHHHHHHHHHHHH
T ss_conf 0---899999999999999999
No 264
>PRK07482 hypothetical protein; Provisional
Probab=98.54 E-value=0.00016 Score=52.00 Aligned_cols=285 Identities=16% Similarity=0.181 Sum_probs=142.6
Q ss_pred HHHHHHHCCCCCEECC-CHHHHHHHHHHHHHH-------HCC-CCEEEECCCCCCCCCCCCCC---CCCCCCC-------
Q ss_conf 9999987188630100-001679999999983-------154-87488123344841114766---5433333-------
Q gi|254780349|r 85 IERAKKLFNVNFVNVQ-SHSGSQMNQGVFLAL-------MHP-GDSFMGLSLDSGGHLTHGSS---VNMSGKW------- 145 (433)
Q Consensus 85 ~~~a~~lF~a~~anvq-p~SG~~An~av~~AL-------l~p-GD~Il~~~l~~GGHlshg~~---~~~~g~~------- 145 (433)
.++..+++....--|. ..||+-||.+++... -+| ..+|+++.-.. ||.. .++++..
T Consensus 100 Ae~L~~~~p~~l~~v~f~~SGSEAvE~AiKlAr~y~~~~g~~~r~~Iis~~~sy-----HG~T~~a~s~tg~~~~~~~~~ 174 (461)
T PRK07482 100 SKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGY-----HGSGIVTGSLTGLSLFHQHFD 174 (461)
T ss_pred HHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC-----CCCCCCCCCCCCCCCCCCCCC
T ss_conf 999997578886879961866999999999999998861887654599961785-----567531300246633346667
Q ss_pred -------CCCCCCCC---CCCCCCCC-----HHHHHHHHHHHCCC---EEEE----E--CCCCCCCCCHHHHHHHHHHCC
Q ss_conf -------22013665---83235659-----89999999860466---7897----0--552435363799998864179
Q gi|254780349|r 146 -------FKAIPYNV---RKEDGLLD-----MHEIESLAIEYNPK---LIIV----G--GTAYSRVWDWERFRSIADSIG 201 (433)
Q Consensus 146 -------~~~~~y~~---d~~~~~ID-----~d~~~~~a~~~kPk---lIi~----G--~S~y~~~~d~~~l~eIa~~~g 201 (433)
....||.. ++.....+ .+.+++++.+..|. -||+ | +-..+-+-=++++|++||++|
T Consensus 175 ~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvI~EPi~g~gG~~~p~~~yl~~lr~lc~~~g 254 (461)
T PRK07482 175 LPIDRVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIGEPVLGTGGIVPPPAGYWEAIQAVLKKYD 254 (461)
T ss_pred CCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 99878322468854567886633777789999999999985098848999805635768855188789799999962459
Q ss_pred CEEEECCCCHHHH-HHHHCCC-CCCCC-CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCCHHH-C--HH----HHHH
Q ss_conf 7899186201244-3200012-32200-23567404565225---674489833620565016646-5--43----2234
Q gi|254780349|r 202 AYLMADISHISGL-VVGGQHP-SPVPH-CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKINSAI-F--PG----LQGG 268 (433)
Q Consensus 202 a~l~~D~aH~~GL-Ia~g~~~-~Pl~~-ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~av-f--Pg----~qg~ 268 (433)
.+|++|.=++ |+ =.|..|- .-+.- .|++|. -|.|.| |=++++..+ ++.+.++..- . |. +.+|
T Consensus 255 ilLI~DEV~t-GfGRtG~~fa~e~~gv~PDiv~~--gKgl~gG~~Pl~av~~~~--~i~~~~~~~~~~~~~~~h~~T~~G 329 (461)
T PRK07482 255 ILLIADEVVT-GFGRLGSMFGSQHYGIEPDLITI--AKGLTSAYAPLSGSIVGE--KVWDVLEQGSDEHGAMGHGWTYSG 329 (461)
T ss_pred CEEEECCCEE-CCCCCCCCCHHCCCCCCCCEEEE--CCCCCCCCCCEEEEEECH--HHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 6377154432-47503584111168999977763--244457767627998568--899876326544666401568999
Q ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCEEE-ECCC---C--CCCC-----H
Q ss_conf 455666899999999735648999999998889999998616--852334588898126-3166---5--5676-----7
Q gi|254780349|r 269 PFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL--GFDIVSGGTDNHLML-VDLR---S--KRMT-----G 335 (433)
Q Consensus 269 ~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~--G~~vv~ggTd~H~vl-vdl~---~--~~~~-----G 335 (433)
.-+..-||+|+ .+.++. ..+.+++-+..+.|.+.|.+. .+++|..-.-.-+++ +++. . ..++ +
T Consensus 330 nPlacAaa~a~--L~~l~~--~~l~~~~~~~G~~l~~~L~~~~~~~p~v~~VRG~GL~~gvelv~~~~~~~~~~~~~~~~ 405 (461)
T PRK07482 330 HPICAAAALAN--LDILER--ENLVGNAGEVGAYFRAQLRAAFGGHPLVGEVRGVGMLAAVEFVADRDDRTFFDPALKIG 405 (461)
T ss_pred CHHHHHHHHHH--HHHHHH--CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEEECCCCCCCCCHHHHHH
T ss_conf 98999999999--999830--62999999999999999999985499878888067589999950565466667457999
Q ss_pred HHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9999988856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 336 KRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 336 ~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
..+.+.|-+.|+++. ..|.. +-||+- |.+| +.++|++++.+++.++|+
T Consensus 406 ~~i~~~~~~~Gll~~--~~~~g-------~vl~~~-PPL~---Is~~eid~~~~~l~~al~ 453 (461)
T PRK07482 406 PQVSAAALERGVIAR--AMPHG-------DILGFA-PPLV---LTRAEADEIVAIAAKAVD 453 (461)
T ss_pred HHHHHHHHHCCCEEE--ECCCC-------CEEEEE-CCEE---CCHHHHHHHHHHHHHHHH
T ss_conf 999999997898896--05999-------989997-9940---889999999999999999
No 265
>PRK08555 consensus
Probab=98.53 E-value=0.00013 Score=52.57 Aligned_cols=180 Identities=22% Similarity=0.249 Sum_probs=91.6
Q ss_pred CCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCC-CCCCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCHHHC
Q ss_conf 637999988641797899186201244-3200012-32200-23567404565225--6744898336205650166465
Q gi|254780349|r 188 WDWERFRSIADSIGAYLMADISHISGL-VVGGQHP-SPVPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINSAIF 262 (433)
Q Consensus 188 ~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~-~Pl~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~avf 262 (433)
-=+++++++|+++|+++++|.-++ |+ =-|..|- +-+.- .|+||.+ |.|.| |-+++++.++ +.... ....
T Consensus 243 ~yl~~l~~lc~~~gillI~DEV~t-GfGRtG~~fa~e~~gv~PDiv~~g--Kgl~~G~Pl~av~~~~e--~~~~~-~~~h 316 (443)
T PRK08555 243 NFFKELKKLADKYGILLIDDEVQM-GLGRTGKMFAIEHFGVEPDIITLA--KALGGGIPIGATIFRAD--LDFKK-PGLH 316 (443)
T ss_pred HHHHHHHHHHHHCCCEEECCCCCC-CCCCCCCCCEECCCCCCCCEEEEC--CCCCCCCCEEEEEEHHH--HCCCC-CCCC
T ss_conf 887899999997494696354412-787024741231688899889977--42448875089998245--35577-7773
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCCCCCCCCEEE-ECCCC----C
Q ss_conf 432234455666899999999735648999999998889999998616------852334588898126-31665----5
Q gi|254780349|r 263 PGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL------GFDIVSGGTDNHLML-VDLRS----K 331 (433)
Q Consensus 263 Pg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~------G~~vv~ggTd~H~vl-vdl~~----~ 331 (433)
=.+.+|.-+..-||+|+ .+.++ .+.+.|++.+.+.|.++ .+++++.-----+++ +++.+ +
T Consensus 317 ~~T~~gnpla~aaa~a~--L~~i~-------e~l~~~~~~~g~~l~~~L~~l~~~~~~v~dvRG~Gl~~gielv~~~~~~ 387 (443)
T PRK08555 317 SNTFGGNALASAAGLAV--IEEIK-------EGLLENVQKLGKYFRERLEELKEKYEIIGDVRGLGLAWAIEFVKDRKTK 387 (443)
T ss_pred CCCCCCCHHHHHHHHHH--HHHHH-------HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCC
T ss_conf 76888548999999999--99999-------7799999999999999999988619977872326679999982377656
Q ss_pred CCCHHH---HHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 676799---99988856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 332 RMTGKR---AESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 332 ~~~G~~---a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
.-.... ....+-+.|+++.... .+.||+- |.+| +.++|+.++.+++.++|+
T Consensus 388 ~~~~~~~~~i~~~~~~~Gll~~~~g----------~n~ir~~-PPL~---it~~eid~~~~~l~~al~ 441 (443)
T PRK08555 388 EPNPKLRDRVVVEAFKRGLILLGCG----------KSAIRLI-PPLI---ISEEEAKIGLEILEEAIK 441 (443)
T ss_pred CCCHHHHHHHHHHHHHCCEEEEECC----------CCEEEEE-CCCC---CCHHHHHHHHHHHHHHHH
T ss_conf 7798999999999997890997379----------9989997-7943---889999999999999996
No 266
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=98.53 E-value=0.00017 Score=51.90 Aligned_cols=284 Identities=16% Similarity=0.191 Sum_probs=138.4
Q ss_pred HHHHHHCCCCCEE--CCCHHHHHHHHHHHHHH-HCC-CCEEEECCCCCCCCCCCCCCCCCCCC-------------CCCC
Q ss_conf 9999871886301--00001679999999983-154-87488123344841114766543333-------------3220
Q gi|254780349|r 86 ERAKKLFNVNFVN--VQSHSGSQMNQGVFLAL-MHP-GDSFMGLSLDSGGHLTHGSSVNMSGK-------------WFKA 148 (433)
Q Consensus 86 ~~a~~lF~a~~an--vqp~SG~~An~av~~AL-l~p-GD~Il~~~l~~GGHlshg~~~~~~g~-------------~~~~ 148 (433)
++..+++...+.+ +=.-||+-||.+++..- ..+ ..+|+++.-..=|.. . ...+++|. .+..
T Consensus 88 e~L~~~~p~~~~~~~~F~~SGsEAvE~AiKlAr~~tgr~~iis~~~~yHG~T-~-~a~s~tg~~~~~~~~~~~~~~~~~~ 165 (422)
T PRK07495 88 ERLNALVPGDFEKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRT-F-MGMALTGKVVPYKVGFGAMPPDVFH 165 (422)
T ss_pred HHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCC-H-HHHHHCCCCCCCCCCCCCCCCCCEE
T ss_conf 9999756877454799727862599999997565279987999878877864-2-1243138876543567889999367
Q ss_pred CCCCCCCCCCCC--CHHHHHHHHHHH-CCC---EEEE------ECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-H
Q ss_conf 136658323565--989999999860-466---7897------05524353637999988641797899186201244-3
Q gi|254780349|r 149 IPYNVRKEDGLL--DMHEIESLAIEY-NPK---LIIV------GGTAYSRVWDWERFRSIADSIGAYLMADISHISGL-V 215 (433)
Q Consensus 149 ~~y~~d~~~~~I--D~d~~~~~a~~~-kPk---lIi~------G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-I 215 (433)
+||+.+...... ..+.++++.+.. .|. -+|+ |+...|-+-=++++|++||++|.+|++|.-++ |+ =
T Consensus 166 ~p~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iAAvIvEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~T-GfGR 244 (422)
T PRK07495 166 VPFPVELHGVSVDQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQT-GFAR 244 (422)
T ss_pred ECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHCCCEEECCCCCC-CCCC
T ss_conf 078832357766779999999987516877578999667647888663888999999999987396687763010-8876
Q ss_pred HHHCCC-CCCCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
Q ss_conf 200012-32200-23567404565225--674489833620565016646543223445566689999999973564899
Q gi|254780349|r 216 VGGQHP-SPVPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRD 291 (433)
Q Consensus 216 a~g~~~-~Pl~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~ 291 (433)
-|..|- +-+.- .|++|.+ |.|.| |=|+++.. + ++.+.....-+-++.+|+-+...||+++ +.. ++.
T Consensus 245 tG~~fa~e~~gv~PDiv~~g--Kgl~gG~Pl~av~~~-~-~i~~~~~~~~~~~Tf~Gnpla~aaa~a~-L~i-~~~---- 314 (422)
T PRK07495 245 TGKLFAMEHHEVAADLTTMA--KSLAGGFPLAAVTGR-A-EIMDAPGPGGLGGTYGGNPLGIAAAHAV-LDV-IEE---- 314 (422)
T ss_pred CCCCHHHHCCCCCCCEEEEC--HHHHCCCCCEEEEEC-H-HHHHCCCCCCCCCCCCCCHHHHHHHHHH-HHH-HHH----
T ss_conf 65502654489998099964--154288751688873-9-9883558888666799898999999999-999-986----
Q ss_pred HHHHHHHHHHHHHHHHHHC------CCCCCCCCCCCCEEE-ECCCC---CCC---CHHHHHHHHHHCCEEEECCCCCCCC
Q ss_conf 9999998889999998616------852334588898126-31665---567---6799999888567188037899899
Q gi|254780349|r 292 YAKQIVLNSQALAKKLQFL------GFDIVSGGTDNHLML-VDLRS---KRM---TGKRAESILGRVSITCNKNSIPFDP 358 (433)
Q Consensus 292 Ya~qvv~NA~~La~~L~~~------G~~vv~ggTd~H~vl-vdl~~---~~~---~G~~a~~~Le~~gI~~Nkn~iP~D~ 358 (433)
.++++|++.+.+.|.++ -++.+..---.-+++ +++.. ..- -..++...+-+.|+++..+..-
T Consensus 315 --~~l~~~~~~~g~~l~~~L~~l~~~~p~v~dvRG~GLm~giel~~~~~~~p~~~~~~~v~~~~~~~Gll~~~~g~~--- 389 (422)
T PRK07495 315 --EDLCERANQLGNRLKQRLASIRETVPEIADIRGPGFMNAVEFNDADTGLPSAEFANRVRLEALEKGLILLTCGVH--- 389 (422)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCC---
T ss_conf --489999999999999999999854998898862456999998338888978899999999999779889834889---
Q ss_pred CCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99888985122466673079998999999999999960
Q gi|254780349|r 359 ESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 359 ~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
++-||+. |++| +.++|+.++-+.|.++|.
T Consensus 390 -----~nvi~~~-PPL~---it~~eid~~~~~l~~aL~ 418 (422)
T PRK07495 390 -----GNVIRFL-APIT---IQDEVFGEALDILEASIL 418 (422)
T ss_pred -----CCEEEEE-CCCC---CCHHHHHHHHHHHHHHHH
T ss_conf -----9989997-9902---579999999999999999
No 267
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.53 E-value=0.00014 Score=52.35 Aligned_cols=285 Identities=15% Similarity=0.180 Sum_probs=136.0
Q ss_pred CHHHHHHHHHHHHHH-------HCCCC-EEEECCCCCCCCCCCCCCCCCCC----------CC--CCCCCCC--CCCCCC
Q ss_conf 001679999999983-------15487-48812334484111476654333----------33--2201366--583235
Q gi|254780349|r 101 SHSGSQMNQGVFLAL-------MHPGD-SFMGLSLDSGGHLTHGSSVNMSG----------KW--FKAIPYN--VRKEDG 158 (433)
Q Consensus 101 p~SG~~An~av~~AL-------l~pGD-~Il~~~l~~GGHlshg~~~~~~g----------~~--~~~~~y~--~d~~~~ 158 (433)
.-|||-||.+++..- .+||- +|+++.-..=|.. .| ..++++ .. ...+|++ +....+
T Consensus 113 ~~SGSEAvE~AiKlAr~y~~~~g~~gr~~iis~~~sYHG~T-~g-a~s~~~~~~~~~~~~p~~~~~~~~p~p~~~~~~~g 190 (467)
T PRK07030 113 ADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGET-IA-AMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEG 190 (467)
T ss_pred ECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC-HH-HHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
T ss_conf 37848999999999999999808988707987337343421-77-77634870114787787888667589864356678
Q ss_pred -------CCCHHHHHHHHHHHCCC--EEEEEC-----CCC--CCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCC
Q ss_conf -------65989999999860466--789705-----524--353637999988641797899186201244-3200012
Q gi|254780349|r 159 -------LLDMHEIESLAIEYNPK--LIIVGG-----TAY--SRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHP 221 (433)
Q Consensus 159 -------~ID~d~~~~~a~~~kPk--lIi~G~-----S~y--~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~ 221 (433)
.-.++.+++.+.+...+ -||+.. ... +-+-=++++|+|||++|.+|++|.=. .|+ =.|..|-
T Consensus 191 ~~~~~~~~~~~~~le~~l~~~~~~iAAvi~EPiiqg~GG~~~~~~~yl~~lr~lc~~~giLlI~DEV~-tGfGRTG~~fa 269 (467)
T PRK07030 191 MSWEEHSRNMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIA-VGFGRTGTMFA 269 (467)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCE-ECCCCCCCCCC
T ss_conf 88899999999999999984799746999823233679972799899999999997559468725003-17862458532
Q ss_pred CC-CCC-CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCCH--H---HCH--HHHHHHHHHHHHHHHHHHHHHHCHHH
Q ss_conf 32-200-23567404565225---6744898336205650166--4---654--32234455666899999999735648
Q gi|254780349|r 222 SP-VPH-CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKINS--A---IFP--GLQGGPFMHSIAAKAVAFGEALSSEF 289 (433)
Q Consensus 222 ~P-l~~-ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~--a---vfP--g~qg~~~~~~iaa~aval~Ea~~~~f 289 (433)
.- ..- .|++|. -|.|.| |=|+++.+ + ++++.+.. . .|. ++.+|+-+..-||+|+- +.++.
T Consensus 270 ~e~~gv~PDiit~--aKgl~gG~~Pl~av~~~-~-~I~~~~~~~~~~~~~~~Hg~Ty~GnPlacAAala~L--~ii~~-- 341 (467)
T PRK07030 270 CEQAGIRPDFLCL--SKALTGGYLPLAAVLTT-D-TVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATL--DIFEQ-- 341 (467)
T ss_pred CCCCCCCCCEEEE--ECCCCCCCCCEEEEEEC-H-HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH--HHHHH--
T ss_conf 0056789988997--04311687753899874-8-999876325655557675889997999999999999--99997--
Q ss_pred HHHHHHHHHHHHHHHHHHHHC-----CCCCCCCCCCCCEEE-ECC-CCC----CC-----CHHHHHHHHHHCCEEEECCC
Q ss_conf 999999998889999998616-----852334588898126-316-655----67-----67999998885671880378
Q gi|254780349|r 290 RDYAKQIVLNSQALAKKLQFL-----GFDIVSGGTDNHLML-VDL-RSK----RM-----TGKRAESILGRVSITCNKNS 353 (433)
Q Consensus 290 ~~Ya~qvv~NA~~La~~L~~~-----G~~vv~ggTd~H~vl-vdl-~~~----~~-----~G~~a~~~Le~~gI~~Nkn~ 353 (433)
.+.++|++.+.+.|.+. .++.|..-----+++ |++ +++ .+ .+.++.+.+-+.|+++..
T Consensus 342 ----e~l~~~~~~~g~~l~~~l~~l~~~p~VgdVRG~GL~~giElv~d~~t~~p~~~~~~~~~~v~~~~~~~G~l~~~-- 415 (467)
T PRK07030 342 ----DNVIEANRALARRMAEATAHLADHPHVAEVRQTGMALAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRP-- 415 (467)
T ss_pred ----CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEE--
T ss_conf ----68999999999999999998707997588834751999997037876788854667999999999978988973--
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9989999888985122466673079998999999999999960257762117999999999999997087
Q gi|254780349|r 354 IPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDGSSSDEENHSLELTVLHKVQEFVHCFP 423 (433)
Q Consensus 354 iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~~~~~~~~~~~~~~ir~~V~~l~~~fP 423 (433)
. .+-|||--| ++ +.++|++++.+++.++|+... ...+--.|.++...|-
T Consensus 416 --~-------gnvi~~~PP-L~---it~~eid~~~~~l~~al~~a~--------~e~v~~~~~~~~~~~~ 464 (467)
T PRK07030 416 --L-------GSVVYFLPP-YV---ITPEQIDFLAEVASEGIDIAT--------RDSVSVAVSDFHPDFR 464 (467)
T ss_pred --C-------CCEEEEECC-CC---CCHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHCCCCCCC
T ss_conf --4-------999999799-27---899999999999999999999--------8677776521376678
No 268
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.52 E-value=1.8e-05 Score=58.69 Aligned_cols=280 Identities=20% Similarity=0.320 Sum_probs=156.4
Q ss_pred CCCCCCHHHHHHHHHHHCHHHHHHHHH--H--HHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 976520367764697858999999999--9--999983888104301029899998305102886579888753360067
Q gi|254780349|r 1 MTIICKNRFFQQSLIESDPDVFSLIGQ--E--SCRQNDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQY 76 (433)
Q Consensus 1 m~~~~~~~~~~~~l~~~Dpei~~~i~~--e--~~rq~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~ 76 (433)
|++..+..-..+.+++...++..+.+. | +.-|.+.|+-.- + .....|.|++..--||..- |-
T Consensus 2 ~~~~~~~~~~~k~~~~ae~~l~~~f~~ide~~~~Nq~kVL~AF~-~-------~rvs~~hf~~stGYGydD~----GR-- 67 (416)
T COG4100 2 FNTYTENETILKLLRQAEQDLAPIFKEIDEIAEYNQKKVLEAFR-H-------HRVSESHFTGSTGYGYDDL----GR-- 67 (416)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-------CCCCHHCCCCCCCCCCCCC----CH--
T ss_conf 41678888999999999998898887789999987999999998-5-------4353002578887776532----26--
Q ss_pred HHHHHHHHHHHHHHHCCCCCEECC--CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC--CCCC----CCC--CCCCC
Q ss_conf 999999999999987188630100--0016799999999831548748812334484111--4766----543--33332
Q gi|254780349|r 77 VDDIENIAIERAKKLFNVNFVNVQ--SHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLT--HGSS----VNM--SGKWF 146 (433)
Q Consensus 77 ~d~iE~la~~~a~~lF~a~~anvq--p~SG~~An~av~~ALl~pGD~Il~~~l~~GGHls--hg~~----~~~--~g~~~ 146 (433)
|.+|. --...||++-|-|| -.||+.|-..++.++++|||.+|..--.-=--|- -|-. .++ -+..|
T Consensus 68 -dtLe~----vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y 142 (416)
T COG4100 68 -DTLER----VYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKY 142 (416)
T ss_pred -HHHHH----HHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCHHHHCCCE
T ss_conf -67999----9999855410023105523602999999842688874777528860568987562777854278738550
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCC-CC-CC-C---CHHHHHHHHHHC--CCEEEECCCCHHHHHHHH
Q ss_conf 2013665832356598999999986046678970552-43-53-6---379999886417--978991862012443200
Q gi|254780349|r 147 KAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTA-YS-RV-W---DWERFRSIADSI--GAYLMADISHISGLVVGG 218 (433)
Q Consensus 147 ~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~-y~-~~-~---d~~~l~eIa~~~--ga~l~~D~aH~~GLIa~g 218 (433)
+.++.. .++.|||+.+.+-+ ..+.|||-+-.|. |. || + +++++-.+.+++ +.++.+|.. -|
T Consensus 143 ~~v~Lt---~~gkiD~~~v~~~i-~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNC-------YG 211 (416)
T COG4100 143 KAVPLT---ADGKIDIQAVKTAI-SDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNC-------YG 211 (416)
T ss_pred EECCCC---CCCCCCHHHHHHHC-CCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECC-------CH
T ss_conf 021356---68823389998750-85525999973257677886429999999999984499779998056-------36
Q ss_pred CC---CCCCCC-CCEEEECCCCCCCCC---CCEEEEECCCCHHHHCC-HHHCHHH--HHHHHHHHHHHHHHHHHHHHCHH
Q ss_conf 01---232200-235674045652256---74489833620565016-6465432--23445566689999999973564
Q gi|254780349|r 219 QH---PSPVPH-CHIVTTTTHKSLRGP---RGGLIMTNHADLAKKIN-SAIFPGL--QGGPFMHSIAAKAVAFGEALSSE 288 (433)
Q Consensus 219 ~~---~~Pl~~-ADvvt~sTHKtl~GP---rgGiI~~~~~e~~~~i~-~avfPg~--qg~~~~~~iaa~aval~Ea~~~~ 288 (433)
.| .-|..- ||++.+|.-|.-.|- .||-|..+. +|-+.-. +-.-||. -+|.- .-++.|+.+-.
T Consensus 212 EFvE~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~-~~ve~~~yRlTaPGIG~e~Gat-------~~~l~~myqGl 283 (416)
T COG4100 212 EFVEEKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKA-ELVEAAAYRLTAPGIGREGGAT-------LYSLREMYQGL 283 (416)
T ss_pred HHHHCCCCCCCCHHHHCCCEEECCCCCEEECCCEEECHH-HHHHHHCEEEECCCCCCCCCCC-------HHHHHHHHHHH
T ss_conf 554114863005334203213279986651164552468-8987641254268766433401-------88999997352
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 8--99999999888999999861685233458
Q gi|254780349|r 289 F--RDYAKQIVLNSQALAKKLQFLGFDIVSGG 318 (433)
Q Consensus 289 f--~~Ya~qvv~NA~~La~~L~~~G~~vv~gg 318 (433)
| ..-..|-++.|.-.|.-|.+.||++-.-+
T Consensus 284 FlAPhvv~qa~Kga~fta~~le~lg~~~~P~~ 315 (416)
T COG4100 284 FLAPHVVSQAVKGAHFTARFLEKLGFPVNPKY 315 (416)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 12538889886134889999998199889765
No 269
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase; InterPro: IPR013441 Tyrosine phenol-lyases (4.1.99.2 from EC) (beta-tyrosinase), are pyridoxal-phosphate enzymes which are closely related to tryptophanase (4.1.99.1 from EC) (see IPR013441 from INTERPRO). Both belong to the beta-eliminating lyase family.; GO: 0050371 tyrosine phenol-lyase activity.
Probab=98.52 E-value=3.5e-05 Score=56.58 Aligned_cols=347 Identities=18% Similarity=0.265 Sum_probs=223.5
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHH
Q ss_conf 10430102989999830510288-65798887533600679999999999999871886301000016799999999831
Q gi|254780349|r 38 LIASENIVSRAVLEAQGSILTNK-YAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALM 116 (433)
Q Consensus 38 LiASEN~~S~~v~~~l~S~l~nk-yaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl 116 (433)
|.-||.+--......-.+.++.| ++--.-|..-|+|.+.+-.+|. ..+++||.+|+ |-.|.|--|...+-.-++
T Consensus 33 ll~s~~~yidlltdsGt~amsd~qW~~lm~GdeayaG~~~f~~l~~----~v~e~yGfk~~-vPthqGrGae~l~s~~~i 107 (450)
T TIGR02618 33 LLNSEDVYIDLLTDSGTNAMSDKQWAGLMMGDEAYAGSRNFFHLEE----VVRELYGFKYV-VPTHQGRGAENLLSRILI 107 (450)
T ss_pred EECCCCEEEEEECCCCCCHHHHHHHHHHEECCHHHHHHHHHHHHHH----HHHHHCCCEEE-ECCCCCCCHHHHHHHHHC
T ss_conf 4302313566320356301111212210011102232588899999----99987172256-306677647889988631
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCC-CCCCCCCHHHHHHHHHHHCC-C--EEEEECCCC---
Q ss_conf 5487488123344841114766543333322-----0136658-32356598999999986046-6--789705524---
Q gi|254780349|r 117 HPGDSFMGLSLDSGGHLTHGSSVNMSGKWFK-----AIPYNVR-KEDGLLDMHEIESLAIEYNP-K--LIIVGGTAY--- 184 (433)
Q Consensus 117 ~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~-----~~~y~~d-~~~~~ID~d~~~~~a~~~kP-k--lIi~G~S~y--- 184 (433)
+|||-|-+.---. ---.|... -.+.+.+ .+.-.++ +-.|.||..++++++.+.-- + .|.+.-++.
T Consensus 108 kPG~y~~Gnmyft-ttr~hqe~--~G~~fvd~~~deahd~~~~~~fkG~~d~~kl~~lid~~Ga~~i~yi~~a~tvnlaG 184 (450)
T TIGR02618 108 KPGDYVPGNMYFT-TTRAHQEK--NGATFVDIIIDEAHDAQLDLPFKGNVDVKKLQKLIDEVGADKIPYICLAVTVNLAG 184 (450)
T ss_pred CCCCCCCCCEEEE-EHHHHHHH--CCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECC
T ss_conf 6887013540011-00113420--58769998742344533673435750089999998540411024366666765058
Q ss_pred CCC---CCHHHHHHHHHHCCCEEEECCCCHHHH---H-----------HHHCCCCCCCCCCEEEECCCCCCCCCCCEEEE
Q ss_conf 353---637999988641797899186201244---3-----------20001232200235674045652256744898
Q gi|254780349|r 185 SRV---WDWERFRSIADSIGAYLMADISHISGL---V-----------VGGQHPSPVPHCHIVTTTTHKSLRGPRGGLIM 247 (433)
Q Consensus 185 ~~~---~d~~~l~eIa~~~ga~l~~D~aH~~GL---I-----------a~g~~~~Pl~~ADvvt~sTHKtl~GPrgGiI~ 247 (433)
..| .++.+++++|+++|..+++|+....-- | .......-+.|+|=.|.|..|---=--||++.
T Consensus 185 GqPvsman~r~v~~~~~~hGi~~~~datr~venayfike~e~~y~~~~~~~i~~em~sy~dGCtmsGkkdClvniGGfl~ 264 (450)
T TIGR02618 185 GQPVSMANLREVRKLCEKHGIKVFYDATRCVENAYFIKEREEGYKDKSIKEILKEMMSYADGCTMSGKKDCLVNIGGFLC 264 (450)
T ss_pred CCCHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEE
T ss_conf 87302787899999986468177621245566556443123000110589999998764056512476411565052467
Q ss_pred ECCCCHHHHCCHHH--CHHH--HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
Q ss_conf 33620565016646--5432--2344556668999999997356489999999988899999986168523345888981
Q gi|254780349|r 248 TNHADLAKKINSAI--FPGL--QGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHL 323 (433)
Q Consensus 248 ~~~~e~~~~i~~av--fPg~--qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~ 323 (433)
.|++++.++-...| |-|+ -||.----+-|+|+.+.|+.+ .+|.+.-|...+.|++.|.+.|++||. ---.|-
T Consensus 265 ~n~~~~~~~a~e~vv~~eGmP~yGGlaGrdmea~a~G~~e~~~---~~yi~hr~~q~~yl~~~l~~aG~Piv~-P~GGha 340 (450)
T TIGR02618 265 MNDDELFQKAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVD---YEYIEHRVKQVRYLGDKLKAAGVPIVK-PVGGHA 340 (450)
T ss_pred ECHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHCCCCEEE-CCCCCH
T ss_conf 5228998620564899716676576542008999988898876---799999999999999999855982440-477400
Q ss_pred EEECCCCC-------CCCHHHH---------HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHH
Q ss_conf 26316655-------6767999---------9988856718803789989999888985122466673079998999999
Q gi|254780349|r 324 MLVDLRSK-------RMTGKRA---------ESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYI 387 (433)
Q Consensus 324 vlvdl~~~-------~~~G~~a---------~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~i 387 (433)
|++|.+.+ .+..+.. -+.+|+-=|...||..-+....|-. .-+||- +-||=+...+|..+
T Consensus 341 vflda~~f~~h~~q~~fPaq~laa~~y~~~Gvr~merGi~saGr~~~tG~~~~Pkl-e~vrlt---iPrrvyt~~h~d~v 416 (450)
T TIGR02618 341 VFLDARKFLPHIPQDQFPAQALAAAIYVESGVRSMERGIVSAGRNKKTGEHHRPKL-ELVRLT---IPRRVYTYAHLDVV 416 (450)
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCEECCCCCCCCCCCCCCE-EEEEEE---CCCHHHHHHHHHHH
T ss_conf 24448888631453334078899888774041112123012377755765458842-567652---26123457788899
Q ss_pred HHHHHHHHHCCCC
Q ss_conf 9999999602577
Q gi|254780349|r 388 GELIAQILDGSSS 400 (433)
Q Consensus 388 A~li~~~L~~~~~ 400 (433)
|+-|....+...+
T Consensus 417 a~~~~~l~~~~~~ 429 (450)
T TIGR02618 417 ADSIIKLYKHRDD 429 (450)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999840210
No 270
>PRK09792 PLP-dependent GABA aminotransferase; Provisional
Probab=98.49 E-value=8.4e-05 Score=53.96 Aligned_cols=268 Identities=16% Similarity=0.198 Sum_probs=127.6
Q ss_pred HHHHHHHHHHHHHH-HCC-CCEEEECCCCCCCCCCCCCCCCCCCC-------------CCCCCCCCCCCC--CCCCCHHH
Q ss_conf 01679999999983-154-87488123344841114766543333-------------322013665832--35659899
Q gi|254780349|r 102 HSGSQMNQGVFLAL-MHP-GDSFMGLSLDSGGHLTHGSSVNMSGK-------------WFKAIPYNVRKE--DGLLDMHE 164 (433)
Q Consensus 102 ~SG~~An~av~~AL-l~p-GD~Il~~~l~~GGHlshg~~~~~~g~-------------~~~~~~y~~d~~--~~~ID~d~ 164 (433)
-||+-||.+++.-- .-. ..+|+++.-..=|+ |.+ ..+++|. ....+||+.+.. +..=+.|.
T Consensus 108 ~SGsEAvE~AiKlAr~~tgr~~ii~~~~sYHG~-T~g-a~s~tg~~~~~~~~~~p~~~~~~~~p~p~~~~~~~~~~~~d~ 185 (421)
T PRK09792 108 TTGAEAVENAVKIARAHTGRPGVIAFSGGFHGR-TYM-TMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDA 185 (421)
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCC-CHH-HHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHH
T ss_conf 783579999999988752998599981785885-230-354328976433567889997378078842246662336999
Q ss_pred HHHHHHHH-CC---CEEEE----ECCC--CCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCC-CCCCC-CCEEE
Q ss_conf 99999860-46---67897----0552--4353637999988641797899186201244-3200012-32200-23567
Q gi|254780349|r 165 IESLAIEY-NP---KLIIV----GGTA--YSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHP-SPVPH-CHIVT 231 (433)
Q Consensus 165 ~~~~a~~~-kP---klIi~----G~S~--y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~-~Pl~~-ADvvt 231 (433)
++++.+.. .+ .-||+ |..- .+-+-=++++|+|||++|++|++|.-++ |+ =-|..|- +-+.. .|++|
T Consensus 186 ~~~~~~~~~~~~~iAAvi~EPiqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~fa~e~~gv~PDii~ 264 (421)
T PRK09792 186 IERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQS-GFARTGKLFAMDHYADKPDLMT 264 (421)
T ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCEE-CCCCCCCCHHHHHHCCCCCEEE
T ss_conf 999976445667458999656457788230898999999999987396797202210-6863665226575099986876
Q ss_pred ECCCCCCCC--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-
Q ss_conf 404565225--67448983362056501664654322344556668999999997356489999999988899999986-
Q gi|254780349|r 232 TTTHKSLRG--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQ- 308 (433)
Q Consensus 232 ~sTHKtl~G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~- 308 (433)
.+ |.|.| |-++++.. + ++.+.......-++.+|+.+..-||+++ .+.++. .+.++|++.+.+.|.
T Consensus 265 ~g--K~l~gG~P~~av~~~-~-~v~~~~~~~~~~~Tf~Gnpl~~aaa~a~--L~ii~~------e~l~~~v~~~g~~l~~ 332 (421)
T PRK09792 265 MA--KSLAGGMPLSGVVGN-A-NIMDAPAPGGLGGTYAGNPLAVAAAHAV--LNIIDK------ESLCERANQLGQRLKN 332 (421)
T ss_pred EC--CCCCCCCCEEEEEEC-H-HHHCCCCCCCCCCCCCCCHHHHHHHHHH--HHHHHH------CCHHHHHHHHHHHHHH
T ss_conf 43--223488771899972-8-8864678776478799898999999999--999986------5899999999999999
Q ss_pred ---HC--CCCCCCCCCCCCEEE-ECCCCCC---CC---HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf ---16--852334588898126-3166556---76---799999888567188037899899998889851224666730
Q gi|254780349|r 309 ---FL--GFDIVSGGTDNHLML-VDLRSKR---MT---GKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTT 376 (433)
Q Consensus 309 ---~~--G~~vv~ggTd~H~vl-vdl~~~~---~~---G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTt 376 (433)
+. .++.|..=.-.-+++ +++.+.. -+ +....+.+-+.|+++-... | ..+-||+.-|- |
T Consensus 333 ~L~~~~~~~p~v~~VRG~Glm~gvel~d~~~~~p~~~~~~~i~~~~~~~Gll~~~~g-~-------~g~~i~~~PPL-~- 402 (421)
T PRK09792 333 TLIDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCG-A-------YGNVIRFLYPL-T- 402 (421)
T ss_pred HHHHHHHCCCCEEEEEECEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECC-C-------CCCEEEEECCE-E-
T ss_conf 999997569988985414189999975787788329999999999997797899448-9-------98989997992-3-
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q ss_conf 79998999999999999960
Q gi|254780349|r 377 RGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 377 rG~~e~em~~iA~li~~~L~ 396 (433)
..++|++++.++|.++|+
T Consensus 403 --it~~eid~~~~il~~aL~ 420 (421)
T PRK09792 403 --IPDAQFDAAMKILQDALS 420 (421)
T ss_pred --CCHHHHHHHHHHHHHHHC
T ss_conf --889999999999999963
No 271
>PRK06541 hypothetical protein; Provisional
Probab=98.49 E-value=0.00011 Score=53.05 Aligned_cols=214 Identities=20% Similarity=0.262 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHCCC---EEEE------ECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCCC-CCC-CCE
Q ss_conf 89999999860466---7897------05524353637999988641797899186201244-320001232-200-235
Q gi|254780349|r 162 MHEIESLAIEYNPK---LIIV------GGTAYSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPSP-VPH-CHI 229 (433)
Q Consensus 162 ~d~~~~~a~~~kPk---lIi~------G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~P-l~~-ADv 229 (433)
.|++++.+....|. -||+ |+...+-+-=++.+|++|+++|++|++|.-+ .|+ =.|..|-.. +.- .|+
T Consensus 207 ~~~~~~~i~~~~~~~iAavI~EPi~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEVq-tGfGRtG~~fa~e~~gv~PDi 285 (460)
T PRK06541 207 ADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVI-CAFGRLGEMFGCERFGYVPDI 285 (460)
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCE-ECCCCCCCCCHHCCCCCCCCH
T ss_conf 9999999985199857899845777878865686899999999746479537667512-078653373220168948951
Q ss_pred EEECCCCCCC-C--CCCEEEEECCCCHHHHCCHH--HCH--HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q ss_conf 6740456522-5--67448983362056501664--654--322344556668999999997356489999999988899
Q gi|254780349|r 230 VTTTTHKSLR-G--PRGGLIMTNHADLAKKINSA--IFP--GLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQA 302 (433)
Q Consensus 230 vt~sTHKtl~-G--PrgGiI~~~~~e~~~~i~~a--vfP--g~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~ 302 (433)
||.+ |.|. | |=|+++.++ ++.+.+... .|+ .+.+|.-+...||+|+ .+.++.+ ....++.+....
T Consensus 286 v~~g--Kglg~G~~Pl~av~~~~--~i~~~~~~~~~~~~hg~T~~gnpla~aaa~av--L~~i~~~--~l~~~v~~~G~~ 357 (460)
T PRK06541 286 ITCA--KGITSGYSPLGAMIASD--RLVEPFLDGKTMFLHGYTFGGHPVSAAVALAN--LDIFERE--GLLDHVRDNEPA 357 (460)
T ss_pred HHHH--HHCCCCCCCCEEEECCH--HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH--HHHHHHC--CHHHHHHHHHHH
T ss_conf 4122--31258877704674039--99876526885313576788898999999999--9999865--799999999999
Q ss_pred HHHHHHHC-CCCCCCCCCCCCEEE-ECCC-C----CCCCHH--------HHHHHHHHCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf 99998616-852334588898126-3166-5----567679--------9999888567188037899899998889851
Q gi|254780349|r 303 LAKKLQFL-GFDIVSGGTDNHLML-VDLR-S----KRMTGK--------RAESILGRVSITCNKNSIPFDPESPFITSGI 367 (433)
Q Consensus 303 La~~L~~~-G~~vv~ggTd~H~vl-vdl~-~----~~~~G~--------~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGi 367 (433)
|.+.|.+. .+++|..=.-.-+++ |++. + ...++. ...+.|-+.|+++..+.- -++-|
T Consensus 358 l~~~L~~l~~~p~v~dVRG~GL~~giElv~d~~~~~~~~~~~~~~~~~~~l~~~~~~~Gl~~~~~~~--------~~~vi 429 (460)
T PRK06541 358 FRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADDR--------GDPVV 429 (460)
T ss_pred HHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCC--------CCCEE
T ss_conf 9999999746997787410773899995457654566764677899999999999978959974589--------99889
Q ss_pred CCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 22466673079998999999999999960
Q gi|254780349|r 368 RLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 368 RlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
||--|-+ +.++|++++.+.+.++|.
T Consensus 430 rl~PPL~----it~~eid~~l~~l~~aL~ 454 (460)
T PRK06541 430 QLAPPLI----SGQEEFDEIEAILRSVLT 454 (460)
T ss_pred EEECCEE----CCHHHHHHHHHHHHHHHH
T ss_conf 9978933----789999999999999999
No 272
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.49 E-value=0.00018 Score=51.70 Aligned_cols=274 Identities=16% Similarity=0.146 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHH-HCC-CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCC
Q ss_conf 999999999987188630100001679999999983-154-874881233448411147665433333220136-65832
Q gi|254780349|r 80 IENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLAL-MHP-GDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPY-NVRKE 156 (433)
Q Consensus 80 iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~AL-l~p-GD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y-~~d~~ 156 (433)
.+.++.+.+ +..+.+++-. ..||+-||.+++..- .-. ..+|+++.-..=|+.. | ..+.++.......| +.-+.
T Consensus 68 ~~~l~~~l~-~~~~~~~v~f-~~SGseAve~AiklAr~~tgr~~ii~~~~~yHG~t~-g-~ls~~~~~~~~~~~~~~~~~ 143 (364)
T PRK04013 68 KEEMLEELS-KWVNYEYVYM-GNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTM-G-ALSATWKPKYREDFEPLVPG 143 (364)
T ss_pred HHHHHHHHH-HCCCCCEEEE-CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC-C-CCCCCCCCCCCCCCCCCCCC
T ss_conf 999999975-2579788996-388469999999998762799989996488677866-6-33445773334577899887
Q ss_pred CCCC---CHHHHHHHHHHHCCCEEEEEC----CC-CCCCC-CHHHHHHHHHHCCCEEEECCCCHHHHHHHHC-CCC-CCC
Q ss_conf 3565---989999999860466789705----52-43536-3799998864179789918620124432000-123-220
Q gi|254780349|r 157 DGLL---DMHEIESLAIEYNPKLIIVGG----TA-YSRVW-DWERFRSIADSIGAYLMADISHISGLVVGGQ-HPS-PVP 225 (433)
Q Consensus 157 ~~~I---D~d~~~~~a~~~kPklIi~G~----S~-y~~~~-d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~-~~~-Pl~ 225 (433)
...+ |++++++... .+..-||+.. .- .+-+- =++++|++||++|.+|++|.-++ |+ -.|. |-. -+.
T Consensus 144 ~~~~p~~d~~~~~~~~~-~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~t-Gf-RtG~~~a~e~~g 220 (364)
T PRK04013 144 FKHIPFNDVEAAKEAIT-KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQS-GL-RTGKFLAIEHYK 220 (364)
T ss_pred EEECCCCCHHHHHHHHC-CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCC-CC-CCCCCCHHHCCC
T ss_conf 05557643999998726-6735999976777888624877999999999997699767102303-60-434302311589
Q ss_pred C-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q ss_conf 0-23567404565225--67448983362056501664654322344556668999999997356489999999988899
Q gi|254780349|r 226 H-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQA 302 (433)
Q Consensus 226 ~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~ 302 (433)
- .|+||. -|.|.| |=++++... ++.+-. -+..+.|+| ....||+++- +.++. .++++|++.
T Consensus 221 v~PDiv~~--gKglggG~Pl~av~~~~--~i~~~~---h~~T~~Gnp-~~~aaa~a~L--~ii~~------e~l~~~~~~ 284 (364)
T PRK04013 221 VEPDIVTM--GKGIGNGVPVSLTLTNF--DVERGK---HGSTFGGNP-LACKAVAVTL--RILRR------ERLVEKAGE 284 (364)
T ss_pred CCCCEEEE--CCCCCCCCCCEEEEECC--CCCCCC---CCCCCCCCH-HHHHHHHHHH--HHHHH------CHHHHHHHH
T ss_conf 99989996--34000886518999641--011376---567558898-9999999999--99986------639999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCEEE-ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCH
Q ss_conf 99998616852334588898126-31665567679999988856718803789989999888985122466673079998
Q gi|254780349|r 303 LAKKLQFLGFDIVSGGTDNHLML-VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKE 381 (433)
Q Consensus 303 La~~L~~~G~~vv~ggTd~H~vl-vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e 381 (433)
....+....+.-+.| .-+++ ++++. ...+..+.|.+.|+++... ++ .-||+- |.++ +.+
T Consensus 285 ~~~~~~~~~v~~vRG---~GL~~gie~~~---p~~~~~~~~~~~G~l~~~~---g~-------~virl~-PPL~---it~ 344 (364)
T PRK04013 285 KFIEIKGERVVTTRG---RGLMIGIVLKK---PVGKYVEELQNRGYLVHTA---GQ-------RVIRLL-PPLI---ISK 344 (364)
T ss_pred HHHHHCCCCEEEEEC---CCEEEEEEECC---CHHHHHHHHHHCCEEEEEC---CC-------CEEEEE-CCEE---CCH
T ss_conf 999856570089861---53799999778---4899999999599699637---99-------989998-8813---789
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999960
Q gi|254780349|r 382 KDFEYIGELIAQILD 396 (433)
Q Consensus 382 ~em~~iA~li~~~L~ 396 (433)
+|++++.+.|.++|.
T Consensus 345 ~eid~~~~~l~~al~ 359 (364)
T PRK04013 345 DTMEEAKSAIEGVIN 359 (364)
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999999
No 273
>PRK07036 hypothetical protein; Provisional
Probab=98.49 E-value=0.00012 Score=53.01 Aligned_cols=285 Identities=18% Similarity=0.229 Sum_probs=138.0
Q ss_pred HHHHHHHHHHHCCCCCEECC-CHHHHHHHHHHHHHH-------HCCC-CEEEECCCCCCCCCCCCCCCCCCCCCC-----
Q ss_conf 99999999987188630100-001679999999983-------1548-748812334484111476654333332-----
Q gi|254780349|r 81 ENIAIERAKKLFNVNFVNVQ-SHSGSQMNQGVFLAL-------MHPG-DSFMGLSLDSGGHLTHGSSVNMSGKWF----- 146 (433)
Q Consensus 81 E~la~~~a~~lF~a~~anvq-p~SG~~An~av~~AL-------l~pG-D~Il~~~l~~GGHlshg~~~~~~g~~~----- 146 (433)
++||... .+++....--|. ..||+-||.+++.-- -+|+ .+|+++.-..=|. |.+ ..++++.-.
T Consensus 98 ~~lae~L-~~~~p~~~~~v~f~~SGsEA~E~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~-T~~-a~s~sg~~~~~~~~ 174 (466)
T PRK07036 98 AELAAKL-AELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNCRGRPAKKHIITRGDAYHGS-TYL-TASLTGKAADRTEF 174 (466)
T ss_pred HHHHHHH-HHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC-CHH-HHECCCCCCCCCCC
T ss_conf 9999999-97488775879983773889999999999998750888760898348976896-565-62205884456787
Q ss_pred -------CCC--CCCCCC-CC-CCCC-----HHHHHHHHHHHCCC---EEEE----E--CCCCCCCCCHHHHHHHHHHCC
Q ss_conf -------201--366583-23-5659-----89999999860466---7897----0--552435363799998864179
Q gi|254780349|r 147 -------KAI--PYNVRK-ED-GLLD-----MHEIESLAIEYNPK---LIIV----G--GTAYSRVWDWERFRSIADSIG 201 (433)
Q Consensus 147 -------~~~--~y~~d~-~~-~~ID-----~d~~~~~a~~~kPk---lIi~----G--~S~y~~~~d~~~l~eIa~~~g 201 (433)
..+ |++... .+ ...+ .+++++.+.+..|. -||+ | +...+-+-=++++|++||++|
T Consensus 175 ~~~~~~v~~~~~p~~~~~p~~~~~~~~~~~~~~~~e~~i~~~~~~~iAa~i~EPi~G~gG~~~pp~~yl~~lr~lc~~~g 254 (466)
T PRK07036 175 DYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILELGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYD 254 (466)
T ss_pred CCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHHHHCC
T ss_conf 78887504325776555776652367899999999999986188866899856621668713088899999999986379
Q ss_pred CEEEECCCCHHHH-HHHHCCC--CCCCC-CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCCHH-----HCH-H-HHH
Q ss_conf 7899186201244-3200012--32200-23567404565225---67448983362056501664-----654-3-223
Q gi|254780349|r 202 AYLMADISHISGL-VVGGQHP--SPVPH-CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKINSA-----IFP-G-LQG 267 (433)
Q Consensus 202 a~l~~D~aH~~GL-Ia~g~~~--~Pl~~-ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~a-----vfP-g-~qg 267 (433)
++|++|.-++ |+ =.|..|. +-+.- .|+||.+ |.|.| |-|+++.+ + ++.+.+... +|- | +.+
T Consensus 255 illI~DEV~t-G~GRtG~~fa~~~~~gv~PDiv~~g--Kgl~gG~~Pl~av~~~-~-~i~~~~~~~~~~~~~~~hg~T~~ 329 (466)
T PRK07036 255 ILYISDEVVT-GFGRLGHFFASEAVFGIQPDIITVA--KGLTSGYQPLGAVIIS-E-RLVDVISGPNAKGGVFTHGFTYS 329 (466)
T ss_pred EEEEEECCCC-CCCCCCCCHHHHHHHCCCCCEEEEC--CCCCCCCCCEEEEEEC-H-HHHHHHCCCCCCCCEEECCCCCC
T ss_conf 0799745642-8886755204358638898779871--3356887764899985-9-99987504678884550367888
Q ss_pred HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-----CCCCCCCCCCCCEEE-ECC----CCCC---C-
Q ss_conf 4455666899999999735648999999998889999998616-----852334588898126-316----6556---7-
Q gi|254780349|r 268 GPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-----GFDIVSGGTDNHLML-VDL----RSKR---M- 333 (433)
Q Consensus 268 ~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-----G~~vv~ggTd~H~vl-vdl----~~~~---~- 333 (433)
|.-+..-||+|+ .+.++.+ ..++|++.+.+.|.++ .++.|..-.--.+++ |++ ..+. .
T Consensus 330 gnpla~Aaa~a~--L~~l~~e------~l~~~~~~~G~~l~~~L~~L~~~p~v~dVRG~GLm~gie~v~d~~~~~~~~~~ 401 (466)
T PRK07036 330 GHPVACAAALKN--IEIMERE------GLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPED 401 (466)
T ss_pred CCHHHHHHHHHH--HHHHHHC------CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCCCCCCC
T ss_conf 998999999999--9998626------69999999999999999975159977888632389999970266544457711
Q ss_pred --CHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf --679999988856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 334 --TGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 334 --~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
-+..+...+-+.|+++.. . ...+||. |.+| +.++|++++.+.+.++|+
T Consensus 402 ~~~~~~i~~~~~~~Gll~~~----~-------g~~~~l~-PPL~---it~~eid~~l~~l~~al~ 451 (466)
T PRK07036 402 IAIGQRIDRHCQERGLLVRP----L-------EHLCVLS-PPLI---ITRAQIDEIVAILRAAIE 451 (466)
T ss_pred HHHHHHHHHHHHHCCEEEEE----C-------CCEEEEE-CCCC---CCHHHHHHHHHHHHHHHH
T ss_conf 79999999999969949996----6-------9889998-9976---899999999999999999
No 274
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=98.48 E-value=0.00023 Score=50.95 Aligned_cols=193 Identities=16% Similarity=0.134 Sum_probs=100.8
Q ss_pred CCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHH-HHHCCCCC-CCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHC
Q ss_conf 243536379999886417978991862012443-20001232-200-23567404565225--67448983362056501
Q gi|254780349|r 183 AYSRVWDWERFRSIADSIGAYLMADISHISGLV-VGGQHPSP-VPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKI 257 (433)
Q Consensus 183 ~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLI-a~g~~~~P-l~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i 257 (433)
..|-+-=++++|++||++|++|++|.-++ |+= .|..|-.. +.- .|+||.+ |.|.| |-++++.. + ++.+..
T Consensus 238 ~~p~~~yl~~lr~lc~~~gillI~DEV~T-GfGRtG~~fa~e~~gv~PDivt~g--Kgl~gG~Plsav~~~-~-ei~~~~ 312 (446)
T PRK06058 238 IVPAEGFLPALLDWCRENGVVFIADEVQT-GFARTGAMFACEHEGIVPDLITTA--KGIAGGLPLSAVTGR-A-EIMDAP 312 (446)
T ss_pred CCCCHHHHHHHHHHHHHCCCEEECCCCEE-CCCCCCCCHHHHHCCCCCCEEEEC--HHCCCCCCCCCCCCC-H-HHHCCC
T ss_conf 67988999999999987492587043120-677556604565358899854422--101378885100046-9-886067
Q ss_pred CHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCEEE-ECC---CCC
Q ss_conf 66465432234455666899999999735648999999998889999998616--852334588898126-316---655
Q gi|254780349|r 258 NSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL--GFDIVSGGTDNHLML-VDL---RSK 331 (433)
Q Consensus 258 ~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~--G~~vv~ggTd~H~vl-vdl---~~~ 331 (433)
...-.-.+.+|.-+...||++ .+.. ++.+ ...+++-+..+.|.+.|.+. .+++|..----.+++ +++ +..
T Consensus 313 ~~~~~g~T~~Gnpla~aaala-~L~~-i~~e--~l~~~v~~~g~~l~~~L~~l~~~~~~i~dvRG~GLm~gielv~~~~~ 388 (446)
T PRK06058 313 HVGGLGGTYGGNPVACAAALA-AIET-IESD--DLVARARQIERLVTDRLGALQAEDDRIGDVRGRGAMIAIELVKSGTT 388 (446)
T ss_pred CCCCCCCCCCCCHHHHHHHHH-HHHH-HHHC--CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEEECCCC
T ss_conf 678767788989899999999-9999-9865--69999999989999999999860997887764546999999308888
Q ss_pred CC---CHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 67---679999988856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 332 RM---TGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 332 ~~---~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
.- ...++...+-+.|+++-... ..+.-||+.-|-. ..++|+.++-+++.++|+
T Consensus 389 ~~~~~~~~~v~~~~~~~Gll~~~~g--------~~g~~lrl~PPL~----it~~eid~~l~il~~al~ 444 (446)
T PRK06058 389 EPDAELTKALAAAAHAAGVIVLTCG--------TYGNVIRLLPPLV----ISDELLSEGLDVLEAALA 444 (446)
T ss_pred CCCHHHHHHHHHHHHHCCCEEECCC--------CCCCEEEEECCEE----CCHHHHHHHHHHHHHHHH
T ss_conf 9598999999999997898896258--------8999899979945----789999999999999997
No 275
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.47 E-value=0.00023 Score=50.89 Aligned_cols=209 Identities=14% Similarity=0.150 Sum_probs=107.5
Q ss_pred CHHHHHHHHHHHCC--CEEEEEC----C--C-CCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCC-CCCC-CC
Q ss_conf 98999999986046--6789705----5--2-4353637999988641797899186201244-32000123-2200-23
Q gi|254780349|r 161 DMHEIESLAIEYNP--KLIIVGG----T--A-YSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPS-PVPH-CH 228 (433)
Q Consensus 161 D~d~~~~~a~~~kP--klIi~G~----S--~-y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~-Pl~~-AD 228 (433)
+.+++++++++... .-||+.. + . .+-+-=++++|+||+++|++|++|.-.+ |+ =.|..|-. -+.- .|
T Consensus 206 ~~~~le~~~~~~~~~iAAvivEP~iqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~t-GfGRTG~~fa~e~~gv~PD 284 (452)
T PRK06943 206 ALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYVRGLRALCDEYGVHLIADEIAV-GCGRTGTFFACEQAGVWPD 284 (452)
T ss_pred HHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHCCCEEEECCCCC-CCCCCCCCCCCCCCCCCCE
T ss_conf 999999999856997789999575146796185889999999999864496487133202-8864517710234699882
Q ss_pred EEEECCCCCCCC---CCCEEEEECCCCHHHHCCHHH----CH--HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 567404565225---674489833620565016646----54--322344556668999999997356489999999988
Q gi|254780349|r 229 IVTTTTHKSLRG---PRGGLIMTNHADLAKKINSAI----FP--GLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLN 299 (433)
Q Consensus 229 vvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~av----fP--g~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~N 299 (433)
++|.+ |.|.| |=|++ ++++ ++.+.+...- |. .+.+|..+..-||+++ + +.++. ..+++|
T Consensus 285 iit~g--Kgl~gG~~Plsav-~~~~-ei~~~~~~~~~~~~~~h~~T~~GnplacAaala~-L-~~l~~------e~l~~~ 352 (452)
T PRK06943 285 FLCLS--KGISGGYLPLSLV-LSRD-EIFDAFYDDDTTRGFLHSHSYTGNPLACRAAVAT-L-DLFAR------DDVLAR 352 (452)
T ss_pred EEEEC--CHHHCCCCCCCEE-EECH-HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH-H-HHHHH------CCHHHH
T ss_conf 99976--5212898653124-3038-8998643799767867577889888999999999-9-99986------579999
Q ss_pred HHHHHHHHHH----C-CCCCCCCCCCCCEE-EECCCCCCCCHH----HHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 8999999861----6-85233458889812-631665567679----999988856718803789989999888985122
Q gi|254780349|r 300 SQALAKKLQF----L-GFDIVSGGTDNHLM-LVDLRSKRMTGK----RAESILGRVSITCNKNSIPFDPESPFITSGIRL 369 (433)
Q Consensus 300 A~~La~~L~~----~-G~~vv~ggTd~H~v-lvdl~~~~~~G~----~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRl 369 (433)
++.+.+.|.+ . ..+.|..-----++ -|++...+-... .....+-+.|+++... .+.|||
T Consensus 353 ~~~~g~~l~~~L~~l~~~~~V~dVRG~GL~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~-----------g~~i~l 421 (452)
T PRK06943 353 NARKSALLRAALAPLAAHPQVRHLRQRGTIFAFDVALDGDAARTFSRRFFEHALERELLLRPI-----------GTTVYL 421 (452)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEC-----------CCEEEE
T ss_conf 999999999999987359988886307589999966787645799999999999699289864-----------999999
Q ss_pred CCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 4666730799989999999999999602
Q gi|254780349|r 370 GTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 370 GT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
. |++| +.++|++++.+.+.++|+.
T Consensus 422 ~-PPL~---it~~eid~~~~~L~~aL~~ 445 (452)
T PRK06943 422 M-PPYV---LDDEEIAWLAQRTRATLDA 445 (452)
T ss_pred E-CCCC---CCHHHHHHHHHHHHHHHHH
T ss_conf 7-9903---8899999999999999999
No 276
>TIGR02617 tnaA_trp_ase tryptophanase; InterPro: IPR013440 Proteins in this entry belong to the beta-eliminating lyase family and are thought to act as tryptophanases (4.1.99.1 from EC) (also known as L-tryptophan indole-lyases). The genes encoding these proteins are, as a rule, found with a tryptophanase leader peptide TnaC (IPR013439 from INTERPRO) encoded upstream. ; GO: 0009034 tryptophanase activity, 0006568 tryptophan metabolic process.
Probab=98.47 E-value=3.3e-06 Score=63.73 Aligned_cols=334 Identities=18% Similarity=0.300 Sum_probs=214.9
Q ss_pred HHHHHHHCCC--CCCCCCC---------CCHHHHHHHHCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9999983888--1043010---------2989999830510288657988875-33600679999999999999871886
Q gi|254780349|r 28 ESCRQNDEIQ--LIASENI---------VSRAVLEAQGSILTNKYAEGYPSKR-YYGGCQYVDDIENIAIERAKKLFNVN 95 (433)
Q Consensus 28 e~~rq~~~l~--LiASEN~---------~S~~v~~~l~S~l~nkyaeG~pg~r-yy~G~~~~d~iE~la~~~a~~lF~a~ 95 (433)
|..-.+.+.| |.+||.+ +-.......+..|.+ -|-|.|.| ||.= .+..+++||-+
T Consensus 24 E~A~~~aG~NPFLL~S~~VfIDLLTDSGTGA~~~~~~Aa~~~G--DEAY~GSR~Yy~L-----------a~~V~~~~GY~ 90 (468)
T TIGR02617 24 EKAILEAGMNPFLLDSEDVFIDLLTDSGTGAVTQRMQAAMMRG--DEAYSGSRSYYAL-----------ADKVKEIFGYQ 90 (468)
T ss_pred HHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCC--CCCCCCCHHHHHH-----------HHHHHHHCCCC
T ss_conf 9999957898753770011343112688531054667764236--4102132358999-----------99976642731
Q ss_pred CEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCC-----------------------C-CCCC
Q ss_conf 301000016799999999831548748812334484111476654333332-----------------------2-0136
Q gi|254780349|r 96 FVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWF-----------------------K-AIPY 151 (433)
Q Consensus 96 ~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~-----------------------~-~~~y 151 (433)
|.-. .|-|--|-+.-+=.|++.... ++| ++|.+.+.+|-.+| + .+.|
T Consensus 91 YTIP-THQGRGAEQI~~P~LI~~~~~-------~~G-~~~~kmV~~SNyfFDTT~~H~~~Ng~~a~NV~~~~AFDT~~~~ 161 (468)
T TIGR02617 91 YTIP-THQGRGAEQIYIPVLIKKREA-------EKG-LDRSKMVALSNYFFDTTQGHVQINGCKAKNVYTSEAFDTGVKY 161 (468)
T ss_pred CCCC-CCCCCCHHHHHHHHHHHHHHH-------HCC-CCCCCEEEEECCCCHHHHHHHHHCCCEEEEEEEECCCCCCEEC
T ss_conf 1368-757886044566578887766-------258-9855278873232011134443135237887752022343201
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCC---EEE---EECCCCCCCC---CHHHHHHHHHHCCCEEEECCCCHHHH---HHH--
Q ss_conf 658323565989999999860466---789---7055243536---37999988641797899186201244---320--
Q gi|254780349|r 152 NVRKEDGLLDMHEIESLAIEYNPK---LII---VGGTAYSRVW---DWERFRSIADSIGAYLMADISHISGL---VVG-- 217 (433)
Q Consensus 152 ~~d~~~~~ID~d~~~~~a~~~kPk---lIi---~G~S~y~~~~---d~~~l~eIa~~~ga~l~~D~aH~~GL---Ia~-- 217 (433)
++ .|..|+|+||+.+.++-|. .|| -.-|+-..|+ ++|.+-+||+++..-++.|.|-++-- |--
T Consensus 162 Df---KG~FDl~~LE~~I~E~G~~NV~~Iv~TiTcNSaGGQPvSlANlKAvY~IAk~yDIPVv~DSARFaENAyFIkQRE 238 (468)
T TIGR02617 162 DF---KGNFDLEELEKTIAEAGPDNVPYIVTTITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQRE 238 (468)
T ss_pred CC---CCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHH
T ss_conf 33---567577888788750285663277775431689684267888899999986459986862302233457777533
Q ss_pred HCC---------CCCCCCCCEEEECCCCCCCCCCCEEEEECCC---CHHHHCCHHH-----CHHHHHHHHHHHHHHHHHH
Q ss_conf 001---------2322002356740456522567448983362---0565016646-----5432234455666899999
Q gi|254780349|r 218 GQH---------PSPVPHCHIVTTTTHKSLRGPRGGLIMTNHA---DLAKKINSAI-----FPGLQGGPFMHSIAAKAVA 280 (433)
Q Consensus 218 g~~---------~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~---e~~~~i~~av-----fPg~qg~~~~~~iaa~ava 280 (433)
.-| .--.+|||-++.|--|-=-=+=||+++.+|+ |++..+..-+ ||.+ ||..=..+-+|||.
T Consensus 239 ~~Y~~~si~~I~~E~Y~YaD~L~MSAKKD~~V~~GGL~C~~Ddsf~D~y~E~RT~CV~~EGF~TY-GGL~G~~ME~LAvG 317 (468)
T TIGR02617 239 KEYENWSIEQITREMYKYADMLAMSAKKDALVNMGGLLCFKDDSFFDVYTEVRTLCVVQEGFPTY-GGLEGGAMERLAVG 317 (468)
T ss_pred HHHCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEECCCCHHHHHHCCCCEEECCCCCCCC-CCCCCHHHHHHHHH
T ss_conf 00003318898888654202011010125400047625520352245533312223214675555-77760457888751
Q ss_pred HHHHHCHHHHHHH-HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC--CCCHHHH-H-----HHHHHCCEEE-E
Q ss_conf 9997356489999-99998889999998616852334588898126316655--6767999-9-----9888567188-0
Q gi|254780349|r 281 FGEALSSEFRDYA-KQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSK--RMTGKRA-E-----SILGRVSITC-N 350 (433)
Q Consensus 281 l~Ea~~~~f~~Ya-~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~--~~~G~~a-~-----~~Le~~gI~~-N 350 (433)
|.|=+..+|-+|- .|| +.|...|.+-|+.+-. -|=-|-+.||-... .+-+.++ + +.-..|||.. -
T Consensus 318 L~~GM~~~~LAYRI~QV----~YL~~~L~~~Gv~~Q~-P~GGHA~FVDA~~LLPHIPa~QFPA~AL~~ELY~~AGIRaVE 392 (468)
T TIGR02617 318 LYDGMNEDYLAYRINQV----AYLVNGLEDIGVVIQQ-PAGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVE 392 (468)
T ss_pred HHHHCCCCHHHHHHHHH----HHHHHHHHHCCCEEEC-CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEE
T ss_conf 45300343277889999----9998557667805764-998637676311027888865554888855567761711453
Q ss_pred C--CCCCCCCCCC-CCCC---CCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 3--7899899998-8898---512246667307999899999999999996
Q gi|254780349|r 351 K--NSIPFDPESP-FITS---GIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 351 k--n~iP~D~~~~-~~~s---GiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
- =.+=-||+.. ..|| =|||-- -|+-+..++|+-|-+-+..+-
T Consensus 393 IGSlLLGRDP~TGKQ~P~P~ELLRLTI---PR~~YT~~HMDfiiEAF~~~K 440 (468)
T TIGR02617 393 IGSLLLGRDPKTGKQKPCPAELLRLTI---PRATYTQTHMDFIIEAFKSVK 440 (468)
T ss_pred ECHHHHCCCCCCCCCCCCHHHHHHHCC---CCHHHHCCHHHHHHHHHHHHH
T ss_conf 101421678878788887067764026---620110112478999999998
No 277
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=98.46 E-value=0.00013 Score=52.77 Aligned_cols=192 Identities=16% Similarity=0.172 Sum_probs=102.3
Q ss_pred CCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCCC-CCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCH
Q ss_conf 353637999988641797899186201244-320001232-200-23567404565225--6744898336205650166
Q gi|254780349|r 185 SRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPSP-VPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINS 259 (433)
Q Consensus 185 ~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~P-l~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~ 259 (433)
|-+-=++++|++|++.|++|++|.-++ |+ =.|..|... +.. .|+||.+ |.|.| |=++++.. + ++.+..+.
T Consensus 238 p~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~fa~e~~gv~PDiv~~g--K~lg~G~Plsav~~~-~-~i~~~~~~ 312 (454)
T PRK06918 238 PSKKFVQEVRNICSEHGILFVADEIQT-GFSRTGKYFAIDHYDVVPDLITVS--KSLGAGVPISGVIGR-K-EIMNEAAP 312 (454)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECCC-CCCCCCCCCHHHCCCCCCEEEEEC--CHHHCCCCCCCEEEC-H-HHHHCCCC
T ss_conf 898999999998856491687201124-876135740222279898599977--265589987226521-8-87604688
Q ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCEE-EECCC---C---
Q ss_conf 465432234455666899999999735648999999998889999998616--85233458889812-63166---5---
Q gi|254780349|r 260 AIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL--GFDIVSGGTDNHLM-LVDLR---S--- 330 (433)
Q Consensus 260 avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~--G~~vv~ggTd~H~v-lvdl~---~--- 330 (433)
..+-++.+|.-+...||+++- +.++.+ .+..++.+..+.|.+.|.+. -++++..-.---++ -+++- .
T Consensus 313 ~~~~~Tf~gnpla~aaa~a~L--~~i~~e--~l~~~~~~~G~~l~~~L~~l~~~~p~v~~vRG~Gl~~gvelv~d~~~~~ 388 (454)
T PRK06918 313 GELGGTYAGSPLGCAAALAVL--DIIEKE--NLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKE 388 (454)
T ss_pred CCCCCCCCCCHHHHHHHHHHH--HHHHHC--CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCCC
T ss_conf 671561798989999999999--999866--8999999999999999999986299868882264799999950676689
Q ss_pred --CCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf --56767999998885671880378998999988898512246667307999899999999999996025
Q gi|254780349|r 331 --KRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDGS 398 (433)
Q Consensus 331 --~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~~ 398 (433)
..+ ..++...|-+.|+++.....-+ .-|||--| ++ ..++|++++-+++.++|+..
T Consensus 389 p~~~~-~~~i~~~~~~~Gll~~~~g~~~--------~vlr~~PP-L~---it~~eid~~l~~l~~al~a~ 445 (454)
T PRK06918 389 PDKTL-TANLCAEANKRGLLLLSAGTYG--------NVIRVLMP-LV---ITDEQLEEGLTIIEESLQAC 445 (454)
T ss_pred CCHHH-HHHHHHHHHHCCCEEEECCCCC--------CEEEEECC-CC---CCHHHHHHHHHHHHHHHHHH
T ss_conf 77999-9999999996895998468899--------98999788-22---89999999999999999999
No 278
>PRK07894 consensus
Probab=98.46 E-value=0.00025 Score=50.67 Aligned_cols=269 Identities=16% Similarity=0.132 Sum_probs=136.7
Q ss_pred HHHHHHHHHHHHHH-------HCCCC-EEEECCCCCCCCCCCCCCCCC-----------CCCCCCCCCCCCCCCCC-CCC
Q ss_conf 01679999999983-------15487-488123344841114766543-----------33332201366583235-659
Q gi|254780349|r 102 HSGSQMNQGVFLAL-------MHPGD-SFMGLSLDSGGHLTHGSSVNM-----------SGKWFKAIPYNVRKEDG-LLD 161 (433)
Q Consensus 102 ~SG~~An~av~~AL-------l~pGD-~Il~~~l~~GGHlshg~~~~~-----------~g~~~~~~~y~~d~~~~-~ID 161 (433)
-|||-||.+++.-- -+||- +|+++.-..=|. |.| ..++ .+........+.-+... .-.
T Consensus 118 ~sGSeAvE~AiKlAr~y~~~~g~~~r~~ii~~~~sYHG~-T~g-a~s~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 195 (430)
T PRK07894 118 DSGSVSVEVAVKMALQYWRSRGRPGKHRLMTWRGGYHGD-TFT-PMSVCDPDGGMHSLWTDVLARQVFAPQVPRDYDPAY 195 (430)
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-CCE-EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 781889999999999999971887750799971740477-711-477533877766666788877666899974326788
Q ss_pred HHHHHHHHHHHCCCE--EEEE-------CCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCC-CCCC-CCE
Q ss_conf 899999998604667--8970-------5524353637999988641797899186201244-32000123-2200-235
Q gi|254780349|r 162 MHEIESLAIEYNPKL--IIVG-------GTAYSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPS-PVPH-CHI 229 (433)
Q Consensus 162 ~d~~~~~a~~~kPkl--Ii~G-------~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~-Pl~~-ADv 229 (433)
.+.+++++.++.+++ ||+. +...+-+-=++++|++|+++|.+|++|.=.+ |+ =.|..|-. -+.- .|+
T Consensus 196 ~~~l~~~l~~~~~~iAaii~EP~iqg~GG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfGRTG~~fa~e~~gv~PDi 274 (430)
T PRK07894 196 SAAFEAQLAQHADELAAVIVEPVVQGAGGMRFHDPRYLRDLRDICDRHDVLLIFDEIAT-GFGRTGALFAADHAGVSPDI 274 (430)
T ss_pred HHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCC-CCCCCCCCCHHHCCCCCCEE
T ss_conf 99999999846998669999787438898102899999999998751276265021311-78735676354318988639
Q ss_pred EEECCCCCCCC---CCCEEEEECCCCHHHHCCHHH---C-HH-HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 67404565225---674489833620565016646---5-43-2234455666899999999735648999999998889
Q gi|254780349|r 230 VTTTTHKSLRG---PRGGLIMTNHADLAKKINSAI---F-PG-LQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQ 301 (433)
Q Consensus 230 vt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~av---f-Pg-~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~ 301 (433)
+|.+ |.|.| |=|+++.++ ++++.++..- | -| +.+|+-+.+-||+|+- +.++.+ ....++-+..+
T Consensus 275 i~~a--Kgl~gGy~Pl~avl~~~--~i~~~~~~~~~~~~~Hg~Ty~GnplacAaala~L--~~i~~e--~l~~~~~~~g~ 346 (430)
T PRK07894 275 MCVG--KALTGGYLTLAATLCTA--DVAHTISAGEAGALMHGPTFMANPLACAVSVASV--ELLLGQ--DWRTRVAEIEA 346 (430)
T ss_pred EEEC--CHHHCCCCCCEEEEEHH--HHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHH--HHHHHC--CHHHHHHHHHH
T ss_conf 9977--35448997620122429--8997456788886123789888989999999999--999856--79999999999
Q ss_pred HHHHHHHHC-CCCCCCCCCCC-CEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCC
Q ss_conf 999998616-85233458889-8126316655676799999888567188037899899998889851224666730799
Q gi|254780349|r 302 ALAKKLQFL-GFDIVSGGTDN-HLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGF 379 (433)
Q Consensus 302 ~La~~L~~~-G~~vv~ggTd~-H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~ 379 (433)
.|.+.|.+. .++.|..---- =+..|++.. ..+...+...+-+.|+++. |. .+-||+- |.++ +
T Consensus 347 ~l~~~L~~l~~~p~V~dVRg~Gl~~~vel~~-~~~~~~~~~~a~~~Gvl~r----~~-------~n~i~l~-PPL~---i 410 (430)
T PRK07894 347 GLTAGLAPARALPGVTDVRVLGAIGVIELDR-PVDLAVATPAALDHGVWLR----PF-------RNLVYAM-PPYI---C 410 (430)
T ss_pred HHHHHHHHHCCCCCEEEECCCCEEEEEEECC-CCCHHHHHHHHHHCCCEEE----EC-------CCEEEEE-CCCC---C
T ss_conf 9999999745799769894668099999678-4568999999997993898----54-------9999997-9946---8
Q ss_pred CHHHHHHHHHHHHHHHHC
Q ss_conf 989999999999999602
Q gi|254780349|r 380 KEKDFEYIGELIAQILDG 397 (433)
Q Consensus 380 ~e~em~~iA~li~~~L~~ 397 (433)
.++|++++.+.|.++|+.
T Consensus 411 t~~eid~~~~~l~eal~~ 428 (430)
T PRK07894 411 TPAEIAQITSAMVEVARA 428 (430)
T ss_pred CHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999996
No 279
>PRK06105 aminotransferase; Provisional
Probab=98.45 E-value=0.00027 Score=50.44 Aligned_cols=211 Identities=17% Similarity=0.219 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHCCC---EEEE----ECC--CCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCCC-CCC-CCE
Q ss_conf 89999999860466---7897----055--24353637999988641797899186201244-320001232-200-235
Q gi|254780349|r 162 MHEIESLAIEYNPK---LIIV----GGT--AYSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPSP-VPH-CHI 229 (433)
Q Consensus 162 ~d~~~~~a~~~kPk---lIi~----G~S--~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~P-l~~-ADv 229 (433)
.+++++++.+..|. -||+ |.. ..+-+-=++++|++||++|++|++|.=++ |+ =.|..|-.. +.- .|+
T Consensus 204 ~~~le~~i~~~~~~~iAavIvEPiqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~fa~e~~gv~PDi 282 (460)
T PRK06105 204 ANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVIC-GFGRTGNMFGCETFGIKPDI 282 (460)
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCC-CCCCCCCCCEEECCCCCCCE
T ss_conf 99999999851988567998367248888726986898999999985697799335411-78733376122058737874
Q ss_pred EEECCCCCCCC---CCCEEEEECCCCHHHHCCHH-----HCH--HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 67404565225---67448983362056501664-----654--322344556668999999997356489999999988
Q gi|254780349|r 230 VTTTTHKSLRG---PRGGLIMTNHADLAKKINSA-----IFP--GLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLN 299 (433)
Q Consensus 230 vt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~a-----vfP--g~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~N 299 (433)
||.+ |.|.| |-|+++.+ + ++.+.+... .|. .+.+|.-+...||+++ |.. ++. ....+++-+.
T Consensus 283 v~~g--KglggG~~Pl~av~~~-~-~i~~~~~~~~~~~~~~~hg~T~~gnpla~Aaala~-L~~-i~~--~~l~~~~~~~ 354 (460)
T PRK06105 283 LVLS--KQLTSSYQPLSAVLIN-E-RVYDPIADESGKIGTFGHGFTASGHPVAAAVALEN-LAI-IEE--RDLVGNAAEL 354 (460)
T ss_pred EEEE--CCCCCCCCCEEEEEEC-H-HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHH-HHH--CCHHHHHHHH
T ss_conf 5661--1235787750488423-8-89876503666666653256899998999999999-999-986--4899999999
Q ss_pred HHHHHHHHHHC-CCCCCCCCCCCCEEE-ECC---C--C--CCC---CHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf 89999998616-852334588898126-316---6--5--567---6799999888567188037899899998889851
Q gi|254780349|r 300 SQALAKKLQFL-GFDIVSGGTDNHLML-VDL---R--S--KRM---TGKRAESILGRVSITCNKNSIPFDPESPFITSGI 367 (433)
Q Consensus 300 A~~La~~L~~~-G~~vv~ggTd~H~vl-vdl---~--~--~~~---~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGi 367 (433)
.+.|.+.|.+. .+++++.-.-.-+++ |++ + . ... -+..+.+.+.+.|+++... .+-|
T Consensus 355 g~~l~~~L~~l~~~p~i~~VRG~Gl~~gielv~~~~~~~~~~~~~~~~~~v~~~~~~~Gll~~~~-----------gn~i 423 (460)
T PRK06105 355 GARFQDRLRALADHPLVGEVRGVGLIAAVELVADKATKTPFDPPGAVGARANARAHEHGVISRAM-----------GDTL 423 (460)
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEC-----------CCEE
T ss_conf 99999999986269976888516739999985165445567720799999999999789689306-----------9989
Q ss_pred CCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 22466673079998999999999999960
Q gi|254780349|r 368 RLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 368 RlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
||- |.+| +.++|++++.+.+.++|+
T Consensus 424 ~i~-PPL~---it~~eid~~~~~l~~aL~ 448 (460)
T PRK06105 424 AFC-PPLI---ITAAQVDEMVDRFGRALD 448 (460)
T ss_pred EEE-CCCC---CCHHHHHHHHHHHHHHHH
T ss_conf 997-9924---889999999999999999
No 280
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=98.44 E-value=0.00027 Score=50.39 Aligned_cols=189 Identities=14% Similarity=0.178 Sum_probs=95.0
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCC-CCCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCC
Q ss_conf 4353637999988641797899186201244-32000123-2200-23567404565225--674489833620565016
Q gi|254780349|r 184 YSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPS-PVPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKIN 258 (433)
Q Consensus 184 y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~-Pl~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~ 258 (433)
.+-+-=++++|++|+++|+++++|.-++ |+ =-|..|-. -+.- .|++|.+ |.|.| |-+|+ ++++ ++.+...
T Consensus 239 ~~~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~fa~e~~gv~PDii~~g--Kgl~~G~plsav-~~~~-~i~~~~~ 313 (457)
T PRK05639 239 VPPENFFKELKKLLNELGILLVMDEVQT-GIGRTGKWFASEWFSVKPDMIIFG--KGVASGMGLSGV-IGRK-EIMDITS 313 (457)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEECCCC-CCCCCCCHHHHHCCCCCCCEEEEC--CHHCCCCCCEEE-EECH-HHHHHHC
T ss_conf 2898998899999976398687310322-776256545664379999999977--221079870799-9848-8775405
Q ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH----HHC--CCCCCCCCCCCCEEE-ECCCCC
Q ss_conf 6465432234455666899999999735648999999998889999998----616--852334588898126-316655
Q gi|254780349|r 259 SAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKL----QFL--GFDIVSGGTDNHLML-VDLRSK 331 (433)
Q Consensus 259 ~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L----~~~--G~~vv~ggTd~H~vl-vdl~~~ 331 (433)
..-+-.+.||| +..-||+++ .+.++. .++++|++.+.+.| .+. -+++|..-----+++ +++.+.
T Consensus 314 g~~~~T~~gnp-la~Aaa~a~--L~~i~~------~~l~~~a~~~g~~l~~~L~~L~~~~~~v~dVRG~GL~~giel~~~ 384 (457)
T PRK05639 314 GSALLTPAANP-VISAAAEAT--LEIIEE------ENLLKNALEVGNFIMKRLEEMKEVFEIIGDVRGKGLMIGVEIVKE 384 (457)
T ss_pred CCCCCCCCCCH-HHHHHHHHH--HHHHHH------CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECC
T ss_conf 76555788652-999999999--999996------559999999999999999998863897565503780999999437
Q ss_pred --CCC---HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf --676---7999998885671880378998999988898512246667307999899999999999996025
Q gi|254780349|r 332 --RMT---GKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDGS 398 (433)
Q Consensus 332 --~~~---G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~~ 398 (433)
.-+ ..++..++-+.|+++...... .+-|||- |.+| ..++|++++.+++.++|+..
T Consensus 385 ~~~~~~~~~~~v~~~~~~~Gll~~~~g~~--------~nvirl~-PPL~---it~~eid~~~~il~~al~ea 444 (457)
T PRK05639 385 NGRPDPEMTGKICWRAFELGLILPSYGMF--------GNVIRIT-PPLV---LTKEVAEKGLEIIERAIKDA 444 (457)
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEECCCCC--------CCEEEEE-CCEE---CCHHHHHHHHHHHHHHHHHH
T ss_conf 89989999999999999679688158999--------9989997-8931---68999999999999999999
No 281
>TIGR00474 selA L-seryl-tRNA selenium transferase; InterPro: IPR004534 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homolog of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N-terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pyloriputative SelA.; GO: 0004125 L-seryl-tRNASec selenium transferase activity, 0001514 selenocysteine incorporation, 0005737 cytoplasm.
Probab=98.44 E-value=3.5e-05 Score=56.58 Aligned_cols=347 Identities=19% Similarity=0.208 Sum_probs=206.8
Q ss_pred HHHHHHHHHHHHH-HHCCCCC-------CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999-8388810-------4301029899998305102886579888753360-06799999999999998
Q gi|254780349|r 20 DVFSLIGQESCRQ-NDEIQLI-------ASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGG-CQYVDDIENIAIERAKK 90 (433)
Q Consensus 20 ei~~~i~~e~~rq-~~~l~Li-------ASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G-~~~~d~iE~la~~~a~~ 90 (433)
+|-..+.+|.+-| +..+|+- =.--+.|..|.++.++.+...-+.-|.-+- +| ......|+ +..|+
T Consensus 46 ~i~~~L~~~~Q~~ik~Vin~tG~vLnTnlGra~~ae~v~~a~~~~~~~~v~LEY~L~~--~gRG~R~~~i~----~lLc~ 119 (448)
T TIGR00474 46 EIKSFLKKEAQVAIKRVINLTGTVLNTNLGRALFAEAVNEAISEAMRKYVNLEYDLDE--GGRGHRDAHIE----KLLCK 119 (448)
T ss_pred EEECEECHHHHHHHHHHHCCCCCEEEHHHCCHHHHHHHHHHHHHHHCCCCCCCEECCC--CCCCHHHHHHH----HHHHH
T ss_conf 0103415145688865421267365300144367999999999986257753110211--57531789999----99875
Q ss_pred HCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 7188630100001679999999983154874881233--44841114766543333322013665832356598999999
Q gi|254780349|r 91 LFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSL--DSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESL 168 (433)
Q Consensus 91 lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l--~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~ 168 (433)
|=|++-+=| ...=+.|-+-++.++++|..-|++... .+||-. ..+-.+.-.++.....|.--.+..=||...-.
T Consensus 120 lTgae~~cv-vnNna~avlL~l~~~a~GKeVi~srGEL~eiGg~f--Ripdim~~~g~~l~eVGttn~t~~~Dy~~ai~- 195 (448)
T TIGR00474 120 LTGAEDACV-VNNNAAAVLLMLATLAKGKEVIISRGELVEIGGAF--RIPDIMKQAGCELDEVGTTNRTHVKDYRVAIT- 195 (448)
T ss_pred HCCCCCCEE-EECHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC--CCHHHHHHCCCEEEECCCHHHHHHHHHHHHHH-
T ss_conf 328623304-42338999999999607987999788657898756--54488965385651011012000446777653-
Q ss_pred HHHHCCCEEEEECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHH-HHHHHCC----CCC-----CCC-CCEEEE
Q ss_conf 98604667897055243-----5363799998864179789918620124-4320001----232-----200-235674
Q gi|254780349|r 169 AIEYNPKLIIVGGTAYS-----RVWDWERFRSIADSIGAYLMADISHISG-LVVGGQH----PSP-----VPH-CHIVTT 232 (433)
Q Consensus 169 a~~~kPklIi~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~G-LIa~g~~----~~P-----l~~-ADvvt~ 232 (433)
+..--|-.+-.|.|. ..++-+++.++-++.++.+++|.+ +| ||-=..| ..| +.. +|.|.+
T Consensus 196 --~nTa~Lmkvh~sNf~~~gft~~~~eeeLv~LG~~~~~pv~~D~g--SG~LvdL~~~gL~~~eP~~~~~i~~G~dLVs~ 271 (448)
T TIGR00474 196 --ENTALLMKVHLSNFKIVGFTAKVKEEELVKLGKELDVPVVTDLG--SGLLVDLSQYGLPKNEPNVQEAIALGVDLVSF 271 (448)
T ss_pred --HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCEEEEECC--CCCHHHHHHCCCCCCCCCCCHHHHCCCCEEEC
T ss_conf --10344444430166256521115778999732233770799877--66212254416666889710688669857861
Q ss_pred CCCCCCCCCCCEEEEECCCCHHHHCCHH-HCHHHHHHHHHHHHHHHHHHHHHHHCHH-----------HHHHHHHHHHHH
Q ss_conf 0456522567448983362056501664-6543223445566689999999973564-----------899999999888
Q gi|254780349|r 233 TTHKSLRGPRGGLIMTNHADLAKKINSA-IFPGLQGGPFMHSIAAKAVAFGEALSSE-----------FRDYAKQIVLNS 300 (433)
Q Consensus 233 sTHKtl~GPrgGiI~~~~~e~~~~i~~a-vfPg~qg~~~~~~iaa~aval~Ea~~~~-----------f~~Ya~qvv~NA 300 (433)
||-|-|.|||+|||..++ |+-+||... +=-++- .+.-..||+=.+|+--+.|| |..=.++...+|
T Consensus 272 SgDKLLgGpqaGiivGKK-eli~ki~~~p~kr~Lr--~dk~~LAGle~tLkly~~PEkl~E~ip~lr~ltr~~~~~~~~a 348 (448)
T TIGR00474 272 SGDKLLGGPQAGIIVGKK-ELIEKIQIHPLKRALR--ADKLTLAGLEATLKLYLNPEKLLEKIPTLRLLTRAKKFLRIKA 348 (448)
T ss_pred CCCCCCCCCCCCEEECCH-HHHHHHHHCCCCEEHH--CCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHCCHHHHHHHHH
T ss_conf 651004676503462307-8999985478622101--2416799999999741580243044215565303488999999
Q ss_pred HHHHHHHHHC-C--CCC--CC-----C-CC----CCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCC
Q ss_conf 9999998616-8--523--34-----5-88----8981263166556767999998885671880378998999988898
Q gi|254780349|r 301 QALAKKLQFL-G--FDI--VS-----G-GT----DNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITS 365 (433)
Q Consensus 301 ~~La~~L~~~-G--~~v--v~-----g-gT----d~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~s 365 (433)
+.|.+.|.+. | |+| +. | |. .---+-|..+.....|...+..+.+-+++.- +|- -.|.
T Consensus 349 ~rL~~~L~~~~~~~f~i~i~~~~~~~G~gs~p~~~~pt~~v~~~~~~~~G~~l~~L~~r~~~~~~--pv~------GrPG 420 (448)
T TIGR00474 349 ERLEKELKAIDGAEFNIQIVKERAQIGSGSLPVERLPTIAVTILIEIGSGAKLENLSARYRILTI--PVI------GRPG 420 (448)
T ss_pred HHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCC--CEE------ECCC
T ss_conf 99888750356882268886205788974365322663231111110675127999986185677--744------0777
Q ss_pred CCCCCCHHHHHCCCCHHHHHHHHHHH
Q ss_conf 51224666730799989999999999
Q gi|254780349|r 366 GIRLGTPSGTTRGFKEKDFEYIGELI 391 (433)
Q Consensus 366 GiRlGT~aiTtrG~~e~em~~iA~li 391 (433)
.+|=|--++|.|-....|...|-+.|
T Consensus 421 a~~~~rl~Ld~R~~~~~D~~~i~~~l 446 (448)
T TIGR00474 421 AIKSGRLWLDLRDLERIDDNTILKTL 446 (448)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 76124211325678888799999983
No 282
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=98.41 E-value=0.00032 Score=49.91 Aligned_cols=207 Identities=20% Similarity=0.236 Sum_probs=108.4
Q ss_pred HHHHHHHHHHCCC---EEEEE----CC-CCCCCC-CHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCC-CCCC-CCEE
Q ss_conf 9999999860466---78970----55-243536-37999988641797899186201244-32000123-2200-2356
Q gi|254780349|r 163 HEIESLAIEYNPK---LIIVG----GT-AYSRVW-DWERFRSIADSIGAYLMADISHISGL-VVGGQHPS-PVPH-CHIV 230 (433)
Q Consensus 163 d~~~~~a~~~kPk---lIi~G----~S-~y~~~~-d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~-Pl~~-ADvv 230 (433)
|++++++..+.|. -||+. .. ..+.+- =++++|++||++|++|++|.-++ |+ =.|..|-. -+.- .|+|
T Consensus 205 ~~le~~i~~~~~~~iAaviiEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEVqt-G~GRtG~~fa~e~~gv~PDiv 283 (445)
T PRK09221 205 DELERLVALHDASNIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVIT-GFGRLGAAFAAERFGVTPDLI 283 (445)
T ss_pred HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCC-CCCCCCCCCEEECCCCCCCEE
T ss_conf 9999999853987668999777557787141888999999999875584899841531-788135761240576799867
Q ss_pred EECCCCCCC-C--CCCEEEEECCCCHHHHCC----HHH--CHH-HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
Q ss_conf 740456522-5--674489833620565016----646--543-223445566689999999973564899999999888
Q gi|254780349|r 231 TTTTHKSLR-G--PRGGLIMTNHADLAKKIN----SAI--FPG-LQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNS 300 (433)
Q Consensus 231 t~sTHKtl~-G--PrgGiI~~~~~e~~~~i~----~av--fPg-~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA 300 (433)
|.+ |.|. | |=|+++.. + ++.+.+. ..+ |-| +.+|.-+...||+++ .+.++. .++++|+
T Consensus 284 ~~g--Kgl~gG~~Plsav~~~-~-ei~d~~~~~~~~~~~~~hg~T~~gnpla~aaa~a~--L~~i~~------~~l~~~~ 351 (445)
T PRK09221 284 TFA--KGLTNGAIPMGAVIAS-D-EIYDAFMQGPEYAIEFFHGYTYSGHPVACAAGLAT--LDIYRE------EDLFERA 351 (445)
T ss_pred EEC--CCCCCCCCCEEEEEEC-H-HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH--HHHHHH------CCHHHHH
T ss_conf 763--4356787754899965-7-89997603875553233466788898999999999--999986------4699999
Q ss_pred HHHHHHHHHC-----CCCCCCCCCCCCEEE-ECCCC-CCCCHH---HHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999998616-----852334588898126-31665-567679---9999888567188037899899998889851224
Q gi|254780349|r 301 QALAKKLQFL-----GFDIVSGGTDNHLML-VDLRS-KRMTGK---RAESILGRVSITCNKNSIPFDPESPFITSGIRLG 370 (433)
Q Consensus 301 ~~La~~L~~~-----G~~vv~ggTd~H~vl-vdl~~-~~~~G~---~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlG 370 (433)
+.+.+.|.++ +.+.|..-.-.-+++ +++.+ .+-.++ ++...|-+.|+++... .+.|||-
T Consensus 352 ~~~g~~l~~~L~~L~~~~~v~dVRG~Glm~giel~~~~~~~~~~~~~~~~~~~~~Gll~~~~-----------g~~lrl~ 420 (445)
T PRK09221 352 AELAPYFEDAVHSLKGLPHVIDIRNYGLVAGIELAPRPGAPGKRGYEAFMKCFEKGLLVRYT-----------GDTIALS 420 (445)
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEC-----------CCEEEEE
T ss_conf 99999999999986269975987504089999985788855578999999999699289637-----------9979998
Q ss_pred CHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 666730799989999999999999602
Q gi|254780349|r 371 TPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 371 T~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
-|-+ +.++|++++.+.+.++|+.
T Consensus 421 PPL~----it~~eid~~~~~l~~al~~ 443 (445)
T PRK09221 421 PPLI----IEKAQIDELVDALGDALRA 443 (445)
T ss_pred CCCC----CCHHHHHHHHHHHHHHHHH
T ss_conf 9934----8999999999999999998
No 283
>PRK07678 aminotransferase; Validated
Probab=98.41 E-value=0.00033 Score=49.84 Aligned_cols=291 Identities=15% Similarity=0.190 Sum_probs=139.9
Q ss_pred HHHHHHHCCCCCEECCCHHHHHHHHHHHHHHH-------CCCC-EEEECCCCCCCCCCCCCCC---CCCCCC-----C--
Q ss_conf 99999871886301000016799999999831-------5487-4881233448411147665---433333-----2--
Q gi|254780349|r 85 IERAKKLFNVNFVNVQSHSGSQMNQGVFLALM-------HPGD-SFMGLSLDSGGHLTHGSSV---NMSGKW-----F-- 146 (433)
Q Consensus 85 ~~~a~~lF~a~~anvqp~SG~~An~av~~ALl-------~pGD-~Il~~~l~~GGHlshg~~~---~~~g~~-----~-- 146 (433)
.++..++++..+.-.=.-||+-||.+++.--- +|+- +|+++.-. + ||... +.++.. |
T Consensus 95 ae~L~~~~p~~~~vff~~SGsEAvE~AiKlAr~y~~~~g~~~r~~ii~~~~~---y--HG~T~ga~s~tg~~~~~~~~~p 169 (451)
T PRK07678 95 AEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRG---Y--HGNTMGALAATGQAQRKYKYEP 169 (451)
T ss_pred HHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCC---C--CCCCHHHHHHCCCHHCCCCCCC
T ss_conf 9999975797618995397389999999999999986099974243462674---0--3897234511574310578888
Q ss_pred -----CCCC--CCC----CCCCCCCC---HHHHHHHHHHHCCC---EEEEE------CCCCCCCCCHHHHHHHHHHCCCE
Q ss_conf -----2013--665----83235659---89999999860466---78970------55243536379999886417978
Q gi|254780349|r 147 -----KAIP--YNV----RKEDGLLD---MHEIESLAIEYNPK---LIIVG------GTAYSRVWDWERFRSIADSIGAY 203 (433)
Q Consensus 147 -----~~~~--y~~----d~~~~~ID---~d~~~~~a~~~kPk---lIi~G------~S~y~~~~d~~~l~eIa~~~ga~ 203 (433)
..++ |.. +......+ .+.+++.+.+..|. -||+. +...|-+-=++++|+|||++|.+
T Consensus 170 ~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAaii~EPi~g~gG~~~p~~~yl~~lr~lc~~~gil 249 (451)
T PRK07678 170 LAPGFLHVAPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAFIMEPIITGGGILMPPQDYMKAVHEICQKHGAL 249 (451)
T ss_pred CCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHEEECCCE
T ss_conf 88881573898423577666522667999999999987507886799999753777882318879867787741245955
Q ss_pred EEECCCCHHHH-HHHHCCCCC-CCC-CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCCHHH----CH--HHHHHHHH
Q ss_conf 99186201244-320001232-200-23567404565225---674489833620565016646----54--32234455
Q gi|254780349|r 204 LMADISHISGL-VVGGQHPSP-VPH-CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKINSAI----FP--GLQGGPFM 271 (433)
Q Consensus 204 l~~D~aH~~GL-Ia~g~~~~P-l~~-ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~av----fP--g~qg~~~~ 271 (433)
|++|.=+ .|+ =.|..|-.- +.- .|++|.+ |.|.| |=|+++.+ + ++.+.+...- |. .+.+|.-+
T Consensus 250 lI~DEV~-tGfGRtG~~fa~e~~gv~PDiv~~g--K~l~gG~~Plsav~~~-~-ei~~~~~~~~~~~~~~h~~T~~gnpl 324 (451)
T PRK07678 250 LISDEVI-CGFGRTGKAFGFMNYGVKPDIITMA--KGITSAYLPLSATAVK-K-EIYEAFKGKGEYEFFRHINTFGGNPA 324 (451)
T ss_pred EEECCCC-CCCCCCCCCCCHHHCCCCCCEEEEC--CCCCCCCCCCEEEEEC-H-HHHHHHCCCCCCCCCCCCCCCCCCHH
T ss_conf 7732240-2787456650011059527720013--3445777761677762-9-89976357887666434788987989
Q ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCCCCCCEEE-ECC-----CCCCCCH---HHHHH
Q ss_conf 66689999999973564899999999888999999861--6852334588898126-316-----6556767---99999
Q gi|254780349|r 272 HSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQF--LGFDIVSGGTDNHLML-VDL-----RSKRMTG---KRAES 340 (433)
Q Consensus 272 ~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~--~G~~vv~ggTd~H~vl-vdl-----~~~~~~G---~~a~~ 340 (433)
...||+++ .+.++. ..+..++-+-.+.|.+.|.+ ..++.|..-.-.-+++ +++ +....+. .....
T Consensus 325 a~aaa~a~--L~~l~~--~~l~~~~~~~g~~l~~~L~~~~~~~p~i~dVRG~GLm~gielv~d~~~~~p~~~~~~~~i~~ 400 (451)
T PRK07678 325 ACALALKN--LEIMEN--ENLIERSAQLGSLLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVN 400 (451)
T ss_pred HHHHHHHH--HHHHHC--CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHH
T ss_conf 99999999--999841--50999999999999999999974599888876165689999853665578799999999999
Q ss_pred HHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 888567188037899899998889851224666730799989999999999999602
Q gi|254780349|r 341 ILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 341 ~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
.+.+.|+++.++...-. ...+-||+.-|-+ +.++|++++.+.+.++|+.
T Consensus 401 ~~~~~Glli~~~g~~~~----~~~n~lr~~PPL~----it~~eid~~~~~l~~al~~ 449 (451)
T PRK07678 401 ACKEKGLIIGKNGMTVA----GYNNVLTLAPPLC----ISSEELAFVVGTLKTAMER 449 (451)
T ss_pred HHHHCCCEEECCCCCCC----CCCCEEEEECCCC----CCHHHHHHHHHHHHHHHHH
T ss_conf 99977988814787325----7899899978824----8899999999999999996
No 284
>PRK07046 aminotransferase; Validated
Probab=98.40 E-value=0.00034 Score=49.74 Aligned_cols=282 Identities=16% Similarity=0.183 Sum_probs=136.6
Q ss_pred HHHHHHHHCCCCCEECCCHHHHHHHHHHHHHH--HCCCCEEEECCCCCCCC-C------CCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999987188630100001679999999983--15487488123344841-1------147665433333220136658
Q gi|254780349|r 84 AIERAKKLFNVNFVNVQSHSGSQMNQGVFLAL--MHPGDSFMGLSLDSGGH-L------THGSSVNMSGKWFKAIPYNVR 154 (433)
Q Consensus 84 a~~~a~~lF~a~~anvqp~SG~~An~av~~AL--l~pGD~Il~~~l~~GGH-l------shg~~~~~~g~~~~~~~y~~d 154 (433)
..++.++.|+.+++-. ..||+-||+.++..- ....++|+.+.-..-|+ . +.+.+....+. .-..+++.
T Consensus 119 lae~l~~~~~~~~~~f-~~sGsEA~~~AirlAR~~TgR~~Ii~f~g~YHG~~d~~~~~~~~g~~~~~~~~--~g~~~~~~ 195 (452)
T PRK07046 119 VGEELARRFGLPYWQV-ATTASDANRFVLRWARAATGRKKILVFNGCYHGTVDDVFVDLADGRPVQRPGL--LGQVHDLT 195 (452)
T ss_pred HHHHHHHHHCCCEEEE-ECCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCC--CCCCCCCC
T ss_conf 9999898738861775-37799999999999864549976999636767860578986479986678988--89887767
Q ss_pred CCCCC---CCHHHHHHHHHHHCCCEEEEEC----C--CCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCC
Q ss_conf 32356---5989999999860466789705----5--2435363799998864179789918620124432000123220
Q gi|254780349|r 155 KEDGL---LDMHEIESLAIEYNPKLIIVGG----T--AYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVP 225 (433)
Q Consensus 155 ~~~~~---ID~d~~~~~a~~~kPklIi~G~----S--~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~ 225 (433)
..+.. =|.+.+++.+....-.-||+.. . ..|-+-=++++|++|+++|++|++|.-++ +-..-|-++.=+.
T Consensus 196 ~~~~~~~~nd~~~le~~l~~~~iAAvi~EPi~g~~G~i~p~~~fl~~lrelc~~~giLLI~DEV~T-~r~g~Gg~~~~~G 274 (452)
T PRK07046 196 ATTRVVEFNDLAALEAALADGDVACVLAEPAMTNIGMVLPEPGFWEALRELTRRHGTLLVIDETHT-ISSGPGGYTRAHG 274 (452)
T ss_pred CCCEECCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCC-CCCCCCHHHHHHC
T ss_conf 764301668789999971789867999976886788757999999999999975897999936661-0016853879868
Q ss_pred C-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCHHH---CHH------HHHHHHHHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf 0-23567404565225--674489833620565016646---543------22344556668999999997356489999
Q gi|254780349|r 226 H-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINSAI---FPG------LQGGPFMHSIAAKAVAFGEALSSEFRDYA 293 (433)
Q Consensus 226 ~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~av---fPg------~qg~~~~~~iaa~aval~Ea~~~~f~~Ya 293 (433)
- .|++|.. |.+.| |-| .+..++ ++.++++... .|+ +.+|.-+..-|++| +|.+..+++. .
T Consensus 275 v~PDl~t~g--K~iggG~P~g-a~~~~~-~i~~~~~~~~~~~~~g~~~~ggTf~gnpla~AAa~A-~L~~l~~~~~---~ 346 (452)
T PRK07046 275 LEPDFLVVG--KPIAGGVPCA-VYGFSA-ALAERARAAKASAPPGHSGIGTTLSANALAMAAMRA-TLAEVMTDAA---Y 346 (452)
T ss_pred CCCCEEEEH--HHHCCCCCEE-EECCHH-HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHHCCCH---H
T ss_conf 796667644--4312888634-340259-999888752145678756878887879899999999-9999955529---9
Q ss_pred HHHHHHHHHHHHHHH----HCCCCC-CCC-CCCCCEEEECCCCCCCCHHHH--------H----HHHHHCCEEEECCCCC
Q ss_conf 999988899999986----168523-345-888981263166556767999--------9----9888567188037899
Q gi|254780349|r 294 KQIVLNSQALAKKLQ----FLGFDI-VSG-GTDNHLMLVDLRSKRMTGKRA--------E----SILGRVSITCNKNSIP 355 (433)
Q Consensus 294 ~qvv~NA~~La~~L~----~~G~~v-v~g-gTd~H~vlvdl~~~~~~G~~a--------~----~~Le~~gI~~Nkn~iP 355 (433)
.++-+....|.+.|. +.|+.. +.| |.-....+.+-... ++.++ + ..|-+-||.+- |
T Consensus 347 ~~~~~~g~~L~~gL~~~~~~~~~~~~v~g~G~~~~~~f~~~~~~--~~~~~~~~~d~~~~~~~~~~ll~rGVll~----p 420 (452)
T PRK07046 347 AHMFALAARLAAGLRATIARHGLPWHVTRIGARVEFQFAPTPPR--NGAEAGAALDGELEHALHLYLLNRGVLIT----P 420 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCCC--CHHHHHHCCCHHHHHHHHHHHHHCCEEEC----C
T ss_conf 99999999999999999986799759975574689996078875--67888744339999999999997995588----7
Q ss_pred CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 89999888985122466673079998999999999999960
Q gi|254780349|r 356 FDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 356 ~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
+. +-+.+- |+ ..++|++++.+.+.++|.
T Consensus 421 ~~-------n~~~~s-p~-----~T~edID~~v~a~~~al~ 448 (452)
T PRK07046 421 FH-------NMMLVC-PQ-----TTAEDVDRLVAAFDACLG 448 (452)
T ss_pred CC-------CCEEEC-CC-----CCHHHHHHHHHHHHHHHH
T ss_conf 67-------547786-44-----899999999999999999
No 285
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.39 E-value=0.0002 Score=51.35 Aligned_cols=276 Identities=12% Similarity=0.068 Sum_probs=160.2
Q ss_pred HHHHHHH--HHHHHHHCCCCCEECCCHHHHH-HHHHHHHHH--HC-CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999--9999987188630100001679-999999983--15-4874881233448411147665433333220136
Q gi|254780349|r 78 DDIENIA--IERAKKLFNVNFVNVQSHSGSQ-MNQGVFLAL--MH-PGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPY 151 (433)
Q Consensus 78 d~iE~la--~~~a~~lF~a~~anvqp~SG~~-An~av~~AL--l~-pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y 151 (433)
-++|.|- +...++|.|.+-||.-.+-+.. |..|+.+|. .+ ..++++..+.-+-..+ .-..-+..+.
T Consensus 121 GrLeaL~nfQTmi~dLTGm~vaNASllDeaTAaAEAm~ma~r~~k~k~~~~~V~~~~~Pqt~--------~Vl~tra~~~ 192 (954)
T PRK12566 121 GRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTL--------SVLKTRAEGF 192 (954)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHH--------HHHHHCCCCC
T ss_conf 99999999999999987876005760008999999999989875368887998898788899--------9999603357
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEE
Q ss_conf 658323565989999999860466789705524353637999988641797899186201244320001232200-2356
Q gi|254780349|r 152 NVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIV 230 (433)
Q Consensus 152 ~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvv 230 (433)
+++-. ..|.+.+. ...-=.+++--...+....|+..+.+.+++.|+++++..- |++-+++..|=++ |||+
T Consensus 193 gie~v--v~~~~~~~---~~~~~gvlvqyP~~~G~i~d~~~~~~~ah~~gal~iv~~D----~laL~lLk~PGe~GADIa 263 (954)
T PRK12566 193 GFELV--VDEVDNLA---QHAVFGALLQYPDTHGEVRDLRPLIDQLHGQQALACVAAD----LLSLLLLTPPGELGADVV 263 (954)
T ss_pred CCEEE--ECCHHHCC---CCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEHH----HHHHHCCCCHHHCCCCEE
T ss_conf 95799--63867667---6675899997899887614756789877345928998656----768770498344187579
Q ss_pred EECCC-----CCCCCCCCEEEEECCCCHHHHC------------------------------CHHHCHHHHHHHHHHHHH
Q ss_conf 74045-----6522567448983362056501------------------------------664654322344556668
Q gi|254780349|r 231 TTTTH-----KSLRGPRGGLIMTNHADLAKKI------------------------------NSAIFPGLQGGPFMHSIA 275 (433)
Q Consensus 231 t~sTH-----Ktl~GPrgGiI~~~~~e~~~~i------------------------------~~avfPg~qg~~~~~~ia 275 (433)
.+++. =.|.||.-|++-|++ ++..++ ++|.---...--++..+|
T Consensus 264 vG~~QrfGvPmgfGGPhagffAtr~-~~kR~mPGRiVGvS~D~~G~~a~rlaLQTREQHIRReKATSNICTaQaLLA~mA 342 (954)
T PRK12566 264 LGSTQRFGVPMGYGGPHAAFFACRD-DYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIA 342 (954)
T ss_pred EEECCCCCCCCCCCCCCEEEEEEHH-HHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 8406636765567887502335724-465359974340377799795132213368999986201000027789999999
Q ss_pred HHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCC
Q ss_conf 99999999735648-9999999988899999986168523345-888981263166556767999998885671880378
Q gi|254780349|r 276 AKAVAFGEALSSEF-RDYAKQIVLNSQALAKKLQFLGFDIVSG-GTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNS 353 (433)
Q Consensus 276 a~aval~Ea~~~~f-~~Ya~qvv~NA~~La~~L~~~G~~vv~g-gTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~ 353 (433)
+.-.... -|++ +.-|++|-..|+.|++.|...||.|... +=|| +.|++.. .-....++.++.+|-+.+
T Consensus 343 amYAvYH---GPeGLk~IA~rih~~a~~la~~L~~~G~~v~~~~fFDT--l~v~~~~---~~~~i~~~A~~~~iNlR~-- 412 (954)
T PRK12566 343 GFYAVYH---GPEGLKRIAQRVHRLTAILAAGLEAKGIKRLNRHFFDT--LTLEVGG---AQAAIIESAEAAQINLRI-- 412 (954)
T ss_pred HHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEE--EEEECCC---CHHHHHHHHHHCCCEEEE--
T ss_conf 9999871---99999999999999999999999877971257861567--9996486---499999999977974787--
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 9989999888985122466673079998999999999999
Q gi|254780349|r 354 IPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQ 393 (433)
Q Consensus 354 iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~ 393 (433)
+ |. .-|.|..-|-|+ ++|+..+..++..
T Consensus 413 ~--d~------~~vgISlDEttt----~~dl~~Ll~vF~~ 440 (954)
T PRK12566 413 L--GR------GRLGLSLDETCD----EATVARLFDIFLG 440 (954)
T ss_pred E--CC------CEEEEEECCCCC----HHHHHHHHHHHHC
T ss_conf 1--69------979998056688----9999999999835
No 286
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=98.38 E-value=0.00014 Score=52.37 Aligned_cols=192 Identities=19% Similarity=0.186 Sum_probs=104.1
Q ss_pred CCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCC-CCCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCH
Q ss_conf 353637999988641797899186201244-32000123-2200-23567404565225--6744898336205650166
Q gi|254780349|r 185 SRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPS-PVPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINS 259 (433)
Q Consensus 185 ~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~-Pl~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~ 259 (433)
+-+-=++++|++|+++|++|++|.-++ |+ =.|..|-. -+.- .|++|.+ |.+.| |=+|++. ++ ++.+.+..
T Consensus 218 ~~~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~fa~~~~gv~PDii~~g--K~l~gG~Plsav~~-~~-~i~~~~~~ 292 (426)
T PRK08088 218 ASPAFMQRLRALCDQHGIMLIADEVQT-GAGRTGTFFAMEQMGVAADLTTFA--KSIAGGFPLAGVTG-RA-EVMDAIAP 292 (426)
T ss_pred CCHHHHHHHHHHHHHCCCEEECCCCCC-CCCCCCCHHHHHHCCCCCCEEEHH--HHHCCCCCCCCEEE-CH-HHHHHCCC
T ss_conf 887999999999987690587633022-877667413566419897620121--44038887500000-39-99953368
Q ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCEEE-ECCCCC----C
Q ss_conf 465432234455666899999999735648999999998889999998616--852334588898126-316655----6
Q gi|254780349|r 260 AIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL--GFDIVSGGTDNHLML-VDLRSK----R 332 (433)
Q Consensus 260 avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~--G~~vv~ggTd~H~vl-vdl~~~----~ 332 (433)
.-+-++.++..+...||+++ .+.++.+ .+..++.+..+.|.+.|.+. .+++|..-.-.-+++ |++-.. .
T Consensus 293 ~~~~~T~~gnpla~Aaa~a~--L~~l~~e--~l~~~~~~~G~~l~~~L~~l~~~~p~i~~VRG~GLm~gvelv~~~~~~~ 368 (426)
T PRK08088 293 GGLGGTYAGNPIACAAALAV--LEVFEEE--NLLQRANALGERLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSK 368 (426)
T ss_pred CCCCCCCCCCHHHHHHHHHH--HHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEEECCCCCC
T ss_conf 88788889898999999999--9999865--8999999999999999999986099889999445599999860687678
Q ss_pred CCH---HHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 767---99999888567188037899899998889851224666730799989999999999999602
Q gi|254780349|r 333 MTG---KRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 333 ~~G---~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
-+. .++-..|-+.|+++.... | ..+-|||.-| +| ..++|+++..++|.++|+.
T Consensus 369 p~~~~~~~i~~~~~~~Gll~~~~g-~-------~gnvir~~PP-L~---it~~eid~~~~~l~~al~e 424 (426)
T PRK08088 369 PAAKLTAQIVARARDKGLILLSCG-T-------YYNVLRILVP-LT---IEDAQIRQGLEIIAQCFDE 424 (426)
T ss_pred CCHHHHHHHHHHHHHCCCEEEECC-C-------CCCEEEEECC-EE---CCHHHHHHHHHHHHHHHHH
T ss_conf 789999999999996899998338-9-------9998999789-34---7899999999999999995
No 287
>PRK07483 hypothetical protein; Provisional
Probab=98.37 E-value=0.0004 Score=49.27 Aligned_cols=296 Identities=17% Similarity=0.219 Sum_probs=136.5
Q ss_pred HHHHHHHHHHHHC--CCCCEECCCHHHHHHHHHHHHHHH-------CCCC-EEEECCCCCCCCCCCCCCCCCCCCC----
Q ss_conf 9999999999871--886301000016799999999831-------5487-4881233448411147665433333----
Q gi|254780349|r 80 IENIAIERAKKLF--NVNFVNVQSHSGSQMNQGVFLALM-------HPGD-SFMGLSLDSGGHLTHGSSVNMSGKW---- 145 (433)
Q Consensus 80 iE~la~~~a~~lF--~a~~anvqp~SG~~An~av~~ALl-------~pGD-~Il~~~l~~GGHlshg~~~~~~g~~---- 145 (433)
.|.|+.+.+ +++ +.+.+- -.-||+-||.+++.--- +||. +|+++.-..=|. |.| ..+.++..
T Consensus 75 ~~~Lae~L~-~~~p~~~~~v~-f~~sGsEAve~AiklAr~y~~~~g~~~r~~ii~~~~~yHG~-t~g-als~sg~~~~~~ 150 (443)
T PRK07483 75 AEALADRLV-AAAPAGLEHVY-FVSGGSEAVEAALKLARQYFVEKGQPQRRHFIARRQSYHGN-TLG-ALAIGGNAWRRE 150 (443)
T ss_pred HHHHHHHHH-HHCCCCCCEEE-EECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC-CCC-HHHCCCCCCCCC
T ss_conf 999999999-85788858799-96866889999999999999871899872899983788788-500-110147610158
Q ss_pred ------CC--CC--CCCC-CCCCCCC--C-----HHHHHHHHHHHCCC---EEEE----EC---CCCCCCCCHHHHHHHH
Q ss_conf ------22--01--3665-8323565--9-----89999999860466---7897----05---5243536379999886
Q gi|254780349|r 146 ------FK--AI--PYNV-RKEDGLL--D-----MHEIESLAIEYNPK---LIIV----GG---TAYSRVWDWERFRSIA 197 (433)
Q Consensus 146 ------~~--~~--~y~~-d~~~~~I--D-----~d~~~~~a~~~kPk---lIi~----G~---S~y~~~~d~~~l~eIa 197 (433)
.. .+ +|+. +...... + .++++..+.+..|+ -||+ |. ...+.+-=++++|++|
T Consensus 151 ~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAavi~EPi~g~~gG~~~p~~~fl~~lr~lc 230 (443)
T PRK07483 151 PFAPLLIEAHHVSPCYAYRDQRAGETDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVC 230 (443)
T ss_pred CCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEECCHHHHHHHHHHH
T ss_conf 88888888444068875445678888789999999999999986088867899983430475885448889999999999
Q ss_pred HHCCCEEEECCCCHHHH-HHHHCCC-CCCCC-CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCCHHH--CH--HHHH
Q ss_conf 41797899186201244-3200012-32200-23567404565225---674489833620565016646--54--3223
Q gi|254780349|r 198 DSIGAYLMADISHISGL-VVGGQHP-SPVPH-CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKINSAI--FP--GLQG 267 (433)
Q Consensus 198 ~~~ga~l~~D~aH~~GL-Ia~g~~~-~Pl~~-ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~av--fP--g~qg 267 (433)
++.|++|++|.-++ |+ =.|..|- .-+.. .|+||.+ |.|.| |=|+++.. + ++.+.+.... |- ++.+
T Consensus 231 ~~~gillI~DEV~t-GfGRtG~~fa~e~~gv~PDiv~~g--Kgl~gG~~Pl~a~~~~-~-~i~~~~~~~~~~~~hg~T~~ 305 (443)
T PRK07483 231 DRYGVLLILDEVMC-GMGRTGTLFACEEDGVAPDLLTIA--KGLGAGYQPIGAVLAS-D-RIYDAIADGSGFFQHGHTYL 305 (443)
T ss_pred HHCCEEEEEECCCC-CCCCCCCCCCCCCCCCCCCCEEEC--CCCCCCCCCEEEEEEC-H-HHHHHHCCCCCCCCCCCCCC
T ss_conf 86695899961522-788543775300045589810133--3224887732799756-8-99975436875334588888
Q ss_pred HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCEEE-ECC-CCC----CCC-----
Q ss_conf 4455666899999999735648999999998889999998616--852334588898126-316-655----676-----
Q gi|254780349|r 268 GPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL--GFDIVSGGTDNHLML-VDL-RSK----RMT----- 334 (433)
Q Consensus 268 ~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~--G~~vv~ggTd~H~vl-vdl-~~~----~~~----- 334 (433)
|.-+..-||+|+ .+.++.+ ....++-+..+.|.+.|.+. .++.|..---.-+++ |++ .++ .++
T Consensus 306 gnpla~aaa~a~--L~~i~~~--~l~~~~~~~g~~l~~~L~~l~~~~p~I~dVRG~GLm~gielv~~~~~~~~~d~~~~~ 381 (443)
T PRK07483 306 GHATACAAALAV--QRVIAED--GLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKL 381 (443)
T ss_pred CCHHHHHHHHHH--HHHHHHC--CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEEEECCCCCCCCCCHHHHH
T ss_conf 998999999999--9999864--699999999999999999998649977885404148999973267656777756899
Q ss_pred HHHHHHHHHHCCEEEEC--CCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 79999988856718803--7899899998889851224666730799989999999999999602
Q gi|254780349|r 335 GKRAESILGRVSITCNK--NSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 335 G~~a~~~Le~~gI~~Nk--n~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
.......+-+.|+.+-. +.+.+ ....-|||--| +| ..++|++++.+++.++|+.
T Consensus 382 ~~~i~~~~~~~Gll~~~~g~~~~g-----~~~~~i~l~PP-L~---it~~eid~~i~~l~~aL~~ 437 (443)
T PRK07483 382 HARIKREAMARGLMVYPMGGTIDG-----VRGDHVLLAPP-FI---ITAQQIDEIVERLGDAIDA 437 (443)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCC-----CCCCEEEEECC-CC---CCHHHHHHHHHHHHHHHHH
T ss_conf 999999999789589877776457-----76998999899-62---8999999999999999999
No 288
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.37 E-value=0.00027 Score=50.47 Aligned_cols=278 Identities=14% Similarity=0.135 Sum_probs=161.8
Q ss_pred HHHHHHH--HHHHHHHCCCCCEECCCHHH-HHHHHHHHHHH--HCCC-CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999--99999871886301000016-79999999983--1548-74881233448411147665433333220136
Q gi|254780349|r 78 DDIENIA--IERAKKLFNVNFVNVQSHSG-SQMNQGVFLAL--MHPG-DSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPY 151 (433)
Q Consensus 78 d~iE~la--~~~a~~lF~a~~anvqp~SG-~~An~av~~AL--l~pG-D~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y 151 (433)
-.+|.|- +...++|.|.+-||.-.+-+ +.|.-|+.+|. .+.. .+++.-+.-+=..+ .+ ..-+..+.
T Consensus 122 GrLeal~nfQtmi~dLTGm~vaNASllDeaTAaaEAm~ma~r~~k~k~~~~~V~~~~~Pqt~------~V--l~Tra~~~ 193 (955)
T PRK05367 122 GRLEALLNFQTMVCDLTGLPIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTL------DV--VRTRAEPL 193 (955)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHH------HH--HHHHCCCC
T ss_conf 89999999999999986876004321018999999999998862268887998898786389------99--99605357
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEE
Q ss_conf 658323565989999999860466789705524353637999988641797899186201244320001232200-2356
Q gi|254780349|r 152 NVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIV 230 (433)
Q Consensus 152 ~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvv 230 (433)
+++-. ..|.+.... ...-=.+++--...+....|+..+.+.+++.|+++++-. -|++-+++..|=++ |||+
T Consensus 194 giei~--v~d~~~~~~--~~d~~gvlvQyP~~~G~i~D~~~~~~~ah~~gal~iv~~----D~laL~lLkpPGe~GADIa 265 (955)
T PRK05367 194 GIEVV--VGDAAEALD--HDDVFGVLLQYPGTSGEVRDYRALIAAAHAAGALVAVAA----DLLALTLLTPPGEMGADIA 265 (955)
T ss_pred CCEEE--EECHHHCCC--CCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEC----CHHHHHCCCCHHHCCCCEE
T ss_conf 97799--957565677--677799999789988871787999999976597899974----6667752389666387679
Q ss_pred EECCC-----CCCCCCCCEEEEECCCCHHHHC------------------------------CHHHCHHHHHHHHHHHHH
Q ss_conf 74045-----6522567448983362056501------------------------------664654322344556668
Q gi|254780349|r 231 TTTTH-----KSLRGPRGGLIMTNHADLAKKI------------------------------NSAIFPGLQGGPFMHSIA 275 (433)
Q Consensus 231 t~sTH-----Ktl~GPrgGiI~~~~~e~~~~i------------------------------~~avfPg~qg~~~~~~ia 275 (433)
.+++. =.|.||.-|++-|++ ++..++ ++|.---...--++..+|
T Consensus 266 VGs~QrfGvPmgfGGPhagffA~~~-~~~R~mPGRiVG~S~D~~G~~ayrlaLQTREQHIRReKATSNICTaQaLLA~mA 344 (955)
T PRK05367 266 VGSAQRFGVPMGFGGPHAAYFATRD-AYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMA 344 (955)
T ss_pred EECCCCCCCCCCCCCCCEEEEEECC-CCCCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7316666777667886537888636-641589975340366589697555300148999876520101147789999999
Q ss_pred HHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCC
Q ss_conf 99999999735648-9999999988899999986168523345-888981263166556767999998885671880378
Q gi|254780349|r 276 AKAVAFGEALSSEF-RDYAKQIVLNSQALAKKLQFLGFDIVSG-GTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNS 353 (433)
Q Consensus 276 a~aval~Ea~~~~f-~~Ya~qvv~NA~~La~~L~~~G~~vv~g-gTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~ 353 (433)
+.-.... -|++ +.-|++|-..|+.|++.|...||.++.+ +=|| +.|++.. +..+...+.++.||-+.+-
T Consensus 345 ~~YAvYH---GP~GLk~IA~rih~~a~~la~~l~~~G~~v~~~~fFDT--l~v~~~~---~a~~i~~~A~~~giNlr~~- 415 (955)
T PRK05367 345 SMYAVYH---GPEGLKAIARRVHRLTAILAAGLKALGFKLVHDSFFDT--LTVEVGG---DAAAILARALAAGINLRRV- 415 (955)
T ss_pred HHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE--EEEECCC---CHHHHHHHHHHCCCEEEEE-
T ss_conf 8896300---89999999999999999999999978984457871027--9996585---5999999999769728983-
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 99899998889851224666730799989999999999999
Q gi|254780349|r 354 IPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQI 394 (433)
Q Consensus 354 iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~ 394 (433)
|. ..|.|..-|-|+ ++|+..|..++...
T Consensus 416 ---d~------~~v~iSlDEttt----~~dl~~l~~~f~~~ 443 (955)
T PRK05367 416 ---DD------DAVGISLDETTT----REDVAALLSVFGDG 443 (955)
T ss_pred ---CC------CEEEEEECCCCC----HHHHHHHHHHHHCC
T ss_conf ---69------969999358799----99999999997132
No 289
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.35 E-value=0.00044 Score=48.98 Aligned_cols=178 Identities=21% Similarity=0.271 Sum_probs=90.7
Q ss_pred HHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCC-CCCCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCHHHCHH
Q ss_conf 7999988641797899186201244-3200012-32200-23567404565225--674489833620565016646543
Q gi|254780349|r 190 WERFRSIADSIGAYLMADISHISGL-VVGGQHP-SPVPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINSAIFPG 264 (433)
Q Consensus 190 ~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~-~Pl~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~avfPg 264 (433)
+++++++|+++|++|++|.-.+ |+ --|..|. +-+.- .|+|+.+ |.|.| |-|+++.. + ++.. ..+|
T Consensus 245 l~~l~~lc~~~gillI~DEV~t-GfGRtG~~fa~e~~gv~PDiv~~g--K~lggG~Plsav~~~-~-~i~~-----~~~g 314 (442)
T PRK05769 245 FKELRKLADKYGILLIVDEVQT-GFGRTGKMFAIEHFGVEPDIITLA--KAIAGGLPLGAVIGR-A-ELMF-----LPPG 314 (442)
T ss_pred HHHHHHHHHHCCCEEECCCCCC-CCCCCCCCCHHHCCCCCCCEEEEC--CHHCCCCCEEEEEEC-H-HHHC-----CCCC
T ss_conf 9899999987493587111012-777556621310467788889974--010388740899980-6-7503-----7778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCCCCCCCCEEE-ECCC-CCC-CCH
Q ss_conf 2234455666899999999735648999999998889999998616------852334588898126-3166-556-767
Q gi|254780349|r 265 LQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL------GFDIVSGGTDNHLML-VDLR-SKR-MTG 335 (433)
Q Consensus 265 ~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~------G~~vv~ggTd~H~vl-vdl~-~~~-~~G 335 (433)
..++.+..+-.+.|+++.- ++ .++ +..++|++.+++.|.++ .++.+..-.-..+++ +++. +++ -..
T Consensus 315 ~h~~T~~g~pl~~aaa~a~-L~-~le---e~l~~~v~~~G~~l~~~L~~l~~~~p~v~~vRG~Gl~~giel~~~~~~~~~ 389 (442)
T PRK05769 315 SHANTFGGNPVAAAAALAT-LE-LIE---EGLLENAARLGEYLLKRLTELKEEYEFIGDVRGLGLMIGVELVKDRKEPDP 389 (442)
T ss_pred CCCCCCCCCHHHHHHHHHH-HH-HHH---HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCCCCCCH
T ss_conf 7151899867999999999-99-998---889999999999999999999862998676034345999998157778799
Q ss_pred HH---HHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99---99988856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 336 KR---AESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 336 ~~---a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
.. +.+.+-+.|+++-. .. ++.||+.-| +| +.++|+.++.+.+.++|+
T Consensus 390 ~~~~~~~~~~~~~Gvl~~~----~g------~~~i~~~Pp-L~---it~~eid~~~~~l~~al~ 439 (442)
T PRK05769 390 KLRDKVLREAFKRGLLLLG----AG------KSAIRIIPP-LV---ITEEEADTGLEILEEAIK 439 (442)
T ss_pred HHHHHHHHHHHHCCEEEEE----CC------CCEEEEECC-CC---CCHHHHHHHHHHHHHHHH
T ss_conf 9999999999969959931----79------997999799-46---999999999999999999
No 290
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.33 E-value=0.00049 Score=48.67 Aligned_cols=286 Identities=19% Similarity=0.206 Sum_probs=137.6
Q ss_pred HHHHHHCCCCCEECC-CHHHHHHHHHHHHHH-------HCCC-CEEEECCCCCCCCCCCCCCCCCCCC-----CC-----
Q ss_conf 999987188630100-001679999999983-------1548-7488123344841114766543333-----32-----
Q gi|254780349|r 86 ERAKKLFNVNFVNVQ-SHSGSQMNQGVFLAL-------MHPG-DSFMGLSLDSGGHLTHGSSVNMSGK-----WF----- 146 (433)
Q Consensus 86 ~~a~~lF~a~~anvq-p~SG~~An~av~~AL-------l~pG-D~Il~~~l~~GGHlshg~~~~~~g~-----~~----- 146 (433)
++..++......-|. .-||+-||.+++..- .+++ .+|+++.-..=|.. .| ..++++. .|
T Consensus 108 e~L~~~~p~~~~~v~f~~SGseA~E~AiKlAr~y~~~~g~~~r~~ii~~~~syHG~T-~g-a~s~s~~~~~~~~~~~~~~ 185 (462)
T PRK06916 108 EKLIEVVPEGLKKVFYSDSGSSAVEIAIKMAFQYWQHKGKPKKQRFVTLKEAYHGDT-IG-AVSVGAIDLFHQVYSSLLF 185 (462)
T ss_pred HHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC-CC-CCCCCCCCCCCCCCCCCCC
T ss_conf 999985775548799549749999999999999999828887637998368858775-20-0104674113577778788
Q ss_pred --CCCCCCC--------CCCC-CCCCHHHHHHHHHHHCCC--EEEE-----ECCC-CCCC-CCHHHHHHHHHHCCCEEEE
Q ss_conf --2013665--------8323-565989999999860466--7897-----0552-4353-6379999886417978991
Q gi|254780349|r 147 --KAIPYNV--------RKED-GLLDMHEIESLAIEYNPK--LIIV-----GGTA-YSRV-WDWERFRSIADSIGAYLMA 206 (433)
Q Consensus 147 --~~~~y~~--------d~~~-~~ID~d~~~~~a~~~kPk--lIi~-----G~S~-y~~~-~d~~~l~eIa~~~ga~l~~ 206 (433)
...+|+. +++. ..-+.+++++++++...+ -||+ |..- .+.| -=++++|+||+++|.+|++
T Consensus 186 ~~~~~p~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~iAaviiEP~iqg~gG~~~~p~~yl~~lr~lc~~~gillI~ 265 (462)
T PRK06916 186 EAIKMPYPYTYRSPYGNDKEEIVKKHLEEMEELLKEKHEEIAAIIVEPLMQGAGGMITMPKGYLKGLRNLCTKYNVLFIT 265 (462)
T ss_pred CCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEC
T ss_conf 84676899755676789878999999999999997579976699996144578996578789999999998605972672
Q ss_pred CCCCHHHH-HHHHCCC-CCCCC-CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCC-----HHHCH--HHHHHHHHHH
Q ss_conf 86201244-3200012-32200-23567404565225---674489833620565016-----64654--3223445566
Q gi|254780349|r 207 DISHISGL-VVGGQHP-SPVPH-CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKIN-----SAIFP--GLQGGPFMHS 273 (433)
Q Consensus 207 D~aH~~GL-Ia~g~~~-~Pl~~-ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~-----~avfP--g~qg~~~~~~ 273 (433)
|.-++ |+ =-|..|- +-+.- .|++|.+ |.|.| |-|+++.+ + ++.+.+. ...|. .+.+|.-+..
T Consensus 266 DEV~T-GfGRtG~~fa~e~~gv~PDiv~~g--Kgl~gG~~Pl~av~~~-~-~i~~~~~~~~~~~~~~~hg~T~~GnPla~ 340 (462)
T PRK06916 266 DEVAT-GFGRTGKMFACEHENVTPDILTAG--KGLTGGYLPIAITVTT-D-EIYNAFLGDYEEQKTFFHGHSYTGNPLGC 340 (462)
T ss_pred CCCCC-CCCCCCCCCHHHCCCCCCCHHHHC--HHCCCCCCCEEEEEEH-H-HHHHHHCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 54302-787556711664279668834312--1103787762799761-8-98875316654566655677788887999
Q ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCEEE-ECCC-CCC----C--C---HHHHHHH
Q ss_conf 6899999999735648999999998889999998616-852334588898126-3166-556----7--6---7999998
Q gi|254780349|r 274 IAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHLML-VDLR-SKR----M--T---GKRAESI 341 (433)
Q Consensus 274 iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~vl-vdl~-~~~----~--~---G~~a~~~ 341 (433)
-||+|+- +.++. ..+.+++.+....|.+.|.+. .++.|+.=.--.+++ +++. ++. . + +.+....
T Consensus 341 Aaa~a~L--~~i~~--e~l~~~v~~~g~~l~~~L~~l~~~~~v~dVRG~Gl~~gielv~~~~~~~~~~~~~~~~~~i~~~ 416 (462)
T PRK06916 341 AVAIANL--ELYEK--TNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFPWTERVGVQVCKR 416 (462)
T ss_pred HHHHHHH--HHHHH--CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHH
T ss_conf 9999999--99996--6889999999999999999862699858772477189999832665467785578999999999
Q ss_pred HHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 88567188037899899998889851224666730799989999999999999602
Q gi|254780349|r 342 LGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 342 Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
+...|+++... .+-||+. |+++ +.++|+.++.+++.++|+.
T Consensus 417 ~~~~Gll~~~~-----------gn~i~~~-PPL~---it~~eid~~~~il~~al~e 457 (462)
T PRK06916 417 SRELGMILRPL-----------GNTIVFM-PPLA---STIDELDEMLRILYKAISD 457 (462)
T ss_pred HHHCCEEEEEC-----------CCEEEEE-CCCC---CCHHHHHHHHHHHHHHHHH
T ss_conf 99699499744-----------9999998-9934---8899999999999999999
No 291
>PRK07481 hypothetical protein; Provisional
Probab=98.33 E-value=0.00038 Score=49.41 Aligned_cols=269 Identities=19% Similarity=0.256 Sum_probs=128.7
Q ss_pred CHHHHHHHHHHHHHHH-------CCC-CEEEECCCCC-CCCCCCCCCCCCCC-----CCC-------CCC--CCCCCCCC
Q ss_conf 0016799999999831-------548-7488123344-84111476654333-----332-------201--36658323
Q gi|254780349|r 101 SHSGSQMNQGVFLALM-------HPG-DSFMGLSLDS-GGHLTHGSSVNMSG-----KWF-------KAI--PYNVRKED 157 (433)
Q Consensus 101 p~SG~~An~av~~ALl-------~pG-D~Il~~~l~~-GGHlshg~~~~~~g-----~~~-------~~~--~y~~d~~~ 157 (433)
.-||+-||.+++..-- +|+ .+|+++.-.. |-++. ..++++ ..| ..+ ||.... .
T Consensus 110 ~~SGseA~E~AiKlAr~y~~~~g~~~r~~Ii~~~~syHG~t~g---~~s~sg~~~~~~~~~~~~~~~~~~~~p~~~~~-p 185 (448)
T PRK07481 110 SSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFG---GASVNGNTVFRRNYEPLLPGCFHVETPWLYRN-P 185 (448)
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCH---HHHCCCCCCCCCCCCCCCCCEEEECCCCCCCC-C
T ss_conf 4977999999999999999971898863699636863776622---12146884344688899998278268752237-7
Q ss_pred CCCC--------HHHHHHHHHHHCCC---EEEE----E--CCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHC
Q ss_conf 5659--------89999999860466---7897----0--5524353637999988641797899186201244-32000
Q gi|254780349|r 158 GLLD--------MHEIESLAIEYNPK---LIIV----G--GTAYSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQ 219 (433)
Q Consensus 158 ~~ID--------~d~~~~~a~~~kPk---lIi~----G--~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~ 219 (433)
..-| .+.+++.+....|. -||+ | +...|-+-=++++|++|+++|.+|++|.-++ |+ =.|..
T Consensus 186 ~~~~~~~~~~~~~~~le~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~ 264 (448)
T PRK07481 186 FTQDPEELGRLCARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANYWPLVREVCDRHGILLIADEVVT-GFGRTGSW 264 (448)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEECCCHHHHHHHHHHHHHCCEEEEEEECCC-CCCCCCCH
T ss_conf 78998999999999999998741888479999604666797145999999999999997792799951453-88847632
Q ss_pred CCC-CCCC-CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCCHHH-----CH--HHHHHHHHHHHHHHHHHHHHHHCH
Q ss_conf 123-2200-23567404565225---674489833620565016646-----54--322344556668999999997356
Q gi|254780349|r 220 HPS-PVPH-CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKINSAI-----FP--GLQGGPFMHSIAAKAVAFGEALSS 287 (433)
Q Consensus 220 ~~~-Pl~~-ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~av-----fP--g~qg~~~~~~iaa~aval~Ea~~~ 287 (433)
|.. -+.- .|+||.+ |.|.| |-++++.+ + ++.+.+...- |. ++.+|..+...||+|+ .+.++.
T Consensus 265 fa~e~~gv~PDiv~~g--K~lggG~~Plsa~~~~-~-~i~~~~~~~~~~~~~~~hg~T~~gnpla~aaala~--L~~i~~ 338 (448)
T PRK07481 265 FGSRGWGVKPDIMCLA--KGISSGYVPLGATMVN-A-RIEDAFEANADFGGAIMHGYTYSGHPVACAAALAS--LDIVVR 338 (448)
T ss_pred HHHHCCCCCCCEEEEC--CCCCCCCCCCCHHHCC-H-HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH--HHHHHH
T ss_conf 5765689999710012--2435897764211156-8-99997656887665210066778897999999999--999975
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCEEE-ECC----CCC-CCC-----HHHHHHHHHHCCEEEECCCC
Q ss_conf 48999999998889999998616--852334588898126-316----655-676-----79999988856718803789
Q gi|254780349|r 288 EFRDYAKQIVLNSQALAKKLQFL--GFDIVSGGTDNHLML-VDL----RSK-RMT-----GKRAESILGRVSITCNKNSI 354 (433)
Q Consensus 288 ~f~~Ya~qvv~NA~~La~~L~~~--G~~vv~ggTd~H~vl-vdl----~~~-~~~-----G~~a~~~Le~~gI~~Nkn~i 354 (433)
..+..++-+..+.|.+.|.+. .++++..-.-.-+++ +++ ..+ ..+ +....+.+.+.|+++...
T Consensus 339 --~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~VRG~Glm~~ielv~d~~~~~~~~~~~~~~~~v~~~~~~~Gll~~~~-- 414 (448)
T PRK07481 339 --EDLPANAAKRGAYLLEGLQPLVERFELVGDVRGKGLMVALDLVADKATRAPIDPSKGYANAVADVARENGVLVRPS-- 414 (448)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEC--
T ss_conf --5699999999999999999999848984675522499999996066556767712799999999999699499724--
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 9899998889851224666730799989999999999999602
Q gi|254780349|r 355 PFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 355 P~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
..-||+ +|.++ +.++|++++-+.+.++|..
T Consensus 415 ---------g~~i~~-~PpL~---it~~eid~~l~~l~~al~~ 444 (448)
T PRK07481 415 ---------GTKIIL-SPPLV---IQREDVDRIVDALDAGFAA 444 (448)
T ss_pred ---------CCEEEE-ECCCC---CCHHHHHHHHHHHHHHHHH
T ss_conf ---------998999-89978---8999999999999999997
No 292
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.30 E-value=0.00053 Score=48.38 Aligned_cols=319 Identities=17% Similarity=0.182 Sum_probs=176.6
Q ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHH-HHH--HCCCC
Q ss_conf 029899998305102886579888753360067999999999999987188630100001679999999-983--15487
Q gi|254780349|r 44 IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVF-LAL--MHPGD 120 (433)
Q Consensus 44 ~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~-~AL--l~pGD 120 (433)
...+.+...+.-.-+.-.+++..+...-+-..|+|--|.+.-+ ...|-|++--+|--.-++..|+.-. .|. ..+|+
T Consensus 42 a~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdk-lApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r 120 (407)
T COG3844 42 ARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDK-LAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGR 120 (407)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHH-HHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCC
T ss_conf 6865779999999999987433543202588632253677777-644316887846972785167999999984667885
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCC--CCCCCHHHHHHHH
Q ss_conf 4881233448411147665433333-220136658323565989999999860466789705524--3536379999886
Q gi|254780349|r 121 SFMGLSLDSGGHLTHGSSVNMSGKW-FKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAY--SRVWDWERFRSIA 197 (433)
Q Consensus 121 ~Il~~~l~~GGHlshg~~~~~~g~~-~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y--~~~~d~~~l~eIa 197 (433)
+|+...-.. .-.+..+ +.+.. ..-..|.+ .+.|+.+++++.+. ..-.+|.+..-.| .+-+|+.++.++|
T Consensus 121 ~vIv~E~~~---fpTdly~-a~g~~~~~~~~~~~---~~~~~P~~~~~~~~-dd~AvV~L~~V~y~TGql~dm~aiT~~A 192 (407)
T COG3844 121 RVIVSEGDN---FPTDLYI-AEGLADLLGIGYDL---EGVIAPRALEEAIT-DDVAVVLLSHVNYKTGQLLDMRAITALA 192 (407)
T ss_pred EEEEECCCC---CCCCHHH-HCCHHHHHCCCCCC---EEEECHHHHHHHHC-CCEEEEEECCCCCCCCCEEEHHHHHHHH
T ss_conf 599645888---8851343-12366661565451---34327277887504-6557998456344434122388999988
Q ss_pred HHCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCEE--EEECCCCHHHH----C----------C---
Q ss_conf 417978991862012443200012322002356740456522567448--98336205650----1----------6---
Q gi|254780349|r 198 DSIGAYLMADISHISGLVVGGQHPSPVPHCHIVTTTTHKSLRGPRGGL--IMTNHADLAKK----I----------N--- 258 (433)
Q Consensus 198 ~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt~sTHKtl~GPrgGi--I~~~~~e~~~~----i----------~--- 258 (433)
+++|+++.+|-||.+|-+.-.++.. -+|+-.++|||.|-|-.|+. ++.-+ ...++ + .
T Consensus 193 H~~galv~wDLAHsaGavp~~Lh~~---gaDfaigcsyKYLNgGPGapa~l~v~~-~h~e~~~~~lsgW~gha~pf~m~~ 268 (407)
T COG3844 193 HQHGALVGWDLAHSAGAVPVDLHAA---GADFAIGCSYKYLNGGPGAPAGLFVAP-RHRERSWPPLSGWWGHARPFAMEE 268 (407)
T ss_pred HHCCCEEEEEHHCCCCCCCEEECCC---CCCEEEEEECEECCCCCCCCEEEEECC-CCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 7458647762011257765110346---787441010000257999720688610-224544453334357788501232
Q ss_pred -----HHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--------CCCCCCCC----CCC
Q ss_conf -----6465432234455666899999999735648999999998889999998616--------85233458----889
Q gi|254780349|r 259 -----SAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL--------GFDIVSGG----TDN 321 (433)
Q Consensus 259 -----~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~--------G~~vv~gg----Td~ 321 (433)
..+--.++|++..-.++++--+|.- .. +-=...+-+-+-+|...+.+. |+.+++-- --+
T Consensus 269 ~y~p~~ga~rf~~gt~~V~s~aal~~aLDi-fa---~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGs 344 (407)
T COG3844 269 VYAPGPGARRFLCGTQPVLSLAALEGALDI-FA---DVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGS 344 (407)
T ss_pred CCCCCCCCCCEEECCCCHHHHHHHHHHHHH-HH---HCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHCCC
T ss_conf 037676510122078226566777401346-55---33789998765678999999988415667717846613543366
Q ss_pred CEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 8126316655676799999888567188037899899998889851224666730799989999999999999602
Q gi|254780349|r 322 HLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 322 H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
|.-+-. + .|.++.+.|...|++.. -|.| +-||+|-..+-. .-.|+-.-.+-+.++|+.
T Consensus 345 qvS~~h--p---~~~~V~qaLi~rGVigD-------~R~P---~vlRfgftPlY~---~~~DVw~AV~~L~evL~t 402 (407)
T COG3844 345 QVSLYH--P---HGYQVMQALIDRGVIGD-------FREP---DVLRFGFTPLYV---SFVDVWDAVDALEEVLDT 402 (407)
T ss_pred EEEEEC--C---CHHHHHHHHHHCCCCCC-------CCCC---CEEEECCCCCEE---CHHHHHHHHHHHHHHHHH
T ss_conf 035736--8---68999999997384133-------5688---735642753111---165899999999999975
No 293
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=98.28 E-value=0.00065 Score=47.77 Aligned_cols=267 Identities=19% Similarity=0.205 Sum_probs=125.3
Q ss_pred CHHHHHHHHHHHHHH---HCC-CC-EEEECCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCC---CCHHHHHHHHHH
Q ss_conf 001679999999983---154-87-4881233448411147665433333-22013665832356---598999999986
Q gi|254780349|r 101 SHSGSQMNQGVFLAL---MHP-GD-SFMGLSLDSGGHLTHGSSVNMSGKW-FKAIPYNVRKEDGL---LDMHEIESLAIE 171 (433)
Q Consensus 101 p~SG~~An~av~~AL---l~p-GD-~Il~~~l~~GGHlshg~~~~~~g~~-~~~~~y~~d~~~~~---ID~d~~~~~a~~ 171 (433)
.-||+-||.+++.-- ..+ |. +|+++.-..=|. |.| ..++++.. |+.-..+..+.... =|.+.+++.+.+
T Consensus 140 ~nSGSEAvE~AiKlAr~y~~~~Gk~~ii~~~~syHG~-T~g-a~s~t~~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~ 217 (442)
T TIGR03372 140 CNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGK-SLG-ALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNE 217 (442)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC-CCC-CCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHH
T ss_conf 3886799999999999973268981899991677874-757-03024784335788789998255578999999999998
Q ss_pred HC-----CCEEEEE------CCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCC-CCCC-CCEEEECCCCC
Q ss_conf 04-----6678970------5524353637999988641797899186201244-32000123-2200-23567404565
Q gi|254780349|r 172 YN-----PKLIIVG------GTAYSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPS-PVPH-CHIVTTTTHKS 237 (433)
Q Consensus 172 ~k-----PklIi~G------~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~-Pl~~-ADvvt~sTHKt 237 (433)
.+ ..-+|+. +-..|-+-=++++|++||++|.++++|.-++ |+ =.|..|-. -+.- .|+||. -|.
T Consensus 218 ~~~~~~~iAaviiEPiqg~gG~~~p~~~yl~~lr~lc~~~gvllI~DEVqt-GfGRTG~~fa~e~~gV~PDIvt~--gKg 294 (442)
T TIGR03372 218 CKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT-GMGRTGKMFACEHEGVQPDILCL--AKA 294 (442)
T ss_pred HHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCC-CCCCCCCCHHHHCCCCCCCHHHH--HHH
T ss_conf 875599789999846777778744999999999999998497032362122-79847783376548999976865--454
Q ss_pred CCC---CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHH--HHHHCHHHHHHHHHHHHHHHHHHHH----HH
Q ss_conf 225---67448983362056501664654322344556668999999--9973564899999999888999999----86
Q gi|254780349|r 238 LRG---PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAF--GEALSSEFRDYAKQIVLNSQALAKK----LQ 308 (433)
Q Consensus 238 l~G---PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval--~Ea~~~~f~~Ya~qvv~NA~~La~~----L~ 308 (433)
|.| |-|+++.+ + ++.+.+... |+.+++.+...-.+.|+++ .+.+.. ..+++|++.+.+. |.
T Consensus 295 LggG~~Pi~av~~~-~-~i~~~~~~~--~~~h~sTf~Gnpla~aaalavL~~i~~------~~l~~~~~~~G~~l~~~L~ 364 (442)
T TIGR03372 295 LGGGVMPIGATIAT-E-AVFSVLFDN--PFLHTTTFGGNPLACAAALATINELLE------KNLPAQAAIKGDFLLDGFQ 364 (442)
T ss_pred HCCCCCCEEEEEEC-H-HHHHHHHCC--CCCCCCCCCCCHHHHHHHHHHHHHHHH------CCHHHHHHHHHHHHHHHHH
T ss_conf 15887762689750-9-998776248--975478889899999999999999986------5699999999999999999
Q ss_pred HC--CC-CCCCCCCCCCEEE-ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHH
Q ss_conf 16--85-2334588898126-31665567679999988856718803789989999888985122466673079998999
Q gi|254780349|r 309 FL--GF-DIVSGGTDNHLML-VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDF 384 (433)
Q Consensus 309 ~~--G~-~vv~ggTd~H~vl-vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em 384 (433)
+. -+ ++|..=----+++ +++.+. -.+..+.+.|-+.|+.+..... .+.-|||--|-+ +.++|+
T Consensus 365 ~L~~~~p~~V~dVRG~GLm~giE~~~~-~~~~~~~~~~~~~gvl~~~~~~--------~~~~iri~PPL~----it~eei 431 (442)
T TIGR03372 365 QLAAEYPDLIIEARGKGLLMAIEFRDN-EIGYAFAKELFQQNILVAGTLN--------NAKSIRIEPPLT----ITIEQC 431 (442)
T ss_pred HHHHHCCCCEEEEEECCEEEEEEECCC-HHHHHHHHHHHHCCCEEEECCC--------CCCEEEEECCCC----CCHHHH
T ss_conf 998768781668564538999997881-6799999999978979985589--------989899988950----899999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999996
Q gi|254780349|r 385 EYIGELIAQIL 395 (433)
Q Consensus 385 ~~iA~li~~~L 395 (433)
+++.+.+.++|
T Consensus 432 d~~i~~l~~aL 442 (442)
T TIGR03372 432 ALVIKAAKDAL 442 (442)
T ss_pred HHHHHHHHHHC
T ss_conf 99999999869
No 294
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.22 E-value=0.00045 Score=48.87 Aligned_cols=205 Identities=16% Similarity=0.185 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHCC--CEEEE------ECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHH-HHHCCCCC-CCC-CCEE
Q ss_conf 8999999986046--67897------055243536379999886417978991862012443-20001232-200-2356
Q gi|254780349|r 162 MHEIESLAIEYNP--KLIIV------GGTAYSRVWDWERFRSIADSIGAYLMADISHISGLV-VGGQHPSP-VPH-CHIV 230 (433)
Q Consensus 162 ~d~~~~~a~~~kP--klIi~------G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLI-a~g~~~~P-l~~-ADvv 230 (433)
.+.+++.+.++.. .-||+ |+-..+-+-=++++|+|||++|++|++|.=++ |+= .|..|..- +.- .|+|
T Consensus 218 l~~l~~~i~~~~~~iAAvIvEPIqG~gG~~~~p~~yl~~lr~lc~~~giLLI~DEVqt-GfGRTG~~fa~e~~gv~PDii 296 (449)
T PRK08297 218 LRQARAAFEAHPHDIACFIAEPIQGEGGDRHFRPEFFAAMRALCDEHDALLIFDEVQT-GCGLTGTAWAYQQLGVAPDVV 296 (449)
T ss_pred HHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCEE-CCCCCCCHHHCCCCCCCCCEE
T ss_conf 9999999985899779999967874779988998999999999997188454452202-787676513313358999889
Q ss_pred EECCCCCCCCCCCEEEEECCCCHHHHCCHHHC--HH----HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Q ss_conf 74045652256744898336205650166465--43----2234455666899999999735648999999998889999
Q gi|254780349|r 231 TTTTHKSLRGPRGGLIMTNHADLAKKINSAIF--PG----LQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALA 304 (433)
Q Consensus 231 t~sTHKtl~GPrgGiI~~~~~e~~~~i~~avf--Pg----~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La 304 (433)
|.+ |.+. -||+ +... .+.+.. ..+| |+ +.+|......||+++ .+.++. ..+++|++.+.
T Consensus 297 t~~--Kgl~--~G~~-~~~~-~~~~~~-~~~~~~~~~~~sTf~Gnp~acaaala~--L~ii~~------e~l~~~~~~~g 361 (449)
T PRK08297 297 AFG--KKTQ--VCGV-MAGR-RVDEVA-DNVFAVSSRINSTWGGNLTDMVRARRI--LEVIEA------EGLFDRARQQG 361 (449)
T ss_pred EEC--CCCC--CCCH-HHHH-HHHHHH-HHHHCCCCCCCCCCCCCHHHHHHHHHH--HHHHHH------HHHHHHHHHHH
T ss_conf 877--6334--5507-7889-999999-886416877788889888999999999--999843------04999999999
Q ss_pred HHHHHC------CC-CCCCCCCCCCEEE-ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 998616------85-2334588898126-316655676799999888567188037899899998889851224666730
Q gi|254780349|r 305 KKLQFL------GF-DIVSGGTDNHLML-VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTT 376 (433)
Q Consensus 305 ~~L~~~------G~-~vv~ggTd~H~vl-vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTt 376 (433)
+.|.++ -+ ++++.-----+++ +++.... +..++...+-+.|+++.... ...|||. |.+|
T Consensus 362 ~~l~~~L~~l~~~~p~ii~dVRG~GLm~giel~~~~-~~~~~~~~~~~~Gll~~~~g----------~~~irl~-PPL~- 428 (449)
T PRK08297 362 AYLLARLDELAAEFPAVVLDPRGRGLMCAFSLPTTA-DRDELIRRLWRERVILLPAG----------EDSVRFR-PALT- 428 (449)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCHH-HHHHHHHHHHHCCCEEEECC----------CCEEEEE-CCCC-
T ss_conf 999999999997689844653115689999828867-89999999997895897579----------9979998-9912-
Q ss_pred CCCCHHHHHHHHHHHHHHHHC
Q ss_conf 799989999999999999602
Q gi|254780349|r 377 RGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 377 rG~~e~em~~iA~li~~~L~~ 397 (433)
+.++|+.+.-+.+.++|+.
T Consensus 429 --it~~eid~~~~~l~~al~e 447 (449)
T PRK08297 429 --VSRAEIDAAVDAVRRVLRT 447 (449)
T ss_pred --CCHHHHHHHHHHHHHHHHH
T ss_conf --8899999999999999998
No 295
>PRK07323 consensus
Probab=98.22 E-value=0.00085 Score=46.96 Aligned_cols=269 Identities=20% Similarity=0.250 Sum_probs=131.0
Q ss_pred CHHHHHHHHHHHHHHH-C-CCCEEEECCCCCCCCCCCCCCCCCCC------C-------CCCCCCCCC--CCC-------
Q ss_conf 0016799999999831-5-48748812334484111476654333------3-------322013665--832-------
Q gi|254780349|r 101 SHSGSQMNQGVFLALM-H-PGDSFMGLSLDSGGHLTHGSSVNMSG------K-------WFKAIPYNV--RKE------- 156 (433)
Q Consensus 101 p~SG~~An~av~~ALl-~-pGD~Il~~~l~~GGHlshg~~~~~~g------~-------~~~~~~y~~--d~~------- 156 (433)
.-||+-||.+++...- - ...+|+++.-..=|+ |.|. .+++| . ....++|+. ...
T Consensus 126 ~~SGsEAvE~AiklAr~~tgr~~iis~~~~yHG~-T~ga-~s~tg~~~~~~~~~~p~~~~~~~~p~p~~~~~~~~~~~~~ 203 (443)
T PRK07323 126 GNSGAESVEAAIKLARYHTGRSHIIAFLGAFHGR-TYGA-MSLTGSKTVYRQGFGPLLPGVSHIPYPNPFRPPLGSTPEE 203 (443)
T ss_pred ECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC-CCCH-HHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHH
T ss_conf 3774689999999999846998799970787898-7642-4312883000135688899906706876323434687267
Q ss_pred CCCCCHHHHHHHHHHHCC----CEEEE----ECCCCCCCC--CHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCC-CC
Q ss_conf 356598999999986046----67897----055243536--37999988641797899186201244-32000123-22
Q gi|254780349|r 157 DGLLDMHEIESLAIEYNP----KLIIV----GGTAYSRVW--DWERFRSIADSIGAYLMADISHISGL-VVGGQHPS-PV 224 (433)
Q Consensus 157 ~~~ID~d~~~~~a~~~kP----klIi~----G~S~y~~~~--d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~-Pl 224 (433)
......+.++++++...| .-+|+ |..-+..+- =++++|++|++.|.+|++|.-+. |+ =.|..|-. =+
T Consensus 204 ~~~~~~~~le~~~~~~~~~~~iAAvi~EPiqg~gG~~~pp~~yl~~lr~lc~~~~illI~DEV~t-GfGRtG~~fa~e~~ 282 (443)
T PRK07323 204 CGHAVLDHLESLFQTVLPAEEVAAIVVEPIQGEGGYIVPPDGFLPRLRAICDRHGILLVVDEVQA-GMGRTGRLFAIEHW 282 (443)
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCC-CCCCCCCCCHHHCC
T ss_conf 89999999999998517899789999868778889856998999999999998497588674232-78866643020146
Q ss_pred CC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 00-23567404565225--6744898336205650166465432234455666899999999735648999999998889
Q gi|254780349|r 225 PH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQ 301 (433)
Q Consensus 225 ~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~ 301 (433)
.- -|+||.+ |.|.| |=++++ +++ ++..-.... .-.+.+|..+..-||+++- |.++ ....+++.+...
T Consensus 283 gv~PDiv~~g--Kglg~G~Plsav~-~~~-~i~~~~~g~-h~~T~~gnpl~~aaa~a~L--~iie---~~l~~~v~~~g~ 352 (443)
T PRK07323 283 GVQPDIITLA--KGIASGMPLGAIL-ARE-ELMTWPPGS-HGTTFGGNPVAAAAAHATL--DLLE---GGLMENAARMGE 352 (443)
T ss_pred CCCCCEEEEC--HHHCCCCCEEEEE-ECH-HHHCCCCCC-CCCCCCCCHHHHHHHHHHH--HHHH---HHHHHHHHHHHH
T ss_conf 9788889871--3432887318999-857-861365677-6536589748999999999--9998---779999999999
Q ss_pred HHHHHHHHC--CCCCCCCCCCCCEEE-ECCC-CCC-CCH---HHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 999998616--852334588898126-3166-556-767---99999888567188037899899998889851224666
Q gi|254780349|r 302 ALAKKLQFL--GFDIVSGGTDNHLML-VDLR-SKR-MTG---KRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPS 373 (433)
Q Consensus 302 ~La~~L~~~--G~~vv~ggTd~H~vl-vdl~-~~~-~~G---~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~a 373 (433)
.|.+.|.+. .+++|+.-.-.-+++ +++. +.+ -+. .++.+.+-+.|+++.. .. ++.||+.-|=
T Consensus 353 ~l~~~L~~l~~~~p~v~~vRG~GL~~giel~~~~~~~~~~~~~~i~~~~~~~Gll~~~----~g------~~~ir~~PPL 422 (443)
T PRK07323 353 FLLAELRQLQDRFPFLGDVRGRGLMIGLDFVDPDGNPDGDLRDRAVRLAFEKGLLLLG----CG------KAAIRICPPL 422 (443)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEE----CC------CCEEEEECCE
T ss_conf 9999999988609979987315639999995488884889999999999979979983----69------9989997891
Q ss_pred HHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 73079998999999999999960
Q gi|254780349|r 374 GTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 374 iTtrG~~e~em~~iA~li~~~L~ 396 (433)
+ +.++|+.++-+++.++|+
T Consensus 423 ~----is~~eid~~l~~l~~al~ 441 (443)
T PRK07323 423 V----LTREEAATGLDILREVFR 441 (443)
T ss_pred E----CCHHHHHHHHHHHHHHHH
T ss_conf 0----889999999999999998
No 296
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase; InterPro: IPR012749 This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family..
Probab=98.22 E-value=0.00086 Score=46.95 Aligned_cols=293 Identities=17% Similarity=0.184 Sum_probs=184.6
Q ss_pred HHHHHHHHHHCCCCCEECCCHHHHHH-HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999871886301000016799-99999983154874881233448411147665-43333322013665832356
Q gi|254780349|r 82 NIAIERAKKLFNVNFVNVQSHSGSQM-NQGVFLALMHPGDSFMGLSLDSGGHLTHGSSV-NMSGKWFKAIPYNVRKEDGL 159 (433)
Q Consensus 82 ~la~~~a~~lF~a~~anvqp~SG~~A-n~av~~ALl~pGD~Il~~~l~~GGHlshg~~~-~~~g~~~~~~~y~~d~~~~~ 159 (433)
..|..=..+-++++-+-.-| |++.| -|++++-=++|||.|+-+|-.. . +.. .|..|+-..++.++.++|++
T Consensus 34 ~~C~~Wl~~~~~~~K~lLTp-SCT~aLEmaAlL~Di~~GDEVIMPSyTF---V---STANAFvLRGa~~vFVDir~dTmN 106 (376)
T TIGR02379 34 RRCEAWLEERTGTKKALLTP-SCTAALEMAALLLDIQPGDEVIMPSYTF---V---STANAFVLRGAKIVFVDIRPDTMN 106 (376)
T ss_pred HHHHHHHHHHHCCCCCCCCC-HHHHHHHHHHHHHCCCCCCEEECCCCHH---H---HHHHHHHHCCCEEEEEEECCCCCC
T ss_conf 67789998851566421160-2567999999983046888367575145---7---766778672882799960420004
Q ss_pred CCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCCCC-
Q ss_conf 5989999999860466789705524353637999988641797899186201244320001232200-23567404565-
Q gi|254780349|r 160 LDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTHKS- 237 (433)
Q Consensus 160 ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKt- 237 (433)
||-..+|. |...|.|.|+. -..-.-..|...+-.||+++.-+++-|+|+-+ . .-.-..||.- -|+-+.|.|-|
T Consensus 107 iDe~~IE~-AIt~rT~aIvp-VHYaGVaC~M~tIM~la~k~~L~ViEDAAQG~--~-S~YkgraLG~IGh~g~fSFHETK 181 (376)
T TIGR02379 107 IDETKIEA-AITERTKAIVP-VHYAGVACDMDTIMALANKHELFVIEDAAQGV--M-STYKGRALGSIGHLGAFSFHETK 181 (376)
T ss_pred CCHHHHHH-HHCCCCEEEEE-EECCCEECCHHHHHHHHHHCCEEEEEECCCCC--C-CCCCCCCCCCHHCHHCCCCCCCC
T ss_conf 67678988-63258718998-73364210547898776434616996200474--1-01278766440000021100013
Q ss_pred --CCCCCCEEEEECCCCHHHH--------CCHHHC-HHH---------HHHHHHHHHHH-HH-HHHHHHHC------HHH
Q ss_conf --2256744898336205650--------166465-432---------23445566689-99-99999735------648
Q gi|254780349|r 238 --LRGPRGGLIMTNHADLAKK--------INSAIF-PGL---------QGGPFMHSIAA-KA-VAFGEALS------SEF 289 (433)
Q Consensus 238 --l~GPrgGiI~~~~~e~~~~--------i~~avf-Pg~---------qg~~~~~~iaa-~a-val~Ea~~------~~f 289 (433)
..|-.||.++-|++.+.+| -|++-| -|. =|++++..+.| -. +.|.+|.. ..|
T Consensus 182 Ny~~GGEGGalliNd~~~~~RAEIirEKGT~Rs~FfrG~VDKYTW~diGSS~L~sel~aAyL~aQl~~A~~In~~Rl~~W 261 (376)
T TIGR02379 182 NYTSGGEGGALLINDQALIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADRINQERLALW 261 (376)
T ss_pred CCCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 42125775505660778876677763058860112014302100001121002578999999999999999889999989
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCC---CCCC-CC-CCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCC
Q ss_conf 99999999888999999861685---2334-58-8898126316655676799999888567188037899899998889
Q gi|254780349|r 290 RDYAKQIVLNSQALAKKLQFLGF---DIVS-GG-TDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFIT 364 (433)
Q Consensus 290 ~~Ya~qvv~NA~~La~~L~~~G~---~vv~-gg-Td~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~ 364 (433)
..|.+. | ..|.+.|+ +.+. +. -.-|++-|.+++.. +=.+.-+.|.+..|..=-.=||--..++-..
T Consensus 262 ~~Y~~~-------l-~pl~~~g~~~lP~iP~~c~~NAHMfYikl~~~~-~R~~~i~~~k~~~i~~VfHY~PLH~~~AG~~ 332 (376)
T TIGR02379 262 QSYLDA-------L-KPLEEKGIIELPSIPEECQHNAHMFYIKLKDVD-DRSELIKELKEQEILAVFHYVPLHSSPAGRK 332 (376)
T ss_pred HHHHHH-------H-HHHHHCCCCCCCCCCHHCCCCCEEEEEECCCHH-HHHHHHHHHHHCCCEEEEEECCCCCCHHHHH
T ss_conf 999998-------6-447653742488885000567505777535766-8999999986389048995034678642110
Q ss_pred CCCCCCCHHHHH------------CCCCHHHHHHHHHHHHHHH
Q ss_conf 851224666730------------7999899999999999996
Q gi|254780349|r 365 SGIRLGTPSGTT------------RGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 365 sGiRlGT~aiTt------------rG~~e~em~~iA~li~~~L 395 (433)
-|-=-|--..|| .|+...++..|-+.+.+.+
T Consensus 333 fg~f~G~d~~TT~~Se~l~RLPl~~~l~~~~~~~vi~~~~~~~ 375 (376)
T TIGR02379 333 FGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIETLLDYL 375 (376)
T ss_pred CCCCCCCCCCCHHHCCCEEECCEEECCCHHHHHHHHHHHHHHH
T ss_conf 0220465110103212025132011565888899999999970
No 297
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.22 E-value=0.00086 Score=46.94 Aligned_cols=282 Identities=15% Similarity=0.123 Sum_probs=135.1
Q ss_pred HHHHHHHC-CCCCEECCCHHHHHHHHHHHHHH-HCC-CCEEEECCCC-CCCCCC----CCCCCCCCC-CCCCCCCCCCCC
Q ss_conf 99999871-88630100001679999999983-154-8748812334-484111----476654333-332201366583
Q gi|254780349|r 85 IERAKKLF-NVNFVNVQSHSGSQMNQGVFLAL-MHP-GDSFMGLSLD-SGGHLT----HGSSVNMSG-KWFKAIPYNVRK 155 (433)
Q Consensus 85 ~~~a~~lF-~a~~anvqp~SG~~An~av~~AL-l~p-GD~Il~~~l~-~GGHls----hg~~~~~~g-~~~~~~~y~~d~ 155 (433)
.++.++++ +.+.+-. .-||+-||++++..- .-. .++|+.+.-. ||-|.. .+......+ -...-++...-.
T Consensus 99 Ae~l~~~~p~~~~v~F-~~sGsEA~e~AiklAR~~tgr~kii~~~~~yHG~t~~~l~~~~~~~~~~~~p~~~g~p~~~~~ 177 (429)
T PRK12389 99 AKMLKEAIPSLEKVRF-VNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPESIAQ 177 (429)
T ss_pred HHHHHHHCCCCCEEEE-ECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999985788766986-268428999999999983499965411457599854322313688534689876788765556
Q ss_pred CCCC---CCHHHHHHHHHHHCCCE--EEE----EC--CCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHH-HCCCCC
Q ss_conf 2356---59899999998604667--897----05--524353637999988641797899186201244320-001232
Q gi|254780349|r 156 EDGL---LDMHEIESLAIEYNPKL--IIV----GG--TAYSRVWDWERFRSIADSIGAYLMADISHISGLVVG-GQHPSP 223 (433)
Q Consensus 156 ~~~~---ID~d~~~~~a~~~kPkl--Ii~----G~--S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~-g~~~~P 223 (433)
+... =|.+.+++.++++.+++ ||+ |. ...|-+-=++++|++|+++|++|++|.-.+ |+=.+ +-.++=
T Consensus 178 ~~~~~p~nd~~~l~~~l~~~~~~iAavI~EPi~g~~G~i~p~~~yl~~lr~lc~~~giLLI~DEV~T-GfR~g~~~a~~~ 256 (429)
T PRK12389 178 EVITVPFNDIESYKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEEVNELAHEAGALVIYDEVIT-AFRFMYGGAQDL 256 (429)
T ss_pred CEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCEECCCHHHHHHHHHHHHHCCCEEEEECCCC-CCCCCCCCHHHC
T ss_conf 5253078999999999984589668999602236788016998999999999997198899965510-315666707655
Q ss_pred CCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCH---HHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
Q ss_conf 200-23567404565225--6744898336205650166---46543223445566689999999973564899999999
Q gi|254780349|r 224 VPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINS---AIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIV 297 (433)
Q Consensus 224 l~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~---avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv 297 (433)
+.- .|++|. -|.+.| |-|++ ..++ |+.+.+.. ...-|+.+|..+..-||+|+- .+..+ ..++
T Consensus 257 ~gV~PDi~t~--gK~lggG~Pi~av-~g~~-eim~~~~~~g~~~~~gTf~gnpla~AAalA~L-~~l~~-------~~l~ 324 (429)
T PRK12389 257 LGVIPDLTAL--GKIIGGGLPIGAY-GGRQ-DIMEQVAPLGPAYQAGTMAGNPASMAAGIACL-EVLQQ-------EGVY 324 (429)
T ss_pred CCCCCCHHHE--HHHCCCCCCEEEE-EEHH-HHHHHHCCCCCCEECCCCCCCHHHHHHHHHHH-HHHHH-------CCHH
T ss_conf 3899971001--0322798644887-6779-99987315798502588886889999999999-99971-------6899
Q ss_pred HHHHHHHHHH--------HHCCCCC-C-CCCCCCCEEEECCCCCC------CCHH---HHHHHHHHCCEEEECCCCCCCC
Q ss_conf 8889999998--------6168523-3-45888981263166556------7679---9999888567188037899899
Q gi|254780349|r 298 LNSQALAKKL--------QFLGFDI-V-SGGTDNHLMLVDLRSKR------MTGK---RAESILGRVSITCNKNSIPFDP 358 (433)
Q Consensus 298 ~NA~~La~~L--------~~~G~~v-v-~ggTd~H~vlvdl~~~~------~~G~---~a~~~Le~~gI~~Nkn~iP~D~ 358 (433)
+|++.+.+.| .+.|+.+ + ..+.--++++.|-...+ -+.. ..-+.|-+.||.+. |...
T Consensus 325 ~~~~~~G~~l~~gl~~l~~~~~~~~~v~~~g~~~~i~f~~~~v~~~~~~~~~~~~~~~~~~~~ml~~Gv~~~----p~~~ 400 (429)
T PRK12389 325 EKLDELGAMLEEGILKLAEKHNITITINRLKGALTVYFTDEKVTDYDQAERSDGEAFGKFFKLMLNQGINLA----PSKY 400 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCC----CCCC
T ss_conf 999999999999999999877998799414856899945898889899861579999999999997886456----8677
Q ss_pred CCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99888985122466673079998999999999999960
Q gi|254780349|r 359 ESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 359 ~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
. ...+. --..++|+++.-+.+.++|.
T Consensus 401 ~------~~~ls------~~hTe~dId~~l~a~d~al~ 426 (429)
T PRK12389 401 E------AWFLT------TEHTEEDIEETIKAVDRAFA 426 (429)
T ss_pred C------CCCCC------CCCCHHHHHHHHHHHHHHHH
T ss_conf 7------74164------67899999999999999999
No 298
>PRK07480 putative aminotransferase; Validated
Probab=98.22 E-value=0.00087 Score=46.92 Aligned_cols=278 Identities=20% Similarity=0.233 Sum_probs=135.7
Q ss_pred HHHHHHCCCCCEE-CCCHHHHHHHHHHHHHHH-------CCCCE-EEECCCCCCCCCCCCCCC---CCCC----------
Q ss_conf 9999871886301-000016799999999831-------54874-881233448411147665---4333----------
Q gi|254780349|r 86 ERAKKLFNVNFVN-VQSHSGSQMNQGVFLALM-------HPGDS-FMGLSLDSGGHLTHGSSV---NMSG---------- 143 (433)
Q Consensus 86 ~~a~~lF~a~~an-vqp~SG~~An~av~~ALl-------~pGD~-Il~~~l~~GGHlshg~~~---~~~g---------- 143 (433)
++..+++...... .-.-||+-||.+++.--- +|+.+ |+++.-.. ||... ++++
T Consensus 104 e~L~~~~p~~l~~v~f~~SGsEA~E~AiKlAr~y~~~~g~~~r~~ii~~~~sy-----HG~T~ga~s~sg~~~~~~~~~~ 178 (459)
T PRK07480 104 AKLAEVAPAGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVVISRKNGY-----HGSTVAGASLGGMKYMHEQGDL 178 (459)
T ss_pred HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC-----CCCHHHHHHHCCCCCCCCCCCC
T ss_conf 99998488875879970875899999999999999970999870899945864-----6640666663388432345688
Q ss_pred ----CCCCCCCCCCCCCCCCCC--------HHHHHHHHHHHCCC---EEEE----E--CCCCCCCCCHHHHHHHHHHCCC
Q ss_conf ----332201366583235659--------89999999860466---7897----0--5524353637999988641797
Q gi|254780349|r 144 ----KWFKAIPYNVRKEDGLLD--------MHEIESLAIEYNPK---LIIV----G--GTAYSRVWDWERFRSIADSIGA 202 (433)
Q Consensus 144 ----~~~~~~~y~~d~~~~~ID--------~d~~~~~a~~~kPk---lIi~----G--~S~y~~~~d~~~l~eIa~~~ga 202 (433)
...-..||+... ....| .+.+++.+.+..|+ -||+ | +-..+-+-=++++|++||++|.
T Consensus 179 ~~~~~~~v~~P~~~~~-~~~~~~~~~~~~~~~~le~~i~e~~~~~iAavi~EPi~g~gG~~~~p~~yl~~lr~lc~~~gi 257 (459)
T PRK07480 179 PIPGIVHIDQPYWFGE-GGDMTPEEFGLAAARQLEAKILELGAENVAAFIGEPIQGAGGVIIPPSTYWPEIQRICRKYDI 257 (459)
T ss_pred CCCCCEECCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 8888566479874334-678986787899999999999850887657876255246688422888999999998864397
Q ss_pred EEEECCCCHHHHHHHH-CCC-CCCCC-CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCCHH--HCH--HHHHHHHHH
Q ss_conf 8991862012443200-012-32200-23567404565225---67448983362056501664--654--322344556
Q gi|254780349|r 203 YLMADISHISGLVVGG-QHP-SPVPH-CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKINSA--IFP--GLQGGPFMH 272 (433)
Q Consensus 203 ~l~~D~aH~~GLIa~g-~~~-~Pl~~-ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~a--vfP--g~qg~~~~~ 272 (433)
+|++|.=.+ |+=-.| .|- +-+.- .|+++.+ |.|.| |=|+++.+ + ++.+.+... .|. ++.+|..+.
T Consensus 258 LlI~DEV~t-GfGRTG~~fa~e~~gv~PDii~~g--KglggG~~Pl~av~~~-~-~i~~~~~~~~~~~~hg~T~~Gnpla 332 (459)
T PRK07480 258 LLVADEVIC-GFGRTGEWFGHQHFGFEPDLMTIA--KGLTSGYIPMGAVIVG-D-RVAEVLIEEGGEFNHGFTYSGHPVA 332 (459)
T ss_pred EEEEECCCC-CCCCCCCCCCCCCCCCCCCEEEEC--CCCCCCCCCCEEEEEC-H-HHHHHHHCCCCCCCCCCCCCCCHHH
T ss_conf 799973532-887554542356779888689875--2002898773699873-8-9998761178754247789999799
Q ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHH-----HHHHHHHHC-CCCCCCCCCCCCEEE-ECCC-CCC----C-----CH
Q ss_conf 66899999999735648999999998889-----999998616-852334588898126-3166-556----7-----67
Q gi|254780349|r 273 SIAAKAVAFGEALSSEFRDYAKQIVLNSQ-----ALAKKLQFL-GFDIVSGGTDNHLML-VDLR-SKR----M-----TG 335 (433)
Q Consensus 273 ~iaa~aval~Ea~~~~f~~Ya~qvv~NA~-----~La~~L~~~-G~~vv~ggTd~H~vl-vdl~-~~~----~-----~G 335 (433)
..||+|+- +.++.+ ..++|++ .|.+.|.+. .++++..-.-.-+++ |++. +.. . -|
T Consensus 333 caaala~L--~~i~~~------~l~~~~~~~~g~~l~~~l~~L~~~p~i~~vRG~Glm~giel~~~~~~~~~~~~~~~~~ 404 (459)
T PRK07480 333 AAVALANL--RILRDE------GIVERVRTDTGPYLQKRLRELADHPLVGEVRGVGLVGALELVKDKATRERFAAGGGVG 404 (459)
T ss_pred HHHHHHHH--HHHHHC------CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCCCCCCHHHHH
T ss_conf 99999999--998616------2999999999999999999851599687723055289999743744344566336899
Q ss_pred HHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 99999888567188037899899998889851224666730799989999999999999602
Q gi|254780349|r 336 KRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 336 ~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
..+.+.|-+.|+++... .+.|||. |++| +.++|++++.+.+.++|+.
T Consensus 405 ~~~~~~~~~~Gll~~~~-----------gn~l~l~-PPL~---it~~eid~~l~~l~~aL~~ 451 (459)
T PRK07480 405 TICRDHCFNNGLIMRAV-----------GDRMILS-PPLV---ISRAEIDELVEKARKALDL 451 (459)
T ss_pred HHHHHHHHHCCEEEEEC-----------CCEEEEE-CCCC---CCHHHHHHHHHHHHHHHHH
T ss_conf 99999999799499616-----------9989997-8823---8899999999999999999
No 299
>pfam00202 Aminotran_3 Aminotransferase class-III.
Probab=98.21 E-value=0.00024 Score=50.84 Aligned_cols=228 Identities=19% Similarity=0.214 Sum_probs=110.1
Q ss_pred HHHHHHHHCCC--CCEECCCHHHHHHHHHHHHHHH-------CC-CCEEEECCCCCCCCCCCCCCCCCCC----------
Q ss_conf 99999987188--6301000016799999999831-------54-8748812334484111476654333----------
Q gi|254780349|r 84 AIERAKKLFNV--NFVNVQSHSGSQMNQGVFLALM-------HP-GDSFMGLSLDSGGHLTHGSSVNMSG---------- 143 (433)
Q Consensus 84 a~~~a~~lF~a--~~anvqp~SG~~An~av~~ALl-------~p-GD~Il~~~l~~GGHlshg~~~~~~g---------- 143 (433)
..++.++++.. +.+ .-.-||+-||.+++..-- .+ ..+|+++.-..=|+.. ...+.++
T Consensus 64 lae~l~~~~p~~~~~v-~f~~sGseA~e~AiklAr~~~~~~g~t~r~~il~~~~~yHG~t~--~~~s~s~~~~~~~~~~~ 140 (338)
T pfam00202 64 LAEKLAQLTPGGLDRV-FFMNSGSEANETAIKLARQYAKKKGATGKTKIIAFSGGFHGRTL--GALSVTGSSGYKKGFGP 140 (338)
T ss_pred HHHHHHHHCCCCCCEE-EEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC--EEEEECCCCCCCCCCCC
T ss_conf 9999998578886879-98287689999999999997775378998879999388258873--05881588555556778
Q ss_pred --CCCCCCCCCCCCC--CCCCCHHHHHHHHHHHCCC---EEEEEC---C---CCCCCCCHHHHHHHHHHCCCEEEECCCC
Q ss_conf --3322013665832--3565989999999860466---789705---5---2435363799998864179789918620
Q gi|254780349|r 144 --KWFKAIPYNVRKE--DGLLDMHEIESLAIEYNPK---LIIVGG---T---AYSRVWDWERFRSIADSIGAYLMADISH 210 (433)
Q Consensus 144 --~~~~~~~y~~d~~--~~~ID~d~~~~~a~~~kPk---lIi~G~---S---~y~~~~d~~~l~eIa~~~ga~l~~D~aH 210 (433)
.+...+||+..+. ......+.+++...+..|+ -||+.. + ..+-+-=++++|++|++.|++|++|.-.
T Consensus 141 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaaviiEPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~ 220 (338)
T pfam00202 141 SLPGVYFLPYPDLEAAEEELACADEALRLIKAVHDDNIAAVIVEPIQGEGGVVPPPPGFLAGLREICKKHGVLLIADEVQ 220 (338)
T ss_pred CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCE
T ss_conf 99994574899735420015668999999998589977999998877889976798799999999974327757645310
Q ss_pred HHHH-HHHHCCC-CCCCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1244-3200012-32200-23567404565225--674489833620565016646543223445566689999999973
Q gi|254780349|r 211 ISGL-VVGGQHP-SPVPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEAL 285 (433)
Q Consensus 211 ~~GL-Ia~g~~~-~Pl~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~ 285 (433)
+ |+ -.|..+- .=+.- .|++|.+ |.|.| |-+++ ++++ ++.+.++...+-++.++.-....||+++ | +.+
T Consensus 221 t-GfgRtG~~~~~~~~gv~PDiv~~g--K~l~~G~P~sav-~~~~-~i~~~~~~~~~~~T~~g~p~~~aaa~a~-L-~~l 293 (338)
T pfam00202 221 T-GFGRTGKLFACEHYGVTPDIMTLA--KALTGGLPLSAV-LATA-EIMQAFHPGSHGGTFGGNPLACAAALAV-L-DII 293 (338)
T ss_pred E-CCCCCCCCCHHHHCCCCCEEEEEC--CCCCCCCCCCCC-CCCH-HHHHHCCCCCCCCCCCHHHHHHHHHHHH-H-HHH
T ss_conf 0-877534874023249887599956--424589987531-1647-7997177999587776649999999999-9-999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCC
Q ss_conf 56489999999988899999986168523345888981263166556
Q gi|254780349|r 286 SSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKR 332 (433)
Q Consensus 286 ~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~ 332 (433)
+. ..+++|++.+.+.|.++ ++-+. .|-++-|+|..|
T Consensus 294 ~~------~~l~~~~~~~g~~l~~~-L~~l~----~~~~v~~VRG~G 329 (338)
T pfam00202 294 ED------ENLLQNAQEKGDYLRKG-LLALQ----DKPVIGDVRGRG 329 (338)
T ss_pred HH------CCHHHHHHHHHHHHHHH-HHHHH----CCCCEEECCCCC
T ss_conf 65------58999999999999999-99854----599737733272
No 300
>KOG0629 consensus
Probab=98.20 E-value=5.3e-05 Score=55.36 Aligned_cols=233 Identities=16% Similarity=0.156 Sum_probs=144.7
Q ss_pred HHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHH---HCCC----------CEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999987188630100001679999999983---1548----------7488123344841114766543333322
Q gi|254780349|r 81 ENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLAL---MHPG----------DSFMGLSLDSGGHLTHGSSVNMSGKWFK 147 (433)
Q Consensus 81 E~la~~~a~~lF~a~~anvqp~SG~~An~av~~AL---l~pG----------D~Il~~~l~~GGHlshg~~~~~~g~~~~ 147 (433)
|.++.-|....+...--+.=...|+.+|+.++.+- .-|+ +-|+-.|. --|+|--+...+.|.+-.
T Consensus 145 ~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSe--esHYSi~kaAa~lg~gtd 222 (510)
T KOG0629 145 EVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSE--ESHYSIKKAAAFLGLGTD 222 (510)
T ss_pred HHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECC--CCHHHHHHHHHHHCCCCC
T ss_conf 999999998387778886536884067789998887611842443002038857898424--201249999998566875
Q ss_pred -CCCCCCCCCCCCCCHHHHHHHHHHHCCC-----EEE--EECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHC
Q ss_conf -0136658323565989999999860466-----789--70552435363799998864179789918620124432000
Q gi|254780349|r 148 -AIPYNVRKEDGLLDMHEIESLAIEYNPK-----LII--VGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQ 219 (433)
Q Consensus 148 -~~~y~~d~~~~~ID~d~~~~~a~~~kPk-----lIi--~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~ 219 (433)
.+..+.| +.|.++.|.+|+.+.+.|-| ++- +|.++|.-.-|+..+.+||.+++.|+++|+|---||.-...
T Consensus 223 ~c~~v~t~-e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k 301 (510)
T KOG0629 223 HCIKVKTD-ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRK 301 (510)
T ss_pred EEEEECCC-CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCHH
T ss_conf 06883255-56865669999999988854899759982478666424586788999987548799951000555124755
Q ss_pred CCCCC---CCCCEEEECCCCCCCCCC-CEEEEECCCCHHHHC-------------------CHHHCHHHHHHHHHHHHHH
Q ss_conf 12322---002356740456522567-448983362056501-------------------6646543223445566689
Q gi|254780349|r 220 HPSPV---PHCHIVTTTTHKSLRGPR-GGLIMTNHADLAKKI-------------------NSAIFPGLQGGPFMHSIAA 276 (433)
Q Consensus 220 ~~~Pl---~~ADvvt~sTHKtl~GPr-gGiI~~~~~e~~~~i-------------------~~avfPg~qg~~~~~~iaa 276 (433)
+..-| +-||-||-+-||.+.-|. .+.++++.+-+-++- |.+. -+.|.|-|.-.. -
T Consensus 302 ~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgd-K~iQCGRh~D~F-K 379 (510)
T KOG0629 302 HRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGD-KAIQCGRHVDVF-K 379 (510)
T ss_pred HHHHCCCCCCCCCEEECHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEECCCCCCC-CHHHCCCCCCHH-H
T ss_conf 57640575325741166788645861245799887778876402002443146856521003563-033247654299-9
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCC
Q ss_conf 99999997356489999999988899999986168-5233458
Q gi|254780349|r 277 KAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLG-FDIVSGG 318 (433)
Q Consensus 277 ~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G-~~vv~gg 318 (433)
+=..++---+..|++-..+++++|+.|-+.+.+++ |..+--.
T Consensus 380 lWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~ 422 (510)
T KOG0629 380 LWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFEL 422 (510)
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCC
T ss_conf 9999973256258999999999999999998726561110137
No 301
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=98.18 E-value=0.001 Score=46.40 Aligned_cols=295 Identities=16% Similarity=0.142 Sum_probs=183.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCC---CEECCCHHHHHHHHHHHHHH--HCCCCEEEECC-CCCCCCCCCCCCCCCCCC
Q ss_conf 3600679999999999999871886---30100001679999999983--15487488123-344841114766543333
Q gi|254780349|r 71 YGGCQYVDDIENIAIERAKKLFNVN---FVNVQSHSGSQMNQGVFLAL--MHPGDSFMGLS-LDSGGHLTHGSSVNMSGK 144 (433)
Q Consensus 71 y~G~~~~d~iE~la~~~a~~lF~a~---~anvqp~SG~~An~av~~AL--l~pGD~Il~~~-l~~GGHlshg~~~~~~g~ 144 (433)
-+|....-++-+....-+.+++|.+ .+-|-|..--+.-..++.+| .+|+-+...-+ .+| -|-=+.+.+.|.
T Consensus 97 AaGSSll~kLTn~l~ld~lr~~G~~s~~~~~vvP~ATGMsL~LcL~alr~~rp~a~yViw~RiDQ---KSc~K~i~~AGl 173 (444)
T TIGR03531 97 AAGSSLLYKLTNKLVKDFLKLLGLRSVKSAIVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQ---KSCIKAISTAGL 173 (444)
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCC---CCHHHHHHHCCC
T ss_conf 62328999999999999999839853265799625345189999999850188998899853555---326889986597
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC---CCC-CC-CCCHHHHHHHHHHCCCEEEECCCCHHHHHHH--
Q ss_conf 3220136658323565989999999860466789705---524-35-3637999988641797899186201244320--
Q gi|254780349|r 145 WFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGG---TAY-SR-VWDWERFRSIADSIGAYLMADISHISGLVVG-- 217 (433)
Q Consensus 145 ~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~---S~y-~~-~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~-- 217 (433)
...+++--.+.+.-..|.+++++.+++..|.=|.|=- |.| || |-|+.+++++|.+.+...++..|- ||=..
T Consensus 174 ~pivie~~l~gd~l~tdv~~ie~~i~~~g~~~i~cVlSTTScFAPR~~D~i~eiAklC~~~~IpHvVNNAY--GlQ~~~~ 251 (444)
T TIGR03531 174 EPRVIETVLDGDRLTTDVEDIERAIEEIGPENILCVLSTTSCFAPRSPDDIEEIAKICAKYDIPHVVNNAY--GLQSNKY 251 (444)
T ss_pred EEEEEEEEECCCEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHH--HHHHHHH
T ss_conf 27997407518877469999999999828676479985365459999766999999999749983784203--6617999
Q ss_pred -HCCCCCCCC--CCEEEECCCCCCCCCCCEE-EEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf -001232200--2356740456522567448-983362056501664654322344556668999999997356489999
Q gi|254780349|r 218 -GQHPSPVPH--CHIVTTTTHKSLRGPRGGL-IMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYA 293 (433)
Q Consensus 218 -g~~~~Pl~~--ADvvt~sTHKtl~GPrgGi-I~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya 293 (433)
...+.-.+. -|.+..||-|.|-=|=||- |.+.++++-++| +..+||--+. +.+.-+-++|...-...|+...
T Consensus 252 ~~~i~~A~r~GRVDa~VQStDKNflVPVGGaII~s~d~~~i~~i-s~~YPGRAS~---sp~lDlfITLLslG~~gy~~Ll 327 (444)
T TIGR03531 252 MEKINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEI-SKSYPGRASA---SPSLDVLITLLSMGSKGYLELL 327 (444)
T ss_pred HHHHHHHHHCCCCEEEEEECCCCEEEECCCEEEEECCHHHHHHH-HHCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998649831999706866254348748971888999999-8418997777---4079999999997488899999
Q ss_pred HHHHHHHHHHHHHHH----HCCCCCCCCCCCCCEEE-ECCCCC-CCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf 999988899999986----16852334588898126-316655-676799999888567188037899899998889851
Q gi|254780349|r 294 KQIVLNSQALAKKLQ----FLGFDIVSGGTDNHLML-VDLRSK-RMTGKRAESILGRVSITCNKNSIPFDPESPFITSGI 367 (433)
Q Consensus 294 ~qvv~NA~~La~~L~----~~G~~vv~ggTd~H~vl-vdl~~~-~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGi 367 (433)
++-.++-+.|-+.|. ++|-+++- -.+|.+-+ +.+... +-+-......|-.-+++--|---|++.+
T Consensus 328 ~eRke~~~~l~~~L~~~a~~~gerlL~-t~~N~IS~aitl~~l~~~~~t~lGsmLf~r~VsG~RVV~~~~~k-------- 398 (444)
T TIGR03531 328 KERKEMYKYLKELLQKLAERHGERLLD-VPENPISSAMTLNTLRPKDPTMLGSMLYSRRVTGPRVVTNGDSK-------- 398 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCEECC-CCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCE--------
T ss_conf 999999999999999999982987214-89995057787366787678999999973688756177589973--------
Q ss_pred CCCCHHHHHCCCCHHH
Q ss_conf 2246667307999899
Q gi|254780349|r 368 RLGTPSGTTRGFKEKD 383 (433)
Q Consensus 368 RlGT~aiTtrG~~e~e 383 (433)
.||..+..-+|..-+.
T Consensus 399 ~i~g~~F~~~gsh~~~ 414 (444)
T TIGR03531 399 TVGGCEFKGYGSHTSN 414 (444)
T ss_pred EECCEEEECCCCCCCC
T ss_conf 8878775067777677
No 302
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.17 E-value=0.0011 Score=46.19 Aligned_cols=270 Identities=14% Similarity=0.134 Sum_probs=135.3
Q ss_pred CHHHHHHHHHHHHHH-HCC-CCEEEECCCCCCCCCCC-CCCCCCCCCCCCC--------CCCCCCCCCCCCCHHHHHHHH
Q ss_conf 001679999999983-154-87488123344841114-7665433333220--------136658323565989999999
Q gi|254780349|r 101 SHSGSQMNQGVFLAL-MHP-GDSFMGLSLDSGGHLTH-GSSVNMSGKWFKA--------IPYNVRKEDGLLDMHEIESLA 169 (433)
Q Consensus 101 p~SG~~An~av~~AL-l~p-GD~Il~~~l~~GGHlsh-g~~~~~~g~~~~~--------~~y~~d~~~~~ID~d~~~~~a 169 (433)
.-||+-|+++++..- ..+ .++|+.+.-..-||... -.........+.. .+++....-..-|.+.+++++
T Consensus 116 ~nSGsEA~e~AiklAR~~TgR~~Ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~nd~~~~e~~~ 195 (433)
T PRK00615 116 VSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFDETNLDNLTHLVDTDLPHPLTLSLPYNDSQIFHEVM 195 (433)
T ss_pred ECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHH
T ss_conf 18839999999999722648876999967767872001231457876667898777788887852167877399999999
Q ss_pred HHHCCCE--EEE----E--CCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCC-CCCCCC-CCEEEECCCCCCC
Q ss_conf 8604667--897----0--5524353637999988641797899186201244320001-232200-2356740456522
Q gi|254780349|r 170 IEYNPKL--IIV----G--GTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQH-PSPVPH-CHIVTTTTHKSLR 239 (433)
Q Consensus 170 ~~~kPkl--Ii~----G--~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~-~~Pl~~-ADvvt~sTHKtl~ 239 (433)
+++.+++ ||+ | +-..|.+-=++++|++|+++|++|++|.-++ |+=.|..+ +.=+.- .|++|.. |.+.
T Consensus 196 ~~~~~~iAAvi~EPi~~~~G~i~p~~~yL~~lr~lc~~~giLLI~DEV~t-GfRtg~~~a~e~~gV~PDi~t~g--K~lg 272 (433)
T PRK00615 196 EQLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRFGSLSIMDEVVT-GFRVAFGGAAAIFDVKPDITVYG--KILG 272 (433)
T ss_pred HHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCC-CCEECCCHHHHHHCCCCCEEEEC--CCCC
T ss_conf 85154303578755024688768998999999999876593898513411-60625405778739986178754--5567
Q ss_pred C--CCCEEEEECCCCHHHHCC--HHHC-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH----HHHHHHHHC
Q ss_conf 5--674489833620565016--6465-432234455666899999999735648999999998889----999998616
Q gi|254780349|r 240 G--PRGGLIMTNHADLAKKIN--SAIF-PGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQ----ALAKKLQFL 310 (433)
Q Consensus 240 G--PrgGiI~~~~~e~~~~i~--~avf-Pg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~----~La~~L~~~ 310 (433)
| |-|++ +.++ ++.+.+. ..+| -|+-+|.-+..-||+|+ |.+..++.. .+++-+-.+ .|.+.+.+.
T Consensus 273 gG~Pi~Av-~g~~-~im~~~~~~g~~~~~gTf~gnpla~AAa~At-L~~l~~~~~---~~~~~~~g~~l~~gl~~~~~~~ 346 (433)
T PRK00615 273 GGLPAAAV-VAHR-SIMDHLMPEGTIFQAGTLSGNPLAMAAGKAS-IELCREEGF---YTQLSNLEQLFLSPIEEMIRSQ 346 (433)
T ss_pred CCCCEEEE-EEHH-HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH-HHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99870566-6869-9998637789865468874069999999999-999835789---9999999999999999999976
Q ss_pred CCCCC-CC-CCCCCEEEECCCCCCCCHHHH-----------HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHC
Q ss_conf 85233-45-888981263166556767999-----------998885671880378998999988898512246667307
Q gi|254780349|r 311 GFDIV-SG-GTDNHLMLVDLRSKRMTGKRA-----------ESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTR 377 (433)
Q Consensus 311 G~~vv-~g-gTd~H~vlvdl~~~~~~G~~a-----------~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtr 377 (433)
|+++. .| |.--+..+.+-...+ ..++ ...|-+-||.+. | ++...+ ..+-
T Consensus 347 g~~~~v~~~gs~~~~~f~~~~~~~--~~~~~~~d~~~~~~f~~~~l~rGV~~~----p---------~~~~~~---fis~ 408 (433)
T PRK00615 347 GFPVSLVRYGSMFSFFFRENRPTN--LDEAQLSDVEKFQTFYQEAFSKGVYLS----P---------SPFEAS---FLSS 408 (433)
T ss_pred CCCEEEEEECCEEEEEECCCCCCC--HHHHHHHHHHHHHHHHHHHHHCCCCCC----C---------CCCCCC---CCCC
T ss_conf 998899755767999967999889--999986359999999999997897889----8---------632264---6430
Q ss_pred CCCHHHHHHHHHHHHHHHHC
Q ss_conf 99989999999999999602
Q gi|254780349|r 378 GFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 378 G~~e~em~~iA~li~~~L~~ 397 (433)
-..++|+++..+.+.++|+.
T Consensus 409 aHt~edi~~t~~a~~~al~~ 428 (433)
T PRK00615 409 AHSMENLAYAQNVLIDSLEK 428 (433)
T ss_pred CCCHHHHHHHHHHHHHHHHH
T ss_conf 24999999999999999999
No 303
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.16 E-value=0.0011 Score=46.15 Aligned_cols=184 Identities=14% Similarity=0.125 Sum_probs=99.8
Q ss_pred HHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCC-CCCCC-CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCCHH---
Q ss_conf 7999988641797899186201244-3200012-32200-23567404565225---67448983362056501664---
Q gi|254780349|r 190 WERFRSIADSIGAYLMADISHISGL-VVGGQHP-SPVPH-CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKINSA--- 260 (433)
Q Consensus 190 ~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~-~Pl~~-ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~a--- 260 (433)
++++|+||+++|++|++|.=.+ |+ =.|..|. .-+.- .|+||.+ |.|.| |=++++.+ + ++++.+...
T Consensus 226 l~~lr~lc~~~gillI~DEV~T-GfGRtG~~fa~e~~gV~PDivt~g--K~l~gG~~Pl~av~~~-~-~i~~~~~~~~~~ 300 (423)
T PRK05630 226 IEGVATLCKKHDRFLIVDEIAT-GFGRTGELFATLSNGVQPDIMCVG--KALTGGFMSFAATLCT-D-KVAQLISTPNGG 300 (423)
T ss_pred HHHHHHHHCCCCCEEECCCCEE-CCCCCCCCHHHHHCCCCCCEEEEC--CHHHCCCCCEEEEEEC-H-HHHHHHCCCCCC
T ss_conf 9999987330680586364320-587456520276569977689876--2432886762799763-8-999754276788
Q ss_pred --HCHH-HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCEE-EECCCCCCCCH
Q ss_conf --6543-2234455666899999999735648999999998889999998616-85233458889812-63166556767
Q gi|254780349|r 261 --IFPG-LQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHLM-LVDLRSKRMTG 335 (433)
Q Consensus 261 --vfPg-~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~v-lvdl~~~~~~G 335 (433)
++-+ +.+|..+..-||+|+ .+.++.+ .+..++-+-.+.|.+.|.+. ..+.|..=----++ .+++.. +.+.
T Consensus 301 ~~~~hg~T~~GnPl~~Aaa~a~--l~~i~~~--~l~~~~~~~g~~l~~~L~~L~~~p~V~dVRG~Glm~~vel~~-~~~~ 375 (423)
T PRK05630 301 GALMHGPTFMANPLACAVSHAS--LEIIETG--MWQKQVKRIEAELIAGLSPLRHLPGVADVRVLGAIGVIEMEQ-NVNV 375 (423)
T ss_pred CCEEECCCCCCCHHHHHHHHHH--HHHHHHC--CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECC-CCCH
T ss_conf 7650547999788999999999--9999847--899999999999999999870699678773055499999568-6569
Q ss_pred HHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 999998885671880378998999988898512246667307999899999999999996025
Q gi|254780349|r 336 KRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDGS 398 (433)
Q Consensus 336 ~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~~ 398 (433)
.++.+.+-+.|+++.. .. .-||+- |.+| +.++|++++.+.+.++|+++
T Consensus 376 ~~~~~~~~~~Gl~~~~----~g-------~~l~i~-PPL~---it~eei~~~~~~l~~alkg~ 423 (423)
T PRK05630 376 EEATQAALDHGVWIRP----FG-------RLLYVM-PPYI---TTSEQCAQICTALHAAVKGK 423 (423)
T ss_pred HHHHHHHHHCCCEEEE----CC-------CEEEEE-CCCC---CCHHHHHHHHHHHHHHHCCC
T ss_conf 9999999969947985----39-------999993-8936---89999999999999997789
No 304
>PRK06148 hypothetical protein; Provisional
Probab=98.16 E-value=0.0011 Score=46.10 Aligned_cols=182 Identities=18% Similarity=0.275 Sum_probs=103.7
Q ss_pred CHHHHHHHHHHCCCEEEECCCCHHHHHHHHC--CCCCCCC----CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCHH
Q ss_conf 3799998864179789918620124432000--1232200----23567404565225--67448983362056501664
Q gi|254780349|r 189 DWERFRSIADSIGAYLMADISHISGLVVGGQ--HPSPVPH----CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINSA 260 (433)
Q Consensus 189 d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~--~~~Pl~~----ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~a 260 (433)
=+++++++|++.|+++++|.-++ |+==.|. |- +++ -||||. -|.+.| |=|+++.++ ++++.++..
T Consensus 808 yl~~v~~~c~~~G~LlI~DEVQt-GfGRTG~~~fa--~e~~gV~PDIvt~--aKglg~G~PlgAv~~~~--ei~~~f~~g 880 (1015)
T PRK06148 808 YLREVYAMVRAAGGVCIADEVQV-GFGRVGSHWWA--FETQGVVPDIVTM--GKPIGNGHPMSAVVTTR--EIADSFDNG 880 (1015)
T ss_pred HHHHHHHHHHHCCCEEEEECCCC-CCCCCCCCCCE--EHHCCCCCCEEEE--CCCCCCCCCCEEEEECH--HHHHHHCCC
T ss_conf 99999999998397899954533-87823663000--0312998887986--56444786767889859--999754268
Q ss_pred H-CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCCCCCCCCEEE-ECC-CCC
Q ss_conf 6-5432234455666899999999735648999999998889999998616------852334588898126-316-655
Q gi|254780349|r 261 I-FPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL------GFDIVSGGTDNHLML-VDL-RSK 331 (433)
Q Consensus 261 v-fPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~------G~~vv~ggTd~H~vl-vdl-~~~ 331 (433)
. |-.+-||.-+.+-||+|+- +.++.+ +.++||+.+.+.|.++ .+++|..=--.-+++ |.+ +++
T Consensus 881 ~~~~sTfgGnPlacAaalavL--dii~~e------~L~~na~~~G~~l~~~L~~L~~~~p~IgdVRG~GLm~GiElV~d~ 952 (1015)
T PRK06148 881 MEYFNTFGGNPVSCAIGLAVL--DIIEDE------DLRRNALEIGNYLLAGFRSLQQRFDIIGDVRGLGLFLGIELVTDR 952 (1015)
T ss_pred CCCCCCCCCCHHHHHHHHHHH--HHHHHC------CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCC
T ss_conf 752688786999999999999--999873------799999999999999999988608968876127708999963587
Q ss_pred C---CC---HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 6---76---799999888567188037899899998889851224666730799989999999999999602
Q gi|254780349|r 332 R---MT---GKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 332 ~---~~---G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
+ -. ...+.++|.+.||+++..+ |.+ +-|||--|=+ +..++++.+.+.+.++|..
T Consensus 953 ~tk~Pa~~~~~~v~~~~~e~GvLi~~~G-~~~-------nVlri~PPL~----it~e~~D~~l~~Ld~vl~a 1012 (1015)
T PRK06148 953 KTKAPATAIARKVKDGARERGILIGTEG-PKD-------NVLKMRPPMI----FSRADADHLLEVLDDSFAA 1012 (1015)
T ss_pred CCCCCCHHHHHHHHHHHHHCCEEEECCC-CCC-------CEEEECCCCC----CCHHHHHHHHHHHHHHHHH
T ss_conf 7789639999999999997891893278-998-------8799808964----5599999999999999999
No 305
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.09 E-value=0.00051 Score=48.50 Aligned_cols=288 Identities=22% Similarity=0.270 Sum_probs=149.8
Q ss_pred HHHHHHHHHHHHHC-C-CCCEECCCHHHHHHHHHHHHH-------HHCCCCE-EEECCCCCCCCCCCCCCCCCCC-----
Q ss_conf 99999999999871-8-863010000167999999998-------3154874-8812334484111476654333-----
Q gi|254780349|r 79 DIENIAIERAKKLF-N-VNFVNVQSHSGSQMNQGVFLA-------LMHPGDS-FMGLSLDSGGHLTHGSSVNMSG----- 143 (433)
Q Consensus 79 ~iE~la~~~a~~lF-~-a~~anvqp~SG~~An~av~~A-------Ll~pGD~-Il~~~l~~GGHlshg~~~~~~g----- 143 (433)
..++||.+++..+= + .+++ .-.-|||.|+-+++.= .-+|.-+ +++.. +|=|=+.=...++.|
T Consensus 88 Pa~~LA~~L~~~aP~~~l~~v-Ff~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~--~gYHG~T~ga~Sv~g~~~~~ 164 (449)
T COG0161 88 PAIELAEKLAELAPEGGLDHV-FFTDSGSEAVETALKMALQYWRARGQPQRKKFISRR--NGYHGDTLGAMSVGGPVALR 164 (449)
T ss_pred HHHHHHHHHHHHCCCCCCCEE-EEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC--CCCCCCCCHHEECCCCHHHH
T ss_conf 699999999986798775679-980896189999999999999965997531899952--67476653001356854555
Q ss_pred -CCC---------CCCCCCC--C--CCCC-C--CCHHHHHHHHHHHCCCEE---E----E---ECCCCCCCCCHHHHHHH
Q ss_conf -332---------2013665--8--3235-6--598999999986046678---9----7---05524353637999988
Q gi|254780349|r 144 -KWF---------KAIPYNV--R--KEDG-L--LDMHEIESLAIEYNPKLI---I----V---GGTAYSRVWDWERFRSI 196 (433)
Q Consensus 144 -~~~---------~~~~y~~--d--~~~~-~--ID~d~~~~~a~~~kPklI---i----~---G~S~y~~~~d~~~l~eI 196 (433)
.+| -..||.+ . .+.. . =+.+++++++.++-|.=| | + |+-..+-+-=++++|+|
T Consensus 165 ~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~i 244 (449)
T COG0161 165 HAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREI 244 (449)
T ss_pred HHHCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 43014445576226899643457777774889999999999998609552899995520056677541876899999999
Q ss_pred HHHCCCEEEECCCCHHHHHHHHCCCCCC--CC----CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCCHH---HC--
Q ss_conf 6417978991862012443200012322--00----23567404565225---67448983362056501664---65--
Q gi|254780349|r 197 ADSIGAYLMADISHISGLVVGGQHPSPV--PH----CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKINSA---IF-- 262 (433)
Q Consensus 197 a~~~ga~l~~D~aH~~GLIa~g~~~~Pl--~~----ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~a---vf-- 262 (433)
||++|.+|++|.- +.|+ |.--..| ++ -|++|. -|-|-| |=|+.+.++ ++++.+... .|
T Consensus 245 C~ky~ILlI~DEV-~tGF---GRTG~~FA~e~~gi~PDi~~~--aKGLT~GY~Pl~a~l~~~--~I~~~~~~~~~~~f~H 316 (449)
T COG0161 245 CDKYGILLIADEV-ATGF---GRTGKMFACEHAGIVPDILCL--AKGLTGGYLPLSAVLTSD--RIYEAFSDGDAGAFMH 316 (449)
T ss_pred HHHCCCEEEECCC-EECC---CCCCHHHHHHHCCCCCCEEEE--CCCCCCCCHHHHHHHHHH--HHHHHHHCCCCCEECC
T ss_conf 9983947993011-0078---857515566525999784655--131012650107675059--9999986466870144
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCCCCCCEEE-ECCC-CCC-----
Q ss_conf -43223445566689999999973564899999999888999999861--6852334588898126-3166-556-----
Q gi|254780349|r 263 -PGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQF--LGFDIVSGGTDNHLML-VDLR-SKR----- 332 (433)
Q Consensus 263 -Pg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~--~G~~vv~ggTd~H~vl-vdl~-~~~----- 332 (433)
+.+.|+|. .+-||++. .+.+. =....+|+.+....|.+.|.+ .+.+.|..=--.-++. |++. +++
T Consensus 317 G~TYsghPl-acAaAla~--L~i~e--~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f 391 (449)
T COG0161 317 GHTYSGNPL-ACAAALAN--LDILE--EEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPF 391 (449)
T ss_pred CCCCCCCHH-HHHHHHHH--HHHHH--HCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEEECCCCCCCCC
T ss_conf 786644899-99999988--99998--56799999999999999998751369927872226559999984156666640
Q ss_pred --CCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf --76799999888567188037899899998889851224666730799989999999999999602
Q gi|254780349|r 333 --MTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 333 --~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
--+..+.+.+-+.|+++--- +| -|=+.-|-+ ..++|+.+|.+.+.++|+.
T Consensus 392 ~~~~~~~~~~~~~e~Gl~iRp~---g~--------~i~~~PPli----it~~eid~l~~~l~~al~~ 443 (449)
T COG0161 392 EARVGARVRAAALERGLLIRPL---GD--------VIYLMPPLI----ITREEIDELVDALREALDE 443 (449)
T ss_pred HHHHHHHHHHHHHHCCEEEEEC---CC--------EEEECCCCC----CCHHHHHHHHHHHHHHHHH
T ss_conf 4569999999999789389555---98--------899738834----8999999999999999999
No 306
>TIGR00461 gcvP glycine dehydrogenase; InterPro: IPR003437 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T . The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0006544 glycine metabolic process, 0005961 glycine dehydrogenase complex (decarboxylating).
Probab=98.07 E-value=0.00021 Score=51.22 Aligned_cols=318 Identities=21% Similarity=0.241 Sum_probs=217.2
Q ss_pred HHHHHCHHHHH---HHHHHHHH-----HHHCCCCCCCCCCCCHHHHHHHHCCCC---------------CCCCCCCCCCC
Q ss_conf 69785899999---99999999-----983888104301029899998305102---------------88657988875
Q gi|254780349|r 13 SLIESDPDVFS---LIGQESCR-----QNDEIQLIASENIVSRAVLEAQGSILT---------------NKYAEGYPSKR 69 (433)
Q Consensus 13 ~l~~~Dpei~~---~i~~e~~r-----q~~~l~LiASEN~~S~~v~~~l~S~l~---------------nkyaeG~pg~r 69 (433)
+.+..|.|+.. -+..|..| |....|..=||.-+=+---++.+-||+ |-.+|--|=-+
T Consensus 452 ~~~~L~~dv~~dsrSfp~~~~R~deiL~~~VFn~yHSETemlRYlH~LeskDLaLn~sMIPLGSCTMKLNataEMmPiTW 531 (965)
T TIGR00461 452 SSEELSEDVSNDSRSFPAELLRDDEILRDEVFNRYHSETEMLRYLHRLESKDLALNNSMIPLGSCTMKLNATAEMMPITW 531 (965)
T ss_pred CHHHHHHHHHHCCCCCCHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCC
T ss_conf 87777787620013467543351144304000255746899998764201347675146744420322301100267767
Q ss_pred CC----------CCCH-HHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHH----HCCCCE---EEECCCCCCC
Q ss_conf 33----------6006-7999999999999987188630100001679999999983----154874---8812334484
Q gi|254780349|r 70 YY----------GGCQ-YVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLAL----MHPGDS---FMGLSLDSGG 131 (433)
Q Consensus 70 yy----------~G~~-~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~AL----l~pGD~---Il~~~l~~GG 131 (433)
.. +-+| |-.-|-.| .+-.+++=|-+-+-.||-||++--.+=+.+. ...|.. |=-.+.+.
T Consensus 532 PeF~~iHPF~P~~Q~eGY~~lia~L-e~wL~~iTGfDaislQPNsGaQGEYaGL~vIR~YheSrgE~hRniCLIP~SA-- 608 (965)
T TIGR00461 532 PEFSEIHPFAPSEQVEGYQELIAQL-EKWLVEITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGEEHRNICLIPVSA-- 608 (965)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHH-HHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC--
T ss_conf 0105658788850225899999999-8875210576624417888844667889999998760588987445307776--
Q ss_pred CCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE--EEE-ECCCCC-CCCCHHHHHHHHHHCCCEEEE
Q ss_conf 11147-6654333332201366583235659899999998604667--897-055243-536379999886417978991
Q gi|254780349|r 132 HLTHG-SSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKL--IIV-GGTAYS-RVWDWERFRSIADSIGAYLMA 206 (433)
Q Consensus 132 Hlshg-~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPkl--Ii~-G~S~y~-~~~d~~~l~eIa~~~ga~l~~ 206 (433)
|| .+.+...-+.++|+...|. +|.||+..|...|+++--+| |++ =.|.|. |.--++.+.||.++.|--+..
T Consensus 609 ---HGTNPASA~MaGm~VVpV~Cd~-~GniDl~DL~~KAEq~gd~Laa~MvTYPSThGvfE~tI~~~~diVH~FGGqVYl 684 (965)
T TIGR00461 609 ---HGTNPASAAMAGMQVVPVKCDK-DGNIDLVDLKAKAEQYGDELAAVMVTYPSTHGVFEETIREVCDIVHRFGGQVYL 684 (965)
T ss_pred ---CCCCHHHHHHCCCEEEEEEECC-CCCEEHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHCCEEEEEECCCCEEEE
T ss_conf ---7887289961698689876569-995007777888875066525677505877664322210013114426884752
Q ss_pred CCCCHHHHHHHHCCCCCCCC-CCEEEECCCCCCCCCCC------EEEEECC--------CC---------HHHHCCHHHC
Q ss_conf 86201244320001232200-23567404565225674------4898336--------20---------5650166465
Q gi|254780349|r 207 DISHISGLVVGGQHPSPVPH-CHIVTTTTHKSLRGPRG------GLIMTNH--------AD---------LAKKINSAIF 262 (433)
Q Consensus 207 D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKtl~GPrg------GiI~~~~--------~e---------~~~~i~~avf 262 (433)
|+|----=| | .-+|=+. |||-=-.-||||.=|+| |=|-.|. .+ -.++|+
T Consensus 685 DGANMNAQV--G-ltsPgd~GADVcHLNLHKTFcIPHGGGGPgmgPIgVKsHL~pflP~~~~~s~~~~~g~~~sig---- 757 (965)
T TIGR00461 685 DGANMNAQV--G-LTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKTDVVSVVELEGESKSIG---- 757 (965)
T ss_pred CCCCCCCCC--C-CCCCCCCCCCHHHHHCCCCEECCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEEECCCCCC----
T ss_conf 456642233--6-678611056343430544201268678787752224640224588876000156531232435----
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHHHCHHHHHHHHHH-HHHHHHHHHHHHHCCCCCCCC---CCC---CCEEEECCCC---
Q ss_conf 432234--4556668999999997356489999999-988899999986168523345---888---9812631665---
Q gi|254780349|r 263 PGLQGG--PFMHSIAAKAVAFGEALSSEFRDYAKQI-VLNSQALAKKLQFLGFDIVSG---GTD---NHLMLVDLRS--- 330 (433)
Q Consensus 263 Pg~qg~--~~~~~iaa~aval~Ea~~~~f~~Ya~qv-v~NA~~La~~L~~~G~~vv~g---gTd---~H~vlvdl~~--- 330 (433)
.+|. +=...|.-+..+...++-+++-..+.+| +-||+.|++.|++. |+|+-- |++ -|=..+|+|+
T Consensus 758 --~vSaAPyGsAsiLpISw~YI~MMG~eGL~kas~vAiLnaNYma~RL~d~-ypiLf~nemg~~~~vAHEcIlDlRplK~ 834 (965)
T TIGR00461 758 --AVSAAPYGSASILPISWMYIKMMGAEGLKKASEVAILNANYMAKRLKDY-YPILFVNEMGRDKRVAHECILDLRPLKK 834 (965)
T ss_pred --CEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC-CCEEEEECCCCCCCEEEEEEECHHHHHH
T ss_conf --4523654541466889999985220135035577756266899887610-7654431157888313567635255456
Q ss_pred C-CCCHHHHHHHHHHCCE
Q ss_conf 5-6767999998885671
Q gi|254780349|r 331 K-RMTGKRAESILGRVSI 347 (433)
Q Consensus 331 ~-~~~G~~a~~~Le~~gI 347 (433)
+ ++.--++++||-.-|.
T Consensus 835 ~~gie~~DvAKRL~DyGF 852 (965)
T TIGR00461 835 KAGIEALDVAKRLIDYGF 852 (965)
T ss_pred HHCCCHHHHHHHHHCCCC
T ss_conf 517654456766411577
No 307
>KOG0256 consensus
Probab=97.98 E-value=0.00083 Score=47.04 Aligned_cols=302 Identities=19% Similarity=0.231 Sum_probs=170.1
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 06799999999999998718863010000167999999998315487488123344841114766543333322013665
Q gi|254780349|r 74 CQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNV 153 (433)
Q Consensus 74 ~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~ 153 (433)
...++-++..+..+.+ |.-+- +|-.-.++.||-+...-|..|||-.|.+....||--- ... --.+++.+|+..
T Consensus 128 qa~A~Fm~~~r~~~v~--fdP~r-~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdr---dl~-~rTgveivpv~c 200 (471)
T KOG0256 128 QAVAEFMERARGNRVK--FDPER-VVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDR---DLR-WRTGVEIVPVHC 200 (471)
T ss_pred HHHHHHHHHHHCCCCC--CCCCC-EEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCC---CCE-EECCCEEEEEEE
T ss_conf 9999999998489874--37656-6885575316677787625898510356899876322---014-203836999984
Q ss_pred CCCCC-CCCHHHHHHHHHH---HC--C-CEEEEECCCCCC-CCCHH---HHHHHHHHCCCEEEECCCCHHHHHH-HHCC-
Q ss_conf 83235-6598999999986---04--6-678970552435-36379---9998864179789918620124432-0001-
Q gi|254780349|r 154 RKEDG-LLDMHEIESLAIE---YN--P-KLIIVGGTAYSR-VWDWE---RFRSIADSIGAYLMADISHISGLVV-GGQH- 220 (433)
Q Consensus 154 d~~~~-~ID~d~~~~~a~~---~k--P-klIi~G~S~y~~-~~d~~---~l~eIa~~~ga~l~~D~aH~~GLIa-~g~~- 220 (433)
+..++ +|+.+++|.-..+ .. - .+||...|.=+- .++-+ .+-..|.+.+..++.|.- ++|=|- ...|
T Consensus 201 ~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEI-ya~sVF~~~~F~ 279 (471)
T KOG0256 201 SSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEI-YAGSVFDKSEFR 279 (471)
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEHH-HHHCCCCCCCCE
T ss_conf 0678841229999999999998189524899827999777746999999999988645627986032-100203666713
Q ss_pred ------CCC--CCC-CCEEEE-CCCCCCCCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHH
Q ss_conf ------232--200-235674-0456522567448983362056501664654322344556668999999997356489
Q gi|254780349|r 221 ------PSP--VPH-CHIVTT-TTHKSLRGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFR 290 (433)
Q Consensus 221 ------~~P--l~~-ADvvt~-sTHKtl~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~ 290 (433)
.+| .+. .|||.+ |----|||=|=|+|.++++++.....+--.-+..++.--+.+|++.-- .+..+..-+
T Consensus 280 Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYs~ne~VvsaA~kmssf~~vSs~tQ~~la~LLSD-~~f~~~yl~ 358 (471)
T KOG0256 280 SVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLVSSQTQYLLASLLSD-EEFTREYLR 358 (471)
T ss_pred EHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCH-HHHHHHHHH
T ss_conf 7898752645687727999973355698863789998667389999998750368758999999998430-889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCH--HHHH-----HHHHHCCEEEECCCCCCCCCCCCC
Q ss_conf 999999988899999986168523345888981263166556767--9999-----988856718803789989999888
Q gi|254780349|r 291 DYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTG--KRAE-----SILGRVSITCNKNSIPFDPESPFI 363 (433)
Q Consensus 291 ~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G--~~a~-----~~Le~~gI~~Nkn~iP~D~~~~~~ 363 (433)
+-.+++-.--+.+.+.|.+.|++-+.. -.---+|+|++.. ++- .+.| +.++++++ |.-||-..-...
T Consensus 359 en~~Rl~~rh~~~~~gLk~lgI~cl~s-~AGlF~wvDlr~l-L~s~tfe~El~Lw~~i~~~vkl----nlSpG~s~~C~E 432 (471)
T KOG0256 359 ENNKRLRIRHRYIVEGLKALGIPCLKS-NAGLFCWVDLRKL-LTSLTFEGELELWERILDNVKL----NLSPGSSCHCHE 432 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEC-CCCEEEEEEHHHH-CCCCCHHHHHHHHHHHHHHHCC----CCCCCCCCEECC
T ss_conf 999999999999975487648840306-8706999766774-5757818899999999986063----257997624368
Q ss_pred CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 98512246667307999899999999999996
Q gi|254780349|r 364 TSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 364 ~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
|.=.|+=-+ .|.++.++..-+-|.+.+
T Consensus 433 pGWFRvcFA-----n~~~~t~~~am~Ri~~~~ 459 (471)
T KOG0256 433 PGWFRVCFA-----NMSEETLEVAMRRLKQFL 459 (471)
T ss_pred CCEEEEEEC-----CCCHHHHHHHHHHHHHHH
T ss_conf 985899842-----488778999999999998
No 308
>PRK06942 glutamate-1-semialdehyde 2,1-aminomutase; Validated
Probab=97.98 E-value=0.0025 Score=43.76 Aligned_cols=286 Identities=14% Similarity=0.125 Sum_probs=133.4
Q ss_pred HHHHHHHHHC-CCCCEECCCHHHHHHHHHHHHHH-HCC-CCEEEECCCC-CCCCCCCCCCCCCCCC------CCCCCCCC
Q ss_conf 9999999871-88630100001679999999983-154-8748812334-4841114766543333------32201366
Q gi|254780349|r 83 IAIERAKKLF-NVNFVNVQSHSGSQMNQGVFLAL-MHP-GDSFMGLSLD-SGGHLTHGSSVNMSGK------WFKAIPYN 152 (433)
Q Consensus 83 la~~~a~~lF-~a~~anvqp~SG~~An~av~~AL-l~p-GD~Il~~~l~-~GGHlshg~~~~~~g~------~~~~~~y~ 152 (433)
|| |+.++++ +.+.+-. .-||+-||.+++..- ..+ .++|+++.-. ||-|.+.... .-++. ...-+|.+
T Consensus 95 lA-e~L~~~~P~~~~v~f-~~SGsEA~e~AiklAR~~tgr~~ii~~~g~YHG~~~~~~~~-~~~~~~~~~~p~~~g~p~~ 171 (425)
T PRK06942 95 IA-EEICKLVPSIEQVRM-VSSGTEATMSALRLARGFTGRSRIVKFEGCYHGHADSLLVK-AGSGLLTFGNPTSAGVPAD 171 (425)
T ss_pred HH-HHHHHHCCCCCEEEE-ECCHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHH-CCCCCCCCCCCCCCCCCCC
T ss_conf 99-999985889885987-38879999999999610347986531234514774102121-3787655588865688765
Q ss_pred CCCCCC---CCCHHHHHHHHHHHCCC--EEEEE----C--CCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCC-
Q ss_conf 583235---65989999999860466--78970----5--524353637999988641797899186201244320001-
Q gi|254780349|r 153 VRKEDG---LLDMHEIESLAIEYNPK--LIIVG----G--TAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQH- 220 (433)
Q Consensus 153 ~d~~~~---~ID~d~~~~~a~~~kPk--lIi~G----~--S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~- 220 (433)
+.+... .=|.+++++.+.++..+ -||+. . -..|.+-=++++|+|||+.|++|++|.-.+ |+=.|..+
T Consensus 172 ~~~~~~~~~~nd~~~l~~~~~~~~~~iAAvI~EPi~g~~G~i~p~~~yl~~lr~lc~~~gilLI~DEV~T-GfR~g~~~a 250 (425)
T PRK06942 172 VAKHTTVLEYNNVAALEEAFAAFGGEIAAVIVEPVAGNMNLVRGTPEFLNALRALCTKHGAVLIFDEVMC-GFRVALGGA 250 (425)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCC-CCCCCCCHH
T ss_conf 4576646676768889999984389668999556447787502898999999998613783899974625-740676538
Q ss_pred CCCCCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCH--HHC-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Q ss_conf 232200-23567404565225--6744898336205650166--465-43223445566689999999973564899999
Q gi|254780349|r 221 PSPVPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINS--AIF-PGLQGGPFMHSIAAKAVAFGEALSSEFRDYAK 294 (433)
Q Consensus 221 ~~Pl~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~--avf-Pg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~ 294 (433)
+.-+.- .|++|.. |.+.| |-|++ ..++ |+.+.+.. .+| -|+-+|.-+..-||+|+ |....++. ...
T Consensus 251 ~~~~gv~PDi~t~g--K~iggG~Pi~Av-~g~~-eim~~~~~~g~~~h~gTf~gnp~a~AAalat-L~~~~~~~---~~~ 322 (425)
T PRK06942 251 QQHYGITPDLTCLG--KVIGGGMPAAAF-GGRR-DIMAHLAPLGGVYQAGTLSGNPIAVAAGLKT-LRLIQAPG---FYD 322 (425)
T ss_pred HHHHCCCCCEEEEH--HHCCCCCCCEEE-EEHH-HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH-HHHHHCCC---HHH
T ss_conf 76218998799871--005798870210-2599-9997506788872278998787999999999-99984567---999
Q ss_pred HHHHHHHHHHHH----HHHCCCCCCC-C-CCCCCEEEECCCCCCC------CHH---HHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 999888999999----8616852334-5-8889812631665567------679---99998885671880378998999
Q gi|254780349|r 295 QIVLNSQALAKK----LQFLGFDIVS-G-GTDNHLMLVDLRSKRM------TGK---RAESILGRVSITCNKNSIPFDPE 359 (433)
Q Consensus 295 qvv~NA~~La~~----L~~~G~~vv~-g-gTd~H~vlvdl~~~~~------~G~---~a~~~Le~~gI~~Nkn~iP~D~~ 359 (433)
++-+-.+.|.+. +.+.|++... | |.--++.+.|-..... +-. .....|-+.||....
T Consensus 323 ~~~~~g~~L~~gl~~~~~~~g~~~~~~g~gs~f~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gv~~~p-------- 394 (425)
T PRK06942 323 ALAAQTRRLADGLAAEARAAGVPFAADSIGGMFGLYFTERVPTSFAEVTKSDVERFNRFFHLMLDEGVYFAP-------- 394 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCC--------
T ss_conf 999999999999999999779988996537647998689999999999855499999999999978967798--------
Q ss_pred CCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9888985122466673079998999999999999960
Q gi|254780349|r 360 SPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 360 ~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
++..-+ ..+--..++|+++..+-+.+++.
T Consensus 395 -----~~~~~~---f~s~aHt~~did~~l~a~~~a~~ 423 (425)
T PRK06942 395 -----SAYEAG---FVSSTHDDAVLDATLDAARRAFA 423 (425)
T ss_pred -----CCHHCC---CCCCCCCHHHHHHHHHHHHHHHH
T ss_conf -----524217---62303799999999999999997
No 309
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=97.95 E-value=0.0027 Score=43.49 Aligned_cols=287 Identities=16% Similarity=0.145 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHCCCCCEECC-CHHHHHHHHHHHHHH-HCC-CCEEEECCCCCCCCCCCCCC---CCCCC-----------
Q ss_conf 99999999987188630100-001679999999983-154-87488123344841114766---54333-----------
Q gi|254780349|r 81 ENIAIERAKKLFNVNFVNVQ-SHSGSQMNQGVFLAL-MHP-GDSFMGLSLDSGGHLTHGSS---VNMSG----------- 143 (433)
Q Consensus 81 E~la~~~a~~lF~a~~anvq-p~SG~~An~av~~AL-l~p-GD~Il~~~l~~GGHlshg~~---~~~~g----------- 143 (433)
.+| .++..+++..+.--|. .-||+-||-+++..- .-. ..+|+++.-.. ||.. .++++
T Consensus 117 ~~l-A~~L~~~~p~~l~~v~f~~SGSEAvE~AiKlAr~~tgr~kiIs~~~sy-----HG~T~~als~~g~~~~r~~~~pl 190 (460)
T PRK06082 117 IEC-AEKLTEICGGELNRVLFAPGGTSVIGMALKLARHITGNYKVVSLWDSF-----HGASLDAISVGGEACFRQGMGPL 190 (460)
T ss_pred HHH-HHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCC-----CCCCHHHHHCCCCHHHCCCCCCC
T ss_conf 999-999998578776979843965899999999998852886489960786-----77626665504954333688898
Q ss_pred -CCCCCCCCCCCC-----CCCCCC---HHHHHHHHHHHC-CCEEEE----ECCC-CCCCCCHHHHHHHHHHCCCEEEECC
Q ss_conf -332201366583-----235659---899999998604-667897----0552-4353637999988641797899186
Q gi|254780349|r 144 -KWFKAIPYNVRK-----EDGLLD---MHEIESLAIEYN-PKLIIV----GGTA-YSRVWDWERFRSIADSIGAYLMADI 208 (433)
Q Consensus 144 -~~~~~~~y~~d~-----~~~~ID---~d~~~~~a~~~k-PklIi~----G~S~-y~~~~d~~~l~eIa~~~ga~l~~D~ 208 (433)
..+..++++... ....-| .|.++..++... ..-+|+ |... .|-+-=++++|++|++.|.+|++|.
T Consensus 191 ~~g~~~vp~p~~~~~~~~~~~~~~~~~~~~le~~ie~~g~iAA~i~EPi~~~g~~~P~~~yl~~lr~lc~~~giLlI~DE 270 (460)
T PRK06082 191 MAGVERIPPAVSYRGAFPRADGSDVHYADYLEYVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRIREICDKHNVLLIIDD 270 (460)
T ss_pred CCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCC
T ss_conf 99975479863236666764311289999999986057978999961666788806898999999999997298576033
Q ss_pred CCHHHHH-HHHCCCC-CCCC-CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2012443-2000123-2200-23567404565225---674489833620565016646543223445566689999999
Q gi|254780349|r 209 SHISGLV-VGGQHPS-PVPH-CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFG 282 (433)
Q Consensus 209 aH~~GLI-a~g~~~~-Pl~~-ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~ 282 (433)
-++ |+= .|..|-. -..- .|+||.+ |.|.| |-++++ +++ ++.+.......-.+.+|.-+..-||+|+ .
T Consensus 271 Vqt-GfGRTG~~fa~e~~gv~PDIv~~g--KglggG~~Pisav~-~~~-~~~~~~~~~~g~~T~~gnPl~cAaAlA~--L 343 (460)
T PRK06082 271 IPN-GMGRSGEWFTHQAFDIEPDILCIG--KGLGGGLVPIAAMI-TKD-KYNTAAQISLGHYTHEKSPIGCAAALAT--M 343 (460)
T ss_pred CCC-CCCCCCCHHHHHCCCCCCCEEEEC--HHHHCCCCCEEEEE-EHH-HHHHHCCCCCCCCCCCCCHHHHHHHHHH--H
T ss_conf 202-887544344663179998289988--16438977638998-748-8552015776543678987999999999--9
Q ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCEEE-ECCC-C---CCCC---HHHHHHHHHHCCEEEECC
Q ss_conf 9735648999999998889999998616--852334588898126-3166-5---5676---799999888567188037
Q gi|254780349|r 283 EALSSEFRDYAKQIVLNSQALAKKLQFL--GFDIVSGGTDNHLML-VDLR-S---KRMT---GKRAESILGRVSITCNKN 352 (433)
Q Consensus 283 Ea~~~~f~~Ya~qvv~NA~~La~~L~~~--G~~vv~ggTd~H~vl-vdl~-~---~~~~---G~~a~~~Le~~gI~~Nkn 352 (433)
+.++.+ .+.+++-+..+.|.+.|.+. .+++|..---.-+++ |++- + +.-. .......+-+.|+.+..
T Consensus 344 ~iie~e--~l~~~a~~~G~~l~~~L~~L~~~~p~VgdVRG~GLm~giElv~d~~tk~~~~~~a~~v~~~~~~~Gl~~~~- 420 (460)
T PRK06082 344 EAIEQE--GLLDKVKADSQFMREKLLEMKAKYPVIGDVRGIGLLWGIELVTDHETKTRAYDEAEAVLYQCLNNGLSFKV- 420 (460)
T ss_pred HHHHHC--CHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEC-
T ss_conf 999725--78899999999999999999862997885233654999997417765656679999999999968917910-
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 89989999888985122466673079998999999999999960
Q gi|254780349|r 353 SIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 353 ~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
| ..+-|||--|-+ +.++|++++.+.+.++|.
T Consensus 421 --~-------~gnvirl~PPL~----It~~eid~~l~~l~~al~ 451 (460)
T PRK06082 421 --S-------QGNVIQLSPPLI----ISREQLTEALAIFEEAIA 451 (460)
T ss_pred --C-------CCCEEEEECCCC----CCHHHHHHHHHHHHHHHH
T ss_conf --8-------999899979911----899999999999999999
No 310
>PRK03715 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional
Probab=97.95 E-value=0.0027 Score=43.45 Aligned_cols=262 Identities=18% Similarity=0.226 Sum_probs=120.9
Q ss_pred CHHHHHHHHHHHHHHH------CCC-CEEEECCCCCCCCCCCCCCCCCCCCC-CCCCCCCCC---CCCCCCCHHHHHHHH
Q ss_conf 0016799999999831------548-74881233448411147665433333-220136658---323565989999999
Q gi|254780349|r 101 SHSGSQMNQGVFLALM------HPG-DSFMGLSLDSGGHLTHGSSVNMSGKW-FKAIPYNVR---KEDGLLDMHEIESLA 169 (433)
Q Consensus 101 p~SG~~An~av~~ALl------~pG-D~Il~~~l~~GGHlshg~~~~~~g~~-~~~~~y~~d---~~~~~ID~d~~~~~a 169 (433)
.-||+-||.+++...- ++| .+|+++.-..-|+. . ...+++|.- ++...-+.- +....=|.+.+++++
T Consensus 99 ~~sGsEAvE~AlKlAr~y~~~~~~gr~~ii~~~~~yHG~T-~-~~~s~sg~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~ 176 (395)
T PRK03715 99 ANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRT-L-ATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLI 176 (395)
T ss_pred ECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC-H-HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
T ss_conf 1875889999999999986246899845999757889874-0-2210468644455678988996755545589999734
Q ss_pred HHHCCCE--EEE----ECCC-C-CCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCCC-CCC-CCEEEECCCCCC
Q ss_conf 8604667--897----0552-4-353637999988641797899186201244-320001232-200-235674045652
Q gi|254780349|r 170 IEYNPKL--IIV----GGTA-Y-SRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPSP-VPH-CHIVTTTTHKSL 238 (433)
Q Consensus 170 ~~~kPkl--Ii~----G~S~-y-~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~P-l~~-ADvvt~sTHKtl 238 (433)
.+++ ||+ |... + +-+-=++++|++|+++|++|++|.-++ |+ -.|..|-.- +.- .|+|+.+ |.|
T Consensus 177 ---~~~~aAviiEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~fa~e~~gv~PDiv~~g--Kgl 250 (395)
T PRK03715 177 ---TDKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-GCGRTGTLFAYELAGIEPDIMTLG--KGI 250 (395)
T ss_pred ---CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCC-CCCCCCCCCCCCCCCCCCCEEEEC--CHH
T ss_conf ---99807999937888779852988999999999951897356201103-888666853000489999989975--244
Q ss_pred CC--CCCEEEEECCCCHHHHCCHHHCHHHH----HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--
Q ss_conf 25--67448983362056501664654322----34455666899999999735648999999998889999998616--
Q gi|254780349|r 239 RG--PRGGLIMTNHADLAKKINSAIFPGLQ----GGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-- 310 (433)
Q Consensus 239 ~G--PrgGiI~~~~~e~~~~i~~avfPg~q----g~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-- 310 (433)
.| |-|+++.. + ++.. ..|+.+ +|.-+...||+++ .+.++. ..+..++.+....|.+.|.+.
T Consensus 251 ~gG~Pl~av~~~-~-~i~~-----~~~g~~g~T~~gnpla~aaa~a~--L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~ 319 (395)
T PRK03715 251 GGGVPLAALLAK-A-EVAV-----FEAGDQGGTYNGNPLMTAVGYAV--ISQLVA--PGFLEGVRARGEYLKEKLLELSA 319 (395)
T ss_pred HCCCCEEEEEEC-H-HHCC-----CCCCCCCCCCCCCHHHHHHHHHH--HHHHHC--CCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 289852899982-6-7424-----77898887989971899999999--999962--68999999999999999998650
Q ss_pred CCCCCCCCCCCCEEE-ECCCCCCCCHHHH--HHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHH
Q ss_conf 852334588898126-3166556767999--9988856718803789989999888985122466673079998999999
Q gi|254780349|r 311 GFDIVSGGTDNHLML-VDLRSKRMTGKRA--ESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYI 387 (433)
Q Consensus 311 G~~vv~ggTd~H~vl-vdl~~~~~~G~~a--~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~i 387 (433)
-+.|. +-----+++ +++.. ....... ...+...|++++. |. +.-||+- |.+| +.++|+.++
T Consensus 320 ~~~i~-~vRG~Gl~~~iel~~-~~~~~~~~~~~~~~~~gll~~~---~~-------~n~irl~-PpL~---it~~eid~~ 383 (395)
T PRK03715 320 ERGLE-GERGEGLLRALLLGK-DIGPQIVEKARDMQPDGLLLNA---PR-------PNLLRFM-PALN---VTTDEIDQM 383 (395)
T ss_pred CCCCE-EEEECCEEEEEEECC-CCCHHHHHHHHHHHHCCEEEEC---CC-------CCEEEEE-CCCC---CCHHHHHHH
T ss_conf 39913-574355899999678-8708999999999839989922---89-------9989997-9943---889999999
Q ss_pred HHHHHHHHHC
Q ss_conf 9999999602
Q gi|254780349|r 388 GELIAQILDG 397 (433)
Q Consensus 388 A~li~~~L~~ 397 (433)
-+.+.++|+.
T Consensus 384 ~~~l~~aL~~ 393 (395)
T PRK03715 384 IAMLRSVLDK 393 (395)
T ss_pred HHHHHHHHHH
T ss_conf 9999999998
No 311
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=97.93 E-value=0.0029 Score=43.24 Aligned_cols=180 Identities=20% Similarity=0.226 Sum_probs=90.4
Q ss_pred CCCHHHHHHHHHHCCCEEEECCCCHHHHHH-HHCCCCC-CCC-CCEEEECCCCCCCCCCCEEEEECCCCHHHHCCHHHC-
Q ss_conf 363799998864179789918620124432-0001232-200-235674045652256744898336205650166465-
Q gi|254780349|r 187 VWDWERFRSIADSIGAYLMADISHISGLVV-GGQHPSP-VPH-CHIVTTTTHKSLRGPRGGLIMTNHADLAKKINSAIF- 262 (433)
Q Consensus 187 ~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa-~g~~~~P-l~~-ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~avf- 262 (433)
+-=++++|+||+++|.+|++|.-++ |+=- |..|-.- +.- .|+||. -|.+. -||++... .+.+..+ .+|
T Consensus 238 ~~yl~~lr~lc~~~giLLI~DEVqt-GfGRtG~~fa~e~~gv~PDiv~~--gKgl~--~g~~~~~~--~~~~~~~-~~~~ 309 (431)
T TIGR03251 238 PEFLRAMRALCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVQPDIVAF--GKKTQ--VCGIMAGR--RVDEVAD-NVFA 309 (431)
T ss_pred HHHHHHHHHHHHHCCCEEECCCCEE-CCCCCCCCHHHHHCCCCCCEEEE--CCCCC--CCHHHHHH--HHHHHHH-HHHC
T ss_conf 8999999999876275055341013-67766774467750788998987--77223--55188899--9999999-8641
Q ss_pred -HH----HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--CC-CCCCCCCCCCEEE-ECCCCCCC
Q ss_conf -43----2234455666899999999735648999999998889999998616--85-2334588898126-31665567
Q gi|254780349|r 263 -PG----LQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL--GF-DIVSGGTDNHLML-VDLRSKRM 333 (433)
Q Consensus 263 -Pg----~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~--G~-~vv~ggTd~H~vl-vdl~~~~~ 333 (433)
|+ +-+|.-+...||+++ .+.++.+ ...+++-+....|.+.|.+. -+ ++|..---.-+++ +++.....
T Consensus 310 ~~~~~~sT~~gnpla~aaala~--l~ii~~e--~l~~~v~~~g~~l~~~L~~l~~~~p~~V~dVRG~GLm~giel~~~~~ 385 (431)
T TIGR03251 310 VPSRLNSTWGGNLVDMVRATRI--LEIIEEE--RLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTAD 385 (431)
T ss_pred CCCCCCCCCCCCHHHHHHHHHH--HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCHHH
T ss_conf 7877678888898999999988--9998624--69999999999999999999876878245630133699998188167
Q ss_pred CHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 679999988856718803789989999888985122466673079998999999999999
Q gi|254780349|r 334 TGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQ 393 (433)
Q Consensus 334 ~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~ 393 (433)
..+..+.+-+.|+++... -.++||+. |.+| +.++|++++-+.+.+
T Consensus 386 -~~~~~~~~~~~Gll~~~~----------g~~~ir~~-PPL~---it~~eid~~~~~l~~ 430 (431)
T TIGR03251 386 -RDEVIRQLYREGVLLLGC----------GERSIRFR-PPLT---VTREEIDAAIDAIRR 430 (431)
T ss_pred -HHHHHHHHHHCCCEEEEC----------CCCEEEEE-CCCC---CCHHHHHHHHHHHCC
T ss_conf -999999999789399747----------99989998-8930---889999999999726
No 312
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase; InterPro: IPR006233 Cystathionine beta-lyase (alternate name: beta-cystathionase) is one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys .; GO: 0004121 cystathionine beta-lyase activity, 0006520 amino acid metabolic process, 0005737 cytoplasm.
Probab=97.92 E-value=9.8e-05 Score=53.50 Aligned_cols=179 Identities=16% Similarity=0.169 Sum_probs=119.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 75336006799999999999998718863010000167999999998315487488123344841114766543333322
Q gi|254780349|r 68 KRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFK 147 (433)
Q Consensus 68 ~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~ 147 (433)
.+|.=|..-.-.--.| ++..++|=|+--+-.-| ||..|-+..++|+++-||.||..+-.. |-|.----.+.+|+--
T Consensus 45 ~~ltYG~rGt~T~~AL-q~a~~elEG~ag~~lyP-sGlAAvT~~~LafvkaGDhvL~vdsaY--~PTr~Fcd~vLkr~gv 120 (389)
T TIGR01324 45 DKLTYGIRGTLTTVAL-QDALAELEGAAGVILYP-SGLAAVTNALLAFVKAGDHVLVVDSAY--KPTRRFCDIVLKRLGV 120 (389)
T ss_pred CCEECCCCCCCHHHHH-HHHHHHHCCCCCEEEEC-CCHHHHHHHHHHHHHCCCEEEEECCCC--CHHHHHHHHHHHHHCE
T ss_conf 7410134687538899-99999724777607624-755788899998874388379864646--1158999887536344
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC-CCCCCC-CCHHHHHHHHH--HCCCEEEECCCCHHHHHHHHCCCCC
Q ss_conf 0136658323565989999999860466789705-524353-63799998864--1797899186201244320001232
Q gi|254780349|r 148 AIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGG-TAYSRV-WDWERFRSIAD--SIGAYLMADISHISGLVVGGQHPSP 223 (433)
Q Consensus 148 ~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~-S~y~~~-~d~~~l~eIa~--~~ga~l~~D~aH~~GLIa~g~~~~P 223 (433)
.+.| .||. |-.+.+..+++-. .|+|++.+ |+..|. -|+..|.+.|+ ..|+++|.|..=. +|++=.|
T Consensus 121 ~~~Y-YDP~---igPe~ia~Li~pn-Tkv~flEaP~S~TfE~qDIPaIakaA~kv~~g~~~miDNTWa-----agllFkp 190 (389)
T TIGR01324 121 EVEY-YDPK---IGPEDIAALIKPN-TKVVFLEAPASLTFEVQDIPAIAKAARKVAAGVVVMIDNTWA-----AGLLFKP 190 (389)
T ss_pred EEEE-ECCC---CCHHHHHHHCCCC-CEEEEEECCCCCEECCCCHHHHHHHHHHCCCCEEEEEECCCC-----CHHHCCC
T ss_conf 5887-2788---6888898740888-448998378745103588468999986418982999636302-----0010230
Q ss_pred CCC-CCEEEECCCCCCCCCCCEEE----EECCCCHHHHCC-HHHC
Q ss_conf 200-23567404565225674489----833620565016-6465
Q gi|254780349|r 224 VPH-CHIVTTTTHKSLRGPRGGLI----MTNHADLAKKIN-SAIF 262 (433)
Q Consensus 224 l~~-ADvvt~sTHKtl~GPrgGiI----~~~~~e~~~~i~-~avf 262 (433)
|+| .|+=---..|.+.|- +=+. .+|+ +-++++- .+.+
T Consensus 191 L~HgvdiSiqA~TKY~~GH-SD~~~Gtv~an~-~~w~qL~Ge~~~ 233 (389)
T TIGR01324 191 LEHGVDISIQAATKYLAGH-SDVLLGTVAANE-DAWEQLLGEASY 233 (389)
T ss_pred CCCCCCEEEEECCCCCCCC-CHHHHHHHHHHH-HHHHHHCCHHHH
T ss_conf 0178636875033557550-024563477557-899875120244
No 313
>TIGR01264 tyr_amTase_E tyrosine aminotransferase; InterPro: IPR005957 This entry describes tyrosine aminotransferase (2.6.1.5 from EC) as found in animals and Trypanosoma cruzi (Euglenozoa). It is the first enzyme of a pathway of tyrosine degradation via homogentisate. L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate.; GO: 0004838 tyrosine transaminase activity, 0030170 pyridoxal phosphate binding, 0009072 aromatic amino acid family metabolic process.
Probab=97.88 E-value=0.0036 Score=42.58 Aligned_cols=317 Identities=20% Similarity=0.187 Sum_probs=193.5
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCC--CCCCCCCCCCCCCHHHHHHHHHH------HHHHHHHCCCCCEECCCHHHHHHH
Q ss_conf 8104301029899998305102886--57988875336006799999999------999998718863010000167999
Q gi|254780349|r 37 QLIASENIVSRAVLEAQGSILTNKY--AEGYPSKRYYGGCQYVDDIENIA------IERAKKLFNVNFVNVQSHSGSQMN 108 (433)
Q Consensus 37 ~LiASEN~~S~~v~~~l~S~l~nky--aeG~pg~ryy~G~~~~d~iE~la------~~~a~~lF~a~~anvqp~SG~~An 108 (433)
||-+++..+ .++++++.|-.-|=| +-|++-.| + .|=..= .+|++.-|.++-+-.=+ .||+|-
T Consensus 47 nL~~~~~~~-~a~~~~v~S~~ynGY~p~vG~~~Ar-----~---aia~~y~~sfvhn~~~~~~~~a~~Vvl~S-GCS~Al 116 (415)
T TIGR01264 47 NLPTSEEAM-QAMKESVDSGKYNGYAPTVGALEAR-----E---AIAEYYRNSFVHNKRPDGSIEADDVVLCS-GCSHAL 116 (415)
T ss_pred CCCCCHHHH-HHHHHHHCCCCCCCCCCCCCHHHHH-----H---HHHHHHHHHHHCCCCCCCCCCCCCEEECC-CCHHHH
T ss_conf 998888999-9999875256606772001348888-----9---99998763110023668720127647716-702789
Q ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHCCCEEEEE------
Q ss_conf 9999983154874881233448411147665433333220136658--32356598999999986046678970------
Q gi|254780349|r 109 QGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVR--KEDGLLDMHEIESLAIEYNPKLIIVG------ 180 (433)
Q Consensus 109 ~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d--~~~~~ID~d~~~~~a~~~kPklIi~G------ 180 (433)
..++.||..+||-||++....-=+-| -+.+...+...|.+| .++.+||+++++.+++ .|.|+||+-
T Consensus 117 ~~ai~a~Ad~G~nvLVP~PGFplY~T-----lc~~~~i~~~~Y~~d~~d~~w~~DL~~l~~LiD-d~T~~l~vnNPSNPc 190 (415)
T TIGR01264 117 EMAIEALADAGQNVLVPRPGFPLYET-----LCKALGIEVKLYNLDLPDEDWEIDLKQLESLID-DKTKALIVNNPSNPC 190 (415)
T ss_pred HHHHHHHCCCCCEEECCCCCCCHHHH-----HHHHCCCCCCEECCCCCCCHHHHHHHHHHHHCC-CCCCEEEEECCCCCC
T ss_conf 99999953797806307888720788-----640147620000257987335664898863125-674078883757788
Q ss_pred CCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCC-C-CCCC-------EEEECCCCCC--CCCC-CEEEEE
Q ss_conf 5524353637999988641797899186201244320001232-2-0023-------5674045652--2567-448983
Q gi|254780349|r 181 GTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSP-V-PHCH-------IVTTTTHKSL--RGPR-GGLIMT 248 (433)
Q Consensus 181 ~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~P-l-~~AD-------vvt~sTHKtl--~GPr-gGiI~~ 248 (433)
+|+|.|.+ +++|-.+|++.--.+++|.= +.+||--|.=||- | +-|+ +..+.+-|-| ||=| |=||.-
T Consensus 191 GSvF~~~H-l~~l~a~A~~~~Lpi~ADEI-Y~~~VF~GkDPnatF~~lA~L~s~VP~~~cgG~AKr~lVPGWRLGWli~h 268 (415)
T TIGR01264 191 GSVFRREH-LEELLALAERLKLPIIADEI-YGDMVFKGKDPNATFTPLASLSSKVPILSCGGLAKRWLVPGWRLGWLIIH 268 (415)
T ss_pred CCCCCHHH-HHHHHHHHHHCCCCEEEEEE-CCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCEEEE
T ss_conf 98878788-99999998753872366420-25651388678642202023779988687076320022476110247888
Q ss_pred CCCCHHHH-CCHHHC--HHHHHHHHHHHHH--HHHHHHHHHHCHHHHHHHHHHH-HHHHHHHHHHHHC-CCCCCC-CCCC
Q ss_conf 36205650-166465--4322344556668--9999999973564899999999-8889999998616-852334-5888
Q gi|254780349|r 249 NHADLAKK-INSAIF--PGLQGGPFMHSIA--AKAVAFGEALSSEFRDYAKQIV-LNSQALAKKLQFL-GFDIVS-GGTD 320 (433)
Q Consensus 249 ~~~e~~~~-i~~avf--Pg~qg~~~~~~ia--a~aval~Ea~~~~f~~Ya~qvv-~NA~~La~~L~~~-G~~vv~-ggTd 320 (433)
+..+.... +..++- =+..-| .++|+ |+--.|.+.=+ +|-.|.-.++ .||..+-+.|.+- |+.++- .|.-
T Consensus 269 d~~~~~~~e~~~GL~~ls~~i~G--pntlvQGAl~~iL~~TPq-~Yf~~~~~~l~~nA~~~y~~La~v~Gl~pv~P~GaM 345 (415)
T TIGR01264 269 DRKGVLRDEVKDGLKKLSQRILG--PNTLVQGALPEILLKTPQ-EYFDGTVSVLESNAMLVYEILAEVPGLRPVMPKGAM 345 (415)
T ss_pred CCCCCCCHHHHHHHHHHHCHHCC--CCHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCE
T ss_conf 78886502688999997230046--201144217988640655-677899999874089999885106886111488755
Q ss_pred CCEEEECCCCCC---CCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHH
Q ss_conf 981263166556---767999998885671880378998999988898512246667307999899999
Q gi|254780349|r 321 NHLMLVDLRSKR---MTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEY 386 (433)
Q Consensus 321 ~H~vlvdl~~~~---~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~ 386 (433)
==++=|.+..++ -|-.-.|+.+++-++-| +|+. -...|.-+|+= +|++- ..|+|
T Consensus 346 Y~m~~i~~e~F~e~k~Dv~F~~~L~~E~sV~c----LPG~--~F~~PGf~Rvv----~T~P~--~~~~E 402 (415)
T TIGR01264 346 YMMVGIELEKFPEFKSDVEFVEKLVEEESVFC----LPGS--CFEYPGFFRVV----LTVPS--SMMEE 402 (415)
T ss_pred EEEEEEECCCCCCCCCHHHHHHHHHHHCCCEE----CCHH--HHCCCCCEEEE----EECCH--HHHHH
T ss_conf 87560020017772411799999851146304----6416--44589958999----70780--67899
No 314
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=97.86 E-value=0.0039 Score=42.37 Aligned_cols=318 Identities=15% Similarity=0.161 Sum_probs=163.2
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCCC-----CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC--CEECCC-HHHHHHHH
Q ss_conf 104301029899998305102886-----5798887533600679999999999999871886--301000-01679999
Q gi|254780349|r 38 LIASENIVSRAVLEAQGSILTNKY-----AEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVN--FVNVQS-HSGSQMNQ 109 (433)
Q Consensus 38 LiASEN~~S~~v~~~l~S~l~nky-----aeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~--~anvqp-~SG~~An~ 109 (433)
.-|.--.+++.|++.....|-|-- ..+..++ ...+.++-.-++++.++||+.. |.-+=. -+++...-
T Consensus 3 F~aGPa~lp~~Vl~~~~~e~~~~~~~G~sile~SHR-----s~~f~~i~~~a~~~lr~Ll~iPd~Y~Vlfl~GGat~qf~ 77 (355)
T cd00611 3 FSAGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHR-----SKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFA 77 (355)
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCC-----CHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH
T ss_conf 788876589999999999975426886015512668-----878999999999999998489998089995784499999
Q ss_pred HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCC-C--CCCCHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 999983154874881233448411147665433333220-13665832-3--5659899999998604667897055243
Q gi|254780349|r 110 GVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKA-IPYNVRKE-D--GLLDMHEIESLAIEYNPKLIIVGGTAYS 185 (433)
Q Consensus 110 av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~-~~y~~d~~-~--~~ID~d~~~~~a~~~kPklIi~G~S~y~ 185 (433)
++-+.|+.++++.--+. -|+.|.... .-..++... .-....++ + ...|.+... .......+.+-.-...
T Consensus 78 ~ip~Nll~~~~~a~y~~---tG~ws~ka~-~eA~~~~~~~~i~~~~~~~~~~~iP~~~~~~---~~~~~~yvh~t~NETi 150 (355)
T cd00611 78 AVPLNLLGDKGTADYVV---TGAWSAKAA-KEAKRYGGVVVIVAAKEEGKYTKIPDVETWD---LAPDAAYVHYCSNETI 150 (355)
T ss_pred HHHHHHCCCCCCEEEEE---ECCHHHHHH-HHHHHHCCCCCCCCCCCCCCCCCCCCHHHCC---CCCCCCEEEEEECCCC
T ss_conf 99985147887058997---372689999-9998746774103665667877689934327---8887777999325775
Q ss_pred CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCCCCCCCE-EEEECCCCHHHHCCHHHC
Q ss_conf 53637999988641797899186201244320001232200--235674045652256744-898336205650166465
Q gi|254780349|r 186 RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSLRGPRGG-LIMTNHADLAKKINSAIF 262 (433)
Q Consensus 186 ~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl~GPrgG-iI~~~~~e~~~~i~~avf 262 (433)
.=.. +.++.+..+..|++|++-- .+--|++. .|+++.+-.|.| ||.|. +++-|+ ++-++.++.+
T Consensus 151 ~Gv~---~~~~p~~~~~~lV~D~SS~-------~~s~~iD~~~~d~iYagaQKnl-GpaG~tvvIir~-~ll~~~~~~~- 217 (355)
T cd00611 151 HGVE---FDEVPDTGGVPLVADMSSN-------ILSRPIDVSKFGVIYAGAQKNL-GPAGVTVVIVRK-DLLGKARKIT- 217 (355)
T ss_pred CCEE---CCCCCCCCCCCEEEEECCH-------HCCCCCCHHHCCEEEEECCCCC-CCCCEEEEEECH-HHHHHCCCCC-
T ss_conf 3434---4656677896278750205-------4086767789218998710015-666508999849-9971024469-
Q ss_pred HHHHH------------HHHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHC-CCCC--CCCCCCCCE-EE
Q ss_conf 43223------------4455666899999999735648-999999998889999998616-8523--345888981-26
Q gi|254780349|r 263 PGLQG------------GPFMHSIAAKAVAFGEALSSEF-RDYAKQIVLNSQALAKKLQFL-GFDI--VSGGTDNHL-ML 325 (433)
Q Consensus 263 Pg~qg------------~~~~~~iaa~aval~Ea~~~~f-~~Ya~qvv~NA~~La~~L~~~-G~~v--v~ggTd~H~-vl 325 (433)
|.+.. .|-.-.|--....|+-.....+ ..-.++..+.|+.|-..+.+. +|-. +.--..+.+ |.
T Consensus 218 P~~l~y~~~~~~~s~~NTPp~f~iy~~~lv~~Wl~~~GGl~~~~~~n~~kA~~LY~~iD~s~~~y~~~v~~~~RS~mnv~ 297 (355)
T cd00611 218 PSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVP 297 (355)
T ss_pred CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHCCCCEEE
T ss_conf 73200999985255557962799999999999988768999999999999999999998588801178982335877589
Q ss_pred ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 31665567679999988856718803789989999888985122466673079998999999999999
Q gi|254780349|r 326 VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQ 393 (433)
Q Consensus 326 vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~ 393 (433)
.++.+..++. .+-+.+++.||.-=| + .|+- .|||++.- -.|..++++.+.++|.+
T Consensus 298 f~~~~~~l~~-~Fl~~a~~~Gl~~lk----G-hRsv---Gg~RaS~y----nA~~~e~V~aL~~fm~~ 352 (355)
T cd00611 298 FRLGKEELEK-EFLKEAEAAGMIGLK----G-HRSV---GGIRASIY----NALSLEGVQALADFMKE 352 (355)
T ss_pred EEECCHHHHH-HHHHHHHHCCCCCCC----C-CCCC---CCEEEEEE----CCCCHHHHHHHHHHHHH
T ss_conf 9858878899-999999987882556----8-7522---35278850----89899999999999999
No 315
>KOG0259 consensus
Probab=97.82 E-value=0.0014 Score=45.55 Aligned_cols=295 Identities=19% Similarity=0.177 Sum_probs=150.4
Q ss_pred HHHHHHHHCCCCCCCCC--CCCCCCCCCCCHHHHHHHHHHHH---HHHHHCCCCCEECCCHHH-HHHHHHHHHHHHCCCC
Q ss_conf 89999830510288657--98887533600679999999999---999871886301000016-7999999998315487
Q gi|254780349|r 47 RAVLEAQGSILTNKYAE--GYPSKRYYGGCQYVDDIENIAIE---RAKKLFNVNFVNVQSHSG-SQMNQGVFLALMHPGD 120 (433)
Q Consensus 47 ~~v~~~l~S~l~nkyae--G~pg~ryy~G~~~~d~iE~la~~---~a~~lF~a~~anvqp~SG-~~An~av~~ALl~pGD 120 (433)
.+|..++.|-..|-|+- |.+-.| +..|.- ..-.-+.+ -+|-..|| ++|-..++.+|.+||.
T Consensus 85 ~Av~~al~Sgk~N~Yaps~G~~~AR-----------~AVAeYl~~~l~~kl~a--~DV~ltsGC~qAIe~~i~~LA~p~a 151 (447)
T KOG0259 85 QAVVDALRSGKGNGYAPSVGILPAR-----------RAVAEYLNRDLPNKLTA--DDVVLTSGCSQAIELAISSLANPGA 151 (447)
T ss_pred HHHHHHHHCCCCCCCCCCCCCHHHH-----------HHHHHHHHCCCCCCCCC--CCEEEECCCHHHHHHHHHHHCCCCC
T ss_conf 9999999638877768765648899-----------99999863189875674--7669955636999999997438998
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHCCCEEEEE-----CCCCCCCCCHHHHH
Q ss_conf 4881233448411147665433333220136658323-56598999999986046678970-----55243536379999
Q gi|254780349|r 121 SFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-GLLDMHEIESLAIEYNPKLIIVG-----GTAYSRVWDWERFR 194 (433)
Q Consensus 121 ~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~~ID~d~~~~~a~~~kPklIi~G-----~S~y~~~~d~~~l~ 194 (433)
.||.+....-=..++. .....++..|++-++. .+||++.+|.++.+..-.|||.. +++|+..+ ++++.
T Consensus 152 NILlPrPGfp~Y~~~a-----~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~H-L~kia 225 (447)
T KOG0259 152 NILLPRPGFPLYDTRA-----IYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDH-LKKIA 225 (447)
T ss_pred CEECCCCCCCHHHHHH-----HHCCCEEEEECCCCCCCCEECHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHH-HHHHH
T ss_conf 6654799984688766-----32584367632567656153168899764467069999679999865151999-99999
Q ss_pred HHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-C---CEE-EECCCCCC--CCCCCEEEEECCCC-HHH---HCCHHHCH
Q ss_conf 88641797899186201244320001232200-2---356-74045652--25674489833620-565---01664654
Q gi|254780349|r 195 SIADSIGAYLMADISHISGLVVGGQHPSPVPH-C---HIV-TTTTHKSL--RGPRGGLIMTNHAD-LAK---KINSAIFP 263 (433)
Q Consensus 195 eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-A---Dvv-t~sTHKtl--~GPrgGiI~~~~~e-~~~---~i~~avfP 263 (433)
++|++.|..++.|.- +--+|-|+.===|+.. + -|+ .++--|-. ||=|=|-|..+|.. ..+ .++ ++--
T Consensus 226 e~A~klgi~vIaDEV-Y~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q-~~~~ 303 (447)
T KOG0259 226 ETAKKLGIMVIADEV-YGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQ-GIKN 303 (447)
T ss_pred HHHHHHCCEEEEHHH-CCEEECCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHH-HHHH
T ss_conf 999984976976111-23133179973001330565736861542356404773034689756665424418999-9999
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHCHHHHHHHHHHH-HHHHHHHHHHHHC-CCCCCCCCCC-CCEEEECC--C---CCCC
Q ss_conf 32234455666--89999999973564899999999-8889999998616-8523345888-98126316--6---5567
Q gi|254780349|r 264 GLQGGPFMHSI--AAKAVAFGEALSSEFRDYAKQIV-LNSQALAKKLQFL-GFDIVSGGTD-NHLMLVDL--R---SKRM 333 (433)
Q Consensus 264 g~qg~~~~~~i--aa~aval~Ea~~~~f~~Ya~qvv-~NA~~La~~L~~~-G~~vv~ggTd-~H~vlvdl--~---~~~~ 333 (433)
.+|-.+...+| +|+---|.+.-+ +|-++...++ .||..-.+.|.+- |+.-. -.-+ +--+|+.+ . ...-
T Consensus 304 ~~~~~~~p~TiiQ~AlP~IL~kTp~-efF~k~~~~lk~na~l~y~~Lk~IP~l~cp-~kPeg~mylmv~l~~s~~~~~~d 381 (447)
T KOG0259 304 FLDIIPGPATIIQGALPDILEKTPE-EFFDKKLSFLKSNADLCYSRLKDIPCLTCP-VKPEGCMYLMVKLNLSLFPDIED 381 (447)
T ss_pred HHHCCCCCCHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCCEEEEECCCHHHHCCCCC
T ss_conf 9854599508598775889874839-999999999876279999998459876667-58875158985266654002245
Q ss_pred CHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 6799999888567188037899899998889851224
Q gi|254780349|r 334 TGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLG 370 (433)
Q Consensus 334 ~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlG 370 (433)
|-.-.++.-.+-+.+| +||.- -..+.=+|+-
T Consensus 382 D~dFc~kL~~Eesv~~----LPG~a--f~~~nw~Ri~ 412 (447)
T KOG0259 382 DVDFCQKLAREESVIC----LPGQA--FGLKNWLRIV 412 (447)
T ss_pred CHHHHHHHHHHCCEEE----ECCCC--CCCCCEEEEE
T ss_conf 0899999863142687----25120--3678848999
No 316
>KOG1411 consensus
Probab=97.81 E-value=0.0012 Score=45.97 Aligned_cols=318 Identities=19% Similarity=0.210 Sum_probs=196.4
Q ss_pred CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC--------CCEECCCHHHHHHH--HHHH
Q ss_conf 1029899998305102886579888753360067999999999999987188--------63010000167999--9999
Q gi|254780349|r 43 NIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNV--------NFVNVQSHSGSQMN--QGVF 112 (433)
Q Consensus 43 N~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a--------~~anvqp~SG~~An--~av~ 112 (433)
-++=|.|++|..-... +- -.+.|....-+-+. +..-++-+||. +.+-||.+||+-|- -+-|
T Consensus 69 p~vL~~VrkAE~ql~~-~~-----ldKEYlpI~Gl~eF---~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~F 139 (427)
T KOG1411 69 PYVLPSVRKAEQQLAS-LS-----LDKEYLPITGLAEF---NKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEF 139 (427)
T ss_pred EEEEHHHHHHHHHHHH-HC-----CCCHHCCCCCHHHH---HHHHHHHHHCCCCHHHHCCCEEEEEECCCCCHHHHHHHH
T ss_conf 4541788899998753-11-----35012024561888---888788761588544420532688740575326677899
Q ss_pred HHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC-EEEEEC-C-----CCC
Q ss_conf 983154874881233448411147665433333220136658323565989999999860466-789705-5-----243
Q gi|254780349|r 113 LALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPK-LIIVGG-T-----AYS 185 (433)
Q Consensus 113 ~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPk-lIi~G~-S-----~y~ 185 (433)
.+.--|+.+|...+..-|-| ..-....|.-...+.| .|+++..+|++.+-+.+.+.-+. .|++-+ - +=|
T Consensus 140 l~~f~~~~~I~ip~PTWgNh---~~if~~ag~~~~~yrY-yd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDP 215 (427)
T KOG1411 140 LARFYPSRDIYIPDPTWGNH---KNIFKDAGLPVKFYRY-YDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDP 215 (427)
T ss_pred HHHHCCCCCEEECCCCCCCC---CCCCCCCCCCEEEEEE-CCCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCC
T ss_conf 98626666156158753456---7630025861256663-0541001356778998741788848985221038878896
Q ss_pred CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCC--CCC--C---C-EEEECCCCCC--CCCC-CEE-EEECCCCH
Q ss_conf 53637999988641797899186201244320001232--200--2---3-5674045652--2567-448-98336205
Q gi|254780349|r 186 RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSP--VPH--C---H-IVTTTTHKSL--RGPR-GGL-IMTNHADL 253 (433)
Q Consensus 186 ~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~P--l~~--A---D-vvt~sTHKtl--~GPr-gGi-I~~~~~e~ 253 (433)
-..-|++++++..+-+-+-++|+| +-|+-.|.+-.+- +++ + + ++.-|--|.+ -|-| |.+ |+|++++.
T Consensus 216 t~eqw~ki~~~~~~k~~~pffDmA-YQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~ 294 (427)
T KOG1411 216 TKEQWEKISDLIKEKNLLPFFDMA-YQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDADE 294 (427)
T ss_pred CHHHHHHHHHHHHHCCCCCHHHHH-HCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHCCHHHHCCCEEEEEECCHHH
T ss_conf 088899999876540356146655-4042358702457899999870775676555655232033203505787267888
Q ss_pred HHHCCHHH---CHHHHHHHHHH--HHHHHHHH---HHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCEE
Q ss_conf 65016646---54322344556--66899999---9997356489999999988899999986168523-3458889812
Q gi|254780349|r 254 AKKINSAI---FPGLQGGPFMH--SIAAKAVA---FGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDI-VSGGTDNHLM 324 (433)
Q Consensus 254 ~~~i~~av---fPg~qg~~~~~--~iaa~ava---l~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~v-v~ggTd~H~v 324 (433)
+.++++.+ .-.|-++|-.| +|++--.. |+.....+-+.-+.+++.--+.|-+.|..+|-.. +.--|+-+=+
T Consensus 295 A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGM 374 (427)
T KOG1411 295 AKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGM 374 (427)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHE
T ss_conf 88788778888601135898651145554047767777888889998776655688876776357987667999976200
Q ss_pred EECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 631665567679999988856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 325 LVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 325 lvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
.. -.|++..+++..-.+..|..-+++ ||..+-+++ ..+..+|+-|.++.+
T Consensus 375 F~---fTgl~peQv~~l~ke~~iYmT~dG--------------RiS~aG~ss-----~nV~yLa~aih~vtk 424 (427)
T KOG1411 375 FC---FTGLNPEQVDWLTKEYHIYLTKDG--------------RISMAGLSS-----SNVPYLADAIHAVTK 424 (427)
T ss_pred EE---ECCCCHHHHHHHHHHHEEEECCCC--------------EEEECCCCC-----CCCCCCCHHHHHHHC
T ss_conf 33---247899999998765236652586--------------376234565-----677541110676743
No 317
>pfam05889 SLA_LP_auto_ag Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). This family consists of several eukaryotic and archaeal proteins which are related to the human soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway. Some archaeal members are annotated as being pyridoxal phosphate-dependent enzymes.
Probab=97.77 E-value=0.0053 Score=41.43 Aligned_cols=312 Identities=15% Similarity=0.150 Sum_probs=190.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCC---CEECCCHHHHHHHHHHHHHH--HCCCCEEEE-CCCCCCCCCCCCCCCCCCCC
Q ss_conf 3600679999999999999871886---30100001679999999983--154874881-23344841114766543333
Q gi|254780349|r 71 YGGCQYVDDIENIAIERAKKLFNVN---FVNVQSHSGSQMNQGVFLAL--MHPGDSFMG-LSLDSGGHLTHGSSVNMSGK 144 (433)
Q Consensus 71 y~G~~~~d~iE~la~~~a~~lF~a~---~anvqp~SG~~An~av~~AL--l~pGD~Il~-~~l~~GGHlshg~~~~~~g~ 144 (433)
-+|+...-++-+....-+.+++|.+ .+-|-|..--+.- ..++++ .+|.-+... .-.+|- |-=+.+.+.|.
T Consensus 48 AaGsSll~kLTn~l~~d~lr~~G~~s~~~~~vvP~aTGMsl-~~~L~~~~~rp~a~yViw~RiDqK---Sc~Kai~~AGl 123 (389)
T pfam05889 48 ALGSSVLAKLTNELVKDFLKLLGLREVKNCFVVPLATGMSL-LCMLSWRRKRPKAKYVIWPRIDQK---SSIKAAERAGF 123 (389)
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHH-HHHHHHHHHCCCCCEEEEECCCCC---CHHHHHHHCCC
T ss_conf 62318999999999999999829743165789504104799-999999855889978998635552---26899997697
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEE---CCCC-CCCC-CHHHHHHHHHHCCCEEEECCCCH------HH
Q ss_conf 322013665832356598999999986046678970---5524-3536-37999988641797899186201------24
Q gi|254780349|r 145 WFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVG---GTAY-SRVW-DWERFRSIADSIGAYLMADISHI------SG 213 (433)
Q Consensus 145 ~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G---~S~y-~~~~-d~~~l~eIa~~~ga~l~~D~aH~------~G 213 (433)
...+++--.+.+.-..|.+.+++.+++..++-|.|= .|.| ||.- |+.+++++|.+.+...++..|-- +-
T Consensus 124 ~p~vVe~~~~~d~l~Td~~~ie~~i~~~g~~~ilcVlsTTScFaPR~pD~v~~IAklC~~~~IpHvVNnAYGlQ~~~~~~ 203 (389)
T pfam05889 124 EPRLVETVLDGDYLITDVNDVETIIEEKGEEVILAVLSTTSCFAPRSPDNVKEIAKICAEYDVPHLVNGAYGIQSEETIR 203 (389)
T ss_pred EEEEEEEEECCCEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHH
T ss_conf 14887525228824358999999999838776689984466569999667999999999749974784303661799999
Q ss_pred HHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEE-EECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
Q ss_conf 432000123220023567404565225674489-8336205650166465432234455666899999999735648999
Q gi|254780349|r 214 LVVGGQHPSPVPHCHIVTTTTHKSLRGPRGGLI-MTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDY 292 (433)
Q Consensus 214 LIa~g~~~~Pl~~ADvvt~sTHKtl~GPrgGiI-~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Y 292 (433)
+|-... -..--|.+..||-|.|-=|-||-| .+.++++-++| +..+||--+. +.+.-+-++|...-...|+..
T Consensus 204 ~i~~a~---r~GRVDa~VQStDKNflVPVGGaIIas~d~~~i~~i-s~~YPGRAS~---sp~lDlfITLLslG~~gy~~L 276 (389)
T pfam05889 204 LIAAAH---ECGRVDAVVQSLDKNFIVPVGGAIIAAFDESFIQEI-SEEYPGRASA---RPSKDKLITLLSLGCKAYLAL 276 (389)
T ss_pred HHHHHH---HCCCCEEEEEECCCCEEEECCCEEEEECCHHHHHHH-HHCCCCCCCC---CHHHHHHHHHHHHHHHHHHHH
T ss_conf 999998---638821899706866255348748970888999999-8418997777---407999999999748889999
Q ss_pred HHHHHHHHHHHHHHHHH----CCCCCCCCCCCCCEEE-ECCCCC-CC---CHHHHHHHHHHCCEEEECCCCCCCCCCCCC
Q ss_conf 99999888999999861----6852334588898126-316655-67---679999988856718803789989999888
Q gi|254780349|r 293 AKQIVLNSQALAKKLQF----LGFDIVSGGTDNHLML-VDLRSK-RM---TGKRAESILGRVSITCNKNSIPFDPESPFI 363 (433)
Q Consensus 293 a~qvv~NA~~La~~L~~----~G~~vv~ggTd~H~vl-vdl~~~-~~---~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~ 363 (433)
.++-.++-+.|-+.|.+ .|-.++- -.+|+.-+ +.+... .. +-......|-.-+++--|--.+.|+.. .
T Consensus 277 l~eRke~~~~l~e~L~~~a~~~ge~lL~-t~~N~IS~aitl~~l~~~~~~~~t~lgs~Lf~r~VsG~RvV~~~~~~~--~ 353 (389)
T pfam05889 277 MKEQKEMFPLLRELLKDLAEEVGEQLLD-VPHNPISSAMTLETLDEISKKGRTDLGSELFSRRVTGARVVRSSDPFG--T 353 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCEEEC-CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCC--E
T ss_conf 9999999999999999999982987513-899951688873455666755499999999756787651665688853--4
Q ss_pred CCCCCCCCHHHH---HCCCCHHHHHHHHHHHHHHHH
Q ss_conf 985122466673---079998999999999999960
Q gi|254780349|r 364 TSGIRLGTPSGT---TRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 364 ~sGiRlGT~aiT---trG~~e~em~~iA~li~~~L~ 396 (433)
..|--.-.+.+| .-||+.+|+....+.+.++|+
T Consensus 354 ~~~~~y~~~Ylt~aaaiG~~~~dVd~f~~rL~k~l~ 389 (389)
T pfam05889 354 IEGCEYHGRYLNIASAIGMKDEDVDYVIERLDEILE 389 (389)
T ss_pred EECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHC
T ss_conf 616768836789998708868999999999998529
No 318
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.77 E-value=0.0054 Score=41.41 Aligned_cols=285 Identities=14% Similarity=0.126 Sum_probs=160.4
Q ss_pred HHHHHHHHHHHHHHHHCCCC--C-EECCCHHHHHHHHHHHHHHHCCCCE--EEECCCCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 79999999999999871886--3-0100001679999999983154874--8812334484111476654333332201-
Q gi|254780349|r 76 YVDDIENIAIERAKKLFNVN--F-VNVQSHSGSQMNQGVFLALMHPGDS--FMGLSLDSGGHLTHGSSVNMSGKWFKAI- 149 (433)
Q Consensus 76 ~~d~iE~la~~~a~~lF~a~--~-anvqp~SG~~An~av~~ALl~pGD~--Il~~~l~~GGHlshg~~~~~~g~~~~~~- 149 (433)
..-.+-.-+++..++||+.. | +-.=+-+++.+.-++.+.|+..+.+ |... +-|. ++.++-..+
T Consensus 47 ~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~g------~Ws~-----~a~~eA~~~~ 115 (365)
T COG1932 47 EFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDTG------AWSE-----FAIKEAKKVG 115 (365)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEE------EHHH-----HHHHHHHHHC
T ss_conf 8899999999989999579987469997485378999888864213575057662------1457-----6899999864
Q ss_pred --CCCCCCCCCCCCHHHHHHHHHH-HCC-C--EEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCC
Q ss_conf --3665832356598999999986-046-6--789705524353637999988641797899186201244320001232
Q gi|254780349|r 150 --PYNVRKEDGLLDMHEIESLAIE-YNP-K--LIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSP 223 (433)
Q Consensus 150 --~y~~d~~~~~ID~d~~~~~a~~-~kP-k--lIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~P 223 (433)
+--.+.....=||..+-++.+- ... . +.+|- -....-.-|.....+... +.+++|+| .+.+-.|
T Consensus 116 ~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~ayv~~~~-NeTi~Gv~v~~~p~~~~~--~~~v~D~S-------S~ilsr~ 185 (365)
T COG1932 116 KQPKLIDARIEEAGYGSIPDLSKWDFSDNDAYVHFCW-NETISGVEVPELPDIGSD--GLLVADAS-------SAILSRP 185 (365)
T ss_pred CCCCCCCCCEECCCCCCCCCHHHCCCCCCCCEEEEEC-CCCCCCEECCCCCCCCCC--CEEEEECC-------CHHHCCC
T ss_conf 5653123200026766799822146677755799934-886121571688988877--60899656-------2775577
Q ss_pred CCC--CCEEEECCCCCCCCCCC-EEEEECCCCHHHHCCHHHCHHH----H--------HHHHHHHHHHHHHHHHHHHCHH
Q ss_conf 200--23567404565225674-4898336205650166465432----2--------3445566689999999973564
Q gi|254780349|r 224 VPH--CHIVTTTTHKSLRGPRG-GLIMTNHADLAKKINSAIFPGL----Q--------GGPFMHSIAAKAVAFGEALSSE 288 (433)
Q Consensus 224 l~~--ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~i~~avfPg~----q--------g~~~~~~iaa~aval~Ea~~~~ 288 (433)
++. -||++++-.|.| ||.| ++++-++ ++-+++.+.-.|.+ + -.|-+-++.-....|+-+....
T Consensus 186 iDvsk~dviyagaQKnl-GpaGltvvIvr~-~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~G 263 (365)
T COG1932 186 IDVSKYDVIYAGAQKNL-GPAGLTVVIVRP-DLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQG 263 (365)
T ss_pred CCHHHCCEEEEEHHHCC-CCCCEEEEEECH-HHHHCCCCCCCCHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 77567135887621125-765539999868-9970113568961764312110488427848999999999999999749
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHCCCCC--CCCCCCCCEEE-ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCC
Q ss_conf 8-9999999988899999986168523--34588898126-316655676799999888567188037899899998889
Q gi|254780349|r 289 F-RDYAKQIVLNSQALAKKLQFLGFDI--VSGGTDNHLML-VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFIT 364 (433)
Q Consensus 289 f-~~Ya~qvv~NA~~La~~L~~~G~~v--v~ggTd~H~vl-vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~ 364 (433)
+ +.-.++--+||+.|.+...+++|-. +...+.+-+.. .++.+..++ +.+-..++++|.+.-|- . ..+
T Consensus 264 Gl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~~~ld-~~fv~eae~~gl~~lkG-----h---r~v 334 (365)
T COG1932 264 GLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRMNVTFTLVDAELD-KGFVAEAEAAGLIYLKG-----H---RSV 334 (365)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEEEECCCHHHH-HHHHHHHHHCCCCEECC-----C---CCC
T ss_conf 99999998899899999998727753344552121532689872737777-99999999737741026-----6---477
Q ss_pred CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 85122466673079998999999999999960
Q gi|254780349|r 365 SGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 365 sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
+|+|+.--. -|..++++.+.+||.....
T Consensus 335 gGmRasiyn----A~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 335 GGLRASIYN----AVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred CCEEEEEEC----CCCHHHHHHHHHHHHHHHH
T ss_conf 861665435----7788999999999999998
No 319
>KOG1404 consensus
Probab=97.77 E-value=0.0018 Score=44.68 Aligned_cols=202 Identities=21% Similarity=0.264 Sum_probs=117.6
Q ss_pred HHHHHHHHHHCCCEE---E------EECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC----CCE
Q ss_conf 999999986046678---9------705524353637999988641797899186201244320001232200----235
Q gi|254780349|r 163 HEIESLAIEYNPKLI---I------VGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH----CHI 229 (433)
Q Consensus 163 d~~~~~a~~~kPklI---i------~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~----ADv 229 (433)
+++++++....|.-| | +|+-+-+-+-=+|+.+++|++.|-++++|..+.. .=-.|-|= -|+. -|+
T Consensus 199 ~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtG-fGRtG~~w-gfe~h~v~PDI 276 (442)
T KOG1404 199 KELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTG-FGRTGHMW-GFESHGVVPDI 276 (442)
T ss_pred HHHHHHHHHCCCCCEEEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHC-CCCCCCCC-CCCCCCCCCCH
T ss_conf 87778887358775147875300167753138811899999999975978985434436-45552510-10016877209
Q ss_pred EEECCCCCCCC--CCCEEEEECCCCHHHHCCHHH--CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Q ss_conf 67404565225--674489833620565016646--54322344556668999999997356489999999988899999
Q gi|254780349|r 230 VTTTTHKSLRG--PRGGLIMTNHADLAKKINSAI--FPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAK 305 (433)
Q Consensus 230 vt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~av--fPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~ 305 (433)
||. -|.+.+ |-|++|.+ +|+++-+++.. |-.++|+| +.+-+++||- +.... .+.++||+..+.
T Consensus 277 vTm--AKgiGnG~Pl~AVvtt--~EIa~v~~~~~~~fnTyggnP-~a~avg~aVL--~Vike------e~LqE~aa~vG~ 343 (442)
T KOG1404 277 VTM--AKGIGNGFPLGAVVTT--PEIADVLNQKSSHFNTYGGNP-VACAVGLAVL--KVIKE------ENLQENAAEVGS 343 (442)
T ss_pred HHH--HHHCCCCCCCEEEECC--HHHHHHHHHCCCCCCCCCCCC-HHHHHHHHHH--HHHHH------HHHHHHHHHHHH
T ss_conf 999--8652488700256327--899999985213520337882-5678889999--99988------767888999999
Q ss_pred HHHHC------CCCCCCCCCCCCEE----EECCCCCC-----CCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 98616------85233458889812----63166556-----76799999888567188037899899998889851224
Q gi|254780349|r 306 KLQFL------GFDIVSGGTDNHLM----LVDLRSKR-----MTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLG 370 (433)
Q Consensus 306 ~L~~~------G~~vv~ggTd~H~v----lvdl~~~~-----~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlG 370 (433)
.|.++ +++++..=--.-++ +|+-+++. --|..+-+.|-+.|+.|+|-+|-++ -+||-
T Consensus 344 yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~--------vfria 415 (442)
T KOG1404 344 YLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGN--------VFRIA 415 (442)
T ss_pred HHHHHHHHHHHCCCCEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCEEEECCCCCCE--------EEEEC
T ss_conf 9999999874148735521354148888872266778894067788998998974856410423231--------79836
Q ss_pred CHHHHHCCCCHHHHHHHHHHH
Q ss_conf 666730799989999999999
Q gi|254780349|r 371 TPSGTTRGFKEKDFEYIGELI 391 (433)
Q Consensus 371 T~aiTtrG~~e~em~~iA~li 391 (433)
-|-.-| .+|.+-+.++.
T Consensus 416 PPlciT----~edi~f~~~~~ 432 (442)
T KOG1404 416 PPLCIT----KEDIDFAVEYF 432 (442)
T ss_pred CCEECC----HHHHHHHHHHH
T ss_conf 985434----89988999999
No 320
>KOG0633 consensus
Probab=97.70 E-value=0.0019 Score=44.61 Aligned_cols=257 Identities=21% Similarity=0.194 Sum_probs=155.4
Q ss_pred ECCCHHHHHH-HHHHHHHHHCCC-CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-CC
Q ss_conf 1000016799-999999831548-74881233448411147665433333220136658323565989999999860-46
Q gi|254780349|r 98 NVQSHSGSQM-NQGVFLALMHPG-DSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEY-NP 174 (433)
Q Consensus 98 nvqp~SG~~A-n~av~~ALl~pG-D~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~-kP 174 (433)
|.-..-|+.- --+..-+.+-|| ++|+..+...+=. .+...--..+++..+.+++ ..+|.|++.+..+.. +|
T Consensus 88 nic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY-----~v~A~iNd~eVvkvpl~pd-F~lnvdai~evl~~ds~i 161 (375)
T KOG0633 88 NICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMY-----VVDAAINDAEVVKVPLNPD-FSLNVDAIAEVLELDSKI 161 (375)
T ss_pred CEEEECCCHHHHHHHHHHEECCCCCCEEECCCCCEEE-----EEEEECCCCEEEEECCCCC-CCCCHHHHHHHHHCCCCC
T ss_conf 4677217288898878100058843036569854058-----9974037734798037887-555699999998326643
Q ss_pred CEEEEECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCCH--HHHHHHHCCCCCCCCCCE-EEECCCCCC--CCCCCE
Q ss_conf 67897055243-----53637999988641797899186201--244320001232200235-674045652--256744
Q gi|254780349|r 175 KLIIVGGTAYS-----RVWDWERFRSIADSIGAYLMADISHI--SGLVVGGQHPSPVPHCHI-VTTTTHKSL--RGPRGG 244 (433)
Q Consensus 175 klIi~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~--~GLIa~g~~~~Pl~~ADv-vt~sTHKtl--~GPrgG 244 (433)
|++++-....| ..-|++++-|--| +.++++|.|-+ +| .+...+=--+|-.. |.-|..|+| .|-|=|
T Consensus 162 K~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidFsg--~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG 237 (375)
T KOG0633 162 KCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDFSG--VESRMKLVKKYPNLIVLQTLSKSFGLAGIRVG 237 (375)
T ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHCCC--CCEEEEEEEEEEECC--CCCCCHHHHHCCCEEEHHHHHHHCCCCEEEEE
T ss_conf 28998179898733033889999982988--837997500276025--40024576748865225455554175326750
Q ss_pred EEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCC
Q ss_conf 8983362056501664654322344556668999999997356----4899999999888999999861685-2334588
Q gi|254780349|r 245 LIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSS----EFRDYAKQIVLNSQALAKKLQFLGF-DIVSGGT 319 (433)
Q Consensus 245 iI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~----~f~~Ya~qvv~NA~~La~~L~~~G~-~vv~ggT 319 (433)
+-.+.. ++++-++++--|.-.+.+ ...+|++ |+++ .-.+|...+++---.|.++|.+-.| +=.-||.
T Consensus 238 ~~~~~~-~ia~iln~~KaPYNiS~~--~s~~AL~-----Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~ 309 (375)
T KOG0633 238 YGAFPL-SIAEILNRAKAPYNISVA--GSVAALA-----ALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGS 309 (375)
T ss_pred CCCCCH-HHHHHHHHCCCCCCCCCH--HHHHHHH-----HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 333527-899999862288521624--5799998-----61801122789999999999999987763276545777866
Q ss_pred CCCEEEECCCC--CCCCHHHHHHHHHHCCEEEE-CCCCCCCCCCCCCCCC--CCCCCHHHHHCC
Q ss_conf 89812631665--56767999998885671880-3789989999888985--122466673079
Q gi|254780349|r 320 DNHLMLVDLRS--KRMTGKRAESILGRVSITCN-KNSIPFDPESPFITSG--IRLGTPSGTTRG 378 (433)
Q Consensus 320 d~H~vlvdl~~--~~~~G~~a~~~Le~~gI~~N-kn~iP~D~~~~~~~sG--iRlGT~aiTtrG 378 (433)
|...+|+.+.. .++.-+..-+.+.+.|+.|- +++-|+= ..- |-.||+|-+|-=
T Consensus 310 daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c------~G~lRitvGt~EentvL 367 (375)
T KOG0633 310 DANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGC------KGYLRITVGTPEENTVL 367 (375)
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCC------CEEEEEECCCCCCCHHH
T ss_conf 66579999707873788999999887566699971785046------50089971786422089
No 321
>KOG1358 consensus
Probab=97.70 E-value=0.003 Score=43.15 Aligned_cols=331 Identities=20% Similarity=0.246 Sum_probs=187.2
Q ss_pred HHCCCCCCCCCCCC----HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHH
Q ss_conf 83888104301029----89999830510288657988875336006799999999999998718863010000167999
Q gi|254780349|r 33 NDEIQLIASENIVS----RAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMN 108 (433)
Q Consensus 33 ~~~l~LiASEN~~S----~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An 108 (433)
++++|+ ||-||.. +.+.+....++ -||--|--|-|-+-|+. |.--++ .++..+.+|++-+-|.+. |..+.
T Consensus 94 ~~~~N~-aS~NfL~l~~~~~ike~a~~~l-rkyGvGsCGPrGFYGt~--DvHldl-E~~iakF~G~E~aivYs~-gF~ti 167 (467)
T KOG1358 94 KDVLNF-ASANFLGLIENEEIKEEASFTL-RKYGVGSCGPRGFYGTI--DVHLDL-EKRIAKFMGTEDAIVYSY-GFSTI 167 (467)
T ss_pred CEEECC-CCHHHHHHCCCHHHHHHHHHHH-HHHCCCCCCCCCCCCCC--EEECCC-HHHHHHHHCCCCEEEECC-CCCHH
T ss_conf 400111-2100355405677899999999-97388776787643122--110466-778987508864266326-63003
Q ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH------CCC------E
Q ss_conf 9999983154874881233448411147665433333220136658323565989999999860------466------7
Q gi|254780349|r 109 QGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEY------NPK------L 176 (433)
Q Consensus 109 ~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~------kPk------l 176 (433)
-.+.-|+.+.||-|..-... ++.- ...-...++.-+-+ ...|+..++.+..+- .|| .
T Consensus 168 ~S~ipafsKrGDIi~~de~~---nfaI----q~GlqlSRS~i~~F----khndm~~lerll~E~~~~~~K~~k~~~~Rrf 236 (467)
T KOG1358 168 ESAIPAFSKRGDIIFVDEAV---NFAI----QKGLQLSRSTISYF----KHNDMEDLERLLPEQEDEDQKNPKKALTRRF 236 (467)
T ss_pred HHCCHHHHCCCCEEEEEHHH---HHHH----HHHHHHHHHEEEEE----CCCCHHHHHHHCCCCCHHHHHCCCCCCCEEE
T ss_conf 20001231147679986210---2998----87776402003785----4788788997545762223314444541379
Q ss_pred EEE-E-CCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHH------HCCCCCCCCCCEEEECCCCCCCCCCCEEEEE
Q ss_conf 897-0-5524353637999988641797899186201244320------0012322002356740456522567448983
Q gi|254780349|r 177 IIV-G-GTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVG------GQHPSPVPHCHIVTTTTHKSLRGPRGGLIMT 248 (433)
Q Consensus 177 Ii~-G-~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~------g~~~~Pl~~ADvvt~sTHKtl~GPrgGiI~~ 248 (433)
|++ | .-.++...+..++.+...++...++.|.+-..|.... ..|.-|...-|+++++.--.|.+ -||+...
T Consensus 237 iv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas-~GgFc~G 315 (467)
T KOG1358 237 IVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALAS-GGGFCAG 315 (467)
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC-CCCEEEC
T ss_conf 999764047775035099999876625899983333324303568663246898803112565114444314-6754325
Q ss_pred CCC-CHHHHCC------HHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 362-0565016------646543223445566689999999973564899999999888999999861685233458889
Q gi|254780349|r 249 NHA-DLAKKIN------SAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDN 321 (433)
Q Consensus 249 ~~~-e~~~~i~------~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~ 321 (433)
+.- -..+++. +|-.|.+ +..-|-+++-..| .+|+ --++..+-+..+-+.|..+-+=.++|--.+
T Consensus 316 ~~~i~~hQrLSg~~Y~fSAslPp~-----la~aa~~ai~i~~-~~p~---~~~~L~~k~~~~H~~l~~~s~~~v~~~~~S 386 (467)
T KOG1358 316 KSFIADHQRLSGSGYCFSASLPPY-----LAGAAIKAILIEE-WNPE---IVQPLRAKVAKFHAALSSNSGFIVSGSPES 386 (467)
T ss_pred CEEEEEEEECCCCCEEEECCCCHH-----HHHHHHHHHHHHH-HCCC---HHHHHHCCCCCCCHHHHCCCCEEEECCCCC
T ss_conf 523675300156625651347555-----5456777777776-1840---222222025210466604772598468677
Q ss_pred CEEEECCCCCCCCHHHHHH--------HHHHCCEEEECCC-CCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 8126316655676799999--------8885671880378-998999988898512246667307999899999999999
Q gi|254780349|r 322 HLMLVDLRSKRMTGKRAES--------ILGRVSITCNKNS-IPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIA 392 (433)
Q Consensus 322 H~vlvdl~~~~~~G~~a~~--------~Le~~gI~~Nkn~-iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~ 392 (433)
-.+.+.++....+-.+-++ .+.+ ++.+-++. +-++.+-| .+.+|||- ...||.|+|.+..|+.|.
T Consensus 387 Pi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~-~~pSiri~----~~a~~seeel~ra~~~ik 460 (467)
T KOG1358 387 PIIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCP-IPPSIRIC----VSAGMSEEELERAAELIK 460 (467)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHHH-CCEEHHHHHHHHCCCCC-CCCCEEEE----EECCCCHHHHHHHHHHHH
T ss_conf 2001232455566677999999999999862-53100314553033479-99857998----707999999999999999
Q ss_pred HHHH
Q ss_conf 9960
Q gi|254780349|r 393 QILD 396 (433)
Q Consensus 393 ~~L~ 396 (433)
++..
T Consensus 461 ~~~~ 464 (467)
T KOG1358 461 EVAS 464 (467)
T ss_pred HHHH
T ss_conf 9998
No 322
>PRK12403 putative aminotransferase; Provisional
Probab=97.69 E-value=0.0071 Score=40.56 Aligned_cols=205 Identities=16% Similarity=0.215 Sum_probs=99.7
Q ss_pred HHHHHHHHHCC---CEEEE----E--CCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCC-CCCC-CCEEE
Q ss_conf 99999986046---67897----0--5524353637999988641797899186201244-32000123-2200-23567
Q gi|254780349|r 164 EIESLAIEYNP---KLIIV----G--GTAYSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPS-PVPH-CHIVT 231 (433)
Q Consensus 164 ~~~~~a~~~kP---klIi~----G--~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~-Pl~~-ADvvt 231 (433)
++++.+.+..| .-||+ | +...+-+-=++++|+|||+.|++|++|.=.+ |+ =.|..|.. -+.- .|++|
T Consensus 210 ~le~~i~~~~~~~iAavi~EPi~g~gG~i~pp~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~fa~e~~gV~PDivt 288 (460)
T PRK12403 210 QLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIG-GFGRTGEWFAHEHFGFEPDTLS 288 (460)
T ss_pred HHHHHHHHHCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHHHCCCCEEEEECCCC-CCCCCCCCCCCCCCCCCCCEEE
T ss_conf 999999962898669999545225586572756776999999732596699862512-7763437730021795877122
Q ss_pred ECCCCCCCC---CCCEEEEECCCCHHHHCC--HHHCH--HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH-H
Q ss_conf 404565225---674489833620565016--64654--322344556668999999997356489999999988899-9
Q gi|254780349|r 232 TTTHKSLRG---PRGGLIMTNHADLAKKIN--SAIFP--GLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQA-L 303 (433)
Q Consensus 232 ~sTHKtl~G---PrgGiI~~~~~e~~~~i~--~avfP--g~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~-L 303 (433)
.+ |.|.| |=|+++.++ ++.+.+. ..+|. ++.+|.-+..-||+++ .+.++. ...++|++. +
T Consensus 289 ~g--K~l~gG~~Plsav~~~~--~i~~~~~~~~~~~~hg~T~~Gnpla~Aaala~--l~~i~~------e~l~~~~~~~~ 356 (460)
T PRK12403 289 IA--KGLTSGYVPMGGLVLSK--RIAEALVEQGGVFAHGLTYSGHPVAAAVAIAN--LKALRD------EGVVTRVKDDT 356 (460)
T ss_pred EC--CCCCCCCCCEEEEEECH--HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH--HHHHHH------CCHHHHHHHHH
T ss_conf 21--24457877617997358--99987503786501477889998999999999--999986------66999999999
Q ss_pred H----HHHHHC--CCCCCCCCCCCCEEE-ECCCCCCCC------HHHH----HHHHHHCCEEEECCCCCCCCCCCCCCCC
Q ss_conf 9----998616--852334588898126-316655676------7999----9988856718803789989999888985
Q gi|254780349|r 304 A----KKLQFL--GFDIVSGGTDNHLML-VDLRSKRMT------GKRA----ESILGRVSITCNKNSIPFDPESPFITSG 366 (433)
Q Consensus 304 a----~~L~~~--G~~vv~ggTd~H~vl-vdl~~~~~~------G~~a----~~~Le~~gI~~Nkn~iP~D~~~~~~~sG 366 (433)
+ +.|.+. .+++|..-.---+++ |++.+...+ ..+. .+.+-..|+++... ...
T Consensus 357 g~~l~~~L~~l~~~~p~vgdVRG~GLm~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Glli~~~-----------~~~ 425 (460)
T PRK12403 357 GPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST-----------LGR 425 (460)
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEC-----------CCE
T ss_conf 999999999987259958863014549999942576421136525789999999999799899736-----------980
Q ss_pred CCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 122466673079998999999999999960
Q gi|254780349|r 367 IRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 367 iRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
+++. |.++ ..++|++++.+.+.++|+
T Consensus 426 ~~l~-PPLi---it~~eid~~~~~l~~al~ 451 (460)
T PRK12403 426 MIMA-PALV---AGRAEIDELVDKTRIAVD 451 (460)
T ss_pred EEEE-CCCC---CCHHHHHHHHHHHHHHHH
T ss_conf 9998-9943---889999999999999999
No 323
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases; InterPro: IPR004636 This family of proteins, for which ornithine aminotransferases form an outgroup, consists mostly of proteins designated acetylornithine aminotransferase. However, the two very closely related members from Escherichia coli are assigned different enzymatic activities. One is acetylornithine aminotransferase (2.6.1.11 from EC), ArgD, an enzyme of arginine biosynthesis, while another is succinylornithine aminotransferase, an enzyme of the arginine succinyltransferase pathway, an ammonia-generating pathway of arginine catabolism . Members of this family may also act on ornithine, like ornithine aminotransferase (2.6.1.13 from EC) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (2.6.1.17 from EC, DapC, an enzyme of lysine biosynthesis) . ; GO: 0008483 transaminase activity, 0006525 arginine metabolic process.
Probab=97.65 E-value=0.0079 Score=40.23 Aligned_cols=281 Identities=19% Similarity=0.274 Sum_probs=159.7
Q ss_pred HHHHHHHHHHHHHHHHCCC-------C--CEECCCHHHHHHHHHHHHHH-------HCCCCEEEECCCCCCCCCCCCCCC
Q ss_conf 7999999999999987188-------6--30100001679999999983-------154874881233448411147665
Q gi|254780349|r 76 YVDDIENIAIERAKKLFNV-------N--FVNVQSHSGSQMNQGVFLAL-------MHPGDSFMGLSLDSGGHLTHGSSV 139 (433)
Q Consensus 76 ~~d~iE~la~~~a~~lF~a-------~--~anvqp~SG~~An~av~~AL-------l~pGD~Il~~~l~~GGHlshg~~~ 139 (433)
+..+-++||.+++...+.= + ||| ||+-||-|++.=- -+-..+|+++.-+. ||+..
T Consensus 69 ~~~~~~~LA~kLv~~~~~dgGqhd~~rvFFCN----SGaEAnEAAlKlARk~~~~~g~~k~~ivaf~naF-----HGRT~ 139 (402)
T TIGR00707 69 YTEPQEELAEKLVEHSGADGGQHDASRVFFCN----SGAEANEAALKLARKYTGDKGKEKKKIVAFENAF-----HGRTM 139 (402)
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC----CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC-----CCCHH
T ss_conf 58089999999999970468830232667514----7478999999998986402278865388887077-----63004
Q ss_pred ---CCCC-----CCCCCCCCCCCCCCCCCC-HHHHHHHHHHH----CCCEEEE----E-CCCCCCCCC-HHHHHHHHHHC
Q ss_conf ---4333-----332201366583235659-89999999860----4667897----0-552435363-79999886417
Q gi|254780349|r 140 ---NMSG-----KWFKAIPYNVRKEDGLLD-MHEIESLAIEY----NPKLIIV----G-GTAYSRVWD-WERFRSIADSI 200 (433)
Q Consensus 140 ---~~~g-----~~~~~~~y~~d~~~~~ID-~d~~~~~a~~~----kPklIi~----G-~S~y~~~~d-~~~l~eIa~~~ 200 (433)
++++ +.|...+=+++--.+ =| .+++.+.+..+ |-.-||+ | +=++|=.-+ ++++||||++.
T Consensus 140 g~LsaTgqpKy~~~F~PLvpgf~y~~y-NDe~~~l~~~i~~~~eg~rtAAvivEpiQGEgGV~pa~~~fL~a~r~lc~~~ 218 (402)
T TIGR00707 140 GALSATGQPKYQKPFEPLVPGFKYVPY-NDEIEALKEAIDDEKEGDRTAAVIVEPIQGEGGVVPADKEFLKALRELCEDK 218 (402)
T ss_pred HHHHCCCCCCCCCCCCCCCCCCEEECC-CCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 543004776456857884238124448-8978999998502577871889998532178653348778999999998648
Q ss_pred CCEEEECCCCHHHH-HHHHCC-----CCCCCCCCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCHHHCHHHHH-----
Q ss_conf 97899186201244-320001-----23220023567404565225--674489833620565016646543223-----
Q gi|254780349|r 201 GAYLMADISHISGL-VVGGQH-----PSPVPHCHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINSAIFPGLQG----- 267 (433)
Q Consensus 201 ga~l~~D~aH~~GL-Ia~g~~-----~~Pl~~ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~avfPg~qg----- 267 (433)
|++|++|.=|+- + =-|..| +|-+ +-||+|. =|-|.| |=|++|+. + +.++.+ -||..|
T Consensus 219 ~~LLI~DEVQtG-~GRTG~~fA~~Hygse~-~PDi~T~--AKgLGgG~PiGA~~~~-e-~~a~~~----~~G~HGsTFGG 288 (402)
T TIGR00707 219 DALLIFDEVQTG-LGRTGKLFAYEHYGSEV-EPDIITL--AKGLGGGVPIGAVLAK-E-EVAEAL----TPGDHGSTFGG 288 (402)
T ss_pred CEEEEEEEEEEC-CCCCHHHHHHHCCCCCC-CCHHHHH--HHHHHCCCHHHHHEEH-H-HHHHHC----CCCCCCCCCCC
T ss_conf 918999447528-77433223312068845-5238754--0555278202232023-6-787315----89898666787
Q ss_pred HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---CCCCCCCEEE-ECCCCCCCCHHHHHHHHH
Q ss_conf 445566689999999973564899999999888999999861685233---4588898126-316655676799999888
Q gi|254780349|r 268 GPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIV---SGGTDNHLML-VDLRSKRMTGKRAESILG 343 (433)
Q Consensus 268 ~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv---~ggTd~H~vl-vdl~~~~~~G~~a~~~Le 343 (433)
|| +.+-|+++| |....++.+ -++|-+-.+.|-+.|.+.+-+.. +-===--||+ +++....+..+++.+.+.
T Consensus 289 NP-LAc~Aa~~v-l~~i~~~~~---l~~v~~~G~~f~~~L~~~~~~~~~l~k~VRG~GLmlG~e~~~~~~~a~~~~~~a~ 363 (402)
T TIGR00707 289 NP-LACAAALAV-LEVIEKERL---LEKVKEKGDYFKERLEELIKKYIDLIKEVRGKGLMLGIELEAPSVAAKDIVKEAR 363 (402)
T ss_pred CH-HHHHHHHHH-HHHHHCCCH---HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEEECCCCCCHHHHHHHHH
T ss_conf 38-999998776-665505104---7899998899999999861776674015323123465564278655899999998
Q ss_pred HCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 5671880378998999988898512246667307999899999999999996
Q gi|254780349|r 344 RVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 344 ~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
..|..||-- ++ +-||+= |+++ ..+++|.+.-+.+..+|
T Consensus 364 ~~GlLv~~A-------g~---~v~Rf~-PPL~---i~~e~i~~~~~~l~~~~ 401 (402)
T TIGR00707 364 EKGLLVNTA-------GP---KVLRFV-PPLI---ITEEEIDEAVDALEEAI 401 (402)
T ss_pred HCCCEEECC-------CC---CEEEEC-CCCC---CCHHHHHHHHHHHHHHH
T ss_conf 489268817-------88---706615-7864---45889999999999982
No 324
>TIGR02006 IscS cysteine desulfurase IscS; InterPro: IPR010240 This entry represents cysteine deusulphurase (IscS), one of several cysteine desulphurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulphur cluster assembly.; GO: 0030170 pyridoxal phosphate binding, 0031071 cysteine desulfurase activity, 0006534 cysteine metabolic process.
Probab=97.64 E-value=0.003 Score=43.13 Aligned_cols=338 Identities=17% Similarity=0.223 Sum_probs=195.2
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH-HHHHHHHHH---
Q ss_conf 4301029899998305102886579888753360067999999999999987188630100001679-999999983---
Q gi|254780349|r 40 ASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQ-MNQGVFLAL--- 115 (433)
Q Consensus 40 ASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~-An~av~~AL--- 115 (433)
++...+.+.|.+.+...|+.+-.-|-|..|-+.=.-..++.-+.|.....++.+++.-++-..||.. +|-.+..+.
T Consensus 10 ~~t~P~~~~v~~~m~~~~~~~g~fGnP~s~sh~fGW~a~~~v~~ar~~~~~~~~~d~~ei~ftsGate~~nl~i~G~a~f 89 (404)
T TIGR02006 10 AATTPVDKRVAEKMLEYLTEKGNFGNPASRSHKFGWEAEEAVENARNEVAELIGADSREIVFTSGATESDNLAIKGVAKF 89 (404)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 35686458999999998874156688642343345306889999999999984588740787237753024788889999
Q ss_pred -HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEE-EEE-CCCCCCCCCHHH
Q ss_conf -15487488123344841114766543333322013665832356598999999986046678-970-552435363799
Q gi|254780349|r 116 -MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLI-IVG-GTAYSRVWDWER 192 (433)
Q Consensus 116 -l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklI-i~G-~S~y~~~~d~~~ 192 (433)
-+.|.+|++...+|-.=|.--+ .+...+|++....+. ++|.||++.++..++... =|+ +.- .....-.-|++.
T Consensus 90 y~~k~~h~it~~~ehk~vl~~~r--~le~~G~~vtyl~~~-~~G~~~~~~l~~~~~~~t-~lvs~m~vnne~G~~~~~~~ 165 (404)
T TIGR02006 90 YKSKGKHIITSKTEHKAVLDTCR--ELEREGFEVTYLEVK-EDGLIDLEELKAAIRDDT-ILVSVMAVNNEIGVIQDIAA 165 (404)
T ss_pred HHCCCCEEEEEEHHHHHHHHHHH--HHHHCCCEEEEEECC-CCCCEEHHHHHHHHHCCE-EEEEEEEECCCCCHHHHHHH
T ss_conf 74237667864003678999999--887578168985014-566210899998741270-57875531144330465889
Q ss_pred HHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCCCCCCC-EEEE-ECCCCHHHHCCHHHC-----H
Q ss_conf 9988641797899186201244320001232200--23567404565225674-4898-336205650166465-----4
Q gi|254780349|r 193 FRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSLRGPRG-GLIM-TNHADLAKKINSAIF-----P 263 (433)
Q Consensus 193 l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl~GPrg-GiI~-~~~~e~~~~i~~avf-----P 263 (433)
+.+||++...++++|+++..|-|.- .+.. .|++..|.||.. ||+| |-+. .+++ .-+++..+. -
T Consensus 166 i~~~~r~~~~~fh~d~~q~~Gk~~~-----~~~~~~~dl~s~s~hk~y-GPkGiGalyv~~~P--rvr~~~~~~GGG~er 237 (404)
T TIGR02006 166 IGELCRERKVLFHVDAAQSVGKIPI-----DVEELKVDLMSISGHKIY-GPKGIGALYVRRKP--RVRLEALIHGGGHER 237 (404)
T ss_pred HHHHHHHCCEEEEEECCCCCCCEEE-----EHHHHHHHHHHHCCCCCC-CCCCCCEEEEECCC--CEEEEEECCCCCCCC
T ss_conf 9987630441476400013451134-----353431012100123102-67552124551277--335520004887435
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE--CCCCCCCCHHHHHH
Q ss_conf 322-344556668999999997356489999999988899999986168523345888981263--16655676799999
Q gi|254780349|r 264 GLQ-GGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLV--DLRSKRMTGKRAES 340 (433)
Q Consensus 264 g~q-g~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlv--dl~~~~~~G~~a~~ 340 (433)
|+. |..-.|.|.++..+++-+.+ +...-..++..-...|...+..- -.+-..+.-.|.+-- ++.-..+.|...--
T Consensus 238 G~r~Gtl~~~~ivG~G~~~~~a~~-~~~~~~~~~~~l~~~~~~~~~~~-~~~~~n~~~~~~~~~~ln~sf~~veGesl~~ 315 (404)
T TIGR02006 238 GMRSGTLPTHQIVGLGEAFRIAKE-ELAKDTARVLKLRDRLLNGIESI-EEVYLNGDLEQRVKGNLNVSFNYVEGESLIM 315 (404)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCHHHHHHHHHHEEEEEEECHHHHHH
T ss_conf 410244320143210167899999-99888999999999999987445-6533121144311222101222002047888
Q ss_pred HHHHCCEEEECCCCCCC-----------CCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 88856718803789989-----------99988898512246667307999899999999999996
Q gi|254780349|r 341 ILGRVSITCNKNSIPFD-----------PESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 341 ~Le~~gI~~Nkn~iP~D-----------~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
++....|...-.+-.-- -..-+..+-||++.--.|| ++|+....+.+...+
T Consensus 316 a~~~~avssGsaCts~slePsyvlr~lG~~~elah~s~r~~~Gr~tt----~~e~~~~~~~v~~~~ 377 (404)
T TIGR02006 316 ALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFTLGRFTT----EEEIDYAVKLVKSAV 377 (404)
T ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCH----HHHHHHHHHHHHHHH
T ss_conf 88887530564100133535578876064201223222100111210----789999999999999
No 325
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=97.61 E-value=0.0089 Score=39.86 Aligned_cols=279 Identities=13% Similarity=0.071 Sum_probs=126.2
Q ss_pred HHHHHHHC-CCCCEECCCHHHHHHHHHHHHHHHC-CCCEEEECCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999871-8863010000167999999998315-48748812334484111----476654333332201366583235
Q gi|254780349|r 85 IERAKKLF-NVNFVNVQSHSGSQMNQGVFLALMH-PGDSFMGLSLDSGGHLT----HGSSVNMSGKWFKAIPYNVRKEDG 158 (433)
Q Consensus 85 ~~~a~~lF-~a~~anvqp~SG~~An~av~~ALl~-pGD~Il~~~l~~GGHls----hg~~~~~~g~~~~~~~y~~d~~~~ 158 (433)
.++..+++ +.+.+-. .-||+-||.+++..--. .|.+.+.....+..|-. ||......|.--....+.. .--
T Consensus 94 ae~l~~~~p~~~~v~F-~nSGsEA~e~AlklAR~~tgr~~i~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~--~~~ 170 (431)
T PRK06209 94 AELFLDLIDGAEMVKF-CKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTK--TFR 170 (431)
T ss_pred HHHHHHHCCCCCEEEE-CCCCCHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC--CCC
T ss_conf 9999975898656987-2788378999999999975995377705775564356655787655788875456665--647
Q ss_pred CCCHHHHHHHHHHHCC--CEEEEE--CCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHC-CCCCCCC-CCEEEE
Q ss_conf 6598999999986046--678970--552435363799998864179789918620124432000-1232200-235674
Q gi|254780349|r 159 LLDMHEIESLAIEYNP--KLIIVG--GTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQ-HPSPVPH-CHIVTT 232 (433)
Q Consensus 159 ~ID~d~~~~~a~~~kP--klIi~G--~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~-~~~Pl~~-ADvvt~ 232 (433)
.-|.++++++.+++.- .-||+. ++..|.+-=++++|++|++.|++|++|.-++ |+=.+.. .+.-+.- .|++|.
T Consensus 171 y~d~~~le~~~~~~~~~iAAvIvEPi~g~~p~~~fl~~lr~lc~~~giLLI~DEV~T-GfR~g~~~a~~~~gv~PDi~t~ 249 (431)
T PRK06209 171 YNDIASLEALFEDYPGRIACVILEPATADEPQDNFLHEVQRLCHENGALFILDEMIT-GFRWHMRGAQKLYGIVPDLSCF 249 (431)
T ss_pred CCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCC-CCCCCCCCHHHHCCCCCCEEEE
T ss_conf 655999999876455666788850313778978999999999987290799705602-6616752276620899879987
Q ss_pred CCCCCCCC--CCCEEEEECCCCHHHHC--CH----HHCH--HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q ss_conf 04565225--67448983362056501--66----4654--322344556668999999997356489999999988899
Q gi|254780349|r 233 TTHKSLRG--PRGGLIMTNHADLAKKI--NS----AIFP--GLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQA 302 (433)
Q Consensus 233 sTHKtl~G--PrgGiI~~~~~e~~~~i--~~----avfP--g~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~ 302 (433)
-|.+.| |=|++ +.++ |+.+.. .. .+|+ ++-+++-....||+| ++.+..++. ..+++-+-.+.
T Consensus 250 --gK~iggG~Pi~Av-~g~~-eim~~~~~~~~~~~~~f~~~~T~~g~p~~~AAala-tL~~~~~~~---l~~~~~~~G~~ 321 (431)
T PRK06209 250 --GKAMGNGFSISAL-AGKR-EYMELGGLEHTDFERVFLLSTTHGAETHALAAAIA-TMAIYREED---VIERLWEQGAK 321 (431)
T ss_pred --HHHHHCCCCCEEE-EEHH-HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHHHCC---HHHHHHHHHHH
T ss_conf --0132288880577-7869-97640355567866541104577888799999999-999998544---99999999999
Q ss_pred HHHHHHHC--CCCCC---C-CCCCCCEEEECCCCCCCCHHH----HHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99998616--85233---4-588898126316655676799----99988856718803789989999888985122466
Q gi|254780349|r 303 LAKKLQFL--GFDIV---S-GGTDNHLMLVDLRSKRMTGKR----AESILGRVSITCNKNSIPFDPESPFITSGIRLGTP 372 (433)
Q Consensus 303 La~~L~~~--G~~vv---~-ggTd~H~vlvdl~~~~~~G~~----a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~ 372 (433)
|.+.|.+. .++++ . -|....+.++.....+-.... .-+.+-+-||.. | +
T Consensus 322 L~~~l~~l~~~~~~~~~vr~~G~~~~~~f~~~~~~~~~~~~~~~~~~~~ml~~Gvl~-----~-----~----------- 380 (431)
T PRK06209 322 LAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQEMIRRGVLM-----P-----S----------- 380 (431)
T ss_pred HHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEH-----H-----H-----------
T ss_conf 999999999767997799764013378993244556876999999999999589751-----2-----4-----------
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 673079998999999999999960
Q gi|254780349|r 373 SGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 373 aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
...+.-.+++|+.+.-+-+.+++.
T Consensus 381 ~~iS~aHt~~di~~~l~a~~~al~ 404 (431)
T PRK06209 381 LVVSYAHGDADIERTIDAVHGALG 404 (431)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 776053399999999999999999
No 326
>PRK06149 hypothetical protein; Provisional
Probab=97.59 E-value=0.0098 Score=39.59 Aligned_cols=183 Identities=15% Similarity=0.226 Sum_probs=101.2
Q ss_pred CCHHHHHHHHHHCCCEEEECCCCHHHHHHHHC-CCCCCCC----CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCH-
Q ss_conf 63799998864179789918620124432000-1232200----23567404565225--6744898336205650166-
Q gi|254780349|r 188 WDWERFRSIADSIGAYLMADISHISGLVVGGQ-HPSPVPH----CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINS- 259 (433)
Q Consensus 188 ~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~-~~~Pl~~----ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~- 259 (433)
-=+++++++|++.|.++++|.-++ |+==.|. | --+++ -|+||. -|.+.| |=|++|.++ ++++.++.
T Consensus 765 gyl~~v~~~c~~~g~LlI~DEVQt-G~GRtG~~F-wa~e~~gv~PDIvt~--aKglg~G~PlgAvv~~~--eia~~f~~~ 838 (972)
T PRK06149 765 GYLRQVYAAVRARGGVCIADEVQV-GYGRLGHYF-WGFEQQGVVPDIITM--AKGMGNGHPLGAVITRR--EIAEALEAE 838 (972)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCC-CCCCCCCCC-CHHHHCCCCCCEEEE--CCCCCCCCCCEEEEECH--HHHHHHCCC
T ss_conf 999999999997497899613221-778576630-044542999877986--45555886647889749--999765268
Q ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCCCCCCCCEEE-ECC-CCC
Q ss_conf 465432234455666899999999735648999999998889999998616------852334588898126-316-655
Q gi|254780349|r 260 AIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL------GFDIVSGGTDNHLML-VDL-RSK 331 (433)
Q Consensus 260 avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~------G~~vv~ggTd~H~vl-vdl-~~~ 331 (433)
..|=.+-||..+.+-||+|+- +.++.+ +.++||+.+.+.|.++ -+++|..=--..+++ |++ +++
T Consensus 839 g~~~sTfgGnPlacAaalavL--~vi~~e------~L~~na~~~G~~l~~~L~~L~~~~p~IgdVRG~GLm~GiElV~d~ 910 (972)
T PRK06149 839 GYFFSSTGGSPVSCAIGMAVL--DVMREE------KLQENARRVGDHLKARLEALVDRHPLAGAVHGMGLYLGVELVRDR 910 (972)
T ss_pred CCCCCCCCCCHHHHHHHHHHH--HHHHHC------CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCC
T ss_conf 860058998989999999999--999873------699999999999999999998619948986226728999970166
Q ss_pred C------CCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 6------7679999988856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 332 R------MTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 332 ~------~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
. -....+.++|.+.||++...+ |.+ +-|||--|=+ +..+|.+++.+.+.++|.
T Consensus 911 ~t~~Pa~~~~~~i~~~~~e~Gil~~~~G-~~~-------nVlki~PPL~----i~~e~~D~~l~~l~~vL~ 969 (972)
T PRK06149 911 QTLEPATEETAAICDRLLELGVIMQPTG-DHL-------NILKIKPPLC----TDRESADFFVDMLDRVLT 969 (972)
T ss_pred CCCCCCHHHHHHHHHHHHHCCEEEECCC-CCC-------CEEEECCCCC----CCHHHHHHHHHHHHHHHH
T ss_conf 7689888999999999997895894278-988-------8799808946----769999999999999985
No 327
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=97.57 E-value=0.01 Score=39.42 Aligned_cols=286 Identities=17% Similarity=0.157 Sum_probs=130.3
Q ss_pred HHHHHHHC-CCCCEECCCHHHHHHHHHHHHHHH--CCCCEEEECCCC-CCCCCCC----CCCC-CCCCCCCCCCCCCCCC
Q ss_conf 99999871-886301000016799999999831--548748812334-4841114----7665-4333332201366583
Q gi|254780349|r 85 IERAKKLF-NVNFVNVQSHSGSQMNQGVFLALM--HPGDSFMGLSLD-SGGHLTH----GSSV-NMSGKWFKAIPYNVRK 155 (433)
Q Consensus 85 ~~~a~~lF-~a~~anvqp~SG~~An~av~~ALl--~pGD~Il~~~l~-~GGHlsh----g~~~-~~~g~~~~~~~y~~d~ 155 (433)
.++..+++ +.+.+-. .-||+-||.+++..-- .-.++|+++.-. ||-|.+. |... ++..-...-+|....+
T Consensus 98 Ae~l~~~~p~~~~v~f-~~sGsEAve~AiklAR~~tgr~~ii~~~g~YHG~~d~~l~~~gs~~~~~~~p~~~g~p~~~~~ 176 (429)
T PRK00062 98 AELVIERVPSVEMVRM-VNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGVATLGLPDSPGVPADFAK 176 (429)
T ss_pred HHHHHHHCCCCCEEEE-ECCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999855898777987-187699999999999761188762111465668862056534897544678998899764447
Q ss_pred CCCC---CCHHHHHHHHHHHCC--CEEEE----ECCC--CCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCC-CCC
Q ss_conf 2356---598999999986046--67897----0552--4353637999988641797899186201244320001-232
Q gi|254780349|r 156 EDGL---LDMHEIESLAIEYNP--KLIIV----GGTA--YSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQH-PSP 223 (433)
Q Consensus 156 ~~~~---ID~d~~~~~a~~~kP--klIi~----G~S~--y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~-~~P 223 (433)
+... =|.+.++++++++.- .-||+ |..- .|-+-=++++|++|+++|++|++|.-++ |+=.|..+ +.-
T Consensus 177 ~~~~~~~nd~~~~~~~l~~~~~~iAAvivEPi~g~~G~i~p~~~yl~~lr~lc~~~giLlI~DEV~t-GfRtG~~~a~e~ 255 (429)
T PRK00062 177 NTLTAPYNDLEAVKAAFEEYGDEIACVIVEPVAGNMGCVPPLPGFLEGLRELTDENGALLIFDEVMT-GFRVAYGGAQGY 255 (429)
T ss_pred CEEEECCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCEEECCHHHHHHHHHHHCCCCEEEEEECCCC-CEECCCCHHHCC
T ss_conf 5263057778888999985688656999743237786144888999999999604664799971425-700576435417
Q ss_pred CCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCH--HHC-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
Q ss_conf 200-23567404565225--6744898336205650166--465-43223445566689999999973564899999999
Q gi|254780349|r 224 VPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINS--AIF-PGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIV 297 (433)
Q Consensus 224 l~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~--avf-Pg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv 297 (433)
+.. .|++|. -|.+.| |-|++ ++++ |+.+.+.. .+| -|+-+|.-+..-||+| +|....++. ..+++-
T Consensus 256 ~gv~PDi~t~--gK~lggG~Pi~av-~~~~-eim~~~~~~g~~~~~gTf~gnpla~AAa~a-~L~~l~~~~---l~~~~~ 327 (429)
T PRK00062 256 YGVTPDLTTL--GKVIGGGLPVGAF-GGRR-EIMEQLAPLGPVYQAGTLSGNPLAMAAGLA-TLRLLDQEG---VYETLD 327 (429)
T ss_pred CCCCCCEEEE--CCCCCCCCCEEEE-EEHH-HHHHHHCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHHHCC---HHHHHH
T ss_conf 8998968996--3234798753788-6779-999863758984125878888799999999-999997357---999999
Q ss_pred HHHHHHHHHH----HHCCCCC-CCC-CCCCCEEEECCCCCC------CCHH---HHHHHHHHCCEEEECCCCCCCCCCCC
Q ss_conf 8889999998----6168523-345-888981263166556------7679---99998885671880378998999988
Q gi|254780349|r 298 LNSQALAKKL----QFLGFDI-VSG-GTDNHLMLVDLRSKR------MTGK---RAESILGRVSITCNKNSIPFDPESPF 362 (433)
Q Consensus 298 ~NA~~La~~L----~~~G~~v-v~g-gTd~H~vlvdl~~~~------~~G~---~a~~~Le~~gI~~Nkn~iP~D~~~~~ 362 (433)
+-.+.|.+.| .+.++.. |.| |.--++.+.+-...+ .+.. .....|-+.||.+.- +.+
T Consensus 328 ~~G~~l~~~l~~~~~~~~~~~~v~G~G~m~~i~f~~~~~~~~~~~~~~d~~~~~~~~~~m~~~Gv~~~p--------~~~ 399 (429)
T PRK00062 328 ALTDRLAEGLKEAAEKAGIPLVVNRVGSMFGIFFTDEPVTNYEDAKASDTERFARFFHAMLEEGVYLAP--------SQF 399 (429)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCC--------CCC
T ss_conf 999999999999998779987999657478999648988898998644299999999999978864478--------642
Q ss_pred CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8985122466673079998999999999999960
Q gi|254780349|r 363 ITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 363 ~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
. ...+ +-=+.++|+++.-+.+.+++.
T Consensus 400 ~--~~~l------s~aht~~did~~l~a~~~al~ 425 (429)
T PRK00062 400 E--AGFV------STAHTDEDIEKTLAAAREAFA 425 (429)
T ss_pred C--CCEE------ECCCCHHHHHHHHHHHHHHHH
T ss_conf 4--7110------335899999999999999999
No 328
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.54 E-value=0.011 Score=39.22 Aligned_cols=207 Identities=17% Similarity=0.230 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHCCC---EEEEE-------CCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCCC-CCC-CC
Q ss_conf 89999999860466---78970-------5524353637999988641797899186201244-320001232-200-23
Q gi|254780349|r 162 MHEIESLAIEYNPK---LIIVG-------GTAYSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPSP-VPH-CH 228 (433)
Q Consensus 162 ~d~~~~~a~~~kPk---lIi~G-------~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~P-l~~-AD 228 (433)
.+.+++++++. |. -+|+. +-..+-+-=++++|++|++.|.+|++|.-.+ |+ =.|..|-.- +.- .|
T Consensus 223 ~~~le~~~~~~-~~~iAA~IiEPviqg~GG~~~p~~~yl~~lr~lc~~~giLLI~DEV~t-GfGRtG~~fa~e~~gv~PD 300 (472)
T PRK08742 223 ADALQALFEQS-PGEICALILEPRVQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIAT-GFGRTGTLFACEQAGVMPD 300 (472)
T ss_pred HHHHHHHHHHC-CCCEEEEEECCCCCCCCCEECCCHHHHHHHHHHHHHHCCEEEECCCCC-CCCCCCCCEEECCCCCCCC
T ss_conf 99999999857-886479997157665387056899999999999887296688403301-6871344523124677997
Q ss_pred EEEECCCCCCCC---CCCEEEEECCCCHHHHCCH----HHC-H-HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 567404565225---6744898336205650166----465-4-322344556668999999997356489999999988
Q gi|254780349|r 229 IVTTTTHKSLRG---PRGGLIMTNHADLAKKINS----AIF-P-GLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLN 299 (433)
Q Consensus 229 vvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~----avf-P-g~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~N 299 (433)
+||.+ |.|.| |=|+++.++ ++.+.+-. ..| - .+.+|.-+..-||+++ .+.++. .++++|
T Consensus 301 iv~~a--KgltgGy~Plsav~~~~--eI~~~~~~~~~~~~~~hg~Ty~GnPlacAaala~--L~i~~~------e~l~~~ 368 (472)
T PRK08742 301 LLCLS--KGLTGGFLPLSAVLATQ--QLYDAFLDDSRERAFLHSHSYTGNPLACAAALAT--LDIFAD------DDVIAR 368 (472)
T ss_pred EEEEC--HHHCCCCCCEEEEEECH--HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH--HHHHHH------CCHHHH
T ss_conf 20121--21038877707898769--9997651477666513578999998999999999--999986------559999
Q ss_pred HHHHHHHHHHC-----CCCCCCCCCCCCEEE-ECCCC-C----CCC-----HHHHHHHHHHCCEEEECCCCCCCCCCCCC
Q ss_conf 89999998616-----852334588898126-31665-5----676-----79999988856718803789989999888
Q gi|254780349|r 300 SQALAKKLQFL-----GFDIVSGGTDNHLML-VDLRS-K----RMT-----GKRAESILGRVSITCNKNSIPFDPESPFI 363 (433)
Q Consensus 300 A~~La~~L~~~-----G~~vv~ggTd~H~vl-vdl~~-~----~~~-----G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~ 363 (433)
++.+++.|.+. .++.|..-----+++ +++.. + .++ |.++.+.+-+.|+++.. .
T Consensus 369 ~~~~g~~l~~~~~~l~~~p~V~dVRg~GL~~gvElv~d~~~~~~~~~~~~~~~~~~~~~~~~Gll~r~----~------- 437 (472)
T PRK08742 369 NQPIAARMTQLAAQIGEHPAVADVRQAGMIVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRP----L------- 437 (472)
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEE----C-------
T ss_conf 99999999999996158997898426864999997158765787877789999999999978948985----4-------
Q ss_pred CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 9851224666730799989999999999999602
Q gi|254780349|r 364 TSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 364 ~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
.+-|||.-|-+ .+++|+.++.+.+.++|+.
T Consensus 438 G~~i~~~PPL~----it~~eid~~~~~l~~al~e 467 (472)
T PRK08742 438 GDVLYWMPPYC----VDEAQLALLADTTRHAIDE 467 (472)
T ss_pred CCEEEEECCCC----CCHHHHHHHHHHHHHHHHH
T ss_conf 99999979940----6899999999999999999
No 329
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=97.40 E-value=0.017 Score=37.99 Aligned_cols=286 Identities=14% Similarity=0.182 Sum_probs=146.8
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCC--CE-ECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00679999999999999871886--30-1000016799999999831548748812334484111476654333332201
Q gi|254780349|r 73 GCQYVDDIENIAIERAKKLFNVN--FV-NVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAI 149 (433)
Q Consensus 73 G~~~~d~iE~la~~~a~~lF~a~--~a-nvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~ 149 (433)
+.+ +.++-.-++++.++||+.. |. =.-+-+++.+..++.+.|+.++. + .|+..| +++++|....
T Consensus 43 s~~-f~~i~~~a~~~lr~Ll~iPddY~Vlfl~GGaT~qf~~i~~nLl~~~~-~--------~~~~~G---~fs~kwa~~a 109 (381)
T PRK03080 43 QAP-GKAKLGEAIDGTRELLSLPADYEVGIVPGSDTGAVEMALWSLLGARR-V--------DHLAWE---SFGAKWATDV 109 (381)
T ss_pred CHH-HHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCC-C--------CEEEEC---CHHHHHHHHH
T ss_conf 738-99999999999999958999847999678467999999874557777-7--------278743---1446999999
Q ss_pred -CC-C------CCCCCCCC-CHHHHHHHHHHHCCCEEEEE-CCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHC
Q ss_conf -36-6------58323565-98999999986046678970-552435363799998864179789918620124432000
Q gi|254780349|r 150 -PY-N------VRKEDGLL-DMHEIESLAIEYNPKLIIVG-GTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQ 219 (433)
Q Consensus 150 -~y-~------~d~~~~~I-D~d~~~~~a~~~kPklIi~G-~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~ 219 (433)
.+ . ++.+.+.| |...... ...++++- .+.+.-.+ ...+-+.+..+.++++|++- ..
T Consensus 110 ~~~~~~~~~~v~~a~~g~iP~~~~~~~-----~~d~~~t~NeTi~Gv~~--p~~~~~~~~~~~llv~D~SS-------~i 175 (381)
T PRK03080 110 VKQLKLEDPRVLKADYGELPDLSAVDF-----DVDVVFTWNGTTSGVRV--PNADWIGADREGLTICDATS-------AA 175 (381)
T ss_pred HHHHCCCCCEEEECCCCCCCCHHHCCC-----CCCEEEEECCCEEEEEC--CCCCCCCCCCCCCEEEECHH-------HH
T ss_conf 974366761587057777888123376-----56479873564010874--67677888888627874324-------44
Q ss_pred CCCCCCC--CCEEEECCCCCCCCCCC-EEEEECCCCHHHHCCHHH----CHHHHH-------------HHHHHH-----H
Q ss_conf 1232200--23567404565225674-489833620565016646----543223-------------445566-----6
Q gi|254780349|r 220 HPSPVPH--CHIVTTTTHKSLRGPRG-GLIMTNHADLAKKINSAI----FPGLQG-------------GPFMHS-----I 274 (433)
Q Consensus 220 ~~~Pl~~--ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~i~~av----fPg~qg-------------~~~~~~-----i 274 (433)
+--|++. .|+++++-.|.|.+|-| +++..+. +.-+|++... .|.+.. +-..|+ |
T Consensus 176 ~s~~iD~sk~dviyagaQKnlG~~aGl~vvI~sp-~al~r~~~~~~~r~iP~~l~~~~~~~a~e~~~~~s~~NTPp~f~i 254 (381)
T PRK03080 176 FALPLDWAKLDVYTFSWQKVLGGEGGHGMLILSP-RAVERLESYAPAWPLPKIFRLTKGGKLIENIFKGQTINTPSMLTV 254 (381)
T ss_pred CCCCCCHHHCCEEEEEECCCCCCCCCEEEEEECH-HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 3676785574279987000257877427999769-999888613887788446424557888764653464899618999
Q ss_pred HHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHCCC--CCCCC-CCCCCEEE-ECCCCCCCCH----HHHHHHHHHC
Q ss_conf 899999999735648-99999999888999999861685--23345-88898126-3166556767----9999988856
Q gi|254780349|r 275 AAKAVAFGEALSSEF-RDYAKQIVLNSQALAKKLQFLGF--DIVSG-GTDNHLML-VDLRSKRMTG----KRAESILGRV 345 (433)
Q Consensus 275 aa~aval~Ea~~~~f-~~Ya~qvv~NA~~La~~L~~~G~--~vv~g-gTd~H~vl-vdl~~~~~~G----~~a~~~Le~~ 345 (433)
.-..-.|+=..+..+ .+-.++-.++|+.|-+......+ ..+.. -+.+.+.+ +++.+..... +.+...|++.
T Consensus 255 y~~~~~l~Wl~~~GGl~~~~~rn~~ka~lLY~~id~s~~~~~~v~d~~~RS~~nv~f~~~d~~~~~~~~~~~~~~~l~~e 334 (381)
T PRK03080 255 EDYLDQLDWAKSIGGLDALIARTAANSSVLYDWAEKTPWATPLAADPATRSNTSVCLDFVDPADAQAAFDKALVAKLLRE 334 (381)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999728899999999999999999997088743366884452376489994580554799999999999982
Q ss_pred CEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 718803789989999888985122466673079998999999999999960
Q gi|254780349|r 346 SITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 346 gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
+..++-++ -|. .+.|||+++-.- +..++++.+..||.=+..
T Consensus 335 ~g~~di~g----hR~--~~~GlR~s~y~a----v~~~dv~aL~~~ld~~~~ 375 (381)
T PRK03080 335 NGAVDIGP----YRD--APNGLRIWCGAT----VEPSDVEALTPWLDWAFE 375 (381)
T ss_pred CCEECCCC----CCC--CCCCEEEEECCC----CCHHHHHHHHHHHHHHHH
T ss_conf 98745655----356--898558883277----899999999999999999
No 330
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=97.38 E-value=0.018 Score=37.80 Aligned_cols=297 Identities=15% Similarity=0.116 Sum_probs=150.8
Q ss_pred HHHHHHHHHHHHHCCC-CCEECCCHHHHHHHHHHHHHH--HCCCCEEEECCCCCCCCC-C--CCCC---CCCCCCCCCCC
Q ss_conf 9999999999987188-630100001679999999983--154874881233448411-1--4766---54333332201
Q gi|254780349|r 79 DIENIAIERAKKLFNV-NFVNVQSHSGSQMNQGVFLAL--MHPGDSFMGLSLDSGGHL-T--HGSS---VNMSGKWFKAI 149 (433)
Q Consensus 79 ~iE~la~~~a~~lF~a-~~anvqp~SG~~An~av~~AL--l~pGD~Il~~~l~~GGHl-s--hg~~---~~~~g~~~~~~ 149 (433)
++|...-|..+++|.+ +.+-. .-||+-|+|.++-.- .---|+|+.+.=..=||. + ++.. .++..-..-=+
T Consensus 93 e~Ei~~Aell~~~~p~~e~vrf-vnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gv 171 (432)
T COG0001 93 ELEVELAELLIERVPSIEKVRF-VNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGV 171 (432)
T ss_pred HHHHHHHHHHHHHCCCCCEEEE-ECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCC
T ss_conf 7899999999986586508998-606408999999999876479759997288888711878426767555789999999
Q ss_pred CCCCCCCCCC---CCHHHHHHHHHHHCCC--EEEEEC--CC----CCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHH
Q ss_conf 3665832356---5989999999860466--789705--52----43536379999886417978991862012443200
Q gi|254780349|r 150 PYNVRKEDGL---LDMHEIESLAIEYNPK--LIIVGG--TA----YSRVWDWERFRSIADSIGAYLMADISHISGLVVGG 218 (433)
Q Consensus 150 ~y~~d~~~~~---ID~d~~~~~a~~~kPk--lIi~G~--S~----y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g 218 (433)
+-.+-.++-. =|.+.++++.++.... -||+.. +. -|.+-=.+.+|++|++.|++|++|.-++.=-++-|
T Consensus 172 p~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~g 251 (432)
T COG0001 172 PADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALG 251 (432)
T ss_pred CHHHHCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCC
T ss_conf 73453447884579999999999876896799995424678898989878999999999971948998622120454776
Q ss_pred CCCCCCCC-CCEEEECCCCCCCCCC-CEEEEECCCCHHHHCCHHHCHHHHHHHH---HHHHHHHHHHHHHHHCH--HHHH
Q ss_conf 01232200-2356740456522567-4489833620565016646543223445---56668999999997356--4899
Q gi|254780349|r 219 QHPSPVPH-CHIVTTTTHKSLRGPR-GGLIMTNHADLAKKINSAIFPGLQGGPF---MHSIAAKAVAFGEALSS--EFRD 291 (433)
Q Consensus 219 ~~~~Pl~~-ADvvt~sTHKtl~GPr-gGiI~~~~~e~~~~i~~avfPg~qg~~~---~~~iaa~aval~Ea~~~--~f~~ 291 (433)
-.|.=+.- .|+.|. -|-+.|-= -|.+-.+ .|+.+.+.-.= |-+|+|.. .-.++|-..++.+..+. .++.
T Consensus 252 Gaq~~~gi~PDlttl--GKiIGGGlP~ga~gGr-~eiM~~~~p~g-~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~ 327 (432)
T COG0001 252 GAQGYYGVEPDLTTL--GKIIGGGLPIGAFGGR-AEIMEQLAPLG-PVYQAGTLSGNPLAMAAGLATLEELMTEEGVYER 327 (432)
T ss_pred CCCCCCCCCCCHHHH--HHHHCCCCCEEEECCH-HHHHHHHCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 420100869633322--2440477520112569-99996327788-7645677788689999999999998736518999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCCEEEECCCCC--------CCC-HHHHHHHHHHCCEEEECCCCCCCCCC
Q ss_conf 99999988899999986168523345--88898126316655--------676-79999988856718803789989999
Q gi|254780349|r 292 YAKQIVLNSQALAKKLQFLGFDIVSG--GTDNHLMLVDLRSK--------RMT-GKRAESILGRVSITCNKNSIPFDPES 360 (433)
Q Consensus 292 Ya~qvv~NA~~La~~L~~~G~~vv~g--gTd~H~vlvdl~~~--------~~~-G~~a~~~Le~~gI~~Nkn~iP~D~~~ 360 (433)
..++--+-+.-|.+.+.+.|+++... |.---++.-+.... +.. -..+-+.|-+.||.+- | +
T Consensus 328 l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~----p----s 399 (432)
T COG0001 328 LDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLA----P----S 399 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCC----C----C
T ss_conf 9999999999999999983998588620425899955899888999986356999999999996882347----7----5
Q ss_pred CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 888985122466673079998999999999999960
Q gi|254780349|r 361 PFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 361 ~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
.+.. ..++.-..++|++..-+-+.++++
T Consensus 400 ~~ea--------~flS~ahte~di~~~~~a~~~~~~ 427 (432)
T COG0001 400 QFEA--------GFLSTAHTEEDIDRTLEAADEAFK 427 (432)
T ss_pred CCCC--------EEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 5554--------552004689999999999999999
No 331
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=97.11 E-value=0.033 Score=35.89 Aligned_cols=329 Identities=13% Similarity=0.121 Sum_probs=168.7
Q ss_pred HHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHCCC--CCEECCCHHH-HHHH
Q ss_conf 83888104301029899998305102886579888-753360067999999999999987188--6301000016-7999
Q gi|254780349|r 33 NDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPS-KRYYGGCQYVDDIENIAIERAKKLFNV--NFVNVQSHSG-SQMN 108 (433)
Q Consensus 33 ~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg-~ryy~G~~~~d~iE~la~~~a~~lF~a--~~anvqp~SG-~~An 108 (433)
++.+|.-|.--.+++.|++-....|-|--..|.-- .--+. ...+.+|-.-+.++.++||+. +|.-+=...| +.-+
T Consensus 3 ~~~~NF~aGPa~LP~~Vl~~~~~e~~~~~~~G~simE~SHR-s~~f~~i~~~a~~~lr~Ll~iPd~Y~VlflqGGAt~qf 81 (364)
T PRK12462 3 RNQLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHR-SSWFSSLLAQAQADLRDLLGIPDEYGVVFLQGGSSLQF 81 (364)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCC-CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH
T ss_conf 67621588864489999999999986056897027850668-88899999999999999858999827999568178999
Q ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH---HHCCCEEEEECCCCC
Q ss_conf 99999831548748812334484111476654333332201366583235659899999998---604667897055243
Q gi|254780349|r 109 QGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAI---EYNPKLIIVGGTAYS 185 (433)
Q Consensus 109 ~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~---~~kPklIi~G~S~y~ 185 (433)
.++-+-|++++++.. +--.-|+-|...... ..++..+......++. +|..+-.... ......+..-.-...
T Consensus 82 ~~ip~Nll~~~~~~a--~y~~tG~WS~kA~~E-A~k~~~~~~~~~~~~~---~~~~iP~~~~~~~~~~~~y~h~t~NeTi 155 (364)
T PRK12462 82 SMIPMNFSRPGAAAP--EYVTTGYWSRKAIGE-ASRVAAMRVVWDGAAS---GYRTLPSLAALDWDARAPFRHYVSNETV 155 (364)
T ss_pred HHHHHHCCCCCCCCC--EEEECCHHHHHHHHH-HHHHCCEEEEECCCCC---CCCCCCCHHHCCCCCCCCEEEECCCCCC
T ss_conf 999863756788523--499627868999999-9975891486235668---8864677432277888446986257742
Q ss_pred CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCCCCCCC-EEEEECCCCHHHHCCHHHC
Q ss_conf 53637999988641797899186201244320001232200--23567404565225674-4898336205650166465
Q gi|254780349|r 186 RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSLRGPRG-GLIMTNHADLAKKINSAIF 262 (433)
Q Consensus 186 ~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~i~~avf 262 (433)
.-+.| .+..+.-+..|++|+|- ..+--|++. .|+++.+-.|.| ||-| .+++.|+ ++-++..+.+
T Consensus 156 ~Gvq~---~~~~~~~~~plV~DmSS-------~~lsrpiD~s~~~viYagaQKN~-G~aG~tvvIir~-dll~~~~~~i- 222 (364)
T PRK12462 156 EGLQF---PDAADLPDSPLIADMSS-------DFMSRPFDVRAYGMVYAHAQKNL-GPAGVTVAIIRR-ALLERVPDTL- 222 (364)
T ss_pred CCEEE---CCCCCCCCCEEEEECCH-------HHHCCCCCHHHEEEEEEECCCCC-CCCCEEEEEECH-HHHCCCCCCC-
T ss_conf 33241---56789999738873460-------65167656779038998621125-666618999879-9961622038-
Q ss_pred HHHHH------------HHHHHHHHHHHHHHHHHHCH-HHHH-HHHHHHHHHHHHHHHHHHC-CCCC--CCCCCCCCEEE
Q ss_conf 43223------------44556668999999997356-4899-9999998889999998616-8523--34588898126
Q gi|254780349|r 263 PGLQG------------GPFMHSIAAKAVAFGEALSS-EFRD-YAKQIVLNSQALAKKLQFL-GFDI--VSGGTDNHLML 325 (433)
Q Consensus 263 Pg~qg------------~~~~~~iaa~aval~Ea~~~-~f~~-Ya~qvv~NA~~La~~L~~~-G~~v--v~ggTd~H~vl 325 (433)
|.+.. .|-.-.|--....|+-..+. .+-+ -.++-.+.|+.|-..+.+. +|-. +.-...+.+.+
T Consensus 223 P~~ldy~~~~~~~S~yNTPp~f~Iy~~~lvl~Wl~~~~GGl~~~~~~n~~Ka~~LY~~iD~s~~fy~~~v~~~~RS~mNv 302 (364)
T PRK12462 223 PPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNV 302 (364)
T ss_pred CCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCEEE
T ss_conf 64021888986088788942699999999999998621355899999999999999999718787668898465885884
Q ss_pred -ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf -316655676799999888567188037899899998889851224666730799989999999999999
Q gi|254780349|r 326 -VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQI 394 (433)
Q Consensus 326 -vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~ 394 (433)
..+.+..++. .+-+.+++.||.-=| + .|+ -.|||++. .-+|..++++.++++|.+=
T Consensus 303 ~F~~~~~~l~~-~Fl~~a~~~Gl~~lk----G-hRs---vGG~RaSl----YNa~~~e~V~~L~~fM~~F 359 (364)
T PRK12462 303 AFRFRQPRLDT-LFKEQSTEAGFCGLS----G-HRS---IGGIRASL----YNAVSEQAVSRLCAFLKDF 359 (364)
T ss_pred EEECCCHHHHH-HHHHHHHHCCCCCCC----C-CCC---CCCCEEEC----CCCCCHHHHHHHHHHHHHH
T ss_conf 68149766789-999999987986651----8-871---14526771----1799999999999999999
No 332
>TIGR01814 kynureninase kynureninase; InterPro: IPR010111 This entry describes kynureninase, it is a pyridoxal-5'-phosphate (PLP)-dependent enzyme that catalyzes the hydrolytic cleavage of L-kynurenine to anthranilic acid and L-alanine. Kynurinine is a Trp breakdown product and a precursor for NAD. This reaction is a key step in the catabolism of L-tryptophan by Pseudomonas fluorescens and some other bacteria (1). In fungi and vertebrates, kynurenine is first hydroxylated to 3-hydroxykynurenine, which is the preferred substrate of kynureninase in those organisms, resulting in 3-hydroxyanthranilate and L-alanine. Sequence alignment with other PLP-dependent enzymes indicated that kynureninase is in subgroup IVa of the aminotransferases, along with nifS, CsdB, and serine-pyruvate aminotransferase, which suggests that kynureninase has an aminotransferase fold .; GO: 0030170 pyridoxal phosphate binding, 0030429 kynureninase activity, 0006569 tryptophan catabolic process, 0009435 NAD biosynthetic process, 0005737 cytoplasm.
Probab=96.97 E-value=0.026 Score=36.62 Aligned_cols=284 Identities=17% Similarity=0.175 Sum_probs=165.8
Q ss_pred HHHHHHHHHCCCCCEECCCHHHHHHHHHH-HHHHHCC-----CCEEEECCCCCCCCCC--CCCCC--CCCCCCCCCCCCC
Q ss_conf 99999998718863010000167999999-9983154-----8748812334484111--47665--4333332201366
Q gi|254780349|r 83 IAIERAKKLFNVNFVNVQSHSGSQMNQGV-FLALMHP-----GDSFMGLSLDSGGHLT--HGSSV--NMSGKWFKAIPYN 152 (433)
Q Consensus 83 la~~~a~~lF~a~~anvqp~SG~~An~av-~~ALl~p-----GD~Il~~~l~~GGHls--hg~~~--~~~g~~~~~~~y~ 152 (433)
.+.+..+.+-+|+--+|=--.-++.|+-. +.++.+| -.+-..+. +.+-=-| |.-.. ...|+..+..--.
T Consensus 90 ~~~~l~~~vlvA~~~evv~~nslT~NLh~ll~~Fy~pqredt~~R~kIL~-E~~aFPSD~Ya~e~Q~~L~g~~~e~~l~~ 168 (444)
T TIGR01814 90 ALLKLLADVLVAQEKEVVVMNSLTVNLHKLLASFYKPQREDTEKRTKILL-EAKAFPSDLYAIESQLRLHGLEPEEHLVQ 168 (444)
T ss_pred HHHCCCCHHEECCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCEEEEE-CCCCCCHHHHHHHHHHHCCCCCCCCCEEE
T ss_conf 35314310011166536630043388999999870754247733457565-16788727999999974679873441267
Q ss_pred CCCC--CCCCCHHHHHHHHHHHCCCEE--EE-ECCCCC-CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC
Q ss_conf 5832--356598999999986046678--97-055243-53637999988641797899186201244320001232200
Q gi|254780349|r 153 VRKE--DGLLDMHEIESLAIEYNPKLI--IV-GGTAYS-RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH 226 (433)
Q Consensus 153 ~d~~--~~~ID~d~~~~~a~~~kPklI--i~-G~S~y~-~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ 226 (433)
++++ ++.|..+...+.++...+.+- ++ |-..|. ..+|++++...|++-||++++|-||..|-| |+.-
T Consensus 169 ~~p~~~e~tLr~~di~~~iE~~~D~~A~v~l~~V~Y~TGQ~fDm~~~t~~a~~~~~~~vfDLAHa~~Nv-------Pl~L 241 (444)
T TIGR01814 169 VEPREAEETLRLEDILDTIEKNGDEIALVLLSGVQYYTGQLFDMRAITRAAHKRGAIVVFDLAHAVANV-------PLDL 241 (444)
T ss_pred EEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCC-------CCCC
T ss_conf 742234421107889999985389789998478443023678999999997089765996022211076-------3225
Q ss_pred ----CCEEEECCCCCCCCCCCE----EEEECCC---------------------CHHHHCCH--HHCHHHHHHHHHHHHH
Q ss_conf ----235674045652256744----8983362---------------------05650166--4654322344556668
Q gi|254780349|r 227 ----CHIVTTTTHKSLRGPRGG----LIMTNHA---------------------DLAKKINS--AIFPGLQGGPFMHSIA 275 (433)
Q Consensus 227 ----ADvvt~sTHKtl~GPrgG----iI~~~~~---------------------e~~~~i~~--avfPg~qg~~~~~~ia 275 (433)
.|+=.=.|+|-|=-+-|+ +|--+.. +..=.+.. +-| .|++|+...+|
T Consensus 242 H~w~VDFA~WC~YKYLNa~pg~v~~~F~h~~~~~~~~~~~~lwWwh~~~~rF~m~~~~~~~~g~~~~--~~snPpv~~~a 319 (444)
T TIGR01814 242 HDWGVDFACWCSYKYLNASPGIVVGAFVHEKHAHEELPRLALWWWHARPKRFKMENTLVLRPGAAAF--RLSNPPVLSVA 319 (444)
T ss_pred CCCCCCEEEECCCCCCCCHHHHHHHHHCCHHHHCCCCHHCCCCCCCCCCHHHCCCHHCCCCCCCHHH--HHCCCCHHHHH
T ss_conf 7888877788466011611355512310224411420002553245763432441102556420243--30587688898
Q ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-----C-------------CCCCCC--C-CC-CCEEEECCCCCCC
Q ss_conf 99999999735648999999998889999998616-----8-------------523345--8-88-9812631665567
Q gi|254780349|r 276 AKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL-----G-------------FDIVSG--G-TD-NHLMLVDLRSKRM 333 (433)
Q Consensus 276 a~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-----G-------------~~vv~g--g-Td-~H~vlvdl~~~~~ 333 (433)
++--+|.=.- +.=+..|-+-+-.|-..|.+. + +.|+|- . -. ||+ =+...+...
T Consensus 320 ~L~sSL~~F~----q~~m~~lRkKS~~LTdyl~~L~~~~~~~~~~~rie~~k~~~~I~TP~~~~~Rgcql-s~~~~~~~~ 394 (444)
T TIGR01814 320 ALRSSLDLFD----QASMEALRKKSLLLTDYLEELIKARCAYKKALRIETLKLVLTIITPEDHAQRGCQL-SLEFPSDRK 394 (444)
T ss_pred HHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCCCCCCCEE-EEEECCCCC
T ss_conf 8885477663----05848999999888778999998522585123203578568973788812155437-897078887
Q ss_pred CHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCC-CHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 6799999888567188037899899998889851224-6667307999899999999999996
Q gi|254780349|r 334 TGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLG-TPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 334 ~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlG-T~aiTtrG~~e~em~~iA~li~~~L 395 (433)
....+-+.|..-|.++.+ | .||+||+- ||==+| | .|+-+.-+.+.+++
T Consensus 395 ~~~~~~~~L~~r~vv~D~-------R---~P~vIR~APvpLYn~--F--~DVy~~V~~L~~~~ 443 (444)
T TIGR01814 395 EDAAVFQALIKRGVVIDF-------R---EPSVIRLAPVPLYNT--F--VDVYDAVEVLEEIL 443 (444)
T ss_pred HHHHHHHHHHHCCCEEEC-------C---CCCCEEEECCCCCCC--E--EHHHHHHHHHHHHH
T ss_conf 035789999867963302-------5---888327627645365--5--04989999999994
No 333
>KOG1405 consensus
Probab=96.95 E-value=0.028 Score=36.38 Aligned_cols=321 Identities=20% Similarity=0.270 Sum_probs=170.2
Q ss_pred HHHHCCCCCCCCCCCCHHHHHH-----HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHH
Q ss_conf 9983888104301029899998-----30510288657988875336006799999999999998718863010000167
Q gi|254780349|r 31 RQNDEIQLIASENIVSRAVLEA-----QGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGS 105 (433)
Q Consensus 31 rq~~~l~LiASEN~~S~~v~~~-----l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~ 105 (433)
-|-.+++|= |-.|.-..+ ..+.|.||.|.|- |.+.++.+.+-.-...-|-+ |.+++-. ..||+
T Consensus 83 sQIsSvplG----Yn~P~LvK~a~~p~~~~~lvnRPALg~-----fP~kd~~~~l~~~ll~~APK--G~~~v~t-m~cGs 150 (484)
T KOG1405 83 SQISSVPLG----YNNPALVKAAQQPQNATMLVNRPALGN-----FPPKDFAEKLRQSLLSIAPK--GQKQVIT-MLCGS 150 (484)
T ss_pred HHHCCCCCC----CCCHHHHHHHCCHHHHHHHHCCCCCCC-----CCHHHHHHHHHHHHHHHCCC--HHHHHHH-HHCCC
T ss_conf 565015667----898899987348488888706610157-----88066899999998764854--0777887-75056
Q ss_pred HHHHHHHHHH------HCCCC----------------------EEEECCCCCCCC----C--CCCCCC---CCCC-----
Q ss_conf 9999999983------15487----------------------488123344841----1--147665---4333-----
Q gi|254780349|r 106 QMNQGVFLAL------MHPGD----------------------SFMGLSLDSGGH----L--THGSSV---NMSG----- 143 (433)
Q Consensus 106 ~An~av~~AL------l~pGD----------------------~Il~~~l~~GGH----l--shg~~~---~~~g----- 143 (433)
-||--+|.+. -++|+ .||++.-+.-|. | ||..++ .+-.
T Consensus 151 ~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~SKpIHKldiPaFdWPi 230 (484)
T KOG1405 151 CANENAYKTAFIWYRAKERGQAGFSAEELESCMINQAPGAPDLSVLSFKGAFHGRTFGSLSTTHSKPIHKLDIPAFDWPI 230 (484)
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 53388899999998751378899777888888705899998645554034104643013333457664006888888977
Q ss_pred CCCCCCCCCCCCC---CCCC---CHHHHHHHHHHHC----CC-EEEE------ECCCCCCCCCHHHHHHHHHHCCCEEEE
Q ss_conf 3322013665832---3565---9899999998604----66-7897------055243536379999886417978991
Q gi|254780349|r 144 KWFKAIPYNVRKE---DGLL---DMHEIESLAIEYN----PK-LIIV------GGTAYSRVWDWERFRSIADSIGAYLMA 206 (433)
Q Consensus 144 ~~~~~~~y~~d~~---~~~I---D~d~~~~~a~~~k----Pk-lIi~------G~S~y~~~~d~~~l~eIa~~~ga~l~~ 206 (433)
.-|-...|++|+. +..= =++++|+++.+++ |- -||+ |+-.+--|.=|..+|+|+.++|..+++
T Consensus 231 A~fP~ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fiv 310 (484)
T KOG1405 231 APFPRYKYPLDENVAENKKEDQGCLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIV 310 (484)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEE
T ss_conf 88743458745656551221366799999999997603797579986511025788668989999999999864958996
Q ss_pred CCCCHHHHHHHHCCCC---CCCC-CCEEEECCCCCCCCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8620124432000123---2200-23567404565225674489833620565016646543223445566689999999
Q gi|254780349|r 207 DISHISGLVVGGQHPS---PVPH-CHIVTTTTHKSLRGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFG 282 (433)
Q Consensus 207 D~aH~~GLIa~g~~~~---Pl~~-ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~ 282 (433)
|.-++.|=--|+.+.. -++. .|+||+|---. -|| -+. ++++.-.----+|..-.|.|--+-++...+.
T Consensus 311 DEVQTGgGaTGk~WaHehw~l~~PpD~vTFSKK~q----~gG-ffh-~~~frpn~pYrifNTWmGdP~k~lll~~vv~-- 382 (484)
T KOG1405 311 DEVQTGGGATGKFWAHEHWNLDSPPDVVTFSKKFQ----TGG-FFH-DEEFRPNEPYRIFNTWMGDPSKNLLLEEVVQ-- 382 (484)
T ss_pred EEEECCCCCCCCEEEEHHCCCCCCCCCEEHHHHHH----CCC-CCC-CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHH--
T ss_conf 40000788667543202038999951011025552----276-424-7334878447876543078588899999999--
Q ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHCC----------CCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECC
Q ss_conf 97356489999999988899999986168----------52334588898126316655676799999888567188037
Q gi|254780349|r 283 EALSSEFRDYAKQIVLNSQALAKKLQFLG----------FDIVSGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKN 352 (433)
Q Consensus 283 Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G----------~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn 352 (433)
|... +..++|++...+.|...= ++-+.| .--.+.+|+.+-.+ -.+.-..+...|+-+.-+
T Consensus 383 ~I~~-------~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RG--rGTF~a~d~ps~~~-Rdk~i~~~~~nGv~~GGC 452 (484)
T KOG1405 383 EIKR-------EDLLNNVAHVGKALLKGLLELQAKYPGKINNLRG--RGTFIAWDCPSGSI-RDKLILIARLNGVNLGGC 452 (484)
T ss_pred HHHH-------HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCC--CCEEEEEECCCHHH-HHHHHHHHHHCCCEECCC
T ss_conf 9858-------8899889999999998899998868425542456--63279973898178-899999998769421465
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 8998999988898512246667307999899999999999996
Q gi|254780349|r 353 SIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 353 ~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
+ | + .||+- |.++ +.+.+..-+-+++.++|
T Consensus 453 g---~-~------siRfR-PsLv---f~~~Ha~i~l~~~~k~l 481 (484)
T KOG1405 453 G---D-K------SIRFR-PSLV---FRKHHADIFLDIFDKIL 481 (484)
T ss_pred C---C-C------EEEEC-CCEE---EHHHHHHHHHHHHHHHH
T ss_conf 4---2-0------25403-3201---14666889999999986
No 334
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase; InterPro: IPR004631 4-aminobutyrate aminotransferase eukaryotic (2.6.1.19 from EC) is a class III pyridoxal-phosphate-dependent aminotransferase. The enzyme catalyses the conversion of 4-aminobutanoate and 2-oxoglutarate into succinate semialdehyde and L-glutamate. The degree of sequence difference between this set and known bacterial examples is greater than the distance between either set the most similar enzyme with distinct function, and so the prokaryotic and eukaryotic sets have been placed into separate families. This family describes known eukaryotic examples of the enzyme. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.; GO: 0003867 4-aminobutyrate transaminase activity, 0009448 gamma-aminobutyric acid metabolic process.
Probab=96.93 E-value=0.0049 Score=41.71 Aligned_cols=277 Identities=17% Similarity=0.183 Sum_probs=147.1
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC--CCCCEECCCHHHHHHHHHHHHHH------HCCC--CE-
Q ss_conf 3051028865798887533600679999999999999871--88630100001679999999983------1548--74-
Q gi|254780349|r 53 QGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLF--NVNFVNVQSHSGSQMNQGVFLAL------MHPG--DS- 121 (433)
Q Consensus 53 l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF--~a~~anvqp~SG~~An~av~~AL------l~pG--D~- 121 (433)
.+|.|.||.|.|-==.| ++...+.+=+.+.- |++++-.++ ||+.||-.+|.+. -++| ++
T Consensus 89 ~a~~LinRPALGnfp~~---------~l~~~~~~g~~k~aPKg~~~v~~~~-aG~dane~AfK~af~yYr~~~RGGp~~~ 158 (469)
T TIGR00699 89 MATTLINRPALGNFPSK---------DLAKILKSGILKVAPKGQDSVYRAM-AGSDANELAFKAAFMYYRSKQRGGPERD 158 (469)
T ss_pred HHHHHHCCCCCCCCCHH---------HHHHHHCCCCHHHCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 57886447301467667---------9999854881232452103011446-6642678999999999983589888753
Q ss_pred ---------------------EEECCCCCCCCC------CCCCCC---CC-C----CCCCCCCCCCCCCC--------CC
Q ss_conf ---------------------881233448411------147665---43-3----33322013665832--------35
Q gi|254780349|r 122 ---------------------FMGLSLDSGGHL------THGSSV---NM-S----GKWFKAIPYNVRKE--------DG 158 (433)
Q Consensus 122 ---------------------Il~~~l~~GGHl------shg~~~---~~-~----g~~~~~~~y~~d~~--------~~ 158 (433)
||++--..=|.| ||.+++ .+ + ---|=..-||+++. ..
T Consensus 159 Fs~eE~~s~m~N~~PG~P~~siLSF~~aFHGRlfGsLsTT~SKpiHKlD~PaF~WP~A~FP~LkYPLeE~~~~N~~Ee~r 238 (469)
T TIGR00699 159 FSEEENESCMVNQAPGSPDLSILSFKAAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVEENAKEEQR 238 (469)
T ss_pred CCHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 11788776431687558507888523431034444200034776031786577746777876678702325754558889
Q ss_pred CCCHHHHHHHHHHH-CCCEE----EE------ECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCC---CCCC
Q ss_conf 65989999999860-46678----97------05524353637999988641797899186201244320001---2322
Q gi|254780349|r 159 LLDMHEIESLAIEY-NPKLI----IV------GGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQH---PSPV 224 (433)
Q Consensus 159 ~ID~d~~~~~a~~~-kPklI----i~------G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~---~~Pl 224 (433)
+ ++++|++++++ +||-. |+ |+-.--=+.=|.+||+|++++++..++|.-|+-+=--|+++ .=-|
T Consensus 239 C--L~~vE~L~~~~~~pkrtVaA~IvEPIQSEGGDNHAS~~Ff~KLr~i~~k~~v~FivDEVQTGvGaTGklWAHe~W~L 316 (469)
T TIGR00699 239 C--LEEVEDLIKKWHKPKRTVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKLWAHEHWNL 316 (469)
T ss_pred H--HHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 9--99999999731798615888886243478885343378889999999885956899645508788633123002741
Q ss_pred CC-CCEEEECCCCCCCCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Q ss_conf 00-23567404565225674489833620565016646543223445566689999999973564899999999888999
Q gi|254780349|r 225 PH-CHIVTTTTHKSLRGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQAL 303 (433)
Q Consensus 225 ~~-ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~L 303 (433)
++ +|+||+|=- -|.|=++..++++-=-=---.|-.=.|-|--+-|++--+. | .+ =+....||-.-=..|
T Consensus 317 ~~P~D~vtFSKK-----~qtAGyFFH~~~lrPn~pYr~FNTW~GdP~r~l~~~~i~~--e-I~--~~~L~~n~~~~Gd~L 386 (469)
T TIGR00699 317 DDPPDMVTFSKK-----FQTAGYFFHDPALRPNKPYRQFNTWMGDPSRALILREIIQ--E-IK--RKDLLNNVAAVGDYL 386 (469)
T ss_pred CCCCCCEEECHH-----HHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH--H-HH--HHHHHHHHHHHHHHH
T ss_conf 113850220456-----4127642367356888440003544577889999998887--6-42--257788899876788
Q ss_pred HHHHHHC------CCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECC
Q ss_conf 9998616------852334588898126316655676799999888567188037
Q gi|254780349|r 304 AKKLQFL------GFDIVSGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKN 352 (433)
Q Consensus 304 a~~L~~~------G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn 352 (433)
-..|.+. -+.=|-|.=.-=-+-+|+-+.. -=.+.-..+...||.+.=+
T Consensus 387 y~GLe~L~~~YP~~~~nlRGKGrGTFiawD~p~~a-~Rd~l~~~~r~~Gvn~GGc 440 (469)
T TIGR00699 387 YTGLEDLQKKYPEKVQNLRGKGRGTFIAWDTPDEA-KRDKLLLKARLNGVNIGGC 440 (469)
T ss_pred HHHHHHHHHHCCHHHHCCCCCCCCCEEECCCCCHH-HHHHHHHHHCCCCEEECCC
T ss_conf 99899999750134403446764215740498878-8899999622382576265
No 335
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=96.58 E-value=0.084 Score=33.09 Aligned_cols=284 Identities=18% Similarity=0.165 Sum_probs=137.8
Q ss_pred HHHHHHHCCC---CCEECCCHHHHHHHHHHHHHH-H-CCCCEEEECCCCCCCCCCCC------CCC----CCCC--CCCC
Q ss_conf 9999987188---630100001679999999983-1-54874881233448411147------665----4333--3322
Q gi|254780349|r 85 IERAKKLFNV---NFVNVQSHSGSQMNQGVFLAL-M-HPGDSFMGLSLDSGGHLTHG------SSV----NMSG--KWFK 147 (433)
Q Consensus 85 ~~~a~~lF~a---~~anvqp~SG~~An~av~~AL-l-~pGD~Il~~~l~~GGHlshg------~~~----~~~g--~~~~ 147 (433)
.|+..+++-. +.+-. ..||+-||-+++..- . .-...|+++.-..=|. |+| ++. .+.. -...
T Consensus 105 ae~L~~~~p~~~~~~~~f-~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~-T~galslT~~~~~~~~~~~~~~~~v~ 182 (447)
T COG0160 105 AEKLTALAPGSGLKKVFF-GNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGR-TLGALSLTGSKPPYKAGFGPLPPGVY 182 (447)
T ss_pred HHHHHHHCCCCCCCEEEE-CCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCC-CHHHHHHCCCCCCCCCCCCCCCCCEE
T ss_conf 999997588656776995-6883778999999999985898489978865563-26668754576653357889999858
Q ss_pred CCCCCCCCCC---------CCCCHHHHHHHHHH-----HCCCEEEEE------CCCCCCCCCHHHHHHHHHHCCCEEEEC
Q ss_conf 0136658323---------56598999999986-----046678970------552435363799998864179789918
Q gi|254780349|r 148 AIPYNVRKED---------GLLDMHEIESLAIE-----YNPKLIIVG------GTAYSRVWDWERFRSIADSIGAYLMAD 207 (433)
Q Consensus 148 ~~~y~~d~~~---------~~ID~d~~~~~a~~-----~kPklIi~G------~S~y~~~~d~~~l~eIa~~~ga~l~~D 207 (433)
.+||+.-.-. +.-..+.+++.+.. .+|.-||+. +-.-+-.-=++++++||+++|.++++|
T Consensus 183 ~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~D 262 (447)
T COG0160 183 HVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIAD 262 (447)
T ss_pred EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 81688655675556635556899999999987404787754699984210789974798999999999999819889995
Q ss_pred CCCHHHHHHHHCCCCCCCC----CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHH
Q ss_conf 6201244320001232200----23567404565225--67448983362056501664654322344556668999999
Q gi|254780349|r 208 ISHISGLVVGGQHPSPVPH----CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAF 281 (433)
Q Consensus 208 ~aH~~GLIa~g~~~~Pl~~----ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval 281 (433)
.-|+ |+=-.|-+= -+++ .|+||.+ |.+.| |=++++ ++ +|+.+ ....-+-++-+|-.+...||+|+-
T Consensus 263 EVQt-G~GRTG~~f-a~E~~gv~PDivt~a--K~ig~G~Pl~avv-~r-~ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL- 334 (447)
T COG0160 263 EVQT-GFGRTGKMF-AFEHFGVEPDIVTLA--KSLGGGLPLSAVV-GR-AEIMD-WPPGGHGGTFGGNPVACAAALAVL- 334 (447)
T ss_pred CCCC-CCCCCCCCH-HHHHCCCCCCEEEEC--CCCCCCCCEEEEE-CC-HHHCC-CCCCCCCCCCCCCHHHHHHHHHHH-
T ss_conf 6655-888662601-224209998789853--3345787206774-45-77601-477654777786989999999999-
Q ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCCC----CCCCCEEEECCC-CCCCCHHH---HHHHHHHCCE
Q ss_conf 99735648999999998889999998616------8523345----888981263166-55676799---9998885671
Q gi|254780349|r 282 GEALSSEFRDYAKQIVLNSQALAKKLQFL------GFDIVSG----GTDNHLMLVDLR-SKRMTGKR---AESILGRVSI 347 (433)
Q Consensus 282 ~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~------G~~vv~g----gTd~H~vlvdl~-~~~~~G~~---a~~~Le~~gI 347 (433)
|..+.+ ..++||+.+.+.|.++ -+++++. |--.-.=+++-+ .+.-+... +...+-+.|+
T Consensus 335 -~vie~e------~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Gl 407 (447)
T COG0160 335 -DVIEEE------NLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGL 407 (447)
T ss_pred -HHHHHC------CHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf -999874------2999999999999999999986467442124465078999833787789999999999999998698
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 88037899899998889851224666730799989999999999999602
Q gi|254780349|r 348 TCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 348 ~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
++-... ...+-|||=-|-. +.++++.+..+++.++|..
T Consensus 408 il~~~G--------~~~nviRi~PPL~----is~e~~d~~l~il~~al~~ 445 (447)
T COG0160 408 LLLTCG--------PHGNVLRILPPLT----ISDEELDEGLDILEEALKE 445 (447)
T ss_pred EEECCC--------CCCCEEEEECCCC----CCHHHHHHHHHHHHHHHHH
T ss_conf 885457--------8786799828954----3899999999999999985
No 336
>PRK05355 phosphoserine aminotransferase; Provisional
Probab=96.49 E-value=0.095 Score=32.71 Aligned_cols=316 Identities=16% Similarity=0.177 Sum_probs=158.0
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC----CCCCCCCCHHHHHHHHHHHHHHHHHCCCC--CEECCCHH-HHHHH
Q ss_conf 8810430102989999830510288657988----87533600679999999999999871886--30100001-67999
Q gi|254780349|r 36 IQLIASENIVSRAVLEAQGSILTNKYAEGYP----SKRYYGGCQYVDDIENIAIERAKKLFNVN--FVNVQSHS-GSQMN 108 (433)
Q Consensus 36 l~LiASEN~~S~~v~~~l~S~l~nkyaeG~p----g~ryy~G~~~~d~iE~la~~~a~~lF~a~--~anvqp~S-G~~An 108 (433)
.|.-|.--.+++.|++-....|-|--..|.- -.| ...+..|-.-+++..++||+.. |--+=... ++...
T Consensus 5 ~NF~aGPa~LP~~Vl~~~~~e~~~~~g~G~silEiSHR----s~~f~~i~~~a~~~lr~Ll~iPd~YeVlflqGGat~qF 80 (360)
T PRK05355 5 YNFSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHR----SKEFIAVAEEAEADLRELLNIPDNYKVLFLQGGASLQF 80 (360)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCC----CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH
T ss_conf 11788854389999999999986025888605754558----88899999999999999848999818999578458999
Q ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCCCCCCHHHHHHHHH-H--HCCCEEEE
Q ss_conf 9999983154874881233448411147665433333220------1366583235659899999998-6--04667897
Q gi|254780349|r 109 QGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKA------IPYNVRKEDGLLDMHEIESLAI-E--YNPKLIIV 179 (433)
Q Consensus 109 ~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~------~~y~~d~~~~~ID~d~~~~~a~-~--~kPklIi~ 179 (433)
.++-+-|+.++++. .|+..|. ++.+.++- +..-.+.+.. .|..+-.... . .....+.+
T Consensus 81 ~~ip~Nll~~~~~a--------~y~~tG~---Ws~KA~~EA~~~~~~~v~~~~~~~--~~~~iP~~~~~~~~~~~~Y~h~ 147 (360)
T PRK05355 81 AMVPLNLLGKGGKA--------DYVVTGS---WSKKAIKEAKKYGEVNVAASSEDD--GFTYIPPLDEWQLSDDAAYVHY 147 (360)
T ss_pred HHHHHHCCCCCCEE--------EEEECCH---HHHHHHHHHHHHCCCCEECCCCCC--CCCCCCCHHHCCCCCCCCEEEE
T ss_conf 99987467889802--------3895388---899999973761687320134667--7755898665277977567997
Q ss_pred ECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCCCCCCC-EEEEECCCCHHHH
Q ss_conf 05524353637999988641797899186201244320001232200--23567404565225674-4898336205650
Q gi|254780349|r 180 GGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSLRGPRG-GLIMTNHADLAKK 256 (433)
Q Consensus 180 G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl~GPrg-GiI~~~~~e~~~~ 256 (433)
-.-....=+-|..+ -+.-+..|++|+|- ..+--|++. .|++..+-.|.| ||.| .+++-|+ ++-++
T Consensus 148 t~NETi~Gv~~~~~---P~~~~~pLV~DmSS-------~~lsrpiD~~~~d~iYagaQKNl-GpaGvtvvIvr~-~ll~~ 215 (360)
T PRK05355 148 TPNETIDGTEIHEL---PDTGDVPLVADMSS-------DILSRPIDVSKFGLIYAGAQKNI-GPAGLTIVIVRE-DLLGR 215 (360)
T ss_pred CCCCCCCCEEECCC---CCCCCCCEEEECCC-------CCCCCCCCHHHCCEEEEECCCCC-CCCCCEEEEEEH-HHHHC
T ss_conf 14775010461013---66689847997345-------43477677789157998743357-876518999759-99622
Q ss_pred CCHHHCHHHHH------------HHHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHCCCCC--CCCCCCC
Q ss_conf 16646543223------------4455666899999999735648-9999999988899999986168523--3458889
Q gi|254780349|r 257 INSAIFPGLQG------------GPFMHSIAAKAVAFGEALSSEF-RDYAKQIVLNSQALAKKLQFLGFDI--VSGGTDN 321 (433)
Q Consensus 257 i~~avfPg~qg------------~~~~~~iaa~aval~Ea~~~~f-~~Ya~qvv~NA~~La~~L~~~G~~v--v~ggTd~ 321 (433)
-++.+ |.+.. .|-.-.|--....|+-..+..+ ....++-.+-|+.|-..+...+|=. |.-.-.+
T Consensus 216 ~~~~i-P~~l~y~~~~~~~Sl~NTPp~f~iy~~~lvl~Wl~~~GGl~~~~~~n~~KA~lLY~~iD~s~fy~~~v~~~~RS 294 (360)
T PRK05355 216 ALPNI-PSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAIEKRNQEKAALLYDAIDSSDFYRNPVAPENRS 294 (360)
T ss_pred CCCCC-CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCC
T ss_conf 36689-60530999986367666884289999999999998617699999999998999999986078635889856568
Q ss_pred CE-EEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 81-26316655676799999888567188037899899998889851224666730799989999999999999
Q gi|254780349|r 322 HL-MLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQI 394 (433)
Q Consensus 322 H~-vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~ 394 (433)
-+ |..++.+..++ +++-+..++.||.-=| + .|+ -.|+|.+. .-+|..++.+.++++|.+-
T Consensus 295 ~mNV~F~~~~~~l~-~~Fl~~a~~~Gl~~Lk----G-hRs---vGG~RaSl----YNa~~~e~V~~L~~fm~~F 355 (360)
T PRK05355 295 RMNVPFTLADEELD-KKFLAEAEAAGLVGLK----G-HRS---VGGMRASI----YNAMPLEGVQALVDFMKEF 355 (360)
T ss_pred CCEEEEECCCHHHH-HHHHHHHHHCCCCCCC----C-CCC---CCCEEEEE----CCCCCHHHHHHHHHHHHHH
T ss_conf 65447871877789-9999999987986666----8-765---38527880----1799999999999999999
No 337
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase; InterPro: IPR004639 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway . The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin . The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) . This entry represents glutamate-1-semialdehyde (GSA) aminotransferase (5.4.3.8 from EC), which catalyse a transamination reaction to produce 5-aminoaevulinic acid during the first stage of tetrapyrrole biosynthesis by the C5 pathway , . This enzyme has a high degree of similarity to amino acid transaminases, and is classed as a class III aminotransferase.; GO: 0042286 glutamate-1-semialdehyde 21-aminomutase activity, 0033014 tetrapyrrole biosynthetic process.
Probab=96.39 E-value=0.11 Score=32.33 Aligned_cols=284 Identities=18% Similarity=0.199 Sum_probs=165.0
Q ss_pred HHHHHHHHHHHHHCCCC--CEECCCH-HHHHHHHHHHH---HHHCCCCEEEECCCCCCCC------------CCCC---C
Q ss_conf 99999999999871886--3010000-16799999999---8315487488123344841------------1147---6
Q gi|254780349|r 79 DIENIAIERAKKLFNVN--FVNVQSH-SGSQMNQGVFL---ALMHPGDSFMGLSLDSGGH------------LTHG---S 137 (433)
Q Consensus 79 ~iE~la~~~a~~lF~a~--~anvqp~-SG~~An~av~~---ALl~pGD~Il~~~l~~GGH------------lshg---~ 137 (433)
|.|.+-.+...+.+.+. + -||.. |||=|-|++.- +.+. -|+|+-++=..=|| .||| .
T Consensus 88 E~Ei~lA~~i~~~v~~~t~e-~vRfVnSGTEATMsAvRLARG~TG-R~~IiKFeGcYHGh~D~lLv~AGSGaaT~g~CG~ 165 (434)
T TIGR00713 88 EAEILLAKEIISRVPSVTEE-MVRFVNSGTEATMSAVRLARGFTG-RDKIIKFEGCYHGHHDALLVKAGSGAATLGSCGL 165 (434)
T ss_pred HHHHHHHHHHHHHCCCCCCC-EEEEECCCCHHHHHHHHHHHHCCC-CCCEEEECCCCCCCHHHHCCCCCCHHHCCCCCCC
T ss_conf 89999999998640555465-168621764889999998631058-8727886176410123200354521010468877
Q ss_pred CCCC-----CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE--EE----EECCC--CCCCCCHHHHHHHHHHCCCEE
Q ss_conf 6543-----33332201366583235659899999998604667--89----70552--435363799998864179789
Q gi|254780349|r 138 SVNM-----SGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKL--II----VGGTA--YSRVWDWERFRSIADSIGAYL 204 (433)
Q Consensus 138 ~~~~-----~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPkl--Ii----~G~S~--y~~~~d~~~l~eIa~~~ga~l 204 (433)
+-+. ..+.--++|| | |.+.+++..++..+++ || +|-.. -|.+-=++.+|+||++.|++|
T Consensus 166 P~SpGvP~~~~k~Tl~~PY-----N---D~~a~~~~f~~~G~~iAgvIvEPv~GNmGvvpP~~eFL~~Lr~lt~e~g~LL 237 (434)
T TIGR00713 166 PTSPGVPEDFAKLTLVLPY-----N---DLEALEEAFEEYGEEIAGVIVEPVAGNMGVVPPKKEFLEGLRELTEEYGALL 237 (434)
T ss_pred CCCCCCHHHHHHHCCCCCC-----C---CHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCEE
T ss_conf 8888870114311340451-----7---3899999998679834378861202576664885223589999998729577
Q ss_pred EECCCCHHHH-HHHHCCCCCCCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCC--HHHC-HHHHHHHHHHHHHHH
Q ss_conf 9186201244-320001232200-23567404565225--674489833620565016--6465-432234455666899
Q gi|254780349|r 205 MADISHISGL-VVGGQHPSPVPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKIN--SAIF-PGLQGGPFMHSIAAK 277 (433)
Q Consensus 205 ~~D~aH~~GL-Ia~g~~~~Pl~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~--~avf-Pg~qg~~~~~~iaa~ 277 (433)
+.|.= +.|. |+-+--|.=+.- .|++|. -|-+.| |-|++ -.|+ |+.++|- =.|| =|+.+|.-+..+|++
T Consensus 238 I~DEV-~TGFRva~~GAQ~yfgV~PDl~~l--GKI~GGGlP~gA~-gGrr-EiM~~laP~G~vYQAGTlsGNPlam~AG~ 312 (434)
T TIGR00713 238 IFDEV-ITGFRVALGGAQEYFGVEPDLTTL--GKIIGGGLPVGAF-GGRR-EIMERLAPEGPVYQAGTLSGNPLAMAAGL 312 (434)
T ss_pred EEECC-CCHHHCCHHHCCHHCCCCCCCEEE--CHHHCCCCCCEEE-CCCH-HHHHHHCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 55022-101221332150113787410342--3323376451012-2675-68843178877445643555889999999
Q ss_pred HHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHCCCCCCC---C------CC-CCCEEEECCCCCCCCHHH---HHHHH
Q ss_conf 9999997356--48999999998889999998616852334---5------88-898126316655676799---99988
Q gi|254780349|r 278 AVAFGEALSS--EFRDYAKQIVLNSQALAKKLQFLGFDIVS---G------GT-DNHLMLVDLRSKRMTGKR---AESIL 342 (433)
Q Consensus 278 aval~Ea~~~--~f~~Ya~qvv~NA~~La~~L~~~G~~vv~---g------gT-d~H~vlvdl~~~~~~G~~---a~~~L 342 (433)
| +|+...++ .|++..+.--+=+..|.+.|.+.|+++-- | +| ++--.=-+- .+.-|-.. .-+.|
T Consensus 313 a-tLk~~~~~~~~Y~~l~~~~~~L~~g~~e~l~~~gip~~~~~~gSMf~~FFtd~~~V~ny~~-A~~SD~e~F~~Ff~~m 390 (434)
T TIGR00713 313 A-TLKLLDEEKGVYTELDELAKRLAEGLSEVLEDKGIPHTVNRVGSMFSLFFTDEEEVTNYAD-AKKSDTELFAKFFHEM 390 (434)
T ss_pred H-HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCCHHH-HHHHHHHHHHHHHHHH
T ss_conf 9-9998534888348999999999999999998279858995044004566577889878899-9886189889999999
Q ss_pred HHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 85671880378998999988898512246667307999899999999999996
Q gi|254780349|r 343 GRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 343 e~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
-..|+.+ |-|+|-+.-|=. =+.+++++.+++...+++
T Consensus 391 L~~GVyl--------pPS~FEa~F~S~--------AH~~E~i~yaq~~ti~a~ 427 (434)
T TIGR00713 391 LEKGVYL--------PPSQFEACFISA--------AHTEEDIEYAQTNTIEAA 427 (434)
T ss_pred HHCCCCC--------CCCCHHHHHHCC--------CCCHHHHHHHHHHHHHHH
T ss_conf 8588878--------987211555167--------777211789999999999
No 338
>KOG1412 consensus
Probab=95.97 E-value=0.17 Score=30.91 Aligned_cols=290 Identities=17% Similarity=0.224 Sum_probs=165.1
Q ss_pred HHHHHHHHHHHCCCC--------CEECCCHHHHHHHHHH--HHHHHCCCCEEEECCCCCCCCCCCCCCCCCCC-CCCCCC
Q ss_conf 999999999871886--------3010000167999999--99831548748812334484111476654333-332201
Q gi|254780349|r 81 ENIAIERAKKLFNVN--------FVNVQSHSGSQMNQGV--FLALMHPGDSFMGLSLDSGGHLTHGSSVNMSG-KWFKAI 149 (433)
Q Consensus 81 E~la~~~a~~lF~a~--------~anvqp~SG~~An~av--~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g-~~~~~~ 149 (433)
+..+..-+.-+||.+ -.-||.+||+-|+... |.+-.-+..+|..-+..-+-|-. .-.-.| ......
T Consensus 77 ~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~---if~~aGf~tv~~Y 153 (410)
T KOG1412 77 PTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHA---IFEKAGFTTVATY 153 (410)
T ss_pred HHHHHHHHHHHCCCCCHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHH---HHHHCCCCEEEEE
T ss_conf 3566665877007885343322112024215653245667888875246526743886067788---9987388445566
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCC-EEEEECCC-CC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCC
Q ss_conf 36658323565989999999860466-78970552-43-----5363799998864179789918620124432000123
Q gi|254780349|r 150 PYNVRKEDGLLDMHEIESLAIEYNPK-LIIVGGTA-YS-----RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPS 222 (433)
Q Consensus 150 ~y~~d~~~~~ID~d~~~~~a~~~kPk-lIi~G~S~-y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~ 222 (433)
+| +|.++-.+|++.+...++.--++ +|++-.-+ .| -..-|+.+.+.-.+-.-..++|+| +-|+-.|..-.+
T Consensus 154 ~y-Wd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiA-YQGfASGD~~~D 231 (410)
T KOG1412 154 PY-WDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIA-YQGFASGDLDAD 231 (410)
T ss_pred EE-ECCCCCEECHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHH-HCCCCCCCCCCC
T ss_conf 63-1577712139999989863898737862001369878997889999999999744760354202-101246995410
Q ss_pred C--CCC----C--CEEEECCCCCCC--CCCCEEE--EECCCCHHHHCCHHH---CHHHHHHHH--HHHHHHHHHHHHH--
Q ss_conf 2--200----2--356740456522--5674489--833620565016646---543223445--5666899999999--
Q gi|254780349|r 223 P--VPH----C--HIVTTTTHKSLR--GPRGGLI--MTNHADLAKKINSAI---FPGLQGGPF--MHSIAAKAVAFGE-- 283 (433)
Q Consensus 223 P--l~~----A--Dvvt~sTHKtl~--GPrgGiI--~~~~~e~~~~i~~av---fPg~qg~~~--~~~iaa~aval~E-- 283 (433)
. ++| - =+|.-|.-|.|. |+|-|-+ ..|++.....+.+.. .-..-++|- =.+|.++...--|
T Consensus 232 awAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lr 311 (410)
T KOG1412 232 AWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELR 311 (410)
T ss_pred HHHHHHHHHCCCEEEEEHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHH
T ss_conf 89999999618738877665643166465536369994475577778877799886126788511458999984688889
Q ss_pred -HHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE-ECCC-CCCCCHHHHHHHHHHCCEEEECCCCCCCCCC
Q ss_conf -735648999999998889999998616852334588898126-3166-5567679999988856718803789989999
Q gi|254780349|r 284 -ALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLML-VDLR-SKRMTGKRAESILGRVSITCNKNSIPFDPES 360 (433)
Q Consensus 284 -a~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vl-vdl~-~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~ 360 (433)
.....-+.-+.++.+--.+|-..|.+ +-+-||=.|++= +-+- -.|++..++....+...|.+-.++
T Consensus 312 e~W~~sik~MssRI~~MR~aLrd~L~a----L~TPGtWDHI~~QiGMFSyTGLtp~qV~~li~~h~vyLl~~G------- 380 (410)
T KOG1412 312 EQWIQSIKTMSSRIKKMRTALRDHLVA----LKTPGTWDHITQQIGMFSYTGLTPAQVDHLIENHKVYLLSDG------- 380 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH----CCCCCCHHHHHHHCCCEEECCCCHHHHHHHHHHCEEEEECCC-------
T ss_conf 999999999999999999999999986----189985778876505143148998999999873638994388-------
Q ss_pred CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 88898512246667307999899999999999996025
Q gi|254780349|r 361 PFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDGS 398 (433)
Q Consensus 361 ~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~~ 398 (433)
||.- -|+..+..+-+|.-|++++...
T Consensus 381 -------RIni-----sGLN~~NveyVAkAIde~Vr~~ 406 (410)
T KOG1412 381 -------RINI-----SGLNMKNVEYVAKAIDETVRAI 406 (410)
T ss_pred -------CEEE-----ECCCCCCHHHHHHHHHHHHHHH
T ss_conf -------3766-----1456545899999999999752
No 339
>KOG0628 consensus
Probab=95.47 E-value=0.27 Score=29.61 Aligned_cols=303 Identities=16% Similarity=0.153 Sum_probs=172.5
Q ss_pred CHHHHHHHHHHHHHHHHHCCCC----------CEECCCHHHHHHHHHHHHHH-------HCCCC-----------EEEEC
Q ss_conf 0679999999999999871886----------30100001679999999983-------15487-----------48812
Q gi|254780349|r 74 CQYVDDIENIAIERAKKLFNVN----------FVNVQSHSGSQMNQGVFLAL-------MHPGD-----------SFMGL 125 (433)
Q Consensus 74 ~~~~d~iE~la~~~a~~lF~a~----------~anvqp~SG~~An~av~~AL-------l~pGD-----------~Il~~ 125 (433)
|--+.|+|.+..+-.-++.+.. -.-|=-.|.+-+++.+++|- ++.+. -|+=
T Consensus 108 sPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y- 186 (511)
T KOG0628 108 SPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY- 186 (511)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEE-
T ss_conf 8406789999999999985180987436789996068547513589999999999999863289764405565342488-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC-----CCEEE--EECCCCCCCCCHHHHHHHHH
Q ss_conf 334484111476654333332201366583235659899999998604-----66789--70552435363799998864
Q gi|254780349|r 126 SLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYN-----PKLII--VGGTAYSRVWDWERFRSIAD 198 (433)
Q Consensus 126 ~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~k-----PklIi--~G~S~y~~~~d~~~l~eIa~ 198 (433)
-.+-.|-|--......+.-.+.+ +.|. +..++-+.+++.+++-+ |=+|+ +|.+..--.-++.++.-||.
T Consensus 187 -~SDqahssveka~~i~~VklR~l--~td~-n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~ 262 (511)
T KOG0628 187 -CSDQAHSSVEKACLIAGVKLRAL--PTDE-NFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCR 262 (511)
T ss_pred -ECCCCCCHHHHHHHHCCEEEEEE--ECCC-CCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHCCHHH
T ss_conf -24764126887674400268885--1366-7677879999999999867986579998405765555541877410352
Q ss_pred HCCCEEEECCCCHHHHHHHHCCC--------CCCCCCCEEEECCCCCCCCC--------CCEEEEE---C-CCCH-H-HH
Q ss_conf 17978991862012443200012--------32200235674045652256--------7448983---3-6205-6-50
Q gi|254780349|r 199 SIGAYLMADISHISGLVVGGQHP--------SPVPHCHIVTTTTHKSLRGP--------RGGLIMT---N-HADL-A-KK 256 (433)
Q Consensus 199 ~~ga~l~~D~aH~~GLIa~g~~~--------~Pl~~ADvvt~sTHKtl~GP--------rgGiI~~---~-~~e~-~-~~ 256 (433)
+.|.||++|+| ++ |..+- +-+++||-+.+.-||-+--- +-|.=++ | ++.+ . +.
T Consensus 263 ~~glWLHVDAA-YA----Gsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~ 337 (511)
T KOG0628 263 EEGLWLHVDAA-YA----GSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAY 337 (511)
T ss_pred HCCEEEEEEHH-HC----CCCCCCHHHHHHHHCCHHHCCCCCCHHHEEEEEEEEECCEEECCCEEEEEEECCHHHHCCHH
T ss_conf 26878996345-31----54315887887750223330335785260377653000345047604666503827644433
Q ss_pred CCHHH-CHHHHHHHHHHHHHHHHHHH--HHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCEEEECCCCCC
Q ss_conf 16646-54322344556668999999--99735648999999998889999998616-8523345888981263166556
Q gi|254780349|r 257 INSAI-FPGLQGGPFMHSIAAKAVAF--GEALSSEFRDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHLMLVDLRSKR 332 (433)
Q Consensus 257 i~~av-fPg~qg~~~~~~iaa~aval--~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~vlvdl~~~~ 332 (433)
..+++ |+ .-.=|.-+++-++-+.| +-.....+++|.++.+.-|+.+.+-+.+- -|.++ +.-|+=||=+|-++
T Consensus 338 ~~~~~Dyr-hwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~---~~~~lgLvcFRlk~ 413 (511)
T KOG0628 338 QGSAPDYR-HWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIV---NKRILGLVCFRLKG 413 (511)
T ss_pred HCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE---CCCCCCEEEEEECC
T ss_conf 23688821-011520011326789999998868899999999999999999986048741550---22100215775258
Q ss_pred CCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 76799999888567188037899899998889851224666730799989999999999999602
Q gi|254780349|r 333 MTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 333 ~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
- -..-+..|.+.+-.-+-..+|---..-+ -||.- ++..--.++||.+--+.|.+..+.
T Consensus 414 ~-N~~ne~Ll~~in~~g~i~l~~~~l~gk~---vlRf~---V~s~~t~~~di~~a~~~I~~~a~~ 471 (511)
T KOG0628 414 D-NEINEALLNRLNSSGRIHLVPASLHGKF---VLRFA---VCSPLTNESDIDEAWKIIFEAADE 471 (511)
T ss_pred C-CHHHHHHHHHHHHCCCEEEEEEEECCEE---EEEEE---ECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 7-4789999999973696899776314669---99998---247878578899999999999999
No 340
>TIGR01140 CobD L-threonine-O-3-phosphate decarboxylase, putative; InterPro: IPR005860 L-threonine-O-3-phosphate decarboxylase (CobD) was shown to decarboxylate L-threonine O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, which is the precursor for the linkage between the nucleotide loop and the corrin ring in the biosynthesis of cobalamin . The molecule is a dimer where each subunit consists of a large and small domain . This family contains pyridoxal phosphate-binding class II aminotransferases closely related to histidinol-phosphate aminotransferase (HisC). ; GO: 0003824 catalytic activity, 0009236 cobalamin biosynthetic process.
Probab=94.98 E-value=0.37 Score=28.61 Aligned_cols=280 Identities=19% Similarity=0.243 Sum_probs=174.1
Q ss_pred CCCCCCCCC-HH-HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC------EECCCHHHHHHHH
Q ss_conf 104301029-89-999830510288657988875336006799999999999998718863------0100001679999
Q gi|254780349|r 38 LIASENIVS-RA-VLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNF------VNVQSHSGSQMNQ 109 (433)
Q Consensus 38 LiASEN~~S-~~-v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~------anvqp~SG~~An~ 109 (433)
--||-|... |. ++.++.+.|-. -+-|..-+|+.--..+ |+| --++--.++..-.
T Consensus 10 FsAninPlgpP~S~~aa~~~aLd~--------~~rYPD~dY~hlrqA~----------AdH~q~~~dwvl~gnG~~e~i~ 71 (349)
T TIGR01140 10 FSANINPLGPPASVKAALAAALDA--------LERYPDDDYIHLRQAL----------ADHHQVAADWVLAGNGELESIR 71 (349)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHH--------HHCCCCCCHHHHHHHH----------HHHHCCCCCCEECCCCCHHHHH
T ss_conf 434578888760204589874278--------7608884318999998----------6541256012545997278889
Q ss_pred HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-C--CHHHHHHHHHHHCC--CEEEEECCCC
Q ss_conf 99998315487488123344841114766543333322013665832356-5--98999999986046--6789705524
Q gi|254780349|r 110 GVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGL-L--DMHEIESLAIEYNP--KLIIVGGTAY 184 (433)
Q Consensus 110 av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~-I--D~d~~~~~a~~~kP--klIi~G~S~y 184 (433)
.|..++..+||++++.....|- +|+.+..+|-..+.+++.++.-.+. + |..++. +.....| ...|+.....
T Consensus 72 la~~t~~~~Gd~~~V~~P~F~e---YgR~~~~~Gae~~ti~w~~~~~~~W~~~~dPseiA-~l~A~~s~h~~lilctPnN 147 (349)
T TIGR01140 72 LAAETLVSRGDAVLVVAPAFAE---YGRELELAGAELKTIRWSLDEADGWRVLRDPSEIA-LLDAVTSEHDLLILCTPNN 147 (349)
T ss_pred HHHHHCCCCCCEEEEECCCCHH---HHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHH-HHCCCCCCCCEEEEECCCC
T ss_conf 9886147888757870887026---79999856981223457731688874557645665-4126883313531117676
Q ss_pred C--CCCCHHHHHHHH---HHCCCEEEECCCCHHHHHHH----HCCCCCCCCCCE-EEECCCC--CCCCCCCEEEEECCCC
Q ss_conf 3--536379999886---41797899186201244320----001232200235-6740456--5225674489833620
Q gi|254780349|r 185 S--RVWDWERFRSIA---DSIGAYLMADISHISGLVVG----GQHPSPVPHCHI-VTTTTHK--SLRGPRGGLIMTNHAD 252 (433)
Q Consensus 185 ~--~~~d~~~l~eIa---~~~ga~l~~D~aH~~GLIa~----g~~~~Pl~~ADv-vt~sTHK--tl~GPrgGiI~~~~~e 252 (433)
| .-++=+.|+.|+ +.++.-|++|.| ++|++-- |..|+=-++-+| |.=|-.| .|||=|-|.++..++-
T Consensus 148 PtG~l~~r~~l~A~a~rc~~~N~~LllDEA-F~dF~pPG~E~~l~p~l~~~P~~~vlRSLTKfy~lPGLRlGylva~~Da 226 (349)
T TIGR01140 148 PTGDLLERDALRALADRCKAVNIELLLDEA-FLDFLPPGEETSLVPSLKDTPNVVVLRSLTKFYALPGLRLGYLVAVDDA 226 (349)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCCCCCCCCHHHCCCCEEEECCHHHHHCCHHHHHHHHHCCCHH
T ss_conf 989862247899999888874046666556-5157898644343413326897899711155402502445455516617
Q ss_pred HHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-HHHHHHHHC-CCCCCCCCCCCCEEEECCCC
Q ss_conf 5650166465432234455666899999999735648999999998889-999998616-85233458889812631665
Q gi|254780349|r 253 LAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQ-ALAKKLQFL-GFDIVSGGTDNHLMLVDLRS 330 (433)
Q Consensus 253 ~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~-~La~~L~~~-G~~vv~ggTd~H~vlvdl~~ 330 (433)
.--++...--| =-.|..|+.+-...- .+.+|++-..|=+..++ +|-++|.+. ||.|.- ..+.-+|+++..
T Consensus 227 ~la~~r~~r~p-----W~vnalAaaag~~al-~~sef~q~tw~wl~~erar~~qaL~~lP~l~v~P--s~anfLLl~~~~ 298 (349)
T TIGR01140 227 LLARLRAARRP-----WSVNALAAAAGAAAL-RDSEFRQETWRWLAEERARLRQALADLPLLDVYP--SRANFLLLKVER 298 (349)
T ss_pred HHHHHHHHCCC-----CCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCCEEEECCC
T ss_conf 89999974289-----987768999999987-6678999998743667789999997178875588--887611454589
Q ss_pred CCCCHHHHHHHHHHCCEEEE
Q ss_conf 56767999998885671880
Q gi|254780349|r 331 KRMTGKRAESILGRVSITCN 350 (433)
Q Consensus 331 ~~~~G~~a~~~Le~~gI~~N 350 (433)
..++ -.++.|-+++|.+-
T Consensus 299 ~~~d--l~~~llt~~~IliR 316 (349)
T TIGR01140 299 EDVD--LQEELLTKERILIR 316 (349)
T ss_pred CCHH--HHHHHHHHCCCCHH
T ss_conf 8688--99999874341001
No 341
>TIGR01437 selA_rel pyridoxal phosphate-dependent enzyme, putative; InterPro: IPR006337 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). PLP is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination , , . PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors . Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy . PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalyzed reactions, enzymatic and non-enzymatic . This entry represents a group of proteins that are related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation. .
Probab=94.88 E-value=0.39 Score=28.43 Aligned_cols=316 Identities=20% Similarity=0.228 Sum_probs=189.9
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH--HHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHH-HHHHHC
Q ss_conf 301029899998305102886579888753360067--99999999999998718863010000167999999-998315
Q gi|254780349|r 41 SENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQY--VDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGV-FLALMH 117 (433)
Q Consensus 41 SEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~--~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av-~~ALl~ 117 (433)
.-|-+|+.|+++. || ++-.| ++++-+.+=+...++.+++-+.+ .||..|-.+. ++||+.
T Consensus 22 Gvs~Vs~ev~~a~------~~----------~~~~F~em~~ls~~tGe~~ar~lgvEdayI--ts~AsAGia~~vAali~ 83 (391)
T TIGR01437 22 GVSKVSDEVLEAT------KY----------VSDIFIEMDDLSRKTGEYIARRLGVEDAYI--TSGASAGIALAVAALIS 83 (391)
T ss_pred CCCHHHHHHHHHH------HH----------HHHHCEEHHHHHHHHHHHHHHHHCCCHHHH--HHHHHHHHHHHHHHHHC
T ss_conf 6640369999998------75----------655101089999999999998844306788--98788899999999751
Q ss_pred CCCE--EEECCCCC-C---------CC-CCCCCCCCCC--CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEE-EC
Q ss_conf 4874--88123344-8---------41-1147665433--3332201366583235659899999998604667897-05
Q gi|254780349|r 118 PGDS--FMGLSLDS-G---------GH-LTHGSSVNMS--GKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIV-GG 181 (433)
Q Consensus 118 pGD~--Il~~~l~~-G---------GH-lshg~~~~~~--g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~-G~ 181 (433)
.|+. +.-+..+. | || .-+|.|+... .-+-.++..|- .+..--..+|..+.++.-.++.+ -.
T Consensus 84 ~g~~ar~~~~~i~e~g~~~~vv~~rgH~vdyg~PV~~~i~~gGg~ivE~G~---~n~~s~~~lE~~I~~kt~aiLyvksh 160 (391)
T TIGR01437 84 KGTRARVIKDIIEEKGRKREVVLQRGHNVDYGAPVEDLIALGGGRIVEVGD---ENLVSEESLEETIKEKTAAILYVKSH 160 (391)
T ss_pred CCCCCEEECCHHHCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCEEEECC---CCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 676320110103203340067862787456788089999618994899778---88756789999997734675556532
Q ss_pred CCCC--CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCC--CCCCC----CCEEEECCCCCCCCCC-CEEEEECCCC
Q ss_conf 5243--536379999886417978991862012443200012--32200----2356740456522567-4489833620
Q gi|254780349|r 182 TAYS--RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHP--SPVPH----CHIVTTTTHKSLRGPR-GGLIMTNHAD 252 (433)
Q Consensus 182 S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~--~Pl~~----ADvvt~sTHKtl~GPr-gGiI~~~~~e 252 (433)
..-+ ...|++.+..||+++.-.|++|+|= -.-| |=++| ||.|--|--|.|-||- .|+|..|+ +
T Consensus 161 ~~vqk~ml~P~~~~~~vA~~~~vPlIVDAAA-------eiPP~edL~~y~~~GaDlViYSGaKa~~gpsnsGl~vGrK-~ 232 (391)
T TIGR01437 161 HLVQKDMLLPVEEVIRVAQSYKVPLIVDAAA-------EIPPEEDLTRYLKAGADLVIYSGAKALEGPSNSGLVVGRK-D 232 (391)
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCEEEECCC-------CCCCHHHHHHHHHHCCCEEEECCHHHCCCCCCCCEEECHH-H
T ss_conf 1357666663899999997568988986256-------8988014689997168755532034504643263233008-8
Q ss_pred HHHHCCHHHCHH-HHHHHHH-------------HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH---HCCCCCC
Q ss_conf 565016646543-2234455-------------6668999999997356489999999988899999986---1685233
Q gi|254780349|r 253 LAKKINSAIFPG-LQGGPFM-------------HSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQ---FLGFDIV 315 (433)
Q Consensus 253 ~~~~i~~avfPg-~qg~~~~-------------~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~---~~G~~vv 315 (433)
|-.-. ++.-|| -.-||.= ..|.|+-.|+.+-++..-..+++..-.-++-+++... ..=-.++
T Consensus 233 ~I~~~-~~~g~gseenGPDGtrvfIgRaMKIgKe~ivg~v~AvE~yl~~~~e~~~~k~~~~l~p~a~aIs~i~~l~a~iv 311 (391)
T TIGR01437 233 YIAAA-KSQGKGSEENGPDGTRVFIGRAMKIGKENIVGLVAAVERYLTFNDEDWLRKQRSRLDPIAEAISDIDDLMAKIV 311 (391)
T ss_pred HHHHH-HHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEE
T ss_conf 99999-86288765668986568873265103689999999999985168726789999984369999852410112356
Q ss_pred CCCCCCC-------EEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHH
Q ss_conf 4588898-------126316655676799999888567188037899899998889851224666730799989999999
Q gi|254780349|r 316 SGGTDNH-------LMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIG 388 (433)
Q Consensus 316 ~ggTd~H-------~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA 388 (433)
-++.=|| -|=||.+..|++.+++..+|..-.|-.- +++ .=+.=|.-.+--|-..|+||..|-
T Consensus 312 ~D~agnhPR~i~r~rV~v~~~~~Gl~A~eV~~~Lk~~~~aIY-------tr~----YQ~~~G~~~ldpr~v~e~e~~~Iv 380 (391)
T TIGR01437 312 QDEAGNHPRDIYRARVKVDAEEGGLSADEVISRLKAERVAIY-------TRE----YQLLDGVLELDPRSVKEDEMALIV 380 (391)
T ss_pred ECCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCH-------HHH----HHHHCCEEEECCCCCCCCCHHHHH
T ss_conf 768898885436888898222247678999998507999500-------224----554488588766113614168999
Q ss_pred HHHHHHHHC
Q ss_conf 999999602
Q gi|254780349|r 389 ELIAQILDG 397 (433)
Q Consensus 389 ~li~~~L~~ 397 (433)
+-+.++++.
T Consensus 381 ~rL~eI~~~ 389 (391)
T TIGR01437 381 DRLSEIVEK 389 (391)
T ss_pred HHHHHHHHH
T ss_conf 989999862
No 342
>KOG1401 consensus
Probab=94.70 E-value=0.43 Score=28.13 Aligned_cols=193 Identities=20% Similarity=0.175 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHH------CCCC--EEEECCCCCCCCCCCCCCCCCCC-CCCCCCCCCCC---CCC---CCCCHHHHH
Q ss_conf 016799999999831------5487--48812334484111476654333-33220136658---323---565989999
Q gi|254780349|r 102 HSGSQMNQGVFLALM------HPGD--SFMGLSLDSGGHLTHGSSVNMSG-KWFKAIPYNVR---KED---GLLDMHEIE 166 (433)
Q Consensus 102 ~SG~~An~av~~ALl------~pGD--~Il~~~l~~GGHlshg~~~~~~g-~~~~~~~y~~d---~~~---~~ID~d~~~ 166 (433)
-||+-||.+++..-. .|-+ +++.+.=.. ||....+.. .|+.-...+.| ++. ..=|..+++
T Consensus 123 nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsy-----HG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~ 197 (433)
T KOG1401 123 NSGTEANETALKFARKFTGKKHPEKKTKFIAFENSY-----HGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALE 197 (433)
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC-----CCCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHH
T ss_conf 697289999999999863534776641289985675-----776236667523466688887779853530558899999
Q ss_pred HHHHHHCC---CEEE---EECCCCCCCCC---HHHHHHHHHHCCCEEEECCCCHH----HHHHH-HCCCCCCCCCCEEEE
Q ss_conf 99986046---6789---70552435363---79999886417978991862012----44320-001232200235674
Q gi|254780349|r 167 SLAIEYNP---KLII---VGGTAYSRVWD---WERFRSIADSIGAYLMADISHIS----GLVVG-GQHPSPVPHCHIVTT 232 (433)
Q Consensus 167 ~~a~~~kP---klIi---~G~S~y~~~~d---~~~l~eIa~~~ga~l~~D~aH~~----GLIa~-g~~~~Pl~~ADvvt~ 232 (433)
++++.++- .+|+ .|.+- .+|.| ...+|.+|+.+|+++++|.-+.- |..-+ ..++ -.-|+.|.
T Consensus 198 k~~e~~~~~IaAvIvEPiqGaGG-~~p~~peFl~~l~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~---~~PDI~t~ 273 (433)
T KOG1401 198 KLFESHKGEIAAVIVEPIQGAGG-IIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFG---VTPDITTV 273 (433)
T ss_pred HHHHHCCCCEEEEEEECCCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCHHHHHHHHC---CCCCEEEE
T ss_conf 99984788568999713457888-656988999999999861596699603431765355277888858---69760231
Q ss_pred CCCCCCCC--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHH---HHHHHHHCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 04565225--67448983362056501664654322344556668999---99999735648999999998889999998
Q gi|254780349|r 233 TTHKSLRG--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKA---VAFGEALSSEFRDYAKQIVLNSQALAKKL 307 (433)
Q Consensus 233 sTHKtl~G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~a---val~Ea~~~~f~~Ya~qvv~NA~~La~~L 307 (433)
-|-|.| |-|+.+.+ + ++++.|+..- |-++|+..++.-.+.. .++.+..+|+|.. ||-+-.+.|-+.|
T Consensus 274 --aK~L~gGlPigA~~v~-~-kV~~~i~~~~-~l~hg~Tf~gnpLacs~~~~~l~~l~~pe~~k---~vs~~~k~L~~~l 345 (433)
T KOG1401 274 --AKPLGGGLPIGATGVR-D-KVAEMISPGD-HLYHGGTFSGNPLACSAGIKVLDELKDPETLK---NVSKIGKELRKLL 345 (433)
T ss_pred --HHHCCCCCEEEEEEEH-H-HHHHHCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH---HHHHHHHHHHHHH
T ss_conf --0203688515788655-7-7886518888-65557665788055548899999871889999---8988878999999
Q ss_pred HHCC
Q ss_conf 6168
Q gi|254780349|r 308 QFLG 311 (433)
Q Consensus 308 ~~~G 311 (433)
.+..
T Consensus 346 ~e~~ 349 (433)
T KOG1401 346 DEYL 349 (433)
T ss_pred HHHH
T ss_conf 9986
No 343
>KOG3846 consensus
Probab=94.09 E-value=0.58 Score=27.24 Aligned_cols=295 Identities=16% Similarity=0.188 Sum_probs=163.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHH-HHHCCCCEEEECCCCCCCCCC-----------
Q ss_conf 87533600679999999999999871886301000016799999999-831548748812334484111-----------
Q gi|254780349|r 67 SKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFL-ALMHPGDSFMGLSLDSGGHLT----------- 134 (433)
Q Consensus 67 g~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~-ALl~pGD~Il~~~l~~GGHls----------- 134 (433)
|++...-| .+-+.+..+.+-||+--+|-......+|+-+++ ++-||-.+-.-.-++.+.--|
T Consensus 105 GkvPW~~~------De~il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~l 178 (465)
T KOG3846 105 GKVPWVSI------DEPILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKL 178 (465)
T ss_pred CCCCEEEC------CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 66661455------624655434430677014445755666899999885078604633100047788417888756523
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE--EEE-ECCCCC-CCCCHHHHHHHHHHCCCEEEECCCC
Q ss_conf 476654333332201366583235659899999998604667--897-055243-5363799998864179789918620
Q gi|254780349|r 135 HGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKL--IIV-GGTAYS-RVWDWERFRSIADSIGAYLMADISH 210 (433)
Q Consensus 135 hg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPkl--Ii~-G~S~y~-~~~d~~~l~eIa~~~ga~l~~D~aH 210 (433)
||..+.-+.+..+.. +-...+-.+.+.+.+++..-.+ |.+ |-..|. ..+|+.++-+.-+.-|+++-+|-||
T Consensus 179 hG~~~e~sm~~iePR-----EGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAH 253 (465)
T KOG3846 179 HGISPENSMIQIEPR-----EGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAH 253 (465)
T ss_pred CCCCHHHHEEEECCC-----CCCCCHHHHHHHHHHHHCCCEEEEEEEECCEEECCCCCCHHHHHHCCCCCCCEECHHHHH
T ss_conf 578757823773456-----663101078799999736876999995052442253224144332135788476222564
Q ss_pred HHHHHHHHCCCCCCC---C-CCEEEECCCCCCCCCC---CEEEEE----CC----------CCHHHHCC-HHH---CHH-
Q ss_conf 124432000123220---0-2356740456522567---448983----36----------20565016-646---543-
Q gi|254780349|r 211 ISGLVVGGQHPSPVP---H-CHIVTTTTHKSLRGPR---GGLIMT----NH----------ADLAKKIN-SAI---FPG- 264 (433)
Q Consensus 211 ~~GLIa~g~~~~Pl~---~-ADvvt~sTHKtl~GPr---gGiI~~----~~----------~e~~~~i~-~av---fPg- 264 (433)
..|-| |+. + .|+-.-..+|.+-.-. ||+..- ++ -+.++|.. ..| .||
T Consensus 254 AvgNV-------pL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa 326 (465)
T KOG3846 254 AVGNV-------PLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGA 326 (465)
T ss_pred HHCCC-------CEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEHHHHCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCC
T ss_conf 53577-------52776157764777420113568875222564254321021677502147800343001203557641
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH-CCCC-----------CCCCCCCCC----EEE
Q ss_conf ---223445566689999999973564899999999888999999861-6852-----------334588898----126
Q gi|254780349|r 265 ---LQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQF-LGFD-----------IVSGGTDNH----LML 325 (433)
Q Consensus 265 ---~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~-~G~~-----------vv~ggTd~H----~vl 325 (433)
-++||-.+.++|+.-+|.-..+-.-.+.-++-+--...|..-+.. .|++ |++ -|.+| |+-
T Consensus 327 ~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiT-P~~~~erGcQLs 405 (465)
T KOG3846 327 LGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIIT-PTSTDERGCQLS 405 (465)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEEEC-CCCCCCCCCEEE
T ss_conf 1211379847379988766999988539988653446776899999874166760022161599847-864144564699
Q ss_pred ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 31665567679999988856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 326 VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 326 vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
+-+.+ ....+-.-|++-|.++.| | .|++||+.-..+-- .-.|+....+.+.++++
T Consensus 406 l~Fss---p~~~vfqeL~krGv~~Dk-------R---~PNvIRvAPvpLYN---~f~Dvy~f~n~L~e~~d 460 (465)
T KOG3846 406 LYFSS---PTPKVFQELHKRGVIGDK-------R---RPNVIRVAPVPLYN---TFSDVYIFVNALNEAMD 460 (465)
T ss_pred EEECC---CCHHHHHHHHHCCEECCC-------C---CCCCEEEECCHHHC---CHHHHHHHHHHHHHHHH
T ss_conf 99679---951889999873701325-------5---88832861420000---18999999999999998
No 344
>KOG2040 consensus
Probab=93.79 E-value=0.66 Score=26.87 Aligned_cols=221 Identities=14% Similarity=0.194 Sum_probs=120.8
Q ss_pred HHHHHHHH--HHHHHHHCCCCCEECCCH-HHHHHHHHHHHHH-HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999--999998718863010000-1679999999983-1548748812334484111476654333332201366
Q gi|254780349|r 77 VDDIENIA--IERAKKLFNVNFVNVQSH-SGSQMNQGVFLAL-MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN 152 (433)
Q Consensus 77 ~d~iE~la--~~~a~~lF~a~~anvqp~-SG~~An~av~~AL-l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~ 152 (433)
-.++|.|. +.....|-|..-+|.-.+ -|+.|.-|+.++. ...+.+++.-+-- | +-+.+-..-+.-+++
T Consensus 159 QGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~---h-----pqtlsV~~TRa~~~~ 230 (1001)
T KOG2040 159 QGRLESLLNYQTMITDLTGLPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNC---H-----PQTLSVVKTRAKGFG 230 (1001)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCC---C-----CCHHHHHHCCCCCCC
T ss_conf 20699875067776650288655423321312589999998763226428865877---8-----333246520366653
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEE
Q ss_conf 58323565989999999860466789705524353637999988641797899186201244320001232200-23567
Q gi|254780349|r 153 VRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVT 231 (433)
Q Consensus 153 ~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt 231 (433)
++-+ ..|..+...-.+..- .+++--.-......||.++.+.|+..|.++++ ..-|.|=-....|=++ |||+.
T Consensus 231 i~v~--~~~~~~~~~s~~~v~-gvlvQYP~t~G~i~d~~el~~~a~~~~s~vv~----atDLLaLtiLrpPgefGaDIav 303 (1001)
T KOG2040 231 IKVV--VSDIKEADYSSKDVS-GVLVQYPDTEGSVLDFDELVELAHANGSLVVM----ATDLLALTILRPPGEFGADIAV 303 (1001)
T ss_pred EEEE--ECCHHHHHCCCCCEE-EEEEECCCCCCCCCCHHHHHHHHHCCCCEEEE----EHHHHHHHCCCCHHHCCCEEEE
T ss_conf 3688--447787202335521-69997588777607889999976306855898----4025688702782332841464
Q ss_pred ECCCC-----CCCCCCCEEEEECCCCHHHHC------------------------------CHHHCHHHHHHHHHHHHHH
Q ss_conf 40456-----522567448983362056501------------------------------6646543223445566689
Q gi|254780349|r 232 TTTHK-----SLRGPRGGLIMTNHADLAKKI------------------------------NSAIFPGLQGGPFMHSIAA 276 (433)
Q Consensus 232 ~sTHK-----tl~GPrgGiI~~~~~e~~~~i------------------------------~~avfPg~qg~~~~~~iaa 276 (433)
+|+.. -..||+.|+..+.+ ++..+| |+|.-.-...-.++..++|
T Consensus 304 GSsQRFGVPlGYGGPHAaFfAv~~-~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaA 382 (1001)
T KOG2040 304 GSSQRFGVPLGYGGPHAAFFAVSE-SLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAA 382 (1001)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHH-HHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 143213765567884088999999-9974389735755305666688999888899887632010014679999987787
Q ss_pred HHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 9999999735648-999999998889999998616852334
Q gi|254780349|r 277 KAVAFGEALSSEF-RDYAKQIVLNSQALAKKLQFLGFDIVS 316 (433)
Q Consensus 277 ~aval~Ea~~~~f-~~Ya~qvv~NA~~La~~L~~~G~~vv~ 316 (433)
.-.-.. -|++ ++-+++|-.-+-.|+..|...|..|+.
T Consensus 383 myaiYH---Gp~gL~~IArrvh~~T~~l~~~l~~aghel~~ 420 (1001)
T KOG2040 383 MYAIYH---GPHGLKEIARRVHNLTLILAEGLKNAGHELQH 420 (1001)
T ss_pred HHHHHC---CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
T ss_conf 775430---83789999999888999999987633623304
No 345
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=91.84 E-value=1.2 Score=25.05 Aligned_cols=284 Identities=16% Similarity=0.187 Sum_probs=142.8
Q ss_pred CCCCHHHHH-HHHHHHHHHHHHCCC--CCEECCCHHHHHHHHHHHHHH----HCCCCE---EEECCCCCCCCCCCCCCCC
Q ss_conf 360067999-999999999987188--630100001679999999983----154874---8812334484111476654
Q gi|254780349|r 71 YGGCQYVDD-IENIAIERAKKLFNV--NFVNVQSHSGSQMNQGVFLAL----MHPGDS---FMGLSLDSGGHLTHGSSVN 140 (433)
Q Consensus 71 y~G~~~~d~-iE~la~~~a~~lF~a--~~anvqp~SG~~An~av~~AL----l~pGD~---Il~~~l~~GGHlshg~~~~ 140 (433)
|.|-+--+. |+.++. -.++-+|- .--|+-...||+...--+.-| ..-|+. ++-++.+.=|.-- +.
T Consensus 70 Y~~pQG~~~li~ala~-~l~~~yGwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d----~~ 144 (417)
T COG3977 70 YDGPQGKAVLIDALAK-MLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYAD----AG 144 (417)
T ss_pred CCCCCCHHHHHHHHHH-HHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHCCCCC----CC
T ss_conf 8997641699999999-998975787664415632786115889988754766798510466436834326554----46
Q ss_pred CCCCCCCCCCC-----CCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCC
Q ss_conf 33333220136-----6583235659899999998604667897055243-----5363799998864179789918620
Q gi|254780349|r 141 MSGKWFKAIPY-----NVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYS-----RVWDWERFRSIADSIGAYLMADISH 210 (433)
Q Consensus 141 ~~g~~~~~~~y-----~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH 210 (433)
.....|.++.- +-..-.+.+|++++.-. ++-..|++.....| -...+.++..+|..+|.-|+.|.|-
T Consensus 145 l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i~---e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAY 221 (417)
T COG3977 145 LEEDLFVSAKPNIELLPAGQFKYHVDFEHLHIG---ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAY 221 (417)
T ss_pred CCCCCEEECCCCCCCCCCCCEEECCCHHHHCCC---CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf 572123552687532666662213778881336---76026996478898877364889998998742238967973566
Q ss_pred HH---HHHHHHCCCCCCCCCC-EEEECCCC-CCCCCCCEEEEECCCCHHHHCCH-----HHCHHHHHHHHHHHHHH---H
Q ss_conf 12---4432000123220023-56740456-52256744898336205650166-----46543223445566689---9
Q gi|254780349|r 211 IS---GLVVGGQHPSPVPHCH-IVTTTTHK-SLRGPRGGLIMTNHADLAKKINS-----AIFPGLQGGPFMHSIAA---K 277 (433)
Q Consensus 211 ~~---GLIa~g~~~~Pl~~AD-vvt~sTHK-tl~GPrgGiI~~~~~e~~~~i~~-----avfPg~qg~~~~~~iaa---~ 277 (433)
-. |+|-... +|+=.-. +..+|-.| -|||-|.|||..|+ ++-+.|.+ +.-||-.|-....++.- +
T Consensus 222 g~PFP~iifsd~--~~~w~~NiilC~SLSK~GLPG~R~GIiIane-~viqaitnmn~iisLap~~~G~Aiaa~mie~gdl 298 (417)
T COG3977 222 GVPFPGIIFSDA--TPLWNENIILCMSLSKLGLPGSRCGIIIANE-KVIQAITNMNGIISLAPGRMGPAIAAEMIESGDL 298 (417)
T ss_pred CCCCCCEECCCC--CCCCCCCEEEEEEHHHCCCCCCEEEEEECCH-HHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCHH
T ss_conf 799786200356--4156787788831433489873035796269-9999997114535316787568999988602428
Q ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE-ECCCCCCCCHHHHHHHHHHCCEEEE--CCCC
Q ss_conf 999999735648999999998889999998616852334588898126-3166556767999998885671880--3789
Q gi|254780349|r 278 AVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLML-VDLRSKRMTGKRAESILGRVSITCN--KNSI 354 (433)
Q Consensus 278 aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vl-vdl~~~~~~G~~a~~~Le~~gI~~N--kn~i 354 (433)
+---.+...|+|+.-+++++ ..|.++|-+.-+.+-. -+--.++ +=+.+..++..+..++|.+.|.++= .+..
T Consensus 299 ~rlseqVIrPFY~~~~q~~~---~~l~~~lp~~~~~iHk--pEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FF 373 (417)
T COG3977 299 LRLSEQVIRPFYRNRVQTTI---AILRRYLPEYRCLIHK--PEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFF 373 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHCCCCCEEEEC--CCCCEEEHHHHCCCCCCHHHHHHHHHHCEEEEECCCCCC
T ss_conf 88999864388898899999---9999865776525426--875154133553587668999999986868994463247
Q ss_pred CCCCCC-CCCCCCCCCC
Q ss_conf 989999-8889851224
Q gi|254780349|r 355 PFDPES-PFITSGIRLG 370 (433)
Q Consensus 355 P~D~~~-~~~~sGiRlG 370 (433)
|+-++. |...--+|+.
T Consensus 374 pGl~~ewpH~hqC~Rmn 390 (417)
T COG3977 374 PGLDKEWPHTHQCMRMN 390 (417)
T ss_pred CCCCCCCCCCCCEEEEE
T ss_conf 89998887612247875
No 346
>KOG0258 consensus
Probab=91.09 E-value=1.4 Score=24.53 Aligned_cols=264 Identities=19% Similarity=0.196 Sum_probs=137.5
Q ss_pred HHHHHHHCCCCCEECCCHHHHHHHHHHHHHHH--CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCC
Q ss_conf 99999871886301000016799999999831--54874881233448411147665433333220136658323-5659
Q gi|254780349|r 85 IERAKKLFNVNFVNVQSHSGSQMNQGVFLALM--HPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-GLLD 161 (433)
Q Consensus 85 ~~~a~~lF~a~~anvqp~SG~~An~av~~ALl--~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~~ID 161 (433)
|+|--. +-|+.-|+-..+|.......++.|+ .+.|-||.+-... -- ...+.+...-..++|-+|+++ +.+|
T Consensus 126 I~rRDG-~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQY-PL----YsAti~l~~~~~v~YyLdEe~~W~ld 199 (475)
T KOG0258 126 IERRDG-IPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQY-PL----YSATISLLGGTQVPYYLDEESNWSLD 199 (475)
T ss_pred HHHCCC-CCCCHHHEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCC-CH----HHHHHHHHCCCCCCEEECCCCCCCCC
T ss_conf 885268-9898777553278858999999999658987037526877-40----48889972883354354334477788
Q ss_pred HHHHHHHHHHH----CCCEEEE-EC----CCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHH-----------CCC
Q ss_conf 89999999860----4667897-05----5243536379999886417978991862012443200-----------012
Q gi|254780349|r 162 MHEIESLAIEY----NPKLIIV-GG----TAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGG-----------QHP 221 (433)
Q Consensus 162 ~d~~~~~a~~~----kPklIi~-G~----S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g-----------~~~ 221 (433)
.+++++...+. +|++.++ .. -..+-.-+++++-..|.+.|..|++|.-----.-..+ .+.
T Consensus 200 ~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg 279 (475)
T KOG0258 200 VAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMG 279 (475)
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHCHHHHHHHHHHHHHCCCEEECHHHHHHHCCCCCCHHHHHHHHHHHHC
T ss_conf 99999999998616884189997799961145068779999999987370773268887632578760274999999846
Q ss_pred CCCCC--CCEEEECCCCCCC---CCCCEEE-EEC-CCCHHH---HCC-HHHCHHHHHHHHHHHHHHHHHHHHHHH-----
Q ss_conf 32200--2356740456522---5674489-833-620565---016-646543223445566689999999973-----
Q gi|254780349|r 222 SPVPH--CHIVTTTTHKSLR---GPRGGLI-MTN-HADLAK---KIN-SAIFPGLQGGPFMHSIAAKAVAFGEAL----- 285 (433)
Q Consensus 222 ~Pl~~--ADvvt~sTHKtl~---GPrgGiI-~~~-~~e~~~---~i~-~avfPg~qg~~~~~~iaa~aval~Ea~----- 285 (433)
+|.+. .=+-..|++|.+. |+|||-. ++| .++..+ |+. -..+|-. .+-+...++..
T Consensus 280 ~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V---------~GQ~~vdl~VnPP~Pg 350 (475)
T KOG0258 280 NPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQV---------SGQKLVDLVVNPPKPG 350 (475)
T ss_pred CCCCCCEEEEEEECCCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHCCCC---------CCHHHHCEECCCCCCC
T ss_conf 8677855776610355221123055677321105882787778988756416675---------3225332015899999
Q ss_pred CHHHHHHHHH---HHHHHHHHHHHHHHCCCCCCC----CCCCCCEEEE---CCCC--------CCCCHH--HHHHHHHHC
Q ss_conf 5648999999---998889999998616852334----5888981263---1665--------567679--999988856
Q gi|254780349|r 286 SSEFRDYAKQ---IVLNSQALAKKLQFLGFDIVS----GGTDNHLMLV---DLRS--------KRMTGK--RAESILGRV 345 (433)
Q Consensus 286 ~~~f~~Ya~q---vv~NA~~La~~L~~~G~~vv~----ggTd~H~vlv---dl~~--------~~~~G~--~a~~~Le~~ 345 (433)
.+.|..|++. |+.+-+.=| .|.+.+|+-+- ...+--+-+. ++-. .++... .+-+.||.-
T Consensus 351 d~Sy~~~~~Ekd~il~~l~~ra-~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~t 429 (475)
T KOG0258 351 DPSYDLFSSEKDGILSSLRSRA-KLTEDAFNSLEGISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEAT 429 (475)
T ss_pred CCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCEEECCCCCCEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHC
T ss_conf 8426666666676899998762-889998750576463267622353453467888999999708997089999999765
Q ss_pred CEEEECCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 71880378998999988898512246667
Q gi|254780349|r 346 SITCNKNSIPFDPESPFITSGIRLGTPSG 374 (433)
Q Consensus 346 gI~~Nkn~iP~D~~~~~~~sGiRlGT~ai 374 (433)
||-+ |||- . -|=|=||--+
T Consensus 430 GIcv----VPGS---G---FGQ~~GtyH~ 448 (475)
T KOG0258 430 GICV----VPGS---G---FGQKEGTYHF 448 (475)
T ss_pred CEEE----ECCC---C---CCCCCCEEEE
T ss_conf 7588----3488---7---7889850488
No 347
>KOG1402 consensus
Probab=90.25 E-value=1.7 Score=24.03 Aligned_cols=273 Identities=21% Similarity=0.252 Sum_probs=134.3
Q ss_pred HHHHHHCCCCCEECCCHHHHHHHHHHHHHH------HC--CCCEEEECCCCCCCCCCCCCC---CCCCCCC---CCCCCC
Q ss_conf 999987188630100001679999999983------15--487488123344841114766---5433333---220136
Q gi|254780349|r 86 ERAKKLFNVNFVNVQSHSGSQMNQGVFLAL------MH--PGDSFMGLSLDSGGHLTHGSS---VNMSGKW---FKAIPY 151 (433)
Q Consensus 86 ~~a~~lF~a~~anvqp~SG~~An~av~~AL------l~--pGD~Il~~~l~~GGHlshg~~---~~~~g~~---~~~~~y 151 (433)
+..-+||+-+-+-. .-.|.-|+-.++.-. .| |-|+-..++...-= ||+. ++.|+.. -.+-||
T Consensus 108 ~~vt~lf~~~kvlp-mnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nF---hGrT~~ais~s~d~ds~~~fgp~ 183 (427)
T KOG1402 108 EYVTKLFGYDKVLP-MNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNF---HGRTLGAISLSTDPDSWDGFGPF 183 (427)
T ss_pred HHHHHHCCCCEEEE-CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC---CCCEEEEEEECCCCCHHHCCCCC
T ss_conf 99998668545532-355406778799999997776316886600489850555---67334567715780065456999
Q ss_pred -CCCCCCCCCCHHHHHHHHHHHC-CCE--EEE------ECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCC
Q ss_conf -6583235659899999998604-667--897------055243536379999886417978991862012443200012
Q gi|254780349|r 152 -NVRKEDGLLDMHEIESLAIEYN-PKL--IIV------GGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHP 221 (433)
Q Consensus 152 -~~d~~~~~ID~d~~~~~a~~~k-Pkl--Ii~------G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~ 221 (433)
|.+ ...|+|..++.+-...+ |++ .++ ++-.-|-+-=+++.||+|.+++-++++|.-|+ ||=-.|.+-
T Consensus 184 ~P~~--~~~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQT-Gl~RTGk~l 260 (427)
T KOG1402 184 LPGV--VDKVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQT-GLARTGKLL 260 (427)
T ss_pred CCCC--CEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCHHHHHHHHHHHHHCEEEEEHHHHH-CCCCCCCEE
T ss_conf 9986--3032268779999986298756898511346653372892067899999875147888244342-523467478
Q ss_pred CCCCC----CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCCHHHC-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf 32200----23567404565225---6744898336205650166465-4322344556668999999997356489999
Q gi|254780349|r 222 SPVPH----CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKINSAIF-PGLQGGPFMHSIAAKAVAFGEALSSEFRDYA 293 (433)
Q Consensus 222 ~Pl~~----ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~avf-Pg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya 293 (433)
-.+| -|+|-. -|-|.| |-.+. ++.+ +++-.|+..-. -.++|||+-- +.|+|..|...+
T Consensus 261 -a~d~env~PDivil--gKalSGG~~Pvsav-l~~~-~im~~~~pgeHgsTyggNpLg~---~vaiAalevi~e------ 326 (427)
T KOG1402 261 -ACDYENVRPDIVIL--GKALSGGVYPVSAV-LADD-DIMLNIKPGEHGSTYGGNPLGC---AVAIAALEVIVE------ 326 (427)
T ss_pred -EEEHHHCCCCEEEE--ECCCCCCEEEEEEE-EECH-HHHHCCCCCCCCCCCCCCHHHH---HHHHHHHHHHHH------
T ss_conf -86543158776898--11136870456899-8547-8986168775556568880888---999999999999------
Q ss_pred HHHHHHHHHHHHHHHHCCCCC----------CCC-CCCCCEEEECCCCCCCCHHHHHHHHH---HCCEEEECCCCCCCCC
Q ss_conf 999988899999986168523----------345-88898126316655676799999888---5671880378998999
Q gi|254780349|r 294 KQIVLNSQALAKKLQFLGFDI----------VSG-GTDNHLMLVDLRSKRMTGKRAESILG---RVSITCNKNSIPFDPE 359 (433)
Q Consensus 294 ~qvv~NA~~La~~L~~~G~~v----------v~g-gTd~H~vlvdl~~~~~~G~~a~~~Le---~~gI~~Nkn~iP~D~~ 359 (433)
...++||+.|.+.|..+=-.+ |.| |--|- +.++- ....|+++-+.|- ..|...
T Consensus 327 ekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~a-i~i~~--~~~~~~~aw~~cl~lk~~g~LA---------- 393 (427)
T KOG1402 327 EKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNA-IVINP--SKTSGQDAWDVCLALKENGLLA---------- 393 (427)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCEEEE-EEECC--CCCCCHHHHHHHHCCCCCCCCC----------
T ss_conf 7899999998799999998544025644433422533788-99615--5566465888887030256104----------
Q ss_pred CCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9888985122466673079998999999999999960
Q gi|254780349|r 360 SPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 360 ~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
.|....=||+--|- + ..|+|+++=.+.|..++.
T Consensus 394 kptH~~IiRfaPPL-~---I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402 394 KPTHGNIIRFAPPL-V---ISEEDLREGIEAIEKTIA 426 (427)
T ss_pred CCCCCCEEEECCCC-C---CCHHHHHHHHHHHHHHHC
T ss_conf 77788758746884-3---578999889999999742
No 348
>TIGR01885 Orn_aminotrans ornithine--oxo-acid transaminase; InterPro: IPR010164 Ornithine aminotransferase catalyses the conversion of L-ornithine and a 2-oxo acid to L-glutamate 5-semialdehyde and an L-amino acid. This enzyme is found in low-GC bacteria, where it is responsible for the fourth step in arginine biosynthesis, and in the mitochondrial matrix of eukaryotes, where it controls L-ornithine levels in tissues. In human hereditary ornithine aminotransferase deficiency, the elevated levels of intraocular concentrations of ornithine are responsible for gyrate atrophy, which affects the CNS and peripheral nervous system ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding.
Probab=89.91 E-value=1.8 Score=23.85 Aligned_cols=279 Identities=20% Similarity=0.305 Sum_probs=155.5
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEE-CCCHHHHHHHHHHHHHHHC--------C--------------CCEEEECCCCCCC-
Q ss_conf 79999999999999871886301-0000167999999998315--------4--------------8748812334484-
Q gi|254780349|r 76 YVDDIENIAIERAKKLFNVNFVN-VQSHSGSQMNQGVFLALMH--------P--------------GDSFMGLSLDSGG- 131 (433)
Q Consensus 76 ~~d~iE~la~~~a~~lF~a~~an-vqp~SG~~An~av~~ALl~--------p--------------GD~Il~~~l~~GG- 131 (433)
+.|.+--.+.+-.-+|||-+|-. .-.-||+=|--+++..-=+ | |-|+.++|+..--
T Consensus 81 f~nd~lg~~~~~~t~LfgGk~~~vL~mNTGaEAvEtA~KLAR~WgY~~K~ip~~kA~ii~~~GNFhGRTlgA~S~Std~e 160 (426)
T TIGR01885 81 FHNDVLGEFAKYLTKLFGGKYEKVLPMNTGAEAVETALKLARKWGYEVKGIPRNKAKIIAASGNFHGRTLGAVSASTDSE 160 (426)
T ss_pred HHCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCH
T ss_conf 60603578999999754995105604568734799999999974413578557623899853887330354432026721
Q ss_pred CCC--CCCCC--CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC-----C--EEEE------ECCCCCCCCCHHHHH
Q ss_conf 111--47665--43333322013665832356598999999986046-----6--7897------055243536379999
Q gi|254780349|r 132 HLT--HGSSV--NMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNP-----K--LIIV------GGTAYSRVWDWERFR 194 (433)
Q Consensus 132 Hls--hg~~~--~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kP-----k--lIi~------G~S~y~~~~d~~~l~ 194 (433)
..- -|-.+ ..+|..|+.+||+ |.+++++.+.+ | . -+|+ ++-.-|=+-=+..+|
T Consensus 161 ~~k~~FGPflPnvasGhgf~~iPYg--------d~EAl~~aL~~--P~~~GDnVAA~i~EPIQGEAGvvvPp~gYl~~V~ 230 (426)
T TIGR01885 161 TSKKGFGPFLPNVASGHGFRKIPYG--------DLEALRKALQD--PKKTGDNVAAFILEPIQGEAGVVVPPPGYLPGVR 230 (426)
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCC--------CHHHHHHHHHC--CCCCCCCEEEEEECCCCCCCCEEECCCCHHHHHH
T ss_conf 2006787967743357852115588--------87899999727--5778886899995040354436848963578999
Q ss_pred HHHHHCCCEEEECCCCHHHHHHHH-----CCCCCCCCCCEEEECCCCCCCC---CCCEEEEECCCCHHHHCCHHHCHH--
Q ss_conf 886417978991862012443200-----0123220023567404565225---674489833620565016646543--
Q gi|254780349|r 195 SIADSIGAYLMADISHISGLVVGG-----QHPSPVPHCHIVTTTTHKSLRG---PRGGLIMTNHADLAKKINSAIFPG-- 264 (433)
Q Consensus 195 eIa~~~ga~l~~D~aH~~GLIa~g-----~~~~Pl~~ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~avfPg-- 264 (433)
++|++.+.++++|.=|+ ||==+| -|.+--=--||+.- -|-|.| |=+++|.++ |+. +..+||
T Consensus 231 ~LC~~~nVLfI~DEiQT-GlGRTGk~la~dh~~aev~PDi~lL--GKALsGGv~PiSa~la~~--dim----~vl~PGPF 301 (426)
T TIGR01885 231 ALCKEHNVLFIADEIQT-GLGRTGKLLACDHENAEVKPDIVLL--GKALSGGVYPISAVLADD--DIM----SVLKPGPF 301 (426)
T ss_pred HHHHHCCCEEEEEEECC-CCCHHHHHHHHHCCCCEECCCCEEE--EHHHCCCCCCEEEEEECC--CEE----ECCCCCCC
T ss_conf 98655187289820003-8402545331010588204503351--123458946224366646--401----21176486
Q ss_pred HH-----HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH----HHHCC--CC-CCC---C-CCCCCEEEECC
Q ss_conf 22-----3445566689999999973564899999999888999999----86168--52-334---5-88898126316
Q gi|254780349|r 265 LQ-----GGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKK----LQFLG--FD-IVS---G-GTDNHLMLVDL 328 (433)
Q Consensus 265 ~q-----g~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~----L~~~G--~~-vv~---g-gTd~H~vlvdl 328 (433)
.. |||+--+ .|+|-.|.+.+| .--+||..|.+. |.+.- ++ ||. | |==+=.++.|-
T Consensus 302 ~HGSTfGGNPLAca---vaiAaLeVL~~e------kL~~~A~~lG~~f~~~L~~l~~~S~dvv~EVRGkGLL~AIe~~~~ 372 (426)
T TIGR01885 302 EHGSTFGGNPLACA---VAIAALEVLEEE------KLAERADQLGDMFLDELKQLARESPDVVKEVRGKGLLIAIEFKEN 372 (426)
T ss_pred CCCCCCCCCHHHHH---HHHHHHHHHHCC------CHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCEEEEEEECC
T ss_conf 56776887578999---999999987404------506889883289999999887507640001156721688885065
Q ss_pred CCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 6556767999998885671880378998999988898512246667307999899999999999996
Q gi|254780349|r 329 RSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQIL 395 (433)
Q Consensus 329 ~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L 395 (433)
+.+..+-..+-.+|.+.|.++.. + ....=|||- |.++ .+++|.++.-+.|..+|
T Consensus 373 ka~~~~~w~~Cl~~k~~GLlak~--~-------nhd~~IR~a-PPL~---i~~E~L~~~ie~i~K~~ 426 (426)
T TIGR01885 373 KADEIGAWDVCLRLKENGLLAKP--T-------NHDKIIRLA-PPLV---ITKEQLDEVIEIIRKTL 426 (426)
T ss_pred CCCCCCHHHHHHHHHCCCCEECC--C-------CCCCEEEEC-CCCC---CCHHHHHHHHHHHHHCC
T ss_conf 33326466887885207421013--3-------587068717-8852---63899999999986049
No 349
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; InterPro: IPR011772 This entry respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions . This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This entry identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologues of this gene are not found in plants which rely solely on the aerobic cyclase.; GO: 0016709 oxidoreductase activity acting on paired donors with incorporation or reduction of molecular oxygen NADH or NADPH as one donor and incorporation of one atom of oxygen, 0050661 NADP binding, 0015995 chlorophyll biosynthetic process.
Probab=87.68 E-value=0.59 Score=27.21 Aligned_cols=68 Identities=19% Similarity=0.328 Sum_probs=51.8
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCC-CCCCCHHHHHHHHHHC--CCEEEECCCCHHHHHHHHCC
Q ss_conf 33220136658323565989999999860466789705524-3536379999886417--97899186201244320001
Q gi|254780349|r 144 KWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAY-SRVWDWERFRSIADSI--GAYLMADISHISGLVVGGQH 220 (433)
Q Consensus 144 ~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y-~~~~d~~~l~eIa~~~--ga~l~~D~aH~~GLIa~g~~ 220 (433)
-+|.-+.+ +|.+++.+-=+++.+..+.++|.++..|-|+. |-.+=..+.-.++.|. ++++++ ||+|
T Consensus 36 AG~~d~~f-~DA~~~~l~de~l~e~lr~~~Pd~v~~GhtaiTp~~y~a~~~lk~~rE~lPN~~~vl----------GGih 104 (506)
T TIGR02026 36 AGYDDVTF-LDAMTDPLTDEKLVERLRAHRPDLVLIGHTAITPAIYIAEETLKVARERLPNAIIVL----------GGIH 104 (506)
T ss_pred CCCCCCEE-EECCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHH----------CCCC
T ss_conf 68766377-622368887489999997259868997265554201899999999986244355342----------4646
Q ss_pred CC
Q ss_conf 23
Q gi|254780349|r 221 PS 222 (433)
Q Consensus 221 ~~ 222 (433)
|-
T Consensus 105 pT 106 (506)
T TIGR02026 105 PT 106 (506)
T ss_pred CC
T ss_conf 42
No 350
>PRK04286 hypothetical protein; Provisional
Probab=87.27 E-value=2.3 Score=23.09 Aligned_cols=90 Identities=20% Similarity=0.240 Sum_probs=51.3
Q ss_pred CCCCEEEECC--CCCCCCCCC-CCCCCCCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC-CCCCCC----
Q ss_conf 5487488123--344841114-76654333332-20136658323565989999999860466789705-524353----
Q gi|254780349|r 117 HPGDSFMGLS--LDSGGHLTH-GSSVNMSGKWF-KAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGG-TAYSRV---- 187 (433)
Q Consensus 117 ~pGD~Il~~~--l~~GGHlsh-g~~~~~~g~~~-~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~-S~y~~~---- 187 (433)
+-||+.+.+| +.||..-|. |..+.+.-..- ..+-|.-|- .|.+|-+.++. +.+.+|.++|+|+ ..|+--
T Consensus 144 ~~g~~~i~fS~pvpHG~~gsklG~Vi~~~I~dg~~~~~~~SDv-qG~~~~e~v~~-il~~~P~ivii~GPPtYL~gr~~~ 221 (294)
T PRK04286 144 RFGGTVIEFSPPVPHGAEGSKLGYVVMVRISDGDESFVFASDV-QGPLNDEAVEF-ILEKKPTVVIIGGPPTYLLYRVSG 221 (294)
T ss_pred EECCEEEEECCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCC-CCCCCHHHHHH-HHHCCCCEEEECCCCHHHHHHCCH
T ss_conf 8788889966887789888855679999997497689980556-67687899999-986399989967984565220467
Q ss_pred ----CCHHHHHHHHHHCCCEEEECC
Q ss_conf ----637999988641797899186
Q gi|254780349|r 188 ----WDWERFRSIADSIGAYLMADI 208 (433)
Q Consensus 188 ----~d~~~l~eIa~~~ga~l~~D~ 208 (433)
--++-+.+|+++.+..++.|=
T Consensus 222 ~~le~~i~Nl~~ii~~~~~~lIlDH 246 (294)
T PRK04286 222 EDLEKGIENLERIILLRPKTLILDH 246 (294)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 6699999999999981898799814
No 351
>TIGR02034 CysN sulfate adenylyltransferase, large subunit; InterPro: IPR011779 Metabolic assimilation of sulphur from inorganic sulphate, requires sulphate activation by coupling to a nucleoside, for the production of high-energy nucleoside phosphosulphates. This pathway appears to be similar in all prokaryotic organisms. Activation is first achieved through sulphation of sulphate with ATP by sulphate adenylyltransferase (ATP sulphurylase) to produce 5'-phosphosulphate (APS), coupled by GTP hydrolysis. Subsequently, APS is phosphorylated by an APS kinase to produce 3'-phosphoadenosine-5'-phosphosulphate (PAPS) . In Escherichia coli, ATP sulphurylase is a heterodimer composed of two subunits encoded by cysD and cysN, with APS kinase encoded by cysC. These genes are located in a unidirectionally transcribed gene cluster, and have been shown to be required for the synthesis of sulphur-containing amino acids . Homologous to this E. coli activation pathway are nodPQH gene products found among members of the Rhizobiaceae family. These gene products have been shown to exhibit ATP sulphurase and APS kinase activity, yet are involved in Nod factor sulphation, and sulphation of other macromolecules . With members of the Rhizobiaceae family, nodQ often appears as a fusion of cysN (large subunit of ATP sulphurase) and cysC (APS kinase) , .; GO: 0016772 transferase activity transferring phosphorus-containing groups.
Probab=84.20 E-value=0.57 Score=27.29 Aligned_cols=103 Identities=16% Similarity=0.342 Sum_probs=77.9
Q ss_pred HHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HHH
Q ss_conf 6978589999999999999983888104301029899998305102-88657988875336006799999999999-998
Q gi|254780349|r 13 SLIESDPDVFSLIGQESCRQNDEIQLIASENIVSRAVLEAQGSILT-NKYAEGYPSKRYYGGCQYVDDIENIAIER-AKK 90 (433)
Q Consensus 13 ~l~~~Dpei~~~i~~e~~rq~~~l~LiASEN~~S~~v~~~l~S~l~-nkyaeG~pg~ryy~G~~~~d~iE~la~~~-a~~ 90 (433)
=|...|.++|+-|+++-..-...|+=+.+-.+++-+++ .|--++ ++-.. .-+|.|-..++.+|...+++ ...
T Consensus 144 DLvdyd~~vF~~I~~~y~~fa~~L~g~~~~~~iP~SAL--~GdNv~y~~S~~----MpWY~GPtLle~LEtv~~~~G~~~ 217 (411)
T TIGR02034 144 DLVDYDEEVFENIKKDYLAFAEQLAGVRDVTFIPLSAL--KGDNVVYSRSES----MPWYSGPTLLEHLETVEVERGDAQ 217 (411)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC--CCCCEEECCCCC----CCCCCCCCHHHHCCCCCCCCCCCC
T ss_conf 11476578899999999999986389834799873313--687402256678----887578806530040000367422
Q ss_pred HCCCC---------CE-ECCCHHHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 71886---------30-10000167999999998315487488123
Q gi|254780349|r 91 LFNVN---------FV-NVQSHSGSQMNQGVFLALMHPGDSFMGLS 126 (433)
Q Consensus 91 lF~a~---------~a-nvqp~SG~~An~av~~ALl~pGD~Il~~~ 126 (433)
--+.+ +. +-|-+||+.|. +-++|||+|..+|
T Consensus 218 ~~~lRfPVQyVnRPn~tdFRGyaGt~as-----G~v~~Gd~v~vlP 258 (411)
T TIGR02034 218 DLPLRFPVQYVNRPNLTDFRGYAGTIAS-----GSVKVGDEVVVLP 258 (411)
T ss_pred CCCCEEEEEEEECCCCCCCCCHHHHEEC-----CEECCCCEEEEEE
T ss_conf 4787200456526888666522231022-----5534598899962
No 352
>KOG1907 consensus
Probab=84.15 E-value=2 Score=23.51 Aligned_cols=111 Identities=24% Similarity=0.272 Sum_probs=72.2
Q ss_pred EEECCCCHHHHHHHHCCCCCCC--CCCE-EEECCCCCCCCCCCEEEEECCCCHHHHCCHHH-CHHHHHHHHHHHHHHHHH
Q ss_conf 9918620124432000123220--0235-67404565225674489833620565016646-543223445566689999
Q gi|254780349|r 204 LMADISHISGLVVGGQHPSPVP--HCHI-VTTTTHKSLRGPRGGLIMTNHADLAKKINSAI-FPGLQGGPFMHSIAAKAV 279 (433)
Q Consensus 204 l~~D~aH~~GLIa~g~~~~Pl~--~ADv-vt~sTHKtl~GPrgGiI~~~~~e~~~~i~~av-fPg~qg~~~~~~iaa~av 279 (433)
-.+|-+ +.||||-.++--|+. .||| ||+++|-..-| +++-+... -+.--||-+- --..++-..||-++|+-.
T Consensus 672 tkvDRs-VtGLiaqqQ~VGPlqvplADvavt~~S~~~~tG--~A~amGeq-Pik~Lida~a~ARm~VaE~l~NLv~a~i~ 747 (1320)
T KOG1907 672 TKVDRS-VTGLIAQQQCVGPLQVPLADVAVTATSHFDTTG--EAVAMGEQ-PIKALIDAAASARMCVAEALMNLVAAKIT 747 (1320)
T ss_pred EECCCH-HHHEEEHHHCCCCCCCCCEEEEEEEEEEECCCC--CCCCCCCC-CHHHHHCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 522510-110221111047632420213678888761556--10003664-64766087777678999999876741365
Q ss_pred HHHHHH---------CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 999973---------564899999999888999999861685233458889
Q gi|254780349|r 280 AFGEAL---------SSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDN 321 (433)
Q Consensus 280 al~Ea~---------~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~ 321 (433)
+|.... +..+ -..+..+-.++|+..|.+.|+.|-. |-|+
T Consensus 748 sL~dvK~SgNWM~aak~~G--EGarlydAv~aL~~~L~eLgiAIdg-GKDS 795 (1320)
T KOG1907 748 SLKDVKLSGNWMWAAKHPG--EGARLYDAVQALCLGLCELGIAIDG-GKDS 795 (1320)
T ss_pred CHHHEEECCCEEECCCCCC--CCHHHHHHHHHHHHHHHHHCEEECC-CCCC
T ss_conf 0432020253521056998--4047999999999999981531037-8520
No 353
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=83.35 E-value=2.3 Score=23.05 Aligned_cols=49 Identities=20% Similarity=0.322 Sum_probs=33.6
Q ss_pred HHHHHHHHCCCEEEE--ECCCCC----CCCCHHHHHHHHHHCCCEEEECCCCHHH
Q ss_conf 999998604667897--055243----5363799998864179789918620124
Q gi|254780349|r 165 IESLAIEYNPKLIIV--GGTAYS----RVWDWERFRSIADSIGAYLMADISHISG 213 (433)
Q Consensus 165 ~~~~a~~~kPklIi~--G~S~y~----~~~d~~~l~eIa~~~ga~l~~D~aH~~G 213 (433)
++++...-..++++| |.+.|- ...|+..+-.+-++.|..+++|.+|..|
T Consensus 142 ~eki~~~Gn~~i~l~ERG~~gy~~~~rn~~d~~~ip~~~~~~~~PVi~D~SHs~G 196 (250)
T PRK13397 142 LSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTG 196 (250)
T ss_pred HHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 9999965998289982898755563125700777799996159998992875478
No 354
>TIGR00732 dprA DNA protecting protein DprA; InterPro: IPR003488 The SMF family (DNA processing chain A, dprA) are a group of bacterial proteins. In Helicobacter pylori, dprA is required for natural chromosomal and plasmid transformation .; GO: 0009294 DNA mediated transformation.
Probab=82.14 E-value=2.1 Score=23.34 Aligned_cols=19 Identities=42% Similarity=0.494 Sum_probs=11.8
Q ss_pred HHHHHHHHHHCCCCCCCCC
Q ss_conf 8999999861685233458
Q gi|254780349|r 300 SQALAKKLQFLGFDIVSGG 318 (433)
Q Consensus 300 A~~La~~L~~~G~~vv~gg 318 (433)
++.|+++|.++|+.||||+
T Consensus 78 ~~~l~~~la~~G~~IvSGl 96 (238)
T TIGR00732 78 TRKLSKELAKNGVTIVSGL 96 (238)
T ss_pred HHHHHHHHHHCCCEEEECH
T ss_conf 9999999865794898640
No 355
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=80.60 E-value=5 Score=20.77 Aligned_cols=114 Identities=19% Similarity=0.233 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCHHHH--HHHHHHHCCCEEEE
Q ss_conf 1679999999983154874881233448411147665433333-22013665832356598999--99998604667897
Q gi|254780349|r 103 SGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKW-FKAIPYNVRKEDGLLDMHEI--ESLAIEYNPKLIIV 179 (433)
Q Consensus 103 SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~-~~~~~y~~d~~~~~ID~d~~--~~~a~~~kPklIi~ 179 (433)
|-+.||+++.+| +-|.+||...-+ ..|-+..++.|+. +.++.+ +...+ ...+++ ++...+ ...-|.|
T Consensus 14 STttaNl~aaLA--~~G~kVl~IgcD----pk~Dst~~L~g~~~~tvld~-l~~~~--~~~~~~~~~d~v~~-g~~gv~c 83 (267)
T cd02032 14 STTSSNLSVALA--KRGKKVLQIGCD----PKHDSTFTLTGFLIPTVIDI-LEEVD--FHYEELWPEDVIYE-GYGGVDC 83 (267)
T ss_pred HHHHHHHHHHHH--HCCCEEEEECCC----CCHHHHHHHCCCCCCCHHHH-HHHHC--CCHHHCCHHHHHHC-CCCCCEE
T ss_conf 778999999999--879959997789----95155675269886839999-98608--86664147787530-7678457
Q ss_pred ECCCCCC--------C--CCHHHHHHH--HHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCEE
Q ss_conf 0552435--------3--637999988--6417978991862012443200012322002356
Q gi|254780349|r 180 GGTAYSR--------V--WDWERFRSI--ADSIGAYLMADISHISGLVVGGQHPSPVPHCHIV 230 (433)
Q Consensus 180 G~S~y~~--------~--~d~~~l~eI--a~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvv 230 (433)
=.|--|- - .-++.+.++ -++. -++++| ++|=|..|-|..|+.+||-+
T Consensus 84 vEaGgP~pg~Gcagrgi~~~~~lL~~l~~~~~~-D~Vl~D---vlgdVvcgGFa~pi~~Ad~~ 142 (267)
T cd02032 84 VEAGGPPAGAGCGGYVVGETVKLLKELNLFEEY-DVILFD---VLGDVVCGGFAAPLNYADYA 142 (267)
T ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC-CEEEEE---CCCCCCCCCCCCCCCCCCEE
T ss_conf 665899999887764048999999871664347-789995---36654456656761006889
No 356
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase; InterPro: IPR011284 This entry represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis found in many plant and bacterial species. This enzyme is involved in type II fatty acid biosynthesis, where the individual metabolic transformations are carried out by different enzymes rather than by a single enzyme as occurs in type I fatty acid biosynthesis . Structural studies show that the enzyme is a tetramer which forms a typical Rossman fold , . Unlike other members of the short-chain dehydrogenase/reductase superfamily, the enzyme undergoes a marked conformational change upon binding of the NADP(H)cofactor. This conformational change aligns the side chains of the catalytic triad at the active site in an active conformation and increases the affinity of the enzyme for its substrate.; GO: 0004316 3-oxoacyl-[acyl-carrier-protein] reductase activity, 0051287 NAD binding, 0006633 fatty acid biosynthetic process.
Probab=80.51 E-value=5 Score=20.75 Aligned_cols=71 Identities=24% Similarity=0.445 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCC--CC-CCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCC
Q ss_conf 489999999988899999986168523--34-588898126316655676799999888567188037899899998889
Q gi|254780349|r 288 EFRDYAKQIVLNSQALAKKLQFLGFDI--VS-GGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFIT 364 (433)
Q Consensus 288 ~f~~Ya~qvv~NA~~La~~L~~~G~~v--v~-ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~ 364 (433)
.|-+==.=++-=+|.||++|-.||++| |+ ||=+| |++++ ++-+.-+..|++ ||--
T Consensus 146 NYaASKAG~IGftKSlAkElasRnItVNaVAPGFI~T-----dMT~~-L~e~~~~~~l~~---------IPLg------- 203 (238)
T TIGR01830 146 NYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIET-----DMTDK-LSEKVKKAMLSQ---------IPLG------- 203 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC-----CCCHH-CCHHHHHHHHHC---------CCCC-------
T ss_conf 7888875589999999986036870588874899897-----00021-698899999852---------7723-------
Q ss_pred CCCCCCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 8512246667307999899999999999
Q gi|254780349|r 365 SGIRLGTPSGTTRGFKEKDFEYIGELIA 392 (433)
Q Consensus 365 sGiRlGT~aiTtrG~~e~em~~iA~li~ 392 (433)
|+|+|| |+..+..|++
T Consensus 204 ---R~G~pE---------eVA~~v~FLA 219 (238)
T TIGR01830 204 ---RFGTPE---------EVANAVAFLA 219 (238)
T ss_pred ---CCCCHH---------HHHHHHHHHC
T ss_conf ---267765---------6999999732
No 357
>KOG3843 consensus
Probab=79.31 E-value=5.4 Score=20.49 Aligned_cols=309 Identities=17% Similarity=0.223 Sum_probs=154.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCC---CEECCCHHHHHHHHHHHHHH--HCCCCEE-EECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 600679999999999999871886---30100001679999999983--1548748-81233448411147665433333
Q gi|254780349|r 72 GGCQYVDDIENIAIERAKKLFNVN---FVNVQSHSGSQMNQGVFLAL--MHPGDSF-MGLSLDSGGHLTHGSSVNMSGKW 145 (433)
Q Consensus 72 ~G~~~~d~iE~la~~~a~~lF~a~---~anvqp~SG~~An~av~~AL--l~pGD~I-l~~~l~~GGHlshg~~~~~~g~~ 145 (433)
.|......|-+--..-+..|.|.- .+-|-|+.--+.-...|.++ -+|..+- +-+..++-.-+- +.--.+
T Consensus 50 ~gssll~~isne~a~~~i~l~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~k-----si~~ag 124 (432)
T KOG3843 50 AGSSLLACISNEFAKDAIHLAGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFK-----SIIHAG 124 (432)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHH-----HHHHCC
T ss_conf 016799998889999999884056541046885356630889999886138766178988504287889-----998627
Q ss_pred CCC--CCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECC---CC-C-CCCCHHHHHHHHHHCCCEEEECCC------CHH
Q ss_conf 220--1366583235659899999998604667897055---24-3-536379999886417978991862------012
Q gi|254780349|r 146 FKA--IPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGT---AY-S-RVWDWERFRSIADSIGAYLMADIS------HIS 212 (433)
Q Consensus 146 ~~~--~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S---~y-~-~~~d~~~l~eIa~~~ga~l~~D~a------H~~ 212 (433)
|+. +.--.|.+...-|++.+++++++.-|.-|.|=-| .| | -|-+++++..||-.+....++..| ..+
T Consensus 125 fepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i 204 (432)
T KOG3843 125 FEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECI 204 (432)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCHHHHH
T ss_conf 77456313456307777699999999974876289995055335789975199999998705862553232123549999
Q ss_pred HHHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEEEEC-CCCHHHHCCHHHCHHHHHH-HHHHHHHHHH----HHHHHH--
Q ss_conf 4432000123220023567404565225674489833-6205650166465432234-4556668999----999997--
Q gi|254780349|r 213 GLVVGGQHPSPVPHCHIVTTTTHKSLRGPRGGLIMTN-HADLAKKINSAIFPGLQGG-PFMHSIAAKA----VAFGEA-- 284 (433)
Q Consensus 213 GLIa~g~~~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~-~~e~~~~i~~avfPg~qg~-~~~~~iaa~a----val~Ea-- 284 (433)
-+|+++. -..-.|-+.-|..|.|.-|-||-|..- ++.+.+.| ...+||--+. |-...+.-+. -+|+|-
T Consensus 205 ~~iaa~~---~~grida~vqsldknf~vpvggaiia~fk~n~iq~i-ak~ypgrasa~ps~dllitll~~gqn~f~e~~~ 280 (432)
T KOG3843 205 HKIAAAA---ECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQEI-AKMYPGRASASPSLDLLITLLSLGQNAFKELFG 280 (432)
T ss_pred HHHHHHH---HHCCHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHH-HHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHHH
T ss_conf 9999886---505198999975026410034457668677799999-986899666685088999999822167888887
Q ss_pred -HCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCEEEECC-CCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCC
Q ss_conf -35648999999998889999998616852334-588898126316-655676799999888567188037899899998
Q gi|254780349|r 285 -LSSEFRDYAKQIVLNSQALAKKLQFLGFDIVS-GGTDNHLMLVDL-RSKRMTGKRAESILGRVSITCNKNSIPFDPESP 361 (433)
Q Consensus 285 -~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~-ggTd~H~vlvdl-~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~ 361 (433)
..+-|.....|+++-|.+..+.|.+-.-+-++ .-| +--+|- +.+.+ ...-..|-.-||+--| .||... ..
T Consensus 281 eqkemf~~l~~ki~~~ae~~~e~l~~~p~n~is~amt---l~ti~~~k~kav--t~~gsilfak~isgar-vv~~~q-~k 353 (432)
T KOG3843 281 EQKEMFLKLRNKIIKFAEAIGECLLETPENEISLAMT---LKTIDEAKDKAV--TLFGSILFAKGISGAR-VVPLGQ-MK 353 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH---HCCCCHHHHHHH--HHHHHHHHHCCCCCCE-EEECCC-CC
T ss_conf 7999999999999999998613542289853535532---513886776689--9988788751566745-865354-40
Q ss_pred CCCCC---CCCC----------CHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 88985---1224----------66673079998999999999999960
Q gi|254780349|r 362 FITSG---IRLG----------TPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 362 ~~~sG---iRlG----------T~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
..-+| +-+| .++...-||+..|.++.-+-+.+.+.
T Consensus 354 ttieg~ef~~f~sht~e~~~~yln~a~aigm~~hdld~~~~rl~~~~a 401 (432)
T KOG3843 354 TTIEGCEFIGFGSHTNEQHCAYLNAACAIGMKDHDLDEFFNRLDRCLA 401 (432)
T ss_pred EEEECEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 024032776123356757526755777607717579999999999999
No 358
>PRK09275 aspartate aminotransferase; Provisional
Probab=78.81 E-value=5.6 Score=20.39 Aligned_cols=340 Identities=17% Similarity=0.185 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHHHHHCCCCC----E
Q ss_conf 999999999983888104301029899998305102886579888753360067999999999-99998718863----0
Q gi|254780349|r 23 SLIGQESCRQNDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAI-ERAKKLFNVNF----V 97 (433)
Q Consensus 23 ~~i~~e~~rq~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~-~~a~~lF~a~~----a 97 (433)
+++.+-...-++.+.+-+. ..|-+..-+++++-|- .|.+ ..-..|.+.. -+.+++|+-.. .
T Consensus 101 ~fL~~~~~y~~~~~g~d~d-----~~v~El~dgiiGdnYP--vP~R-------mL~~~E~Iv~~YL~~em~~~~~~~~~f 166 (531)
T PRK09275 101 DFLRAAISYVRDELGFDPD-----EFVYEMVDGIIGDNYP--VPDR-------MLVHTEKIVKDYLRQEMCGNRPPPGEF 166 (531)
T ss_pred HHHHHHHHHHHHHHCCCHH-----HHHHHHHHHHHCCCCC--CCHH-------HHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 9999999999988699988-----9999999886338899--9678-------889899999999999962899998873
Q ss_pred ECCCH-HHHHHHHHHHHHH-----HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHH
Q ss_conf 10000-1679999999983-----154874881233448411147665433333220136658323-5659899999998
Q gi|254780349|r 98 NVQSH-SGSQMNQGVFLAL-----MHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-GLLDMHEIESLAI 170 (433)
Q Consensus 98 nvqp~-SG~~An~av~~AL-----l~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~~ID~d~~~~~a~ 170 (433)
++=+. .|+.|+.-+|-+| ++|||+|-.+..-.-=.| .-+.+.-..++.+....++++ .++.-++++++..
T Consensus 167 dlFatEGgTAAM~YiF~sL~~N~LL~~GDkIAi~~PIFTPYl---EIP~L~~Y~l~vV~i~a~~~~~WQy~d~EleKL~D 243 (531)
T PRK09275 167 DLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYL---EIPELPDYDLEVVHISADEKNEWQYPDKELEKLRD 243 (531)
T ss_pred CEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC---CCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCC
T ss_conf 167416720579999999997588788987899567777630---16776667862899855654588779899987449
Q ss_pred HHCCCEE-EEECCC----CCCCCCHHHHHHHHHHCC--CEEEECCCCHHHHHHHHCCCC---CCCCCCEEEECCCCCCC-
Q ss_conf 6046678-970552----435363799998864179--789918620124432000123---22002356740456522-
Q gi|254780349|r 171 EYNPKLI-IVGGTA----YSRVWDWERFRSIADSIG--AYLMADISHISGLVVGGQHPS---PVPHCHIVTTTTHKSLR- 239 (433)
Q Consensus 171 ~~kPklI-i~G~S~----y~~~~d~~~l~eIa~~~g--a~l~~D~aH~~GLIa~g~~~~---Pl~~ADvvt~sTHKtl~- 239 (433)
-+-|.+ ++-.|. -.-...+++|++|.++.. -.++-|-- -|-.+ .-|.| -+|+--+..-|--|-|+
T Consensus 244 -P~IKAlf~VNPsNP~S~~ls~e~l~~i~~IV~~~nPdLmIiTDDV--YgTF~-~~F~Sl~a~~P~NTi~VYSfSKyFGa 319 (531)
T PRK09275 244 -PSIKALFVVNPSNPPSVAMSDESLEKIADIVKEDRPDLMIITDDV--YGTFV-DDFRSLFAELPYNTLLVYSFSKYFGA 319 (531)
T ss_pred -CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCC--CCCCC-CCCEEHHHHCCCCEEEEEEEHHCCCC
T ss_conf -771189998999986665699999999999974299879995465--32264-56463656488754788863100588
Q ss_pred -CCCCEEEEECCCC----------------HHHH-------------CCHHHCHHHHHHHHHHHHHHHH---------HH
Q ss_conf -5674489833620----------------5650-------------1664654322344556668999---------99
Q gi|254780349|r 240 -GPRGGLIMTNHAD----------------LAKK-------------INSAIFPGLQGGPFMHSIAAKA---------VA 280 (433)
Q Consensus 240 -GPrgGiI~~~~~e----------------~~~~-------------i~~avfPg~qg~~~~~~iaa~a---------va 280 (433)
|=|=|.|...+.. +.+| ||+-|.---| --+|+.||+. .+
T Consensus 320 TGWRLG~Ialh~~NvfD~~i~~Lp~~~k~~L~~RY~~lt~~P~~lkFIDRlVADSR~--VALnHTAGLStPQQvqM~LFs 397 (531)
T PRK09275 320 TGWRLGVIALHEDNVFDKLIAELPEEKKKELDKRYSSLTTEPEKLKFIDRLVADSRQ--VALNHTAGLSTPQQVQMALFS 397 (531)
T ss_pred CCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH--HHHHHHCCCCCHHHHHHHHHH
T ss_conf 441103445410330779998668878999998775546882335406776521788--887660378809999999999
Q ss_pred HHHHHCHHHHHHHHHHHHHH-HHHHHHHHHCCCCCCCCCCCC-CEEEECCCC--CCCCHHHHHHH--------------H
Q ss_conf 99973564899999999888-999999861685233458889-812631665--56767999998--------------8
Q gi|254780349|r 281 FGEALSSEFRDYAKQIVLNS-QALAKKLQFLGFDIVSGGTDN-HLMLVDLRS--KRMTGKRAESI--------------L 342 (433)
Q Consensus 281 l~Ea~~~~f~~Ya~qvv~NA-~~La~~L~~~G~~vv~ggTd~-H~vlvdl~~--~~~~G~~a~~~--------------L 342 (433)
+-. +-++...|-+++.+-- +.+..-+...|+.+....+.. .-.++|+.. ...-|+++.+. .
T Consensus 398 l~~-L~d~~~~Yk~~~~~ii~~R~~~L~~~lg~~~~~~~~~~~YYt~idl~~~a~~~yg~~F~~~l~~~~~p~d~lfrLA 476 (531)
T PRK09275 398 LFS-LLDEEDAYKKAMKDIIRRRYKALYEGLGLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFAEYLKKNYSPLDLLFRLA 476 (531)
T ss_pred HHH-HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHH
T ss_conf 998-6277338999999999999999998549998889876552456609999998767899999997288888999999
Q ss_pred HHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 343 GRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 343 e~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
++.||.+ -++--|+... -.+|+..+. +.++|...|+.-|.++++
T Consensus 477 ~e~~vVL-l~G~GF~~p~----ws~RVSLAN-----L~~~dY~~IG~~i~~~l~ 520 (531)
T PRK09275 477 EETGIVL-LPGGGFGGPE----WSLRVSLAN-----LNEEDYAKIGKSIRKLLD 520 (531)
T ss_pred HHCCEEE-ECCCCCCCCC----CCEEEEECC-----CCHHHHHHHHHHHHHHHH
T ss_conf 8737899-5588779998----625887368-----998899999999999999
No 359
>TIGR02875 spore_0_A sporulation transcription factor Spo0A; InterPro: IPR012052 Members of this group are response regulators/transcription factors that contain CheY-like receiver (phosphoacceptor) domain and a unique DNA-binding domain. Spo0A controls the entry of Bacillus subtilis into the developmental process of sporulation . Activation of the Spo0A transcription factor by phosphorylation serves as a developmental checkpoint and to integrate several physiological signals that control entry into the sporulation pathway. The signals are generated by conditions of nutrient deprivation, high cell density, the Krebs cycle, DNA replication, DNA damage, and some aspect of the chromosome partitioning machinery . Activated Spo0A has multiple functions . It represses promoters (such as the abrB promoter) by binding to sites (0A boxes) downstream from the transcription start site. Spo0A also activates transcription from promoters used by two forms of RNA polymerase that differ by containing either the major sigma factor, sigma A (e.g. the spoIIE and spoIIG promoters) or the alternate sigma factor, sigma H (e.g. the spoIIA promoter). At promoters activated by Spo0A, the 0A boxes lie upstream of the transcription-initiation site.; GO: 0003677 DNA binding, 0005509 calcium ion binding, 0000160 two-component signal transduction system (phosphorelay), 0042173 regulation of sporulation, 0045449 regulation of transcription, 0050906 detection of stimulus during sensory perception.
Probab=78.14 E-value=2.9 Score=22.37 Aligned_cols=38 Identities=24% Similarity=0.670 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHCCCEEE---------------EECCCCC-CCCCHH----HHHHHHHH
Q ss_conf 89999999860466789---------------7055243-536379----99988641
Q gi|254780349|r 162 MHEIESLAIEYNPKLII---------------VGGTAYS-RVWDWE----RFRSIADS 199 (433)
Q Consensus 162 ~d~~~~~a~~~kPklIi---------------~G~S~y~-~~~d~~----~l~eIa~~ 199 (433)
+|++.+.....+||+|+ +|++.|. +|+|++ |+|+++..
T Consensus 67 LEKl~~~~~~~~P~vi~LsAfGQE~ITqrA~~LGADYYvlKPfDle~L~~RIRQl~~~ 124 (270)
T TIGR02875 67 LEKLNEIELKARPRVIMLSAFGQEKITQRAVALGADYYVLKPFDLEILAARIRQLAEG 124 (270)
T ss_pred HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHCC
T ss_conf 9998898874489588852237558999999728981566504178899999986246
No 360
>KOG1138 consensus
Probab=78.11 E-value=5.6 Score=20.43 Aligned_cols=133 Identities=16% Similarity=0.161 Sum_probs=73.1
Q ss_pred HHHHHCCCCCC-CC--CCCCCCCCCCCCH--HHHHHHHHHHHHHHHHCCC------CCEECCCHHHHHHHHHHHHHHHCC
Q ss_conf 99830510288-65--7988875336006--7999999999999987188------630100001679999999983154
Q gi|254780349|r 50 LEAQGSILTNK-YA--EGYPSKRYYGGCQ--YVDDIENIAIERAKKLFNV------NFVNVQSHSGSQMNQGVFLALMHP 118 (433)
Q Consensus 50 ~~~l~S~l~nk-ya--eG~pg~ryy~G~~--~~d~iE~la~~~a~~lF~a------~~anvqp~SG~~An~av~~ALl~p 118 (433)
.+-+.+..-|+ |. +-||+..+-.-+. ..+.+-.+ -.+=|.. .|...|- |-.+.+.-++++ .|
T Consensus 345 aEwls~akqnkvylpe~p~~hs~lI~~~rlkiy~sl~g~----fSndfrqpcvvf~~H~SlRf--gdv~h~~e~~g~-sp 417 (653)
T KOG1138 345 AEWLSLAKQNKVYLPEAPFPHSTLITINRLKIYLSLLGL----FSNDFRQPCVVFMGHPSLRF--GDVVHFLECWGL-SP 417 (653)
T ss_pred HHHHHHHHCCCEECCCCCCCCCEEEEECCEEEHHHHHHH----HHHHCCCCEEEECCCCCHHH--HHHHHHHHHHCC-CC
T ss_conf 999976331404356899987558750632325889988----76651266057627853003--378999999647-98
Q ss_pred CCEEEECCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHH
Q ss_conf 8748812334484111476-654333332201366583235659899999998604667897055243536379999886
Q gi|254780349|r 119 GDSFMGLSLDSGGHLTHGS-SVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIA 197 (433)
Q Consensus 119 GD~Il~~~l~~GGHlshg~-~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa 197 (433)
...|+..+.+ ++.+- ..-|.-.--.++..++| -.+|+.++.+++++.+||.++| .++|-+|++.+..+-|-
T Consensus 418 ~NsvI~tdpD----~~~~~vl~PfrpLamK~i~cpid---trlnfqql~kLlkelqPk~vlc-peaytqp~~~ap~~~i~ 489 (653)
T KOG1138 418 KNSVIFTDPD----FSYLLVLAPFRPLAMKIIYCPID---TRLNFQQLPKLLKELQPKIVLC-PEAYTQPIPLAPIKTIS 489 (653)
T ss_pred CCCEEEECCC----CCHHHHHCCCCCCCCEEEECCCC---CCCCHHHHHHHHHHHCCCEEEC-HHHHCCCCCCCCHHEEH
T ss_conf 8756885799----75355525776542036864530---3436788999999738878988-25606888766300000
No 361
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process.
Probab=77.86 E-value=4 Score=21.41 Aligned_cols=62 Identities=23% Similarity=0.312 Sum_probs=41.2
Q ss_pred CHHHHHHHHHHHCCCEEEEECCCCC------------CCCC---HHHHHHHHHHCCCEEEE-------CCCCHHHHHHHH
Q ss_conf 9899999998604667897055243------------5363---79999886417978991-------862012443200
Q gi|254780349|r 161 DMHEIESLAIEYNPKLIIVGGTAYS------------RVWD---WERFRSIADSIGAYLMA-------DISHISGLVVGG 218 (433)
Q Consensus 161 D~d~~~~~a~~~kPklIi~G~S~y~------------~~~d---~~~l~eIa~~~ga~l~~-------D~aH~~GLIa~g 218 (433)
|.|.++++++..+|.+||= .-+|. |-+| ...|+++|.++|+++++ |+- -||
T Consensus 48 dP~~l~~~~r~~~Pd~vvn-tAAYT~VD~AE~~~~~AyavNa~A~~~lA~~A~~~Ga~~vh~STDYVFDGd------fGG 120 (317)
T TIGR01214 48 DPEALEELLRAIRPDAVVN-TAAYTDVDGAESDPEKAYAVNALAPQNLARAAARVGARLVHISTDYVFDGD------FGG 120 (317)
T ss_pred CHHHHHHHHHHHCCCEEEE-CCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECEEECCC------CCC
T ss_conf 4688999998528753762-301101000037777876574078999999998669159998634234475------578
Q ss_pred CCCCCCCCCCE
Q ss_conf 01232200235
Q gi|254780349|r 219 QHPSPVPHCHI 229 (433)
Q Consensus 219 ~~~~Pl~~ADv 229 (433)
.-.+|..+-|.
T Consensus 121 ~~~~PY~e~D~ 131 (317)
T TIGR01214 121 EGKRPYREDDE 131 (317)
T ss_pred CCCCCCCCCCC
T ss_conf 88668876468
No 362
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase; InterPro: IPR012773 Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (2.6.1.76 from EC) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore (Q9Z3R2 from SWISSPROT) or 1,3-diaminopropane (P44951 from SWISSPROT) biosynthesis. Ectoine is a compatible solute particularly effective in conferring salt tolerance.; GO: 0030170 pyridoxal phosphate binding, 0047307 diaminobutyrate-pyruvate transaminase activity, 0019491 ectoine biosynthetic process.
Probab=77.77 E-value=6 Score=20.19 Aligned_cols=245 Identities=18% Similarity=0.239 Sum_probs=130.6
Q ss_pred CCCC-EECCCHHHHHHHHHHHHHH--HCCCCEEEECCCCCCCCCCCCC---CCC-----CC-CCCCCCCCCCCCCCC-CC
Q ss_conf 8863-0100001679999999983--1548748812334484111476---654-----33-333220136658323-56
Q gi|254780349|r 93 NVNF-VNVQSHSGSQMNQGVFLAL--MHPGDSFMGLSLDSGGHLTHGS---SVN-----MS-GKWFKAIPYNVRKED-GL 159 (433)
Q Consensus 93 ~a~~-anvqp~SG~~An~av~~AL--l~pGD~Il~~~l~~GGHlshg~---~~~-----~~-g~~~~~~~y~~d~~~-~~ 159 (433)
+.+| +--=-..|++|.-+++.=- .+--..|+++.=..=| +|-|+ ..| -. .-.-++.++|+|--- +.
T Consensus 96 ~LdYK~qFpGPTGTNaVEsAlKLARKvtGR~nvvaFTNaFHG-mt~GsLsvTGN~~~R~~aG~~~~~v~~mPYDgY~~~~ 174 (413)
T TIGR02407 96 GLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVAFTNAFHG-MTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGE 174 (413)
T ss_pred CCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHH-HHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCC
T ss_conf 789515688878640799999998503898406885177302-3489888643344430267447782568765577864
Q ss_pred CC-HHHHHHHHHH-----HCCCEEEEE------C-CCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC
Q ss_conf 59-8999999986-----046678970------5-524353637999988641797899186201244320001232200
Q gi|254780349|r 160 LD-MHEIESLAIE-----YNPKLIIVG------G-TAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH 226 (433)
Q Consensus 160 ID-~d~~~~~a~~-----~kPklIi~G------~-S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ 226 (433)
+| ..-+|++... .+|.-||+- + -+=+.++ +++|++||++++.+|+||==|. |-==+|-|=| |+.
T Consensus 175 ~D~~~Yfe~~L~D~sSGvd~PAAvILETVQGEGGiNvAs~eW-Lq~l~~lCr~~DILLIVDDIQa-GCGRTG~FFS-FE~ 251 (413)
T TIGR02407 175 VDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASKEW-LQRLEKLCRRHDILLIVDDIQA-GCGRTGTFFS-FEP 251 (413)
T ss_pred CCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCHHH-HHHHHHHHHHCCCEEEEEEEEC-CCCCCCCCCC-CCC
T ss_conf 322899998617888984767258981103757703123557-9999999986498687731741-8888789645-344
Q ss_pred C----CEEEECCCCCCCC---CCCEEEEEC-CCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHH--HHHHHHH
Q ss_conf 2----3567404565225---674489833-6205650166465432234455666899999999735648--9999999
Q gi|254780349|r 227 C----HIVTTTTHKSLRG---PRGGLIMTN-HADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEF--RDYAKQI 296 (433)
Q Consensus 227 A----Dvvt~sTHKtl~G---PrgGiI~~~-~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f--~~Ya~qv 296 (433)
| |+||-| ||+.| |= .++|-| +-|.|+- +-.-|+=.|-.+.=|||.| |++..| .+-.++|
T Consensus 252 AgI~PDiVcLS--KSisG~GLPl-al~L~kPe~D~W~P---GEHNGTFRGNNlAFVtA~a-----AL~~yW~Dd~f~~~v 320 (413)
T TIGR02407 252 AGIEPDIVCLS--KSISGYGLPL-ALVLIKPELDVWKP---GEHNGTFRGNNLAFVTATA-----ALEYYWSDDAFEKAV 320 (413)
T ss_pred CCCCCCEEEEE--CCCCCCCHHH-HHHHHCCCCCCCCC---CCCCCCCCCCCHHHHHHHH-----HHHHHCCCHHHHHHH
T ss_conf 67756617850--2003551268-99973545674678---8778864665278999999-----999848962689999
Q ss_pred HHHHHHHHHHHHHC-------C-CCCCCCCCCCCEEE-ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCC
Q ss_conf 98889999998616-------8-52334588898126-316655676799999888567188037899899
Q gi|254780349|r 297 VLNSQALAKKLQFL-------G-FDIVSGGTDNHLML-VDLRSKRMTGKRAESILGRVSITCNKNSIPFDP 358 (433)
Q Consensus 297 v~NA~~La~~L~~~-------G-~~vv~ggTd~H~vl-vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~ 358 (433)
-++++.+.+.|.+- + ..+-+=| +|+ |++...++. +++.+.+=+.|.++=.++ |.|.
T Consensus 321 ~~~s~~~~~~l~~~~~~~~~~~~~~~RGRG----lm~Gl~~~~~~~A-~~i~~~aF~~GLiiEtsG-p~De 385 (413)
T TIGR02407 321 QRKSEIIQERLDEIVAEFPELIEKSVRGRG----LMQGLECGDGDLA-GKIAKAAFENGLIIETSG-PEDE 385 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC----EEEECCCCCHHHH-HHHHHHHHHCCCEEEEEC-CCCC
T ss_conf 999999999999999874552131104520----1420004772468-999999864683898718-8984
No 363
>TIGR01440 TIGR01440 conserved hypothetical protein TIGR01440; InterPro: IPR006340 Members of this family are uncharacterised proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome. .
Probab=76.71 E-value=2.7 Score=22.63 Aligned_cols=57 Identities=21% Similarity=0.487 Sum_probs=44.1
Q ss_pred CCCCCHHHHHHHHHHHHHHH-HHCCCCCE--ECCCHHHHHHHHHHHHHHHCC--------------CCEEEECCCC
Q ss_conf 33600679999999999999-87188630--100001679999999983154--------------8748812334
Q gi|254780349|r 70 YYGGCQYVDDIENIAIERAK-KLFNVNFV--NVQSHSGSQMNQGVFLALMHP--------------GDSFMGLSLD 128 (433)
Q Consensus 70 yy~G~~~~d~iE~la~~~a~-~lF~a~~a--nvqp~SG~~An~av~~ALl~p--------------GD~Il~~~l~ 128 (433)
-++|||++.+. |++||-. +-++.|-+ -++.|.|=...+++|.-+-.| |||.++|.+.
T Consensus 64 A~QgCEH~NRA--l~~Er~~ae~~g~E~VsV~P~~hAGGs~~~~AF~~~~dPv~VE~I~a~aGiDIGdT~IGMH~K 137 (172)
T TIGR01440 64 AVQGCEHINRA--LVMERSVAEELGLEEVSVVPDLHAGGSLATYAFKKFKDPVVVEHIKADAGIDIGDTLIGMHVK 137 (172)
T ss_pred EEECCHHHHHH--HHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEE
T ss_conf 86351356788--987177534278458885066444702678888735898789988851355215663132655
No 364
>cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=75.94 E-value=6.7 Score=19.85 Aligned_cols=157 Identities=20% Similarity=0.269 Sum_probs=75.6
Q ss_pred CHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCHHHHCCHHHCHHHHHH
Q ss_conf 37999988641797899186201244320001232200235674045652256744898336205650166465432234
Q gi|254780349|r 189 DWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHIVTTTTHKSLRGPRGGLIMTNHADLAKKINSAIFPGLQGG 268 (433)
Q Consensus 189 d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~avfPg~qg~ 268 (433)
-|+++.+.+++.|+.++.-..|.- ..-+..+.. ..+. |.. . .... ... .-|+ .
T Consensus 83 ~~k~l~d~vh~~g~~i~~QL~H~G-----r~~~~~~~~-~~~~---------~s~-~-~~~~-~~~-----~~~~----~ 135 (338)
T cd04733 83 AFREWAAAAKANGALIWAQLNHPG-----RQSPAGLNQ-NPVA---------PSV-A-LDPG-GLG-----KLFG----K 135 (338)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCC-----CCCCCCCCC-CCCC---------CCC-C-CCCC-CCC-----CCCC----C
T ss_conf 999999999856986999515654-----124500078-9888---------765-5-6766-555-----5789----8
Q ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC----CCCCCCEEEEC---CCCCCCCHHHHHHH
Q ss_conf 455666899999999735648999999998889999998616852334----58889812631---66556767999998
Q gi|254780349|r 269 PFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVS----GGTDNHLMLVD---LRSKRMTGKRAESI 341 (433)
Q Consensus 269 ~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~----ggTd~H~vlvd---l~~~~~~G~~a~~~ 341 (433)
| +|+-.++-++..++-.+-|+ .-.+.||+-|- .|==-||+|-. .|.....|. .|.+
T Consensus 136 p------------~~mt~~eI~~ii~~f~~AA~----rA~~AGfDgVEiH~ahGYLl~qFlS~~~N~RtDeYGGS-~ENR 198 (338)
T cd04733 136 P------------RAMTEEEIEDVIDRFAHAAR----LAQEAGFDGVQIHAAHGYLLSQFLSPLTNKRTDEYGGS-LENR 198 (338)
T ss_pred C------------CCCCHHHHHHHHHHHHHHHH----HHHHCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCC-HHHH
T ss_conf 8------------64899999999999999999----99983999899823655489986298768996857989-8899
Q ss_pred HHHCCEEEE--CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 885671880--37899899998889851224666730799989999999999999
Q gi|254780349|r 342 LGRVSITCN--KNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQI 394 (433)
Q Consensus 342 Le~~gI~~N--kn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~ 394 (433)
+.-.-=++. |..++-| .+=|+||...+.-..|+..+|+.+++.++.+.
T Consensus 199 ~Rf~lEii~avr~~vg~d-----~~v~~Ris~~d~~~~G~~~~d~~~~~~~l~~~ 248 (338)
T cd04733 199 ARLLLEIYDAIRAAVGPG-----FPVGIKLNSADFQRGGFTEEDALEVVEALEEA 248 (338)
T ss_pred HHHHHHHHHHHHHHHCCC-----CEEEEEECHHHHCCCCCCHHHHHHHHHHHHHC
T ss_conf 889999999999971998-----86999845354247999989999999999876
No 365
>TIGR00738 rrf2_super rrf2 family protein (putative transcriptional regulator); InterPro: IPR000944 The following uncharacterised bacterial proteins have been shown to be evolutionary related, Desulphovibrio vulgaris protein Rrf2; Escherichia coli hypothetical proteins yfhP and yjeB; Bacillus subtilis hypothetical proteins yhdE, yrzC and ywgB; Mycobacterium tuberculosis hypothetical protein Rv1287; and Synechocystis strain PCC 6803 hypothetical protein slr0846. These are small proteins of 12 to 18 kD which seem to contain a signal sequence, and may represent a family of probable transcriptional regulators..
Probab=75.23 E-value=1.3 Score=24.84 Aligned_cols=64 Identities=20% Similarity=0.297 Sum_probs=35.7
Q ss_pred CCCCCCCCCEEEEECCC------CHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 56522567448983362------05650166465432234455666899999999735648999999998
Q gi|254780349|r 235 HKSLRGPRGGLIMTNHA------DLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVL 298 (433)
Q Consensus 235 HKtl~GPrgGiI~~~~~------e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~ 298 (433)
=||.|||.||..|.+++ |+-..+|..+-|....+-|...-.+-..|.......+-++....++.
T Consensus 55 V~S~rG~~GGY~L~~~~~~I~~~dvv~a~e~~~~~~~c~~~~~c~~~~~~~C~~~~~w~~~~~~~~~~L~ 124 (133)
T TIGR00738 55 VESVRGPGGGYRLARPPEEITVGDVVRAVEGSLAPVQCIGGNGCHNVGEPVCLLHAVWRELEDAIEDVLR 124 (133)
T ss_pred EECCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 4211589856310775343049888875368510001445788864444422589999999999999852
No 366
>KOG1403 consensus
Probab=74.63 E-value=7.2 Score=19.63 Aligned_cols=338 Identities=19% Similarity=0.247 Sum_probs=178.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCH
Q ss_conf 99999999998388810430102989999830510288657988875336006799999999999998718863010000
Q gi|254780349|r 23 SLIGQESCRQNDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSH 102 (433)
Q Consensus 23 ~~i~~e~~rq~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~ 102 (433)
-+.++|-.|--+|||=+|--....|.|-+|-+--|..... ..|| ..|++-+-|......|=+..-+ .-..
T Consensus 40 YmfDE~g~~yLDCInNVaHvghchp~VV~A~~kQmat~~t----N~RF-----lhd~lv~cA~~l~stlPeLsvc-~F~N 109 (452)
T KOG1403 40 YMFDEEGTRYLDCINNVAHVGHCHPEVVRAGAKQMATIST----NNRF-----LHDELVQCARTLTSTLPELSVC-FFVN 109 (452)
T ss_pred EEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC----CCHH-----HHHHHHHHHHHHHHCCCCCEEE-EEEC
T ss_conf 1115676638887642211255789999999988767504----5246-----6778999999986108785189-9966
Q ss_pred HHHHHHHHHHHH---HHCCCCEEEECCCCCCCCCCCCC-----------CC-------------CCCCCCCCCCCCCCCC
Q ss_conf 167999999998---31548748812334484111476-----------65-------------4333332201366583
Q gi|254780349|r 103 SGSQMNQGVFLA---LMHPGDSFMGLSLDSGGHLTHGS-----------SV-------------NMSGKWFKAIPYNVRK 155 (433)
Q Consensus 103 SG~~An~av~~A---Ll~pGD~Il~~~l~~GGHlshg~-----------~~-------------~~~g~~~~~~~y~~d~ 155 (433)
|||-||-.++.- +.+--| ++.++-+.-||++--. .+ .++|++ +...|+..
T Consensus 110 SGSEANDLALRLAR~ftkhqD-vItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~-r~~~~~~a- 186 (452)
T KOG1403 110 SGSEANDLALRLARNFTKHQD-VITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKF-RDKMYPDA- 186 (452)
T ss_pred CCCHHHHHHHHHHHHHCCCCC-EEEEECHHCCCEEEEEECCCEECCCCCCCCCCCEEEECCCCCCCCCCC-CCCCCCCC-
T ss_conf 886155899999875125675-488730003430014650644306898857876167457863125612-20138766-
Q ss_pred CCCCCCHHHHHHHHHHHCC-----------CEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHH-HHHHHHCCCCC
Q ss_conf 2356598999999986046-----------67897055243536379999886417978991862012-44320001232
Q gi|254780349|r 156 EDGLLDMHEIESLAIEYNP-----------KLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHIS-GLVVGGQHPSP 223 (433)
Q Consensus 156 ~~~~ID~d~~~~~a~~~kP-----------klIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~-GLIa~g~~~~P 223 (433)
+.+..=-|.+++++....- .|--||+...|-.-=|+.+.+-.+..|.+.+.|.-++. |-|-...+.--
T Consensus 187 ~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq 266 (452)
T KOG1403 187 DMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQ 266 (452)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCHHHHHHH
T ss_conf 50044303799999999852775799999999856981358432789999998517976984212104332310354444
Q ss_pred C-CC-CCEEEECCCCCCC-C-CCCEEEEECCCCHHHHCCH-HH--CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf 2-00-2356740456522-5-6744898336205650166-46--54322344556668999999997356489999999
Q gi|254780349|r 224 V-PH-CHIVTTTTHKSLR-G-PRGGLIMTNHADLAKKINS-AI--FPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQI 296 (433)
Q Consensus 224 l-~~-ADvvt~sTHKtl~-G-PrgGiI~~~~~e~~~~i~~-av--fPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qv 296 (433)
. .. -||||.. |... | |-+. +.+.+ |+++.... .| |..+-||| ...-+++||- .+...+...+-++||
T Consensus 267 ~y~fiPDIVtmg--KpmGNGhPVa~-Vattk-eIA~Af~atgv~YFNTyGGnP-VsCAv~laVm-~v~e~E~Lq~ha~~v 340 (452)
T KOG1403 267 TYNFIPDIVTMG--KPMGNGHPVAA-VATTK-EIAQAFHATGVEYFNTYGGNP-VSCAVGLAVM-RVCEDENLQEHAQQV 340 (452)
T ss_pred HHCCCCCHHEEC--CCCCCCCEEEE-EECCH-HHHHHHCCCCCEEHHCCCCCC-HHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_conf 524564330004--65779970268-85368-899985026600000469980-6589999999-997456677889988
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCEEE-ECCC---CCCC-CHHHHH----HHHHHCCEEEECCCCCCC----CCCCCC
Q ss_conf 98889999998616852334588898126-3166---5567-679999----988856718803789989----999888
Q gi|254780349|r 297 VLNSQALAKKLQFLGFDIVSGGTDNHLML-VDLR---SKRM-TGKRAE----SILGRVSITCNKNSIPFD----PESPFI 363 (433)
Q Consensus 297 v~NA~~La~~L~~~G~~vv~ggTd~H~vl-vdl~---~~~~-~G~~a~----~~Le~~gI~~Nkn~iP~D----~~~~~~ 363 (433)
=.---.|-..|+. -+.+++.-----++| ||+- .... +-++|. +.-+..+|.+|-.+ |++ -+||+.
T Consensus 341 G~~L~~lL~~~k~-kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDG-Ph~NilKiKPPmC 418 (452)
T KOG1403 341 GEKLEVLLRRLKQ-KHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADG-PHRNILKIKPPMC 418 (452)
T ss_pred HHHHHHHHHHHHH-HCCCEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEECCC-CCCCEEECCCCCC
T ss_conf 7999999998765-0613101333227885200011123797378799999999886407870689-9876364379843
Q ss_pred CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 985122466673079998999999999999960
Q gi|254780349|r 364 TSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 364 ~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
|.+++..+...-+.++|.
T Consensus 419 ---------------Fneena~e~v~~ld~iLT 436 (452)
T KOG1403 419 ---------------FNEENADEFVLGLDEILT 436 (452)
T ss_pred ---------------CCHHHHHHHHHHHHHHHH
T ss_conf ---------------473129999998999999
No 367
>COG3964 Predicted amidohydrolase [General function prediction only]
Probab=74.19 E-value=4.3 Score=21.18 Aligned_cols=156 Identities=16% Similarity=0.118 Sum_probs=86.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCC--CCEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 753360067999999999999987188630100001679999999983154--874881233448411147665433333
Q gi|254780349|r 68 KRYYGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHP--GDSFMGLSLDSGGHLTHGSSVNMSGKW 145 (433)
Q Consensus 68 ~ryy~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~p--GD~Il~~~l~~GGHlshg~~~~~~g~~ 145 (433)
.-||+|+++-++-..+..++--. .=|..-|--.||+--|.-.+-- .++|.++ | .++..|..
T Consensus 65 Hvy~ggt~~~v~pd~~ga~~GvT------TvVDAGSaGaanf~gF~r~vie~Sr~RI~Af-------l----nvs~~Gl~ 127 (386)
T COG3964 65 HVYYGGTEGGVRPDMYGAPNGVT------TVVDAGSAGAANFDGFYRTVIEASRVRIKAF-------L----NVSPPGLT 127 (386)
T ss_pred EEECCCCCCCCCHHHCCCCCCCE------EEEECCCCCCCCHHHHHHHHHCCHHHEEEEE-------E----ECCCCCEE
T ss_conf 78438975674877706667834------8972677675313567887542023400024-------5----22675312
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEE----ECCC--CCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHC
Q ss_conf 2201366583235659899999998604667897----0552--435363799998864179789918620124432000
Q gi|254780349|r 146 FKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIV----GGTA--YSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQ 219 (433)
Q Consensus 146 ~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~----G~S~--y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~ 219 (433)
.....| |.+ .||.|++.+.+++++--++-+ +.+. -.-..++++=.+||+.-+.-+|+-+.|---|. ..
T Consensus 128 a~nE~~--d~~--nid~d~i~aa~reh~d~ivGlKvR~s~~~~g~~GitPl~la~~ia~~~klPlmvHigePp~~~--dE 201 (386)
T COG3964 128 ASNELY--DPD--NIDEDKIHAAFREHRDVIVGLKVRVSTEDIGEYGITPLTLALRIANDLKLPLMVHIGEPPVLM--DE 201 (386)
T ss_pred EEHHHC--CHH--HCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCH--HH
T ss_conf 021008--812--389789999998585707877887540013346876578999998615996699659999628--88
Q ss_pred CCCCCCCCCEEEECCCCCCCCCCCEEEEECCC
Q ss_conf 12322002356740456522567448983362
Q gi|254780349|r 220 HPSPVPHCHIVTTTTHKSLRGPRGGLIMTNHA 251 (433)
Q Consensus 220 ~~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~ 251 (433)
.-.-|.--||+|...| +.++-|++.+.
T Consensus 202 vlerL~~GDIitHcfn-----gkpn~~l~~dg 228 (386)
T COG3964 202 VLERLRRGDIITHCFN-----GKPNTILTDDG 228 (386)
T ss_pred HHHHCCCCCEEEEECC-----CCCCCCCCCCH
T ss_conf 9976357765654036-----99997226625
No 368
>cd05536 POLBc_B3 DNA polymerase type-B B3 subfamily catalytic domain. Archaeal proteins that are involved in DNA replication are similar to those from eukaryotes. Some members of the archaea also possess multiple family B DNA polymerases (B1, B2 and B3). So far there is no specific function(s) has been assigned for different members of the archaea type B DNA polymerases. Phylogenetic analyses of eubacterial, archaeal, and eukaryotic family B DNA polymerases are support independent gene duplications during the evolution of archaeal and eukaryotic family B DNA polymerases. Structural comparison of the thermostable DNA polymerase type B to its mesostable homolog suggests several adaptations to high temperature such as shorter loops, disulfide bridges, and increasing electrostatic interaction at subdomain interfaces.
Probab=73.08 E-value=6 Score=20.21 Aligned_cols=22 Identities=23% Similarity=0.400 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHCCCCCCCHHHHC
Q ss_conf 9999999999970879999977719
Q gi|254780349|r 409 LTVLHKVQEFVHCFPIYDFSASALK 433 (433)
Q Consensus 409 ~~ir~~V~~l~~~fPiy~~~~~~~~ 433 (433)
..|..-+..++.. .||+.+++|
T Consensus 350 kqi~~pl~rIl~~---~G~~~e~l~ 371 (371)
T cd05536 350 NQVLPAVLRILEA---FGYKEEDLK 371 (371)
T ss_pred HHHHHHHHHHHHH---CCCCHHHCC
T ss_conf 8519999999846---189978749
No 369
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=73.01 E-value=7.9 Score=19.36 Aligned_cols=46 Identities=24% Similarity=0.340 Sum_probs=33.4
Q ss_pred CCHHHHHHHHHHHCCCEEEEECCCCC---CCC------------CHHHHHHHHHHCCCEEEE
Q ss_conf 59899999998604667897055243---536------------379999886417978991
Q gi|254780349|r 160 LDMHEIESLAIEYNPKLIIVGGTAYS---RVW------------DWERFRSIADSIGAYLMA 206 (433)
Q Consensus 160 ID~d~~~~~a~~~kPklIi~G~S~y~---~~~------------d~~~l~eIa~~~ga~l~~ 206 (433)
.|.|.+.+.+++.||.+||--+ +|. ... -...+.++|.++|+++++
T Consensus 37 td~~~v~~~i~~~~PDvVIn~A-Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVh 97 (281)
T COG1091 37 TDPDAVLEVIRETRPDVVINAA-AYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVH 97 (281)
T ss_pred CCHHHHHHHHHHHCCCEEEECC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_conf 6858999999861999899873-203654133898997776779999999999971976999
No 370
>PRK13690 hypothetical protein; Provisional
Probab=71.63 E-value=8.5 Score=19.15 Aligned_cols=92 Identities=25% Similarity=0.450 Sum_probs=53.7
Q ss_pred CCCCCHHHHHHHHHHHHHH-HHHCCCCCEEC--CCHHHHHHHHHHHHHHHCC--------------CCEEEECCCCCCCC
Q ss_conf 3360067999999999999-98718863010--0001679999999983154--------------87488123344841
Q gi|254780349|r 70 YYGGCQYVDDIENIAIERA-KKLFNVNFVNV--QSHSGSQMNQGVFLALMHP--------------GDSFMGLSLDSGGH 132 (433)
Q Consensus 70 yy~G~~~~d~iE~la~~~a-~~lF~a~~anv--qp~SG~~An~av~~ALl~p--------------GD~Il~~~l~~GGH 132 (433)
-++|||++.+. |.+||. .+-++.+-++| +|+-|-....++|.-+-.| |||.++|.+
T Consensus 71 A~QcCEHlNRA--LvvEr~~a~~~~le~V~VvP~~~AGGs~a~~Ay~~~~dPV~VE~I~A~AGiDIGdT~IGMHl----- 143 (183)
T PRK13690 71 AVQGCEHLNRA--LVVEREVAEKYGLEIVTVVPVLHAGGSLATYAYQHMKDPVVVEHITAHAGIDIGDTLIGMHL----- 143 (183)
T ss_pred EEECHHHHHHH--HHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEE-----
T ss_conf 76136776788--99869989983992699972577775899999984799869999730458664554142121-----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 1147665433333220136658323565989999999860466789705524
Q gi|254780349|r 133 LTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAY 184 (433)
Q Consensus 133 lshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y 184 (433)
+.+..|+....-.| -+..-.+.+.|||+|---.-.|
T Consensus 144 --------------k~VaVPvR~s~k~i--G~Ahvt~artRPKlIGG~RA~Y 179 (183)
T PRK13690 144 --------------KHVAVPVRPSVKEI--GEAHVTAARSRPKLIGGARAVY 179 (183)
T ss_pred --------------CCEEEEEEHHHHHH--CCEEEEEECCCCCCCCCCCEEC
T ss_conf --------------32561344115341--5133665403676457763212
No 371
>pfam04260 DUF436 Protein of unknown function (DUF436). Family of bacterial proteins with undetermined function.
Probab=71.47 E-value=8.5 Score=19.13 Aligned_cols=85 Identities=27% Similarity=0.495 Sum_probs=51.2
Q ss_pred CCCCCHHHHHHHHHHHHHH-HHHCCCCCEEC--CCHHHHHHHHHHHHHHHCC--------------CCEEEECCCCCCCC
Q ss_conf 3360067999999999999-98718863010--0001679999999983154--------------87488123344841
Q gi|254780349|r 70 YYGGCQYVDDIENIAIERA-KKLFNVNFVNV--QSHSGSQMNQGVFLALMHP--------------GDSFMGLSLDSGGH 132 (433)
Q Consensus 70 yy~G~~~~d~iE~la~~~a-~~lF~a~~anv--qp~SG~~An~av~~ALl~p--------------GD~Il~~~l~~GGH 132 (433)
-++|||++.+. |.+||. .+-++.+-++| +||-|-....++|.-+-.| |||.++|.+
T Consensus 64 A~Q~CEHlNRA--LvvEr~~a~~~~le~V~VvP~~~AGGs~a~~Ay~~~~dPv~VE~I~A~AGiDIGdT~IGMHl----- 136 (172)
T pfam04260 64 AVQGCEHLNRA--LVVEREVAEAYGLEEVTVVPVLHAGGAMATAAYQQMKDPVEVEHIVAHAGIDIGDTLIGMHL----- 136 (172)
T ss_pred EEECHHHHHHH--HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEEE-----
T ss_conf 98555675678--88629879873980799863777774899999985799869999850468653554144033-----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEE
Q ss_conf 114766543333322013665832356598999999986046678
Q gi|254780349|r 133 LTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLI 177 (433)
Q Consensus 133 lshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklI 177 (433)
+.+..|+....-.|- +..-.+.+.|||+|
T Consensus 137 --------------k~VaVPvR~s~k~iG--~Ahvt~a~tRPKlI 165 (172)
T pfam04260 137 --------------KHVAVPVRLSVKEIG--EAHVTAARSRPKLI 165 (172)
T ss_pred --------------CCEEEEEECCHHHHC--CEEEEEECCCCCCC
T ss_conf --------------336624550252415--03366430377634
No 372
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=71.20 E-value=8.6 Score=19.09 Aligned_cols=50 Identities=22% Similarity=0.317 Sum_probs=31.0
Q ss_pred HHHHHHHHHCCCEEEE--ECCCC---CC-CCCHHHHHHHHHHCCCEEEECCCCHHH
Q ss_conf 9999998604667897--05524---35-363799998864179789918620124
Q gi|254780349|r 164 EIESLAIEYNPKLIIV--GGTAY---SR-VWDWERFRSIADSIGAYLMADISHISG 213 (433)
Q Consensus 164 ~~~~~a~~~kPklIi~--G~S~y---~~-~~d~~~l~eIa~~~ga~l~~D~aH~~G 213 (433)
.++++...-..++++| |.|.| .+ ..|+.-+..+-+..+..+++|.+|..|
T Consensus 153 a~eki~~~Gn~~v~l~ERG~~t~~gy~~~v~D~~~i~~mk~~~~lPVi~D~SHs~G 208 (266)
T PRK13398 153 AAEYIMSEGNENVVLCERGIRTFETYTRNTLDLAAVAVIKELSHLPIIVDPSHATG 208 (266)
T ss_pred HHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCC
T ss_conf 99999847998389984252457774435213677999985779998988853356
No 373
>COG2877 KdsA 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase [Cell envelope biogenesis, outer membrane]
Probab=70.77 E-value=8.7 Score=19.07 Aligned_cols=48 Identities=25% Similarity=0.294 Sum_probs=31.6
Q ss_pred HHHHHHHHCCCEEEEE-CCCCCCCCCHHHHHH--HHHHCCCEEEECCCCHH
Q ss_conf 9999986046678970-552435363799998--86417978991862012
Q gi|254780349|r 165 IESLAIEYNPKLIIVG-GTAYSRVWDWERFRS--IADSIGAYLMADISHIS 212 (433)
Q Consensus 165 ~~~~a~~~kPklIi~G-~S~y~~~~d~~~l~e--Ia~~~ga~l~~D~aH~~ 212 (433)
+++....-+++++.|. +++|...-=+-.+|. |-++.|+.+++|+.|..
T Consensus 151 v~K~~~~gn~~v~lcERG~sFGYnnLV~DMrsl~iM~~~~~PViFDaTHSv 201 (279)
T COG2877 151 VEKFLETGNNKVILCERGASFGYNNLVVDMRSLPIMKEFGAPVIFDATHSV 201 (279)
T ss_pred HHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCE
T ss_conf 999985389867997266756754047776603999870998698242311
No 374
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase; InterPro: IPR005914 Isoprenoids are a large class of compounds, with more than 20,000 structures currently known, which are found in all living organisms. Some play essential physiological roles, such as sterols that stabilise cell membranes or carotenoids involved in photosynthesis, while the function of many others is not well understood. In all eukaryotes and some prokaryotes, isoprenoids are synthesised by the mevalonate pathway, while most prokaryotes use a mevalonate-independent pathway , . This entry represents acetoacetyl-CoA synthase (6.2.1.16 from EC), catalysing the first step of the mevalonate pathway of isoprenoid biosynthesis via isopentenyl diphosphate. ATP + acetoacetate + CoA = AMP + diphosphate + acetoacetyl-CoA A Sinorhizobium protein in this entry is also required for growth on polyhydroxybutyrate, a commonly used carbon storage molecule in bacteria ..
Probab=69.66 E-value=5.9 Score=20.24 Aligned_cols=141 Identities=19% Similarity=0.373 Sum_probs=64.2
Q ss_pred CEECCCHHHHHHHHHHHHHH-HCCCCEEEECCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 30100001679999999983-154874881233448411147--665433333220136658323565989999999860
Q gi|254780349|r 96 FVNVQSHSGSQMNQGVFLAL-MHPGDSFMGLSLDSGGHLTHG--SSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEY 172 (433)
Q Consensus 96 ~anvqp~SG~~An~av~~AL-l~pGD~Il~~~l~~GGHlshg--~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~ 172 (433)
|.+.|-.=..- .+.+-++ +++||+|.++= +.=-|.=-. ...++.+.|--.-| ++.. ++.+ +-..+.
T Consensus 130 w~ELR~~Va~l--aaalRa~Gv~~GDRV~gyl-PN~p~av~amLAtAsvGaiWsScsP-DFG~-~gVL------DRF~Qi 198 (676)
T TIGR01217 130 WEELRRQVARL--AAALRALGVKKGDRVAGYL-PNIPEAVAAMLATASVGAIWSSCSP-DFGA-RGVL------DRFSQI 198 (676)
T ss_pred HHHHHHHHHHH--HHHHHHCCCCCCCEEEECC-CCCHHHHHHHHHHHHCCCEECCCCC-CCCC-CCCC------CCCCCC
T ss_conf 78999999999--9999971789887577737-8828999999985320330005884-2367-6312------522342
Q ss_pred CCCEEE-EECCCCC-CCCCH-HHHHHHHHHCCC---EEE---------ECCC------CHHHHHHHH-CCCC--------
Q ss_conf 466789-7055243-53637-999988641797---899---------1862------012443200-0123--------
Q gi|254780349|r 173 NPKLII-VGGTAYS-RVWDW-ERFRSIADSIGA---YLM---------ADIS------HISGLVVGG-QHPS-------- 222 (433)
Q Consensus 173 kPklIi-~G~S~y~-~~~d~-~~l~eIa~~~ga---~l~---------~D~a------H~~GLIa~g-~~~~-------- 222 (433)
.|||++ |++-.|- +..|. +++++++++-+. .++ .|.| ...-|+|+| -+|.
T Consensus 199 ~Pkl~f~vdgy~YnGKehd~~~kv~~v~k~Lp~L~~vv~iPy~g~~~~~aps~~~g~~~l~df~A~GtG~Qa~~lvfEql 278 (676)
T TIGR01217 199 EPKLLFSVDGYVYNGKEHDRREKVREVAKELPDLRAVVLIPYVGDREKLAPSKVDGALDLEDFLAAGTGAQAAELVFEQL 278 (676)
T ss_pred CCEEEEEEEEEEECCEECCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEC
T ss_conf 66689997307838830175889999985157743168841357700024100787440777763135666887312016
Q ss_pred CCCC-CCEEEECCC----CCCCCCCCEEEE
Q ss_conf 2200-235674045----652256744898
Q gi|254780349|r 223 PVPH-CHIVTTTTH----KSLRGPRGGLIM 247 (433)
Q Consensus 223 Pl~~-ADvvt~sTH----Ktl~GPrgGiI~ 247 (433)
||.| ==|+.+|-. |.+=--+||+++
T Consensus 279 PF~HPL~ilfSSGTTG~PKciV~SaGG~L~ 308 (676)
T TIGR01217 279 PFDHPLYILFSSGTTGVPKCIVHSAGGTLV 308 (676)
T ss_pred CCCCCCEEEECCCCCCCCHHEEECCCCHHH
T ss_conf 799873687247765656013344876588
No 375
>TIGR03275 methan_mark_8 putative methanogenesis marker protein 8. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=69.45 E-value=2.8 Score=22.47 Aligned_cols=87 Identities=21% Similarity=0.180 Sum_probs=52.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEE
Q ss_conf 58323565989999999860466789705524353637999988641797899186201244320001232200235674
Q gi|254780349|r 153 VRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHIVTT 232 (433)
Q Consensus 153 ~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt~ 232 (433)
+|+++-.||--+=-+.|.+.--|=|-+--+ -+-|-+++|++-.+.|.-++.=+-|+.|+ ..--.+.=++|||++|+
T Consensus 142 Ld~~tA~IDq~~Gv~~Aie~Gyk~IaVTV~---~~~~a~~iRele~~~~~~~~if~VHtTGi-s~eea~~~~~~aDivt~ 217 (259)
T TIGR03275 142 LDPDTATIDQIKGVEKAIELGYKKIAVTVA---DAEDAKAIRELESESGIDIIIFAVHTTGI-DREDAEEVVQYADIVTS 217 (259)
T ss_pred ECCCCCCCCHHHHHHHHHHCCCCEEEEEEC---CHHHHHHHHHHCCCCCCCEEEEEEECCCC-CHHHHHHHHHHHHHHHH
T ss_conf 667655134777899999728755899945---88889999975224698489999966899-87899999886147777
Q ss_pred CCCCCCCCCCC
Q ss_conf 04565225674
Q gi|254780349|r 233 TTHKSLRGPRG 243 (433)
Q Consensus 233 sTHKtl~GPrg 243 (433)
+--|.+|.--+
T Consensus 218 CASK~iRe~~~ 228 (259)
T TIGR03275 218 CASKNIREIAK 228 (259)
T ss_pred HCHHHHHHHHC
T ss_conf 04499998736
No 376
>pfam00136 DNA_pol_B DNA polymerase family B. This region of DNA polymerase B appears to consist of more than one structural domain, possibly including elongation, DNA-binding and dNTP binding activities.
Probab=68.79 E-value=9.7 Score=18.74 Aligned_cols=37 Identities=16% Similarity=0.396 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC
Q ss_conf 9999999888999999861685233458889812631
Q gi|254780349|r 291 DYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVD 327 (433)
Q Consensus 291 ~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvd 327 (433)
.+++.++..++.+++.....|+.|+.|-||+=.|-++
T Consensus 188 ~~GR~~i~~~~~~i~~~~~~~~~VIYGDTDSvfv~~~ 224 (458)
T pfam00136 188 AIGREMIEKTKRYVEELLNYGFKVIYGDTDSVFVKFP 224 (458)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECC
T ss_conf 9999999999999997404684699964754788459
No 377
>pfam04864 Alliinase_C Allinase. Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesized from sulfoxide cysteine derivatives by alliinase (EC:4.4.1.4), whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system.
Probab=68.68 E-value=9.7 Score=18.73 Aligned_cols=182 Identities=16% Similarity=0.175 Sum_probs=104.8
Q ss_pred HHHHH-HHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-C--CEEEECCCCCCC--CCCCEEEEECCCCHHHHCCHHHCHH
Q ss_conf 99998-8641797899186201244320001232200-2--356740456522--5674489833620565016646543
Q gi|254780349|r 191 ERFRS-IADSIGAYLMADISHISGLVVGGQHPSPVPH-C--HIVTTTTHKSLR--GPRGGLIMTNHADLAKKINSAIFPG 264 (433)
Q Consensus 191 ~~l~e-Ia~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-A--Dvvt~sTHKtl~--GPrgGiI~~~~~e~~~~i~~avfPg 264 (433)
-.+|+ +-+...+.+++|.|=+= =+-.|+++ | |||-+|.-|... |-|=|-.+.+|+++++|+-+=+--.
T Consensus 151 G~lr~aV~~g~~~k~i~D~aYYW------PhyTpIt~~aD~DIMLFTlSK~TGHAGsRiGWALVKD~~VakkM~~y~~lN 224 (363)
T pfam04864 151 GTLREAVIDGSEAKVIHDLAYYW------PHYTPITYPADEDIMLFTMSKYTGHAGSRFGWALVKDEEVAKKMVEYIELN 224 (363)
T ss_pred CHHHHHHCCCCCCEEEEEEEEEC------CCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHC
T ss_conf 01336650699841887520006------666676777767679898612236762523478863799999999997650
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--------CHHHHHHHHHHHHH-HHHHHHHHHHCC-CCC--CC-CC---------CCCC
Q ss_conf 223445566689999999973--------56489999999988-899999986168-523--34-58---------8898
Q gi|254780349|r 265 LQGGPFMHSIAAKAVAFGEAL--------SSEFRDYAKQIVLN-SQALAKKLQFLG-FDI--VS-GG---------TDNH 322 (433)
Q Consensus 265 ~qg~~~~~~iaa~aval~Ea~--------~~~f~~Ya~qvv~N-A~~La~~L~~~G-~~v--v~-gg---------Td~H 322 (433)
..|-.+-.++.++-+ |+..+ ..++-+|+.+++++ =+.|-+.+...+ |.+ .. ++ .---
T Consensus 225 t~GvS~dSQlRa~ki-Lkvv~~~~~~~~~~~~iF~fg~~~m~~RW~~L~~~v~~S~~FsL~~~~p~yC~ff~~~~~~sPa 303 (363)
T pfam04864 225 TIGVSKESQLRTLKI-LKVVLATCKTESGTMGFFDFGYQTMRERWERLRELVSSSTRFSLQKLPPEYCNYFKKIREPSPA 303 (363)
T ss_pred CCCCCHHHHHHHHHH-HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 530688999999999-9999976326766235789999999999999999971158077267787766542321689986
Q ss_pred EEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 1263166556767999998885671880378998999988898512246667307999899999999999
Q gi|254780349|r 323 LMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIA 392 (433)
Q Consensus 323 ~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~ 392 (433)
-.|+.+...+. .+.+..|.++||+.- ++..+.. .++=+||.-- -..++|.++-+-|.
T Consensus 304 faWlkCe~eed--~DC~~~L~~~~I~~r-~G~~Fga----~~~YVRlSll------~~~d~Fd~lleRL~ 360 (363)
T pfam04864 304 YAWLKCEWEED--TDCYEVLREGKILTR-SGERFGA----DSRYVRLSLI------KTQDDFDQLLQRLK 360 (363)
T ss_pred EEEEEECCCCH--HHHHHHHHHCCEECC-CCCCCCC----CCCEEEEEEE------CCHHHHHHHHHHHH
T ss_conf 37997266320--179999987886456-8764588----9876999840------68878999999998
No 378
>pfam02310 B12-binding B12 binding domain. This domain binds to B12 (adenosylcobamide), it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase.
Probab=68.54 E-value=9.8 Score=18.71 Aligned_cols=52 Identities=12% Similarity=0.115 Sum_probs=28.7
Q ss_pred CCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHC--CCEEEECCCC
Q ss_conf 659899999998604667897055243536379999886417--9789918620
Q gi|254780349|r 159 LLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSI--GAYLMADISH 210 (433)
Q Consensus 159 ~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~--ga~l~~D~aH 210 (433)
.++.+++.+.+++++|++|-+..+........+++.+..++. ++.+++=+.|
T Consensus 37 ~~~~~~i~~~i~~~~pdiVgiS~~~~~~~~~~~~l~~~ik~~~p~~~iv~GG~~ 90 (121)
T pfam02310 37 DVPPEDIVEAIRAENPDVVGLSALMTTNLPAAKELARLLKRIRPGVKVVVGGPH 90 (121)
T ss_pred CCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 799999999999809999999523211211368999999985989759983876
No 379
>cd01976 Nitrogenase_MoFe_alpha Nitrogenase_MoFe_alpha_II: Nitrogenase MoFe protein, beta subunit. A group of proteins similar to the alpha subunit of the MoFe protein of the molybdenum (Mo-) nitrogenase. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Mo-nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=68.49 E-value=9.8 Score=18.70 Aligned_cols=85 Identities=15% Similarity=0.221 Sum_probs=44.6
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCC---------------EEEECCCCCCCCHHHHHHHHHHCC--EEEECCCCCCCCCCCC
Q ss_conf 89999998616852334588898---------------126316655676799999888567--1880378998999988
Q gi|254780349|r 300 SQALAKKLQFLGFDIVSGGTDNH---------------LMLVDLRSKRMTGKRAESILGRVS--ITCNKNSIPFDPESPF 362 (433)
Q Consensus 300 A~~La~~L~~~G~~vv~ggTd~H---------------~vlvdl~~~~~~G~~a~~~Le~~g--I~~Nkn~iP~D~~~~~ 362 (433)
+..+...|.+.|++||.-||+.+ .+++| +.+..+.++.+++.+ |++.- .+.
T Consensus 312 ~~~~i~~~~eLGmevV~~g~~~~~~~Dye~~~~~~~~~~~iid----d~~~~Ele~~i~~~~pDl~l~g------~ke-- 379 (421)
T cd01976 312 PRHYIGAYEDLGMEVVGTGYEFAHRDDYERTEVIPKEGTLLYD----DVTHYELEEFVKRLKPDLIGSG------IKE-- 379 (421)
T ss_pred HHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEE----CCCHHHHHHHHHHCCCCEEEEC------CCC--
T ss_conf 6899999998798899973122747679999850898828972----7999999999985399999954------762--
Q ss_pred CCCCCCCCCHHHH--H---CC--CCHHHHHHHHHHHHHHHH
Q ss_conf 8985122466673--0---79--998999999999999960
Q gi|254780349|r 363 ITSGIRLGTPSGT--T---RG--FKEKDFEYIGELIAQILD 396 (433)
Q Consensus 363 ~~sGiRlGT~aiT--t---rG--~~e~em~~iA~li~~~L~ 396 (433)
..-+.++|.|.+- . .| .+-+.|-.+|+=|+.+|.
T Consensus 380 r~ia~K~gIP~~~~~~~~~~~pyaGy~G~v~far~i~~~i~ 420 (421)
T cd01976 380 KYVFQKMGIPFRQMHSWDYSGPYHGFDGFAIFARDMDMAIN 420 (421)
T ss_pred CHHEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 02004448885766886657776447679999999999852
No 380
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=67.29 E-value=10 Score=18.54 Aligned_cols=68 Identities=26% Similarity=0.277 Sum_probs=49.0
Q ss_pred CHHHHHHHHHHHCCCEEEEECCCCCCCC-CHHHHHHHHHHCCCEEEECCCCHH-HHHHHHCCCCCCCCCCEEEECCC
Q ss_conf 9899999998604667897055243536-379999886417978991862012-44320001232200235674045
Q gi|254780349|r 161 DMHEIESLAIEYNPKLIIVGGTAYSRVW-DWERFRSIADSIGAYLMADISHIS-GLVVGGQHPSPVPHCHIVTTTTH 235 (433)
Q Consensus 161 D~d~~~~~a~~~kPklIi~G~S~y~~~~-d~~~l~eIa~~~ga~l~~D~aH~~-GLIa~g~~~~Pl~~ADvvt~sTH 235 (433)
-++++++++.. --.+|-++.+.-+||. ++++|-.-.+..|.++|+|+|-+- ||-|-.+ -+|+|.+|.+
T Consensus 87 tlkeVd~L~~~-Ga~IIA~DaT~R~RP~~~~~~~i~~~k~~~~l~MAD~St~ee~l~a~~~------G~D~IGTTLs 156 (229)
T COG3010 87 TLKEVDALAEA-GADIIAFDATDRPRPDGDLEELIARIKYPGQLAMADCSTFEEGLNAHKL------GFDIIGTTLS 156 (229)
T ss_pred CHHHHHHHHHC-CCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHC------CCCEEECCCC
T ss_conf 18999999977-9909996255687984359999997335794787325988888889973------9967822420
No 381
>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit; InterPro: IPR006275 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates , . CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate . The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain . CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites . The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein . The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP . There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia . CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains . This entry represents glutamine-dependent CPSase (6.3.5.5 from EC) from prokaryotes and eukaryotes (CPSase II). ; GO: 0004086 carbamoyl-phosphate synthase activity, 0006807 nitrogen compound metabolic process.
Probab=67.01 E-value=10 Score=18.50 Aligned_cols=186 Identities=22% Similarity=0.274 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHC---CCCCEECCCHHHHHHHHHHHHHHHCCC-CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999999999871---886301000016799999999831548-7488123344841114766543333322013665832
Q gi|254780349|r 81 ENIAIERAKKLF---NVNFVNVQSHSGSQMNQGVFLALMHPG-DSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKE 156 (433)
Q Consensus 81 E~la~~~a~~lF---~a~~anvqp~SG~~An~av~~ALl~pG-D~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~ 156 (433)
|.+..|+...+. +.+++-||. +|..++=.+- +|-+-| =+||+-|.+. +|.-
T Consensus 633 Eplt~E~Vm~I~e~E~~~GVIVq~-GGQtp~nlA~-~L~~~GG~~iLGTS~~~-----------------------ID~A 687 (1089)
T TIGR01369 633 EPLTFEDVMNIIELEKPEGVIVQF-GGQTPLNLAK-ELEEAGGVPILGTSPES-----------------------IDRA 687 (1089)
T ss_pred CCCCCCCCEEHEEECCCCEEEEEC-CCHHHHHHHH-HHHHCCCCEEECCCHHH-----------------------HHHH
T ss_conf 763503100110005866799974-8732678999-99970893173688578-----------------------7513
Q ss_pred CCCCCHHHHHHHHHHH---CCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHH-----------------
Q ss_conf 3565989999999860---46678970552435363799998864179789918620124432-----------------
Q gi|254780349|r 157 DGLLDMHEIESLAIEY---NPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVV----------------- 216 (433)
Q Consensus 157 ~~~ID~d~~~~~a~~~---kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa----------------- 216 (433)
. |=+++.+++++. +|+..++ ...++.+++|.++|=-+++==|+++|==|
T Consensus 688 E---DR~kFs~~l~~Lgi~QP~~~~a--------~s~eea~~~A~~iGYPvlvRPSYVLgG~aM~iv~~~eeL~~yl~~a 756 (1089)
T TIGR01369 688 E---DREKFSELLDELGIPQPEWKIA--------TSVEEAKEFASEIGYPVLVRPSYVLGGRAMEIVYNEEELARYLEEA 756 (1089)
T ss_pred C---CHHHHHHHHHHCCCCCCCCCEE--------CCHHHHHHHHHHCCCCEEECCCCCCCCCCHHEECCHHHHHHHHHHH
T ss_conf 1---8679999997158798988527--------2879999998546992898168300336210026788999999999
Q ss_pred -----------HHCCCCCCCC-CCEEEECCCCCCCCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHH--
Q ss_conf -----------0001232200-23567404565225674489833620565016646543223445566689999999--
Q gi|254780349|r 217 -----------GGQHPSPVPH-CHIVTTTTHKSLRGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFG-- 282 (433)
Q Consensus 217 -----------~g~~~~Pl~~-ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~-- 282 (433)
-+.+++-.+. -|.|+ .|+-|+. .-+.+.|.+| |..||= |.+..
T Consensus 757 ~~~S~~~PVlidky~e~A~E~dVD~v~----------Dg~~v~i--~gI~EHiE~A---GVHSGD--------s~~~~Pp 813 (1089)
T TIGR01369 757 VEVSPEHPVLIDKYLEDAVEIDVDAVS----------DGEEVLI--PGIMEHIEEA---GVHSGD--------STCVLPP 813 (1089)
T ss_pred HHHCCCCCEEEEEECCCCEEEEEEEEE----------ECCEEEE--EEHHHHHHHC---CCCCCC--------HHHCCCC
T ss_conf 972089976988852888899998997----------2884899--6231234213---676130--------5311769
Q ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCC-CCEEEECC
Q ss_conf 97356489999999988899999986168-523345888-98126316
Q gi|254780349|r 283 EALSSEFRDYAKQIVLNSQALAKKLQFLG-FDIVSGGTD-NHLMLVDL 328 (433)
Q Consensus 283 Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G-~~vv~ggTd-~H~vlvdl 328 (433)
.-++ .+-.+++.++++.||++|.=.| |||=-=-.| +++-+|-+
T Consensus 814 ~~L~---~~~~~~i~~~~~~iA~~L~v~Gl~NiQf~~~~E~~~yVIE~ 858 (1089)
T TIGR01369 814 QTLS---EDIVKRIKDIVRKIAKELNVKGLFNIQFVVKDEGEVYVIEV 858 (1089)
T ss_pred CCCC---HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEE
T ss_conf 7778---89999999999999987066072224555616996799997
No 382
>cd05532 POLBc_alpha DNA polymerase type-B alpha subfamily catalytic domain. Three DNA-dependent DNA polymerases type B (alpha, delta, and epsilon) have been identified as essential for nuclear DNA replication in eukaryotes. DNA polymerase (Pol) alpha is almost exclusively required for the initiation of DNA replication and the priming of Okazaki fragments during elongation. In most organisms no specific repair role, other than check point control, has been assigned to this enzyme. Pol alpha contains both polymerase and exonuclease domains, but lacks exonuclease activity suggesting that the exonuclease domain may be for structural purposes only.
Probab=66.48 E-value=11 Score=18.44 Aligned_cols=13 Identities=0% Similarity=-0.102 Sum_probs=6.7
Q ss_pred HHHHHHHHHHCCE
Q ss_conf 7999998885671
Q gi|254780349|r 335 GKRAESILGRVSI 347 (433)
Q Consensus 335 G~~a~~~Le~~gI 347 (433)
...++.+|.+-|.
T Consensus 313 Hv~vA~rl~~rg~ 325 (400)
T cd05532 313 HVQVALRMNKRGR 325 (400)
T ss_pred HHHHHHHHHHCCC
T ss_conf 9999999996599
No 383
>pfam10081 DUF2319 Predicted membrane protein (DUF2319). Members of this family of hypothetical bacterial proteins have no known function.
Probab=66.43 E-value=3.5 Score=21.83 Aligned_cols=163 Identities=17% Similarity=0.198 Sum_probs=77.6
Q ss_pred HHCCCCCCCCCCCCHHHHHHHHCCCCCC--CCCCCCCCC------------------------CCCCCHHHHHHHHHHHH
Q ss_conf 8388810430102989999830510288--657988875------------------------33600679999999999
Q gi|254780349|r 33 NDEIQLIASENIVSRAVLEAQGSILTNK--YAEGYPSKR------------------------YYGGCQYVDDIENIAIE 86 (433)
Q Consensus 33 ~~~l~LiASEN~~S~~v~~~l~S~l~nk--yaeG~pg~r------------------------yy~G~~~~d~iE~la~~ 86 (433)
-...|..-......|..-+-.||.-+-- -+.|..|++ -|.|.+-.|.+|+-|.-
T Consensus 185 ~~~~n~~~~pg~~~P~~perSGSp~Slv~W~sLG~qGR~FV~~Gp~~~~I~~~~G~pA~ePIRVYaGl~sa~~~~~rA~l 264 (534)
T pfam10081 185 FAAANALTEPGTAQPTEPERSGSPASLVDWESLGRQGRDFVSGGPTAADIAAFTGRPAVEPIRVYVGLASADTPEARAAL 264 (534)
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHH
T ss_conf 99732557899899998445789743378767361023121479998898876088766763676225668998999999
Q ss_pred HHHHH-----CCCCCEECCCHHHHH-HHHHHHHH--HHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99987-----188630100001679-99999998--31548748812334484111476654333332201366583235
Q gi|254780349|r 87 RAKKL-----FNVNFVNVQSHSGSQ-MNQGVFLA--LMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDG 158 (433)
Q Consensus 87 ~a~~l-----F~a~~anvqp~SG~~-An~av~~A--Ll~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~ 158 (433)
-..|| |.-++.-|.+..|+- -|-....+ .+--||+-+.- .+ +| .-.+. +.|-+|.++.
T Consensus 265 al~EL~RtGafdR~vLvV~tpTGTGWvn~~a~~a~Eyl~~GD~A~va-~Q----YS--ylPS~-------lsfl~d~~~~ 330 (534)
T pfam10081 265 ALRELERTGAFDRKVLVVATPTGTGWVDPAAADALEYLHGGDVATVS-MQ----YS--YLPSW-------LSFLVDREYA 330 (534)
T ss_pred HHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEE-EE----CC--CCCCC-------HHHHCCCCHH
T ss_conf 99999855885631699988998886683442156653079668997-20----14--47640-------7673165409
Q ss_pred ------CCC--HHHHHHHHHHHCCCEEEEECCCCCCC--CCHHHHHHHHHHCCCEEEECCC
Q ss_conf ------659--89999999860466789705524353--6379999886417978991862
Q gi|254780349|r 159 ------LLD--MHEIESLAIEYNPKLIIVGGTAYSRV--WDWERFRSIADSIGAYLMADIS 209 (433)
Q Consensus 159 ------~ID--~d~~~~~a~~~kPklIi~G~S~y~~~--~d~~~l~eIa~~~ga~l~~D~a 209 (433)
.+| ++...++-+..||||.+.|.|.-.+- -.|..+.++.+.+..-|+.---
T Consensus 331 ~~a~raL~~aV~~~~~~lP~~~RPkl~l~GeSLGa~~~~~af~~~~~~~~~~dgalw~G~P 391 (534)
T pfam10081 331 VDAARALFDAVYAHWKTLPPDSRPRLYLHGESLGAFGSQAAFDLLEDLLDPVDGALWSGPP 391 (534)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHCCCHHHHHHHCCEEEEECCC
T ss_conf 9999999999999998489333965899612742122311103577765025736885799
No 384
>TIGR02418 acolac_catab acetolactate synthase, catabolic; InterPro: IPR012782 Acetolactate synthase is a thiamin pyrophosphate-dependent enzyme that combines two molecules of pyruvate to yield 2-acetolactate with the release of CO2. It exists in two distinct forms that have different properties, though they are clearly related , . The biosynthetic form, found in plants, fungi and bacteria, is involved in the biosynthesis of branched-chain amino acids and contains non-catalytic FAD. The catabolic form is found only in some bacteria, participates in butanediol fermentation, and does not contain FAD. This entry represents the catabolic form of acetolactate synthase, generally found in species that posses acetolactate decarboxylase, which is often encoded in the same operon. The enzyme is thought to be a homotetramer, though this has not conclusively been shown. Each monomer consists of three distinct domains, designated, starting from the N-terminus, as alpha, beta and gamma . The core of the alpha and gamma domains is a six-stranded parallel beta sheet surrounded by alpha helices, while the the beta domain forms a double Rossman fold. The thiamin pyrophosphate cofactor has an unusual conformation that has not been seen in other enzymes using this cofactor, including the biosynthetic form of acetolactate synthase. The active site is located in a funnel at the dimer interface, bordered by residues from all three domains.; GO: 0000287 magnesium ion binding, 0003984 acetolactate synthase activity, 0030976 thiamin pyrophosphate binding, 0050660 FAD binding.
Probab=66.24 E-value=5.3 Score=20.58 Aligned_cols=93 Identities=18% Similarity=0.171 Sum_probs=38.7
Q ss_pred ECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 100001679999999983154874881233448411147665433333220136---65832356598999999986046
Q gi|254780349|r 98 NVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPY---NVRKEDGLLDMHEIESLAIEYNP 174 (433)
Q Consensus 98 nvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y---~~d~~~~~ID~d~~~~~a~~~kP 174 (433)
++..+|=..||---.+.--|+|---++++-+= .-++++ +........+ +.+++ -|.+++.+.++.-|=
T Consensus 133 d~~~lsE~vaNAfR~A~~Gk~GAaFvS~PQDV----~~~kp~--s~~~i~~~~~P~~Gaa~~---~~i~~~~~~I~~Ak~ 203 (553)
T TIGR02418 133 DPDALSEVVANAFRLAESGKPGAAFVSLPQDV----VDSKPV--SVKAIPAVAAPKLGAAAD---ADIDEVAEAIKNAKL 203 (553)
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCEEECCCCC----CCCCCC--CHHHHHHHHCCCCCCCHH---HHHHHHHHHHHHCCC
T ss_conf 67654789999999997148966255057321----488755--534521221467888738---899999999983199
Q ss_pred CEEEEECCCCCCCCCHHHHHHHHHHC
Q ss_conf 67897055243536379999886417
Q gi|254780349|r 175 KLIIVGGTAYSRVWDWERFRSIADSI 200 (433)
Q Consensus 175 klIi~G~S~y~~~~d~~~l~eIa~~~ 200 (433)
=++.+|. -=+.+-..+.+|...+++
T Consensus 204 PVlLlG~-~aS~~~~~~Av~rll~k~ 228 (553)
T TIGR02418 204 PVLLLGL-RASSQETTEAVRRLLKKT 228 (553)
T ss_pred CEEEEEC-CCCCHHHHHHHHHHHCCC
T ss_conf 6698504-788889999999986460
No 385
>KOG0926 consensus
Probab=65.84 E-value=1.5 Score=24.38 Aligned_cols=88 Identities=27% Similarity=0.440 Sum_probs=39.3
Q ss_pred CC-CEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCC--CCCCCC-CCE--EEECCCCCCCCCCCEEE
Q ss_conf 46-6789705524353637999988641797899186201244320001--232200-235--67404565225674489
Q gi|254780349|r 173 NP-KLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQH--PSPVPH-CHI--VTTTTHKSLRGPRGGLI 246 (433)
Q Consensus 173 kP-klIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~--~~Pl~~-ADv--vt~sTHKtl~GPrgGiI 246 (433)
+| ||||. |+.+|.-||.+=..+---.--++-+|+-++-=-| .| .-|.+| ++- -|..-||+| |+|||+
T Consensus 413 kpLKLIIM--SATLRVsDFtenk~LFpi~pPlikVdARQfPVsI---HF~krT~~DYi~eAfrKtc~IH~kL--P~G~IL 485 (1172)
T KOG0926 413 KPLKLIIM--SATLRVSDFTENKRLFPIPPPLIKVDARQFPVSI---HFNKRTPDDYIAEAFRKTCKIHKKL--PPGGIL 485 (1172)
T ss_pred CCEEEEEE--EEEEEECCCCCCCEECCCCCCEEEEECCCCCEEE---EECCCCCCHHHHHHHHHHHHHHHCC--CCCCEE
T ss_conf 76169997--4147711024675424789960553045285688---7326798417899999999886108--998279
Q ss_pred E--ECCCCHH---HHCCHHHCHHHHHH
Q ss_conf 8--3362056---50166465432234
Q gi|254780349|r 247 M--TNHADLA---KKINSAIFPGLQGG 268 (433)
Q Consensus 247 ~--~~~~e~~---~~i~~avfPg~qg~ 268 (433)
+ |...|+. +++ +--||-.-++
T Consensus 486 VFvTGQqEV~qL~~kL-RK~~p~~f~~ 511 (1172)
T KOG0926 486 VFVTGQQEVDQLCEKL-RKRFPESFGG 511 (1172)
T ss_pred EEEECHHHHHHHHHHH-HHHCCCCCCC
T ss_conf 9980758999999999-8648410266
No 386
>pfam04131 NanE Putative N-acetylmannosamine-6-phosphate epimerase. This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilisation pathway found mainly in pathogenic bacteria.
Probab=65.56 E-value=11 Score=18.32 Aligned_cols=70 Identities=29% Similarity=0.292 Sum_probs=51.3
Q ss_pred CCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEECCC
Q ss_conf 5989999999860466789705524353637999988641797899186201244320001232200235674045
Q gi|254780349|r 160 LDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHIVTTTTH 235 (433)
Q Consensus 160 ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt~sTH 235 (433)
--++++.+++. -...+|=++.+.-+||..++++-+-.++.+.++|+|+|-+---+.+-. + -+|+|.+|-.
T Consensus 52 Pt~~ev~~l~~-aGadiIA~DaT~R~RP~~~~~lv~~i~~~~~l~MAD~st~eea~~A~~----~-G~D~I~TTL~ 121 (192)
T pfam04131 52 PTMKDIDELAN-AGADIIALDGTDRPRPVDIESFIKRIKEKGQLAMADCSTFEEGLNAHK----L-GVDIVGTTLS 121 (192)
T ss_pred CCHHHHHHHHH-CCCCEEEEECCCCCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHH----C-CCCEEECCCC
T ss_conf 88999999998-599999984678989758999999999819988997499999999998----5-9999982325
No 387
>COG4566 TtrR Response regulator [Signal transduction mechanisms]
Probab=64.63 E-value=12 Score=18.20 Aligned_cols=49 Identities=27% Similarity=0.298 Sum_probs=36.1
Q ss_pred HHHHHHHHHCCCCCCC-----------CCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEE
Q ss_conf 9999998616852334-----------588898126316655676799999888567188
Q gi|254780349|r 301 QALAKKLQFLGFDIVS-----------GGTDNHLMLVDLRSKRMTGKRAESILGRVSITC 349 (433)
Q Consensus 301 ~~La~~L~~~G~~vv~-----------ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~ 349 (433)
++|+.-|...||.+.+ -.-..-.+++|++=.|++|.+..+.|...||..
T Consensus 18 ~al~~Ll~s~G~~v~~~~s~~~fL~~~~~~~pGclllDvrMPg~sGlelq~~L~~~~~~~ 77 (202)
T COG4566 18 DALAFLLESAGFQVKCFASAEEFLAAAPLDRPGCLLLDVRMPGMSGLELQDRLAERGIRL 77 (202)
T ss_pred HHHHHHHHHCCCEEEEECCHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCC
T ss_conf 999999983895366504799998306678897699855788885089999999539998
No 388
>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=64.48 E-value=9.6 Score=18.77 Aligned_cols=49 Identities=10% Similarity=0.153 Sum_probs=27.5
Q ss_pred CCHHHHHHHHHHHCCCEEEEECCCCCCC-CCHHHHHHHHHHCC--CEEEECCCC
Q ss_conf 5989999999860466789705524353-63799998864179--789918620
Q gi|254780349|r 160 LDMHEIESLAIEYNPKLIIVGGTAYSRV-WDWERFRSIADSIG--AYLMADISH 210 (433)
Q Consensus 160 ID~d~~~~~a~~~kPklIi~G~S~y~~~-~d~~~l~eIa~~~g--a~l~~D~aH 210 (433)
.+-+.+++++++.+|.+|.+. .+... ....++.+.+++.+ +.+++=+.|
T Consensus 26 ~~~~~~e~~~~~~~pdvvg~s--~~~~~~~~~~~~~~~~k~~~p~~~iv~GG~h 77 (127)
T cd02068 26 SADDIVEDIKELLKPDVVGIS--LMTSAIYEALELAKIAKEVLPNVIVVVGGPH 77 (127)
T ss_pred CCCCHHHHHHHCCCCCEEEEE--EEHHHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 762039999864996999999--7688999999999999997899789985987
No 389
>PRK05269 transaldolase B; Provisional
Probab=63.95 E-value=12 Score=18.11 Aligned_cols=12 Identities=8% Similarity=0.130 Sum_probs=5.6
Q ss_pred CCEEEECCCCHH
Q ss_conf 978991862012
Q gi|254780349|r 201 GAYLMADISHIS 212 (433)
Q Consensus 201 ga~l~~D~aH~~ 212 (433)
+..|++-.++-.
T Consensus 154 nlTlvFs~~QA~ 165 (320)
T PRK05269 154 NLTLLFSFAQAR 165 (320)
T ss_pred EEEEECCHHHHH
T ss_conf 577762699999
No 390
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=63.85 E-value=12 Score=18.10 Aligned_cols=50 Identities=22% Similarity=0.416 Sum_probs=30.0
Q ss_pred CCCCHHHHHHHHHHHCCCEEEEECC-CCC---------CCCCHHHHHHHHHHCCCEEEECC
Q ss_conf 5659899999998604667897055-243---------53637999988641797899186
Q gi|254780349|r 158 GLLDMHEIESLAIEYNPKLIIVGGT-AYS---------RVWDWERFRSIADSIGAYLMADI 208 (433)
Q Consensus 158 ~~ID~d~~~~~a~~~kPklIi~G~S-~y~---------~~~d~~~l~eIa~~~ga~l~~D~ 208 (433)
|-+.-+++ +-+.+.+|.++|+|+. .|. +..-++-+++|+++-++.|+.|-
T Consensus 187 Gp~~~~~l-~~i~e~~P~v~ii~GPpty~lg~r~~~~~~E~~irNl~~ii~~~~~~lViDH 246 (304)
T COG2248 187 GPINDEAL-EFILEKRPDVLIIGGPPTYLLGYRVGPKSLEKGIRNLERIIEETNATLVIDH 246 (304)
T ss_pred CCCCCHHH-HHHHHCCCCEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 88860888-9998518988996698266766550767799999899999970766499852
No 391
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=63.40 E-value=12 Score=18.05 Aligned_cols=57 Identities=18% Similarity=0.120 Sum_probs=43.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 33333220136658323565989999999860466789705524353637999988641797
Q gi|254780349|r 141 MSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGA 202 (433)
Q Consensus 141 ~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga 202 (433)
+...+|+++.++.| +-.+++.+.+++++|.+|.+..+.......++++.+..++.|.
T Consensus 23 l~~~G~~V~~lG~~-----vp~e~~v~~a~~~~~d~I~lS~~~~~~~~~~~~~i~~l~~~g~ 79 (119)
T cd02067 23 LRDAGFEVIDLGVD-----VPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGL 79 (119)
T ss_pred HHHCCCEEEECCCC-----CCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
T ss_conf 99789989989999-----9999999999970999999962202426899999999997699
No 392
>TIGR00874 talAB transaldolase; InterPro: IPR004730 Transaldolase (2.2.1.2 from EC) catalyzes the reversible transfer of a three-carbon ketol unit from sedoheptulose 7-phosphate to glyceraldehyde 3-phosphate to form erythrose 4-phosphate and fructose 6-phosphate. This enzyme, together with transketolase, provides a link between the glycolytic and pentose-phosphate pathways. Transaldolase is an enzyme of about 34 Kd whose sequence has been well conserved throughout evolution. A lysine has been implicated in the catalytic mechanism of the enzyme; it acts as a nucleophilic group that attacks the carbonyl group of fructose-6-phosphate. Transaldolase is evolutionary related to a bacterial protein of about 20 Kd (known as talC in Escherichia coli), whose exact function is not yet known.; GO: 0004801 transaldolase activity, 0006098 pentose-phosphate shunt, 0005737 cytoplasm.
Probab=62.86 E-value=12 Score=17.98 Aligned_cols=126 Identities=26% Similarity=0.350 Sum_probs=79.5
Q ss_pred HCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEEE--ECCCCHHHHCCHHHCHHHHHHHHHH---H
Q ss_conf 1797899186201244320001232200235674045652256744898--3362056501664654322344556---6
Q gi|254780349|r 199 SIGAYLMADISHISGLVVGGQHPSPVPHCHIVTTTTHKSLRGPRGGLIM--TNHADLAKKINSAIFPGLQGGPFMH---S 273 (433)
Q Consensus 199 ~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt~sTHKtl~GPrgGiI~--~~~~e~~~~i~~avfPg~qg~~~~~---~ 273 (433)
..|..+++|--=+. +|. .-..==.||.=| +|+ ...+.|.+-||.||-+|-.-|-..+ .
T Consensus 8 ~~Gt~vVADtGD~~-~i~---------~~~pqDaTTNPS-------LIL~aA~~p~Y~~lid~Av~~gk~~~~~~~~~~~ 70 (324)
T TIGR00874 8 QFGTVVVADTGDIE-AIK---------KYQPQDATTNPS-------LILAAAQLPKYQELIDEAVAWGKKQGKDDASIKQ 70 (324)
T ss_pred HCCCEEEECCCCHH-HHH---------HCCCCCCCCCHH-------HHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 50977885278789-997---------368998644738-------9998725725799999999999862785137999
Q ss_pred HH-----HHHHHHH-HHHC--H-----------HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCC
Q ss_conf 68-----9999999-9735--6-----------48999999998889999998616852334588898126316655676
Q gi|254780349|r 274 IA-----AKAVAFG-EALS--S-----------EFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMT 334 (433)
Q Consensus 274 ia-----a~aval~-Ea~~--~-----------~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~ 334 (433)
.. =++|.|+ |.+. | .| =.+..|+-|+.|-+.+.+.| -++.=|||.+.+- =.
T Consensus 71 ~~~~a~Dkl~V~fG~eILK~vPGRvStEvDARLSf--d~~A~i~kA~~Li~Ly~~~G-------~~k~RiLiKiAST-We 140 (324)
T TIGR00874 71 QVENALDKLAVNFGLEILKIVPGRVSTEVDARLSF--DTEATIEKARHLIKLYEKAG-------VDKKRILIKIAST-WE 140 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC--CHHHHHHHHHHHHHHHHHCC-------CCCCCEEEECCCC-CH
T ss_conf 99999989999987788611799320110021355--65889999999999999658-------9945057752876-14
Q ss_pred HHHHHHHHH-HCCEEEEC
Q ss_conf 799999888-56718803
Q gi|254780349|r 335 GKRAESILG-RVSITCNK 351 (433)
Q Consensus 335 G~~a~~~Le-~~gI~~Nk 351 (433)
|=+|++.|| +-||-||-
T Consensus 141 GI~AAe~LE~~~GI~CNl 158 (324)
T TIGR00874 141 GIRAAEELEVKEGIHCNL 158 (324)
T ss_pred HHHHHHHHHHHCCCCCCH
T ss_conf 789999988747964022
No 393
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=62.53 E-value=13 Score=17.94 Aligned_cols=77 Identities=26% Similarity=0.362 Sum_probs=44.6
Q ss_pred HHHHHH---HHHHHHHHHHHHHHHHCCCCC--CC-CCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCC
Q ss_conf 489999---999988899999986168523--34-588898126316655676799999888567188037899899998
Q gi|254780349|r 288 EFRDYA---KQIVLNSQALAKKLQFLGFDI--VS-GGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESP 361 (433)
Q Consensus 288 ~f~~Ya---~qvv~NA~~La~~L~~~G~~v--v~-ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~ 361 (433)
....|+ .-++.-+|.||.+|..+|++| |+ |.++|.++ -+......++.+..+.+.+ .+|..
T Consensus 148 ~~~~Y~asKaav~~ltk~lA~ela~~gIrVNaV~PG~i~T~~~-~~~~~~~~~~e~~~~~~~~--------~~Pl~---- 214 (250)
T TIGR03206 148 GEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALL-DDICGGAENPEKLREAFTR--------AIPLG---- 214 (250)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHH-HHHHHCCCCHHHHHHHHHH--------CCCCC----
T ss_conf 8588999999999999999999653291899997688886778-9876443886999999984--------79989----
Q ss_pred CCCCCCCCCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 8898512246667307999899999999999
Q gi|254780349|r 362 FITSGIRLGTPSGTTRGFKEKDFEYIGELIA 392 (433)
Q Consensus 362 ~~~sGiRlGT~aiTtrG~~e~em~~iA~li~ 392 (433)
|+|+| +|+...+-|++
T Consensus 215 ------R~g~p---------ediA~~v~fL~ 230 (250)
T TIGR03206 215 ------RLGQP---------DDLPGAILFFS 230 (250)
T ss_pred ------CCCCH---------HHHHHHHHHHH
T ss_conf ------98399---------99999999995
No 394
>pfam09872 DUF2099 Uncharacterized protein conserved in archaea (DUF2099). This domain, found in various hypothetical prokaryotic proteins, has no known function.
Probab=62.44 E-value=4.8 Score=20.86 Aligned_cols=83 Identities=24% Similarity=0.207 Sum_probs=42.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEE
Q ss_conf 58323565989999999860466789705524353637999988641797899186201244320001232200235674
Q gi|254780349|r 153 VRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHIVTT 232 (433)
Q Consensus 153 ~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt~ 232 (433)
+|+++-.||--+=-+.|.+.--|=|-+--+ -+-|-+++|++- +.+.-++.=+-|+.|+- .--...=++|||++|+
T Consensus 142 Ld~~tA~IDq~~Gv~~Aie~Gyk~IaVTv~---~~~~a~~iRele-~~~~~~~if~VHtTGis-~eea~~~~~~~Divt~ 216 (257)
T pfam09872 142 LDPETAKIDQIEGVKKAIELGYKRIAVTVA---DAEDAKKIRELE-ESGVDILIFGVHTTGIS-REEAERLVKYADIVTA 216 (257)
T ss_pred ECCCCCCCCHHHHHHHHHHCCCCEEEEEEC---CHHHHHHHHHHH-CCCCCEEEEEEECCCCC-HHHHHHHHHHHHHHHH
T ss_conf 566555125777899999728755999945---888899999742-36985899999778998-7899999886147777
Q ss_pred CCCCCCCC
Q ss_conf 04565225
Q gi|254780349|r 233 TTHKSLRG 240 (433)
Q Consensus 233 sTHKtl~G 240 (433)
+--|.+|.
T Consensus 217 CASK~iRe 224 (257)
T pfam09872 217 CASKYIRE 224 (257)
T ss_pred HCHHHHHH
T ss_conf 04699998
No 395
>pfam08844 DUF1815 Domain of unknown function (DUF1815). This presumed domain is about 100 amino acids in length and is functionally uncharacterized.
Probab=62.04 E-value=13 Score=17.88 Aligned_cols=29 Identities=28% Similarity=0.452 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 64899999999888999999861685233
Q gi|254780349|r 287 SEFRDYAKQIVLNSQALAKKLQFLGFDIV 315 (433)
Q Consensus 287 ~~f~~Ya~qvv~NA~~La~~L~~~G~~vv 315 (433)
+.++.+.+..|-|-++||..|+.+||..-
T Consensus 6 eqyr~~V~DLVmsLqALa~~L~~~G~~As 34 (106)
T pfam08844 6 EQYRSVVQDLVMSLQALAIVLEKRGYTAS 34 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_conf 99999999999989999999986880368
No 396
>COG1827 Predicted small molecule binding protein (contains 3H domain) [General function prediction only]
Probab=62.01 E-value=11 Score=18.29 Aligned_cols=149 Identities=14% Similarity=0.006 Sum_probs=78.3
Q ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCH
Q ss_conf 66789705524353637999988641797899186201244320001232200235674045652256744898336205
Q gi|254780349|r 174 PKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHIVTTTTHKSLRGPRGGLIMTNHADL 253 (433)
Q Consensus 174 PklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~e~ 253 (433)
+...+.|... .-++...|+|.-+.||+|....-++.++=- .|+ +.|+... ++-..--+-...-+ ++|+
T Consensus 17 s~~~v~~~~l---ae~~~vsrqIIVqdi~~L~a~~~~Ip~t~~-----gyi-~~~~~~~--~~~~i~~~h~~~~~-~~El 84 (168)
T COG1827 17 SEKPVTGHHL---AEELGVSRQIIVQDIGILRAVGYPIPATPR-----GYI-VRDVNVS--SMRDIARFHEPLEI-EEEL 84 (168)
T ss_pred CCCEEECCCH---HHHHCEEEEEEECCCEEEEECCCCCCCCCC-----CCE-EECCCCC--CHHHHHHHHHHHHC-CHHH
T ss_conf 5731224413---666270568872168599976755788897-----467-7225654--27899998725302-7899
Q ss_pred HHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC---CCCCCCEEEECCCC
Q ss_conf 650166465432234455666899999999735648999999998889999998616852334---58889812631665
Q gi|254780349|r 254 AKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVS---GGTDNHLMLVDLRS 330 (433)
Q Consensus 254 ~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~---ggTd~H~vlvdl~~ 330 (433)
-.-++...- +..+-|-|.|-|--.+..++.+++=++ .+.+.|...|...++ +|+-.|.+=-|
T Consensus 85 ~~~ld~l~~--vsdvvh~H~IyG~i~~~l~v~~~edve----------~fv~~Le~s~~~~l~~ltdg~h~h~l~~~--- 149 (168)
T COG1827 85 LRILDHLYR--VSDVVHSHPIYGEITASLDVKDREDVE----------RFVEKLEESGAKPLSELTDGVHLHTLKAD--- 149 (168)
T ss_pred HHHHHCCCE--EECCEEEEEEECCCCCCCCCCCHHHHH----------HHHHHHHHCCCCEEEECCCCEEEEEEECC---
T ss_conf 999980657--615368722321233330569989999----------99999987389121315786142111233---
Q ss_pred CCCCHHHHHHHHHHCCEEE
Q ss_conf 5676799999888567188
Q gi|254780349|r 331 KRMTGKRAESILGRVSITC 349 (433)
Q Consensus 331 ~~~~G~~a~~~Le~~gI~~ 349 (433)
.+....++++.|++.|+++
T Consensus 150 ~~~~~~~~~~~l~~~g~l~ 168 (168)
T COG1827 150 FEERMEEIEDALEEKGILL 168 (168)
T ss_pred CHHHHHHHHHHHHHCCCCC
T ss_conf 0556999999999648239
No 397
>PRK13235 nifH nitrogenase reductase; Reviewed
Probab=58.74 E-value=15 Score=17.50 Aligned_cols=113 Identities=19% Similarity=0.201 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC
Q ss_conf 167999999998315487488123344841114766543333322-0136658323565989999999860466789705
Q gi|254780349|r 103 SGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFK-AIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGG 181 (433)
Q Consensus 103 SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~-~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~ 181 (433)
|-+.+|+++ ||.+-|-+||.++.+-++.-|-.- +.+..-. +..+ +..+...++++ +++..-. +-+.|=.
T Consensus 15 STtt~NLaA--ALA~~GkkVl~IgcDPk~dsT~~L---~gg~~~~tvld~-l~~~~~~~~le---dvi~~g~-~gi~cve 84 (274)
T PRK13235 15 STTTQNTVA--GLAEMGKKVMVVGCDPKADSTRLL---LGGLQQKTVLDT-LREEGEDVELE---DIIKEGY-GNTRCTE 84 (274)
T ss_pred HHHHHHHHH--HHHHCCCEEEEECCCCCCCHHHHH---HCCCCCCCHHHH-HHHCCCCCCHH---HHEEECC-CCEEEEE
T ss_conf 678999999--999789979998989845366787---389989978999-98628776778---9443178-9818986
Q ss_pred CCCC--------C--CCCHHHHHHH---HHHCC-CEEEECCCCHHHHHHHHCCCCCCCC--CC
Q ss_conf 5243--------5--3637999988---64179-7899186201244320001232200--23
Q gi|254780349|r 182 TAYS--------R--VWDWERFRSI---ADSIG-AYLMADISHISGLVVGGQHPSPVPH--CH 228 (433)
Q Consensus 182 S~y~--------~--~~d~~~l~eI---a~~~g-a~l~~D~aH~~GLIa~g~~~~Pl~~--AD 228 (433)
|.-| | ..-++.+.++ .++.. -++++|. +|.+..|-|..|+.. ||
T Consensus 85 aggp~pg~gcagrgii~~~~~L~~l~~~~~~~~~DyVl~Dv---LGdvvcggFa~pir~~~A~ 144 (274)
T PRK13235 85 SGGPEPGVGCAGRGIITSVNLLEQLGAYDDEWNLDYVFYDV---LGDVVCGGFAMPIRDGKAE 144 (274)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEC---CCCCCCCCCCCCCCCCCCC
T ss_conf 89987566757631525899998817754335776899813---7853124511551006587
No 398
>PRK09390 fixJ response regulator FixJ; Provisional
Probab=56.69 E-value=16 Score=17.27 Aligned_cols=36 Identities=6% Similarity=-0.044 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHH
Q ss_conf 8999999986046678970552435363799998864
Q gi|254780349|r 162 MHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIAD 198 (433)
Q Consensus 162 ~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~ 198 (433)
-++..+.++..+|.+|+++-+. |-.--++-+++|..
T Consensus 36 ~~~~l~~~~~~~pdlvllDi~m-P~~~G~e~l~~l~~ 71 (202)
T PRK09390 36 AQAFLDALPGLRFGCVVTDVRM-PGIDGIELLRRLKA 71 (202)
T ss_pred HHHHHHHHHCCCCCEEEECCCC-CCCCCHHHHHHHHH
T ss_conf 9999999765797999877999-99896079999872
No 399
>PRK12394 putative metallo-dependent hydrolase; Provisional
Probab=56.08 E-value=16 Score=17.21 Aligned_cols=74 Identities=14% Similarity=0.086 Sum_probs=42.8
Q ss_pred CCCHHHHHHHHHHHCCCEEEEE-----CCCCCC--CCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEE
Q ss_conf 6598999999986046678970-----552435--363799998864179789918620124432000123220023567
Q gi|254780349|r 159 LLDMHEIESLAIEYNPKLIIVG-----GTAYSR--VWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHIVT 231 (433)
Q Consensus 159 ~ID~d~~~~~a~~~kPklIi~G-----~S~y~~--~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt 231 (433)
.+|.+...+.++++ |.+|+-. .+.... .-++++-+++|++.+..+|+.++|.-=- .--+. +=++.-||+|
T Consensus 137 ~id~~~~~~~~~~~-~d~ivGiK~r~~~~~v~~~g~~pl~~a~e~a~~~~lplmvH~~~~~~~-~~ei~-~~lr~GDI~t 213 (387)
T PRK12394 137 NIDENKIHALFRQY-RNVLQGLKLKVQTEDIAEYGLKPLTESLRIANDLRCPVAIHSTHPVVP-MKELV-SLLRRGDIIA 213 (387)
T ss_pred HCCHHHHHHHHHHC-HHHEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCC-HHHHH-HHHCCCCEEE
T ss_conf 57899999999867-242355699987155343570699999999865598189978899989-99999-8745698898
Q ss_pred ECCC
Q ss_conf 4045
Q gi|254780349|r 232 TTTH 235 (433)
Q Consensus 232 ~sTH 235 (433)
...|
T Consensus 214 H~f~ 217 (387)
T PRK12394 214 HAFH 217 (387)
T ss_pred EECC
T ss_conf 6215
No 400
>cd05537 POLBc_Pol_II DNA polymerase type-II subfamily catalytic domain. Bacteria contain five DNA polymerases (I, II, III, IV and V). DNA polymerase II (Pol II) is a prototype for the B-family of polymerases. The role of Pol II in a variety of cellular activities, such as repair of DNA damaged by UV irradiation or oxidation has been proven by genetic studies. DNA polymerase III is the main enzyme responsible for replication of the bacterial chromosome; however, In vivo studies have also shown that Pol II is able to participate in chromosomal DNA replication with larger role in lagging-strand replication.
Probab=55.76 E-value=16 Score=17.17 Aligned_cols=35 Identities=17% Similarity=0.403 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC
Q ss_conf 99999999888999999861685233458889812631
Q gi|254780349|r 290 RDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVD 327 (433)
Q Consensus 290 ~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvd 327 (433)
..++++++..++.+++. .|++|+.|-||+=.|..+
T Consensus 124 t~~gr~~i~~~~~~~e~---~g~~VIYGDTDSifv~~~ 158 (371)
T cd05537 124 TLRGHEIMKQTRAWIEQ---QGYQVIYGDTDSTFVWLG 158 (371)
T ss_pred HHHHHHHHHHHHHHHHH---CCCEEEEECCCEEEEECC
T ss_conf 88889999999999996---798689972651688638
No 401
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=55.61 E-value=16 Score=17.15 Aligned_cols=49 Identities=16% Similarity=0.287 Sum_probs=32.9
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEE
Q ss_conf 36658323565989999999860466789705524353637999988641797899
Q gi|254780349|r 150 PYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLM 205 (433)
Q Consensus 150 ~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~ 205 (433)
.|..+.+-|.+...++-...+++.-|-+|.|+|-- +..++.++| ||=++
T Consensus 198 ~y~~~~DPGV~sV~~Iy~YYK~~GykT~VMgASFR----N~~EI~aLA---GCD~L 246 (391)
T PRK12309 198 SYPGAEDPGVQSVTQIYNYYKKFGYKTEVMGASFR----NIGEIIELA---GCDLL 246 (391)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCC----CHHHHHHHH---CCCCC
T ss_conf 77877795389999999999975987277110016----789999871---78623
No 402
>TIGR01364 serC_1 phosphoserine aminotransferase; InterPro: IPR003248 Phosphoserine aminotransferases (2.6.1.52 from EC) catalyse the conversion of O-phospho-L-serine and oxoglutarate to 3-phosphonooxypyruvate and L-glutamate in the major phosphorylated serine biosynthesis pathway. In bacteria it is also equired for the biosynthesis of pyridoxine. The enzyme requires pyridoxal phosphate as a cofactor, and is part of the aminotransferase class-V family.; GO: 0006564 L-serine biosynthetic process.
Probab=55.45 E-value=7.5 Score=19.52 Aligned_cols=317 Identities=15% Similarity=0.185 Sum_probs=157.0
Q ss_pred CCCHHHHHHHHCCCCCCCCCCCCC----CCCCCCCHHHHHHHHHHHHHHHHHCCCC--CEECCCHH-HHHHHHHHHHHHH
Q ss_conf 029899998305102886579888----7533600679999999999999871886--30100001-6799999999831
Q gi|254780349|r 44 IVSRAVLEAQGSILTNKYAEGYPS----KRYYGGCQYVDDIENIAIERAKKLFNVN--FVNVQSHS-GSQMNQGVFLALM 116 (433)
Q Consensus 44 ~~S~~v~~~l~S~l~nkyaeG~pg----~ryy~G~~~~d~iE~la~~~a~~lF~a~--~anvqp~S-G~~An~av~~ALl 116 (433)
.++..|++--.++|-|==.-|..= .| .+-..+|=.-|.+..++|.+-. |--.=.-. ||.=--+|-+=|+
T Consensus 10 ~LP~~VL~~aq~Ellnf~~~G~SVmEiSHR----sk~F~~v~~~Ae~dlR~LL~iPd~Y~vLFLQGGAt~QFa~~PlNL~ 85 (391)
T TIGR01364 10 ALPEEVLEQAQKELLNFNGLGMSVMEISHR----SKEFEAVASEAESDLRELLNIPDNYEVLFLQGGATTQFAAVPLNLL 85 (391)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEECC----CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 278889999999986575179766998538----6899999999999999882479982689873872468999999889
Q ss_pred C--CCC--EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCC-CCCCHHHHHHHHHH-HC---C--CEEEEEC
Q ss_conf 5--487--48812334484111476654333332201366----58323-56598999999986-04---6--6789705
Q gi|254780349|r 117 H--PGD--SFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYN----VRKED-GLLDMHEIESLAIE-YN---P--KLIIVGG 181 (433)
Q Consensus 117 ~--pGD--~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~----~d~~~-~~ID~d~~~~~a~~-~k---P--klIi~G~ 181 (433)
. +++ |++.-+---=||-|--+.-.+ +.|-. +|+ +.... ..=+|..+-+.-.- .. | ..|....
T Consensus 86 ~~~~~~~GK~~~A~Y~~TG~WS~kA~~EA--~~~~~-~~G~~v~~~~~~~~~~~y~~iP~~~~w~~~~~G~~~~Yvh~c~ 162 (391)
T TIGR01364 86 AAKEGKNGKILVADYIVTGAWSKKALKEA--KKLGN-PLGVEVNVVASGEEEGNYTKIPDQSEWEISEDGEDAAYVHYCA 162 (391)
T ss_pred HHCCCCCCCEEEEEEEECCHHHHHHHHHH--HHHCC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
T ss_conf 75369998578850022175889999998--86043-0465677614200057864277702123277878746657257
Q ss_pred CCCCCCCCHHHHH-HHHHHCC----CEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCCCCCCC-EEEEECCCCH
Q ss_conf 5243536379999-8864179----7899186201244320001232200--23567404565225674-4898336205
Q gi|254780349|r 182 TAYSRVWDWERFR-SIADSIG----AYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSLRGPRG-GLIMTNHADL 253 (433)
Q Consensus 182 S~y~~~~d~~~l~-eIa~~~g----a~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl~GPrg-GiI~~~~~e~ 253 (433)
=.. +.=-+|+ +.-+.-. +.|++|+| ...+-.|++- -|++.+--.|-+ ||-| -+|+-|+ |+
T Consensus 163 NET---i~Gvef~P~~P~~~~~~Pn~~LVaDmS-------S~ilSR~~Dvs~fglIYAGAQKN~-GpaG~TvVIvR~-DL 230 (391)
T TIGR01364 163 NET---IHGVEFRPELPEVKNKDPNAPLVADMS-------SNILSRPIDVSKFGLIYAGAQKNI-GPAGLTVVIVRK-DL 230 (391)
T ss_pred CCC---CCCEEECCCCCCCCCCCCCEEEEECCC-------HHHCCCCCCCCCCCEEEEEHHHCC-CCCEEEEEEECC-HH
T ss_conf 871---102166476886788897526885154-------323157678511355750032120-532268999811-44
Q ss_pred HHHCCHH--------HCHHHHH-------H-----HHHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHC-C
Q ss_conf 6501664--------6543223-------4-----455666899999999735648-999999998889999998616-8
Q gi|254780349|r 254 AKKINSA--------IFPGLQG-------G-----PFMHSIAAKAVAFGEALSSEF-RDYAKQIVLNSQALAKKLQFL-G 311 (433)
Q Consensus 254 ~~~i~~a--------vfPg~qg-------~-----~~~~~iaa~aval~Ea~~~~f-~~Ya~qvv~NA~~La~~L~~~-G 311 (433)
-++...+ +.|-+.. + |-.-.|--....|+-.+...| ++-.+.=.+=|+.|-+.+.+. |
T Consensus 231 Lgr~~~~~LH~L~vP~~P~~~~Y~~~~~~~SmYNTPPtF~iY~~~LVf~Wlk~~GGv~~~e~~N~~KA~LLY~~ID~S~g 310 (391)
T TIGR01364 231 LGRASDAELHKLGVPITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDAIDNSNG 310 (391)
T ss_pred HCCCCCCCHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 15676230201666597841321898863887334025899987889999986062899999989999999999864898
Q ss_pred CCCC--CCCCCCCEEE-ECCCCC----CCCHHHHHHHHHHCCE-EEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHH
Q ss_conf 5233--4588898126-316655----6767999998885671-880378998999988898512246667307999899
Q gi|254780349|r 312 FDIV--SGGTDNHLML-VDLRSK----RMTGKRAESILGRVSI-TCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKD 383 (433)
Q Consensus 312 ~~vv--~ggTd~H~vl-vdl~~~----~~~G~~a~~~Le~~gI-~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~e 383 (433)
|=.. .---.|-|=+ -.+.+. .++-+=+.++-++ |. .++ -.|+- .|+|=.--- .|.-+.
T Consensus 311 FY~~~v~k~~RS~MNV~F~~~~~~G~~eLe~~Fl~eA~~~-gl~~LK------GHRsV---GG~RASiYN----A~ple~ 376 (391)
T TIGR01364 311 FYRNPVDKRARSLMNVVFTLPNEKGDEELEKEFLKEAEER-GLVGLK------GHRSV---GGMRASIYN----ALPLEG 376 (391)
T ss_pred CCCCCCCHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHC-CCHHCC------CCCEE---CCEEEEHHC----CCCHHH
T ss_conf 0116437542674642213788778555548999999970-500127------63033---125210111----768899
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780349|r 384 FEYIGELIAQ 393 (433)
Q Consensus 384 m~~iA~li~~ 393 (433)
++.+++||.+
T Consensus 377 Vq~Lv~FM~~ 386 (391)
T TIGR01364 377 VQALVDFMKE 386 (391)
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
No 403
>PRK05339 hypothetical protein; Provisional
Probab=55.05 E-value=17 Score=17.09 Aligned_cols=38 Identities=21% Similarity=0.280 Sum_probs=15.0
Q ss_pred CCCCEEEECCCCCCCCHHHHHHHHHHCCE-EEECCCCCCCC
Q ss_conf 88981263166556767999998885671-88037899899
Q gi|254780349|r 319 TDNHLMLVDLRSKRMTGKRAESILGRVSI-TCNKNSIPFDP 358 (433)
Q Consensus 319 Td~H~vlvdl~~~~~~G~~a~~~Le~~gI-~~Nkn~iP~D~ 358 (433)
.+--.|||-+...+=|.- .--|..-|+ ..|.-.+|..+
T Consensus 147 ~~ADiiLvGVSRtsKTPt--S~YLA~~G~KvAN~PLvpe~~ 185 (273)
T PRK05339 147 DEADVILVGVSRTSKTPT--SLYLANKGIKAANYPLVPEVP 185 (273)
T ss_pred HHCCEEEEECCCCCCCCH--HHHHHHCCCCEEEECCCCCCC
T ss_conf 358899982255789837--899985585224107779999
No 404
>COG4962 CpaF Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion]
Probab=54.40 E-value=17 Score=17.02 Aligned_cols=70 Identities=16% Similarity=0.145 Sum_probs=30.9
Q ss_pred CCCCCCCCCCCCCC--CCCCCCHHHHH--HHHHHHCCCEEEEECCCCCCCCCHHHHH-HHHHHCCCEEEECCCCH
Q ss_conf 33332201366583--23565989999--9998604667897055243536379999-88641797899186201
Q gi|254780349|r 142 SGKWFKAIPYNVRK--EDGLLDMHEIE--SLAIEYNPKLIIVGGTAYSRVWDWERFR-SIADSIGAYLMADISHI 211 (433)
Q Consensus 142 ~g~~~~~~~y~~d~--~~~~ID~d~~~--~~a~~~kPklIi~G~S~y~~~~d~~~l~-eIa~~~ga~l~~D~aH~ 211 (433)
+-+.|...++.++. ..+.++.+... ..+-..+-.++++|+..-....=.-.+. .|.-.--.+.+.|.+-.
T Consensus 138 sIRKf~k~~ltl~dli~~gt~~~~~a~~L~~av~~r~NILisGGTGSGKTTlLNal~~~i~~~eRvItiEDtaEL 212 (355)
T COG4962 138 SIRKFPKIKLTLLDLIIFGTMIRRAAKFLRRAVGIRCNILISGGTGSGKTTLLNALSGFIDSDERVITIEDTAEL 212 (355)
T ss_pred CCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEHHHH
T ss_conf 441256552559999873895889999999998620159996787887999999997157976508998123664
No 405
>pfam03618 DUF299 Domain of unknown function (DUF299). Family of bacterial proteins with no known function.
Probab=54.32 E-value=13 Score=17.81 Aligned_cols=43 Identities=21% Similarity=0.245 Sum_probs=24.7
Q ss_pred CCCCCCEEEECCCCCCCCHHHHHHHHHHCCE-EEECCCCCCCCCCC
Q ss_conf 5888981263166556767999998885671-88037899899998
Q gi|254780349|r 317 GGTDNHLMLVDLRSKRMTGKRAESILGRVSI-TCNKNSIPFDPESP 361 (433)
Q Consensus 317 ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI-~~Nkn~iP~D~~~~ 361 (433)
|..+-..|||-+...+=|.- .--|..-|+ ..|.-.+|..+-|+
T Consensus 134 ~l~~ADiiLvGVSRtsKTP~--S~YLA~~G~KvAN~PLvp~~~lP~ 177 (255)
T pfam03618 134 GLDEADIILVGVSRTSKTPT--SLYLANKGIKVANYPLVPEVPLPE 177 (255)
T ss_pred CHHHCCEEEEECCCCCCCCH--HHHHHHCCCCEEEECCCCCCCCCH
T ss_conf 46358899982255789837--899985585224116779999998
No 406
>COG0853 PanD Aspartate 1-decarboxylase [Coenzyme metabolism]
Probab=54.25 E-value=6.4 Score=20.01 Aligned_cols=18 Identities=22% Similarity=0.276 Sum_probs=13.3
Q ss_pred HHHHHHCCCEEEEECCCC
Q ss_conf 999860466789705524
Q gi|254780349|r 167 SLAIEYNPKLIIVGGTAY 184 (433)
Q Consensus 167 ~~a~~~kPklIi~G~S~y 184 (433)
+-++.++||+++++...-
T Consensus 95 ~e~~~~~Pkvv~~d~~N~ 112 (126)
T COG0853 95 EEAKTHKPKVVVVDEKNE 112 (126)
T ss_pred HHHHCCCCEEEEECCCCC
T ss_conf 797336973999889872
No 407
>COG3414 SgaB Phosphotransferase system, galactitol-specific IIB component [Carbohydrate transport and metabolism]
Probab=53.88 E-value=17 Score=16.97 Aligned_cols=69 Identities=16% Similarity=0.229 Sum_probs=38.5
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEECCC--CCC-CCCCCEEEEECC
Q ss_conf 789705524353637999988641797899186201244320001232200235674045--652-256744898336
Q gi|254780349|r 176 LIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHIVTTTTH--KSL-RGPRGGLIMTNH 250 (433)
Q Consensus 176 lIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt~sTH--Ktl-~GPrgGiI~~~~ 250 (433)
|..||.-.-+-..==.++.+++++.|.- +|.+|.. -+..+.=.+.+|++.+|+| .+| ..|-|=++.+++
T Consensus 5 L~aCG~GvgSS~~ik~kve~~l~~~gi~--~~~~~~~----v~~~~~~~~~aDiiv~s~~l~~~~~~~~~~~v~~~~~ 76 (93)
T COG3414 5 LAACGNGVGSSTMIKMKVEEVLKELGID--VDVEQCA----VDEIKALTDGADIIVTSTKLADEFEDIPKGYVVITGN 76 (93)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHCCCC--CEEEEEE----ECCCCCCCCCCCEEEEEHHHHHHCCCCCCCEEEEECC
T ss_conf 9987898028999999999999985998--4266677----1111457875529997467565507688751899746
No 408
>pfam02492 cobW CobW/HypB/UreG, nucleotide-binding domain. This domain is found in HypB, a hydrogenase expression / formation protein, and UreG a urease accessory protein. Both these proteins contain a P-loop nucleotide binding motif. HypB has GTPase activity and is a guanine nucleotide binding protein. It is not known whether UreG binds GTP or some other nucleotide. Both enzymes are involved in nickel binding. HypB can store nickel and is required for nickel dependent hydrogenase expression. UreG is required for functional incorporation of the urease nickel metallocenter. GTP hydrolysis may required by these proteins for nickel incorporation into other nickel proteins. This family of domains also contains P47K, a Pseudomonas chlororaphis protein needed for nitrile hydratase expression, and the cobW gene product, which may be involved in cobalamin biosynthesis in Pseudomonas denitrificans.
Probab=53.01 E-value=18 Score=16.88 Aligned_cols=69 Identities=13% Similarity=0.136 Sum_probs=38.6
Q ss_pred HHHHHH--HHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHH-HHHHHCCCCCCCCCCEEEEC
Q ss_conf 999998--6046678970552435363799998864179789918620124-43200012322002356740
Q gi|254780349|r 165 IESLAI--EYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISG-LVVGGQHPSPVPHCHIVTTT 233 (433)
Q Consensus 165 ~~~~a~--~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~G-LIa~g~~~~Pl~~ADvvt~s 233 (433)
++++.. ..+|..|++..|-...|.++.++..-..-.+.+.++|+.++.- .-....++.-+.+||++--+
T Consensus 74 l~~l~~~~~~~~d~iiIE~sGla~p~~i~~~~~~~~~~~~i~vvDa~~~~~~~~~~~~~~~Qi~~AD~vvlN 145 (174)
T pfam02492 74 LEALLELKLPRLDLLFIETTGLACPAPVLDLRSDLGLDGVVTVVDVKNFTEGEDIPEKAPDQIAFADLIVIN 145 (174)
T ss_pred HHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEECHHHHHCCCCHHHHHHHHHHCCEEEEE
T ss_conf 999985578999999995876677077776532026545999997234330020078999999876999984
No 409
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=52.65 E-value=18 Score=16.84 Aligned_cols=13 Identities=31% Similarity=0.542 Sum_probs=6.6
Q ss_pred CHHHHHHHHHHCC
Q ss_conf 3799998864179
Q gi|254780349|r 189 DWERFRSIADSIG 201 (433)
Q Consensus 189 d~~~l~eIa~~~g 201 (433)
.+++-.++|++.|
T Consensus 211 T~erA~~La~~~~ 223 (414)
T COG0373 211 TLERAEELAKKLG 223 (414)
T ss_pred CHHHHHHHHHHHC
T ss_conf 7899999999838
No 410
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=52.58 E-value=18 Score=16.83 Aligned_cols=65 Identities=12% Similarity=0.138 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHCC---CEEEEE-----CCCCCCCC----CHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCE
Q ss_conf 8999999986046---678970-----55243536----37999988641797899186201244320001232200235
Q gi|254780349|r 162 MHEIESLAIEYNP---KLIIVG-----GTAYSRVW----DWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHI 229 (433)
Q Consensus 162 ~d~~~~~a~~~kP---klIi~G-----~S~y~~~~----d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADv 229 (433)
.+++.+.|+..|- +++-.| .|-|+|-- -++.++++.++.|-.++-|....--+=+ =.+|+|+
T Consensus 114 ~eq~~~~A~~vk~~Ga~~lRgGa~KPRTsPysFqGlGeeGL~~L~~ak~e~GLpvvTEV~~~~~ve~------v~~~~Di 187 (352)
T PRK13396 114 EEMIVETAKRVKAAGAKFLRGGAYKPRTSPYAFQGHGESALELLAAAREATGLGIITEVMDAADLDK------IAEVADV 187 (352)
T ss_pred HHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHH------HHHHCCE
T ss_conf 9999999999998399878265024789985435870879999999999869972688679999999------9865888
Q ss_pred EEE
Q ss_conf 674
Q gi|254780349|r 230 VTT 232 (433)
Q Consensus 230 vt~ 232 (433)
+--
T Consensus 188 lQI 190 (352)
T PRK13396 188 IQV 190 (352)
T ss_pred EEE
T ss_conf 998
No 411
>cd05534 POLBc_zeta DNA polymerase type-B zeta subfamily catalytic domain. DNA polymerase (Pol) zeta is a member of the eukaryotic B-family of DNA polymerases and distantly related to DNA Pol delta. Pol zeta plays a major role in translesion replication and the production of either spontaneous or induced mutations. Apart from its role in translesion replication, Pol zeta also appears to be involved in somatic hypermutability in B lymphocytes, an important element for the production of high affinity antibodies in response to an antigen.
Probab=52.33 E-value=18 Score=16.80 Aligned_cols=36 Identities=19% Similarity=0.288 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC
Q ss_conf 999999888999999861685233458889812631
Q gi|254780349|r 292 YAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVD 327 (433)
Q Consensus 292 Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvd 327 (433)
.+++++..++.+.+.....|+.|+.|-||+=.|...
T Consensus 200 ~GR~~i~~~~~~ie~~~~~g~~VIYGDTDSifv~~~ 235 (451)
T cd05534 200 TGRETLERAIELIESTPKWGAKVVYGDTDSLFVLLP 235 (451)
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECC
T ss_conf 879999999999984135783599853764377448
No 412
>pfam09537 DUF2383 Domain of unknown function (DUF2383). Members of this protein family are found mostly in the Proteobacteria, although one member is found in the the marine planctomycete Pirellula sp. strain 1. The function is unknown.
Probab=52.16 E-value=5 Score=20.74 Aligned_cols=59 Identities=27% Similarity=0.396 Sum_probs=42.6
Q ss_pred HCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---CCCEEEECCCCCCCCHHHHHHHHHH
Q ss_conf 35648999999998889999998616852334588---8981263166556767999998885
Q gi|254780349|r 285 LSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGT---DNHLMLVDLRSKRMTGKRAESILGR 344 (433)
Q Consensus 285 ~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggT---d~H~vlvdl~~~~~~G~~a~~~Le~ 344 (433)
+.+.|..++.+--..+..|...+...|-..-.+|| .=|..|+|+++. +++...+..|+.
T Consensus 32 lk~~f~~~~~~r~~~~~eL~~~i~~~Gg~p~~~gs~~g~lhr~w~~lks~-~~~~d~~~il~~ 93 (111)
T pfam09537 32 LKALFQRRAAERRQAAAELQAEIRALGGEPEDGGSFAGTLHRAWMDLKSA-LTGDDDEAVLEE 93 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH-HCCCCHHHHHHH
T ss_conf 99999999999999999999999996899888985677999999999999-828978999999
No 413
>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=52.06 E-value=19 Score=16.77 Aligned_cols=84 Identities=19% Similarity=0.235 Sum_probs=46.2
Q ss_pred HHHHHCCCCCCC----CCCCCCEEEECC---CCCCCCHHHHHHHHHHCC-EEEE-CCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 998616852334----588898126316---655676799999888567-1880-3789989999888985122466673
Q gi|254780349|r 305 KKLQFLGFDIVS----GGTDNHLMLVDL---RSKRMTGKRAESILGRVS-ITCN-KNSIPFDPESPFITSGIRLGTPSGT 375 (433)
Q Consensus 305 ~~L~~~G~~vv~----ggTd~H~vlvdl---~~~~~~G~~a~~~Le~~g-I~~N-kn~iP~D~~~~~~~sGiRlGT~aiT 375 (433)
+...+.||+-|- .|-=-||+|-.. |.....|. .+.++.-.- |+-- |+.++-| .+-|+||.-.+..
T Consensus 148 ~~A~~AGfDgVEIh~ahGyLl~qFlSp~~N~RtD~YGGs-~eNR~Rf~~eii~air~~vg~d-----f~vgvRls~~d~~ 221 (327)
T cd02803 148 RRAKEAGFDGVEIHGAHGYLLSQFLSPYTNKRTDEYGGS-LENRARFLLEIVAAVREAVGPD-----FPVGVRLSADDFV 221 (327)
T ss_pred HHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHCCCC-----CCEEEEECHHHCC
T ss_conf 999984999899835766188872175469877778889-8999899999999999973988-----7617997702126
Q ss_pred HCCCCHHHHHHHHHHHHHH
Q ss_conf 0799989999999999999
Q gi|254780349|r 376 TRGFKEKDFEYIGELIAQI 394 (433)
Q Consensus 376 trG~~e~em~~iA~li~~~ 394 (433)
.-|...+|+.+++..+.+.
T Consensus 222 ~~g~~~~e~~~~~~~l~~~ 240 (327)
T cd02803 222 PGGLTLEEAIEIAKALEEA 240 (327)
T ss_pred CCCCCHHHHHHHHHHHHHC
T ss_conf 8999989999999999855
No 414
>pfam02261 Asp_decarbox Aspartate decarboxylase. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalysed by the enzyme aspartate decarboxylase EC:4.1.1.11 which requires a pyruvoyl group for its activity. It is synthesized initially as a proenzyme which is then proteolytically cleaved to an alpha (C-terminal) and beta (N-terminal) subunit and a pyruvoyl group. This family contains both chains of aspartate decarboxylase.
Probab=51.86 E-value=5.5 Score=20.44 Aligned_cols=20 Identities=5% Similarity=0.086 Sum_probs=14.2
Q ss_pred HHCCCCEEEECCCCCCCCCC
Q ss_conf 31548748812334484111
Q gi|254780349|r 115 LMHPGDSFMGLSLDSGGHLT 134 (433)
Q Consensus 115 Ll~pGD~Il~~~l~~GGHls 134 (433)
=+.|+++|...++..|-.++
T Consensus 37 gi~~~E~V~V~Nv~NG~R~~ 56 (116)
T pfam02261 37 GILEYEKVQIVNVNNGERFE 56 (116)
T ss_pred CCCCCCEEEEEECCCCCEEE
T ss_conf 99989889999898996899
No 415
>CHL00072 chlL photochlorophyllide reductase subunit L
Probab=51.67 E-value=19 Score=16.73 Aligned_cols=114 Identities=16% Similarity=0.133 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC
Q ss_conf 1679999999983154874881233448411147665433333-220136658323565989999999860466789705
Q gi|254780349|r 103 SGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKW-FKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGG 181 (433)
Q Consensus 103 SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~-~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~ 181 (433)
|-+.||+++-+|. -|-+||-..-+ -.|-+..++.|+. +..+.+ +...+...+--.+++++.+.... |.|=.
T Consensus 14 STtsaNlsaaLA~--~GkkVl~IGcD----pk~DsT~~L~g~~~~tvld~-l~~~~~~~~~~~~edvi~~G~~g-i~cvE 85 (271)
T CHL00072 14 STTSCNISIALAR--RGKKVLQIGCD----PKHDSTFTLTGFLIPTIIDT-LQSKDYHYEDVWPEDVIYKGYGG-VDCVE 85 (271)
T ss_pred HHHHHHHHHHHHH--CCCEEEEECCC----CHHHHHHHHCCCCCCCHHHH-HHHHCCCCCCCCHHHHHHCCCCC-CEEEE
T ss_conf 5889999999998--79979997899----73777740069988859999-97537873216499998527788-46654
Q ss_pred CCCCCC----------CCHHHHHHHH--HHCCCEEEECCCCHHHHHHHHCCCCCCCCCC
Q ss_conf 524353----------6379999886--4179789918620124432000123220023
Q gi|254780349|r 182 TAYSRV----------WDWERFRSIA--DSIGAYLMADISHISGLVVGGQHPSPVPHCH 228 (433)
Q Consensus 182 S~y~~~----------~d~~~l~eIa--~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~AD 228 (433)
|--|-| .-++.+.+.- ++. -+++|| ++|=|..|-|..|+.+||
T Consensus 86 aGGPepGvGCaGrgi~~~i~lL~~l~~~~d~-D~V~yD---vlgDVVCGGFa~Pi~~Ad 140 (271)
T CHL00072 86 AGGPPAGAGCGGYVVGETVKLLKELNAFYEY-DVILFD---VLGDVVCGGFAAPLNYAD 140 (271)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC-CEEEEE---CCCCCCCCCCCCCCCCCC
T ss_conf 3899988777886519999999973762138-889994---477655654567500088
No 416
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase; InterPro: IPR011283 This entry represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of 1.1.1.36 from EC is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. ; GO: 0018454 acetoacetyl-CoA reductase activity, 0042619 poly-hydroxybutyrate biosynthetic process, 0005737 cytoplasm.
Probab=51.16 E-value=7.4 Score=19.57 Aligned_cols=33 Identities=15% Similarity=0.256 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCC--CC-CCCCCCEEEE
Q ss_conf 999988899999986168523--34-5888981263
Q gi|254780349|r 294 KQIVLNSQALAKKLQFLGFDI--VS-GGTDNHLMLV 326 (433)
Q Consensus 294 ~qvv~NA~~La~~L~~~G~~v--v~-ggTd~H~vlv 326 (433)
.=++=-+++||++....|+.| |+ ||++|-||.-
T Consensus 156 AG~iGFTkALA~E~A~kGvTVN~i~PGYi~T~MV~A 191 (244)
T TIGR01829 156 AGMIGFTKALAQEGARKGVTVNVIAPGYIATDMVMA 191 (244)
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHH
T ss_conf 215677799997211038567545588988667786
No 417
>PRK01130 N-acetylmannosamine-6-phosphate 2-epimerase; Provisional
Probab=50.84 E-value=19 Score=16.65 Aligned_cols=70 Identities=20% Similarity=0.235 Sum_probs=48.2
Q ss_pred CCHHHHHHHHHHHCCCEEEEECCCCCCC--CCHHHHHHHHH-HCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEECCC
Q ss_conf 5989999999860466789705524353--63799998864-1797899186201244320001232200235674045
Q gi|254780349|r 160 LDMHEIESLAIEYNPKLIIVGGTAYSRV--WDWERFRSIAD-SIGAYLMADISHISGLVVGGQHPSPVPHCHIVTTTTH 235 (433)
Q Consensus 160 ID~d~~~~~a~~~kPklIi~G~S~y~~~--~d~~~l~eIa~-~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt~sTH 235 (433)
--++++.+++. -...+|=++.+.-+|| ..+++|-+-.+ +.|+++|+|+|-+--=+.+-. + -+|+|.+|-.
T Consensus 76 Pt~~ev~~l~~-aGadiIA~DaT~R~RP~g~~~~~~i~~i~~~~~~l~MAD~st~eea~~A~~----~-G~D~V~TTLs 148 (222)
T PRK01130 76 PTLKEVDALAA-AGADIIALDATLRPRPDGETLAELVKRIKEKPGQLLMADCSTLEEGLAAAK----L-GFDFIGTTLS 148 (222)
T ss_pred CCHHHHHHHHH-CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHH----C-CCCEEECCCC
T ss_conf 76999999998-699999984678989899689999999999829878985488999999998----4-9999972334
No 418
>PRK12607 phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional
Probab=50.84 E-value=19 Score=16.65 Aligned_cols=40 Identities=13% Similarity=0.152 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCC-----CC-CCCCEEEEC
Q ss_conf 48999999998889999998616852334-----58-889812631
Q gi|254780349|r 288 EFRDYAKQIVLNSQALAKKLQFLGFDIVS-----GG-TDNHLMLVD 327 (433)
Q Consensus 288 ~f~~Ya~qvv~NA~~La~~L~~~G~~vv~-----gg-Td~H~vlvd 327 (433)
++....+..++--+.+.+.+.++|+-++- |- .+..++|+|
T Consensus 171 ~~~~i~~~sl~i~~~~~~~~~~~GiiLvDtK~EFG~d~~G~iiL~D 216 (295)
T PRK12607 171 QWYTLESMALALFTRGEEIAAEQGLILADTKYEFGRDADGRIILAD 216 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEE
T ss_conf 9999999999999999999997897899852331266999889976
No 419
>cd00145 POLBc DNA polymerase type-B family catalytic domain. DNA-directed DNA polymerases elongate DNA by adding nucleotide triphosphate (dNTP) residues to the 5'-end of the growing chain of DNA. DNA-directed DNA polymerases are multifunctional with both synthetic (polymerase) and degradative modes (exonucleases) and play roles in the processes of DNA replication, repair, and recombination. DNA-dependent DNA polymerases can be classified in six main groups based upon their phylogenetic relationships with E. coli polymerase I (class A), E. coli polymerase II (class B), E. coli polymerase III (class C), euryarchaeota polymerase II (class D), human polymerase beta (class x), E. coli UmuC/DinB, and eukaryotic RAP 30/Xeroderma pigmentosum variant (class Y). Family B DNA polymerases include E. coli DNA polymerase II, some eubacterial phage DNA polymerases, nuclear replicative DNA polymerases (alpha, delta, epsilon, and zeta), and eukaryotic viral and plasmid-borne enzymes. DNA polymerase is
Probab=50.75 E-value=19 Score=16.65 Aligned_cols=57 Identities=23% Similarity=0.416 Sum_probs=34.2
Q ss_pred HCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC
Q ss_conf 6543223445566689999999973564899999999888999999861685233458889812631
Q gi|254780349|r 261 IFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVD 327 (433)
Q Consensus 261 vfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvd 327 (433)
.|=|..|... .+...+.+| ++. ..++++++..++.+++ +.|+.|+.|-|||=.|...
T Consensus 113 S~YG~~G~~~-~r~~~~~~A--~si----T~~GR~~i~~~~~~ie---~~g~~VIYGDTDSifV~~~ 169 (323)
T cd00145 113 SFYGYLGAKF-FRFYDPEVA--ASI----TSFGREIIQDTIALVE---EHGARVIYGDTDSIFVSLP 169 (323)
T ss_pred HCCCCCCCCC-CCCCCHHHH--HHH----HHHHHHHHHHHHHHHH---HCCCEEEEECCCEEEEECC
T ss_conf 2202047787-765774677--898----6989999999999999---8399779975760588559
No 420
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=50.73 E-value=6.3 Score=20.06 Aligned_cols=19 Identities=11% Similarity=0.419 Sum_probs=13.1
Q ss_pred HCCCCEEEECCCCCCCCCC
Q ss_conf 1548748812334484111
Q gi|254780349|r 116 MHPGDSFMGLSLDSGGHLT 134 (433)
Q Consensus 116 l~pGD~Il~~~l~~GGHls 134 (433)
+.|+++|...+...|-.++
T Consensus 37 i~~~E~V~V~N~~NG~Rf~ 55 (111)
T cd06919 37 ILPYEKVLVVNVNNGARFE 55 (111)
T ss_pred CCCCCEEEEEECCCCCEEE
T ss_conf 9989889999898994789
No 421
>KOG1014 consensus
Probab=50.67 E-value=20 Score=16.63 Aligned_cols=62 Identities=10% Similarity=0.237 Sum_probs=30.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHHC--CCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECC
Q ss_conf 333332201366583235659899999-998604--66789705524353637999988641797899186
Q gi|254780349|r 141 MSGKWFKAIPYNVRKEDGLLDMHEIES-LAIEYN--PKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADI 208 (433)
Q Consensus 141 ~~g~~~~~~~y~~d~~~~~ID~d~~~~-~a~~~k--PklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~ 208 (433)
+.-++|+++--.-+.+. ++++.+ +.++++ -+.|+++... ++. +|+.+++-.....-=+++..
T Consensus 69 LAkrG~nvvLIsRt~~K----L~~v~kEI~~~~~vev~~i~~Dft~-~~~-~ye~i~~~l~~~~VgILVNN 133 (312)
T KOG1014 69 LAKRGFNVVLISRTQEK----LEAVAKEIEEKYKVEVRIIAIDFTK-GDE-VYEKLLEKLAGLDVGILVNN 133 (312)
T ss_pred HHHCCCEEEEEECCHHH----HHHHHHHHHHHHCCEEEEEEEECCC-CCH-HHHHHHHHHCCCCEEEEEEC
T ss_conf 99759879999688899----9999999988758079999986489-815-68999988627864899965
No 422
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=50.25 E-value=20 Score=16.58 Aligned_cols=49 Identities=22% Similarity=0.246 Sum_probs=37.8
Q ss_pred CCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEE
Q ss_conf 35659899999998604667897055243536379999886417978991
Q gi|254780349|r 157 DGLLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMA 206 (433)
Q Consensus 157 ~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~ 206 (433)
.+.++.++++++.. .+|.+|++|.-.+.+.-=-++-++.+.+-+|-++.
T Consensus 46 SHkl~~eEle~~le-e~~E~ivvGTG~~G~l~l~~ea~e~~r~k~~~vi~ 94 (121)
T COG1504 46 SHKLALEELEELLE-EGPEVIVVGTGQSGMLELSEEAREFFRKKGCEVIE 94 (121)
T ss_pred CCCCCHHHHHHHHH-CCCCEEEEECCCEEEEEECHHHHHHHHHCCCEEEE
T ss_conf 33469999999986-09968999148425899589999999854970798
No 423
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=50.08 E-value=18 Score=16.96 Aligned_cols=51 Identities=12% Similarity=0.082 Sum_probs=25.3
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCH------------HHHHHHHHHCCCEE
Q ss_conf 8323565989999999860466789705524353637------------99998864179789
Q gi|254780349|r 154 RKEDGLLDMHEIESLAIEYNPKLIIVGGTAYSRVWDW------------ERFRSIADSIGAYL 204 (433)
Q Consensus 154 d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~------------~~l~eIa~~~ga~l 204 (433)
+.+...=+++++.+.+++..+++++++...++...++ +.++++|++.+..+
T Consensus 86 ~~~~~~~~l~~li~~~~~~~~~ii~~~~p~~~~~~~~~~~~~~~~~~~n~~~~~~a~~~~~~~ 148 (185)
T cd01832 86 DPDTYRADLEEAVRRLRAAGARVVVFTIPDPAVLEPFRRRVRARLAAYNAVIRAVAARYGAVH 148 (185)
T ss_pred CHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_conf 999999999999999986899699995778765664204578999999999999998677489
No 424
>TIGR01283 nifE nitrogenase MoFe cofactor biosynthesis protein NifE; InterPro: IPR005973 The enzyme responsible for nitrogen fixation, the nitrogenase, shows a high degree of conservation of structure, function, and amino acid sequence across wide phylogenetic ranges. All known Mo-nitrogenases consist of two components, component I (also called dinitrogenase, or Fe-Mo protein), an alpha2beta2 tetramer encoded by the nifD and nifK genes, and component II (dinitrogenase reductase, or Fe protein) a homodimer encoded by the nifH gene. Two operons, nifDK and nifEN, encode a tetrameric (alpha2beta2 and N2E2) enzymatic complex. Nitrogenase contains two unusual rare metal clusters; one of them is the iron molybdenum cofactor (FeMo-co), which is considered to be the site of dinitrogen reduction and whose biosynthesis requires the products of nifNE and of some other nif genes. It has been proposed that NifNE might serve as a scaffold upon which FeMo-co is built and then inserted into component I. ; GO: 0005515 protein binding, 0006461 protein complex assembly, 0009399 nitrogen fixation.
Probab=49.01 E-value=21 Score=16.46 Aligned_cols=105 Identities=20% Similarity=0.301 Sum_probs=69.2
Q ss_pred CEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCC---------CCCCCCCCCCCCCCCC-----
Q ss_conf 30100001679999999983154874881233448411147665433333---------2201366583235659-----
Q gi|254780349|r 96 FVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKW---------FKAIPYNVRKEDGLLD----- 161 (433)
Q Consensus 96 ~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~---------~~~~~y~~d~~~~~ID----- 161 (433)
-++-.|.||+...-++.+ -|-+|.-+|..+-=||=||.-...+.-| -+....++.-|=.+.|
T Consensus 34 ~cD~~s~~g~~tqr~Cvf----dGA~vvL~PItDaaHLVHGPIgCAg~tWD~RGs~SSGp~LyR~gFsTDL~E~DVifGr 109 (470)
T TIGR01283 34 DCDKNSLSGGATQRGCVF----DGARVVLLPITDAAHLVHGPIGCAGSTWDIRGSRSSGPELYRLGFSTDLTEKDVIFGR 109 (470)
T ss_pred CCCCCCCCCCCCCCCEEC----CCCEEEEECCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEECC
T ss_conf 666788787645651101----4755661001273552255222211570114443561445136663266024667331
Q ss_pred -----HHHHHHHHHHHCCCEEEEECCCCC-CC--CCHHHHHHHH-HHCCCEEE
Q ss_conf -----899999998604667897055243-53--6379999886-41797899
Q gi|254780349|r 162 -----MHEIESLAIEYNPKLIIVGGTAYS-RV--WDWERFRSIA-DSIGAYLM 205 (433)
Q Consensus 162 -----~d~~~~~a~~~kPklIi~G~S~y~-~~--~d~~~l~eIa-~~~ga~l~ 205 (433)
|.++.++.+++.|..|++ +|.+. -. -|++.+.+-| .+.|..++
T Consensus 110 GEKKL~~aI~e~v~~Y~P~AvFV-YsTCv~alIGDD~~AVCk~A~~k~G~~Vi 161 (470)
T TIGR01283 110 GEKKLFHAIREIVERYHPAAVFV-YSTCVVALIGDDLEAVCKAAAEKYGIPVI 161 (470)
T ss_pred HHHHHHHHHHHHHHHCCCCEEEE-ECCEECCEECCCHHHHHHHHHHCCCCCEE
T ss_conf 44789999999986329974899-45713102448889999999723586067
No 425
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=48.58 E-value=6.5 Score=19.95 Aligned_cols=59 Identities=17% Similarity=0.318 Sum_probs=30.3
Q ss_pred HCCCCEEEECCCCCCCCCCC----CCCCC----CC---------CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEE
Q ss_conf 15487488123344841114----76654----33---------333220136658323565989999999860466789
Q gi|254780349|r 116 MHPGDSFMGLSLDSGGHLTH----GSSVN----MS---------GKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLII 178 (433)
Q Consensus 116 l~pGD~Il~~~l~~GGHlsh----g~~~~----~~---------g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi 178 (433)
+.|+++|...++..|-.++. |.+.+ +- |-..-...| ..+|.++ +..++|++|+
T Consensus 38 i~~~E~V~V~Nv~NG~Rf~TYvI~g~~GSg~I~lNGaAAr~~~~GD~vII~sy------~~~~~~e----~~~~~P~vv~ 107 (126)
T PRK05449 38 ILENEKVDIVNVNNGARFETYVIKGERGSGVICLNGAAARLVQVGDLVIIAAY------AQMDEEE----AKTHKPKVVF 107 (126)
T ss_pred CCCCCEEEEEECCCCCEEEEEEEECCCCCCEEEECCHHHHCCCCCCEEEEEEC------CCCCHHH----HHCCCCEEEE
T ss_conf 99898899998989958999998647988758756678722799999999986------6379889----7368777999
Q ss_pred EECCCC
Q ss_conf 705524
Q gi|254780349|r 179 VGGTAY 184 (433)
Q Consensus 179 ~G~S~y 184 (433)
++...-
T Consensus 108 vd~~N~ 113 (126)
T PRK05449 108 VDEDNR 113 (126)
T ss_pred ECCCCC
T ss_conf 899986
No 426
>KOG0062 consensus
Probab=47.95 E-value=21 Score=16.35 Aligned_cols=45 Identities=7% Similarity=0.041 Sum_probs=22.4
Q ss_pred CCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHH-HHHHHHHHCCCEEEECCCCH
Q ss_conf 659899999998604667897055243536379-99988641797899186201
Q gi|254780349|r 159 LLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWE-RFRSIADSIGAYLMADISHI 211 (433)
Q Consensus 159 ~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~-~l~eIa~~~ga~l~~D~aH~ 211 (433)
.=||+++.+.-.+-+ +.--|.++.+ ..|++.......+=|.++.-
T Consensus 277 kGN~~~Fvk~k~E~~--------~n~qrefe~q~~~R~h~q~fid~FrYna~ra 322 (582)
T KOG0062 277 KGNYSQFVKTKPEAK--------KNQQREFEVQMKYRAHLQVFIDKFRYNAARA 322 (582)
T ss_pred CCCHHHHHHHHHHHH--------HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 486999987447766--------5466523058889999999898701675556
No 427
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=47.42 E-value=22 Score=16.29 Aligned_cols=95 Identities=15% Similarity=0.152 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHCC---CEEEEE-----CCCCCCC----CCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCC-CCCC
Q ss_conf 8999999986046---678970-----5524353----6379999886417978991862012443200012322-0023
Q gi|254780349|r 162 MHEIESLAIEYNP---KLIIVG-----GTAYSRV----WDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPV-PHCH 228 (433)
Q Consensus 162 ~d~~~~~a~~~kP---klIi~G-----~S~y~~~----~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl-~~AD 228 (433)
.+++.+.|+..|- ++.-.| .|-|+|- .-++.++++.++.|..++.+.....-+= .+ +|+|
T Consensus 106 ~eq~~~~A~~vk~~ga~~lRgGa~KPRTsPysFqGlg~eGL~~L~~~~~e~GlpvvTEV~~~~~ve-------~v~~~vD 178 (335)
T PRK08673 106 EEQILEIARAVKEAGAQILRGGAFKPRTSPYSFQGLGEEGLKLLAEAREETGLPIVTEVMDPRDVE-------LVAEYAD 178 (335)
T ss_pred HHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHH-------HHHHHCC
T ss_conf 999999999999779968806665789998541455166999999999986995289966899999-------9996497
Q ss_pred EEEECCCCCCCCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHH
Q ss_conf 5674045652256744898336205650166465432234455666
Q gi|254780349|r 229 IVTTTTHKSLRGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSI 274 (433)
Q Consensus 229 vvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~i 274 (433)
++--.+- .+.+.++-+.+.++--|-+.-.+...++
T Consensus 179 ilQIGAR-----------nmqN~~LL~evg~~~kPVllKrg~~~ti 213 (335)
T PRK08673 179 ILQIGAR-----------NMQNFDLLKEVGKTNKPVLLKRGMSATI 213 (335)
T ss_pred EEEECHH-----------HHCCHHHHHHHHHHCCEEEECCCCCCCH
T ss_conf 9998915-----------5059999999997299489737887889
No 428
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase; InterPro: IPR006464 Histone acetylation is carried out by a class of enzymes known as histone acetyltransferases (HATs), which catalyse the transfer of an acetyl group from acetyl-CoA to the lysine E-amino groups on the N-terminal tails of histones. Early indication that HATs were involved in transcription came from the observation that in actively transcribed regions of chromatin, histones tend to be hyperacetylated, whereas in transcriptionally silent regions histones are hypoacetylated. The histone acetyltransferases are divided into five families. These include the Gcn5-related acetyltransferases (GNATs); the MYST (for 'MOZ, Ybf2/Sas3, Sas2 and Tip60)-related HATs; p300/CBP HATs; the general transcription factor HATs, which include the TFIID subunit TAF250; and the nuclear hormone-related HATs SRC1 and ACTR (SRC3). The GCN5-related N-acetyltransferase superfamily includes such enzymes as the histone acetyltransferases GCN5 and Hat1, the elongator complex subunit Elp3, the mediator-complex subunit Nut1, and Hpa2 . Many GNATs share several functional domains, including an N-terminal region of variable length, an acetyltransferase domain that encompasses the conserved sequence motifs described above, a region that interacts with the coactivator Ada2, and a C-terminal bromodomain that is believed to interact with acetyl-lysine residues. Members of the GNAT family are important for the regulation of cell growth and development. In mice, knockouts of Gcn5L are embryonic lethal. Yeast Gcn5 is needed for normal progression through the G2M boundary and mitotic gene expression. The importance of GNATs is probably related to their role in transcription and DNA repair. Members of this entry belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This entry covers prokaryotes and the archaea. It contains rimI, which catalyses the acetylation of the N-terminal alanine of ribosomal protein S18 .; GO: 0016407 acetyltransferase activity, 0006474 N-terminal protein amino acid acetylation.
Probab=47.17 E-value=14 Score=17.65 Aligned_cols=60 Identities=18% Similarity=0.339 Sum_probs=48.3
Q ss_pred CCCCC--CCCCHHHHHH-HH-HHCCCEEEEC-CCCHHHHHHH-HCCCCCCCCCCEEEECCCCCCCC
Q ss_conf 55243--5363799998-86-4179789918-6201244320-00123220023567404565225
Q gi|254780349|r 181 GTAYS--RVWDWERFRS-IA-DSIGAYLMAD-ISHISGLVVG-GQHPSPVPHCHIVTTTTHKSLRG 240 (433)
Q Consensus 181 ~S~y~--~~~d~~~l~e-Ia-~~~ga~l~~D-~aH~~GLIa~-g~~~~Pl~~ADvvt~sTHKtl~G 240 (433)
..+|+ +|+.-+-|++ .. ....++++++ .+.+.|-+.+ .+.+=++++|||..-.-||-.+|
T Consensus 10 ~~af~~~~PW~~~~f~~~l~i~~~~~yl~a~~g~~~~Gy~~~~r~~~~~~~Ea~i~~iaV~pe~Qg 75 (140)
T TIGR01575 10 KAAFTVDSPWTEAAFAEELAINYYTCYLLAEIGGKVVGYIGISRIVQIVLDEAHILNIAVKPEYQG 75 (140)
T ss_pred HHHHCCCCCCCHHHHHHHHCCCCCCEEEEEEECCEEEEEEEEEEEEEEECCCCEEEEEEECCCCCC
T ss_conf 987169999887898865101333014456628778987765678875437744899988712016
No 429
>COG1163 DRG Predicted GTPase [General function prediction only]
Probab=46.22 E-value=23 Score=16.17 Aligned_cols=16 Identities=19% Similarity=0.146 Sum_probs=10.9
Q ss_pred CCCCHHHHHHHHHHCC
Q ss_conf 5363799998864179
Q gi|254780349|r 186 RVWDWERFRSIADSIG 201 (433)
Q Consensus 186 ~~~d~~~l~eIa~~~g 201 (433)
-.+|.+.++.|.++.+
T Consensus 197 ~~~d~~~ir~iL~Ey~ 212 (365)
T COG1163 197 THLDEDTVRAILREYR 212 (365)
T ss_pred CCCCHHHHHHHHHHHC
T ss_conf 6689999999999728
No 430
>KOG2099 consensus
Probab=45.89 E-value=6.8 Score=19.81 Aligned_cols=193 Identities=22% Similarity=0.301 Sum_probs=104.0
Q ss_pred CCCCCHHHHHHHH--HHCCCEEEECCCCHHHHHHHHCCCCCCC--CCCEEEECCCCCCC--------------CCCCEEE
Q ss_conf 3536379999886--4179789918620124432000123220--02356740456522--------------5674489
Q gi|254780349|r 185 SRVWDWERFRSIA--DSIGAYLMADISHISGLVVGGQHPSPVP--HCHIVTTTTHKSLR--------------GPRGGLI 246 (433)
Q Consensus 185 ~~~~d~~~l~eIa--~~~ga~l~~D~aH~~GLIa~g~~~~Pl~--~ADvvt~sTHKtl~--------------GPrgGiI 246 (433)
.||-|+.++|.+. ++...--...|||.. |+|+.--|-+. |+|++-.|..|-|- -||.=+.
T Consensus 418 ~fp~D~drlrrmsiiee~~~~k~i~MA~L~--ivgsHaVNGVa~iHSeilK~~~F~Df~e~~P~KFqNkTNGITPRRWL~ 495 (843)
T KOG2099 418 KFPGDVDRLRRMSIIEENSPEKRINMAHLC--IVGSHAVNGVAEIHSEILKQSVFKDFYELEPEKFQNKTNGITPRRWLL 495 (843)
T ss_pred HCCCCHHHHHHHHHHHCCCCCCEEEEEEEE--EECCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHH
T ss_conf 778738887663454148840011202135--421332200899999999999988899748297525557847789998
Q ss_pred EECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHH-HHCHHH-HHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCE
Q ss_conf 8336205650166465432234455666899999999-735648-999999998889999998616-8523345888981
Q gi|254780349|r 247 MTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGE-ALSSEF-RDYAKQIVLNSQALAKKLQFL-GFDIVSGGTDNHL 323 (433)
Q Consensus 247 ~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~E-a~~~~f-~~Ya~qvv~NA~~La~~L~~~-G~~vv~ggTd~H~ 323 (433)
+|| +.+++-|-..+---.. .++. +...|+. +-.++| +++++--.+|-..|++.|.+. |++|- .+-
T Consensus 496 ~cn-P~LadlI~e~ige~~i--~dl~----~l~~L~~~a~d~~f~~~~a~vK~~NKlk~a~~le~e~~v~in----p~s- 563 (843)
T KOG2099 496 LCN-PGLADLITEKIGEEWI--TDLD----QLTKLRKFADDEEFQREWAKVKQENKLKLAAYLEKEYGVKIN----PSS- 563 (843)
T ss_pred HCC-CHHHHHHHHHHHHHHH--HHHH----HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC----CCH-
T ss_conf 649-2188999998506764--0499----999999860669899999999886378999999897396237----513-
Q ss_pred EEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 26316655676799999888567188037899899998889851224666730799989999999999999602
Q gi|254780349|r 324 MLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 324 vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
+.|+.-+.+--. --+.|.-.||+.-.|.+--||...++|.-+-+|--+..+.-| -+.|-.+|..+-+.
T Consensus 564 -mFDiqVKRIHEY-KRQllN~l~vi~~y~riK~e~~k~fvprtvm~GGKaapgY~m----AK~Iiklit~V~dv 631 (843)
T KOG2099 564 -MFDIQVKRIHEY-KRQLLNCLHVIYLYNRIKEEPAKAFVPRTVMIGGKAAPGYHM----AKLIIKLITAVADV 631 (843)
T ss_pred -HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHH----HHHHHHHHHHHHHH
T ss_conf -344668899999-999987899999999976424540686079986726730689----99999999998877
No 431
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=45.55 E-value=23 Score=16.10 Aligned_cols=16 Identities=13% Similarity=0.221 Sum_probs=7.0
Q ss_pred CHHHHHHHHHHHCCCE
Q ss_conf 9899999998604667
Q gi|254780349|r 161 DMHEIESLAIEYNPKL 176 (433)
Q Consensus 161 D~d~~~~~a~~~kPkl 176 (433)
+|.++-+.+++..|+.
T Consensus 65 ~~~~li~~ir~~~P~~ 80 (157)
T cd01833 65 RLRALIDQMRAANPDV 80 (157)
T ss_pred HHHHHHHHHHHHCCCC
T ss_conf 9999999999978998
No 432
>TIGR00730 TIGR00730 conserved hypothetical protein TIGR00730; InterPro: IPR005269 This family of conserved hypothetical proteins has no known function. .
Probab=45.33 E-value=21 Score=16.34 Aligned_cols=44 Identities=16% Similarity=0.112 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCE
Q ss_conf 99999999999987188630100001679999999983154874
Q gi|254780349|r 78 DDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDS 121 (433)
Q Consensus 78 d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~ 121 (433)
|+..++|.|+-..+-+.=|-=|---|-.-++-++-.|...+|..
T Consensus 15 ~~y~~~A~elG~~~~~~G~~lV~GGG~~g~Mg~~a~a~~~~GG~ 58 (205)
T TIGR00730 15 AEYLELAAELGAALAGAGWGLVYGGGRVGLMGAIAQAAMEAGGV 58 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCC
T ss_conf 89988899999999858956988798715478998887507984
No 433
>TIGR01852 lipid_A_lpxA acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; InterPro: IPR010137 This entry describes LpxA, an enzyme for the biosynthesis of lipid A, a component of lipopolysaccharide (LPS) in the outer membrane outer leaflet of most Gram-negative bacteria. Some differences are found between lipid A of different species, but this protein represents the first step (from UDP-N-acetyl-D-glucosamine) and appears to be conserved in function. Proteins from this family contain many copies of the bacterial transferase hexapeptide repeat.; GO: 0008780 acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity, 0008610 lipid biosynthetic process.
Probab=45.30 E-value=23 Score=16.07 Aligned_cols=93 Identities=16% Similarity=0.288 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC-CCCCHHHHHHHHHHCCEEEECCCCCCCC--CC-CCCCCCC-CC
Q ss_conf 999888999999861685233458889812631665-5676799999888567188037899899--99-8889851-22
Q gi|254780349|r 295 QIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRS-KRMTGKRAESILGRVSITCNKNSIPFDP--ES-PFITSGI-RL 369 (433)
Q Consensus 295 qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~-~~~~G~~a~~~Le~~gI~~Nkn~iP~D~--~~-~~~~sGi-Rl 369 (433)
=|++|.-.||-.-.=-.|-+++|.|--||+.- ... -.+.|.. -++|.-+||-- .. +....|| .+
T Consensus 126 vv~aN~a~LAGHV~vgD~a~iGG~~avHQFvR-IG~~aMigG~s----------~v~~DvpPY~~~~G~~~a~l~GlN~v 194 (257)
T TIGR01852 126 VVLANNATLAGHVEVGDYAIIGGLVAVHQFVR-IGRYAMIGGLS----------AVSKDVPPYGLVEGNSRAVLRGLNIV 194 (257)
T ss_pred EEEECCCEECEEEEECCEEEECCCCCEEEEEE-EHHHHHHHHHC----------CCCCCCCCCEEECCCCCCEEEEEEEE
T ss_conf 69813631222799888999778972110133-00023221200----------24678776178637875337887013
Q ss_pred CCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 46667307999899999999999996025776
Q gi|254780349|r 370 GTPSGTTRGFKEKDFEYIGELIAQILDGSSSD 401 (433)
Q Consensus 370 GT~aiTtrG~~e~em~~iA~li~~~L~~~~~~ 401 (433)
| |.||||.++++..|-+....+.....+.
T Consensus 195 G---LrR~Gf~~~~i~~i~~ayr~lfr~~~~~ 223 (257)
T TIGR01852 195 G---LRRRGFDREEITAIKKAYRLLFRSGLPL 223 (257)
T ss_pred E---EECCCCCHHHHHHHHHHHHHHHCCCCCH
T ss_conf 2---2137879899999999988761799898
No 434
>COG4607 CeuA ABC-type enterochelin transport system, periplasmic component [Inorganic ion transport and metabolism]
Probab=44.87 E-value=21 Score=16.45 Aligned_cols=44 Identities=32% Similarity=0.437 Sum_probs=28.3
Q ss_pred CCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCC
Q ss_conf 56598999999986046678970552435363799998864179789918620
Q gi|254780349|r 158 GLLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISH 210 (433)
Q Consensus 158 ~~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH 210 (433)
.+.|||++.. .+|.|||+|+-. .--|.+|.+||-- ..+=+|..+
T Consensus 107 fEPD~Eai~a----~kPdLIIiggR~---ak~yd~l~kiAPt--i~l~~d~~n 150 (320)
T COG4607 107 FEPDYEAIAA----AKPDLIIIGGRA---AKAYDKLSKIAPT--IDLGADTAN 150 (320)
T ss_pred CCCCHHHHHH----CCCCEEEECCHH---HHHHHHHHHHCCE--EEECCCHHH
T ss_conf 5878899974----499889977477---7779999853874--785265678
No 435
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=44.81 E-value=24 Score=16.02 Aligned_cols=127 Identities=19% Similarity=0.292 Sum_probs=65.5
Q ss_pred HCCCCEEEECCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC---CEEEEE-----CCCCCC
Q ss_conf 15487488123344841-114766543333322013665832356598999999986046---678970-----552435
Q gi|254780349|r 116 MHPGDSFMGLSLDSGGH-LTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNP---KLIIVG-----GTAYSR 186 (433)
Q Consensus 116 l~pGD~Il~~~l~~GGH-lshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kP---klIi~G-----~S~y~~ 186 (433)
.+|.|||+-+ +|+ +.-|.+.-..| |..+ + .++++.+.|+..|. +++=.| .|-|.|
T Consensus 100 ~~~~~t~v~v----~~~~iG~~~~~iIAG------PCsv--E----S~eQi~~~A~~vk~~G~~~lRgGa~KPRTsPysF 163 (360)
T PRK12595 100 KKPEDTIVDV----KGEIIGDGNQSFIFG------PCAV--E----SYEQVAAVAQALKAKGLKLLRGGAFKPRTSPYDF 163 (360)
T ss_pred CCCCCCEEEE----CCEEECCCCEEEEEC------CCCC--C----CHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC
T ss_conf 6888877987----999977996438956------8836--7----8999999999999759755725556899999765
Q ss_pred C----CCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCHHHHCCHHHC
Q ss_conf 3----637999988641797899186201244320001232200235674045652256744898336205650166465
Q gi|254780349|r 187 V----WDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHIVTTTTHKSLRGPRGGLIMTNHADLAKKINSAIF 262 (433)
Q Consensus 187 ~----~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~avf 262 (433)
. .-++.+++++++.|-.++.......-+= --.+|+|++.-.+ | =+.| .++-+.+.++--
T Consensus 164 qGlG~eGL~~L~~a~~e~gl~vvTEV~~~~~ve------~~~~yvDilqIGA-------R---nmqN-f~LLk~vg~~~k 226 (360)
T PRK12595 164 QGLGVEGLKILKQVADEYDLAVISEIVNPNDVE------VALDYVDVIQIGA-------R---NMQN-FELLKAAGRVNK 226 (360)
T ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHH------HHHHHCCEEEECC-------H---HCCC-HHHHHHHHCCCC
T ss_conf 768457999999999985997279857888999------9997486898884-------1---0359-999999861399
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 4322344556668
Q gi|254780349|r 263 PGLQGGPFMHSIA 275 (433)
Q Consensus 263 Pg~qg~~~~~~ia 275 (433)
|-+.-.+...+|-
T Consensus 227 PVLlKrg~~ati~ 239 (360)
T PRK12595 227 PVLLKRGLSATIE 239 (360)
T ss_pred CEEEECCCCCCHH
T ss_conf 3796079999999
No 436
>cd00957 Transaldolase_TalAB Transaldolases including both TalA and TalB. The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution.
Probab=44.65 E-value=24 Score=16.01 Aligned_cols=13 Identities=8% Similarity=0.072 Sum_probs=6.9
Q ss_pred CCCEEEECCCCHH
Q ss_conf 7978991862012
Q gi|254780349|r 200 IGAYLMADISHIS 212 (433)
Q Consensus 200 ~ga~l~~D~aH~~ 212 (433)
.+..|++-.++-.
T Consensus 151 ~n~TlvFs~~QA~ 163 (313)
T cd00957 151 CNLTLLFSFAQAV 163 (313)
T ss_pred EEEEEECCHHHHH
T ss_conf 4367764799999
No 437
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=44.49 E-value=21 Score=16.42 Aligned_cols=85 Identities=15% Similarity=0.152 Sum_probs=38.4
Q ss_pred CHHHHHHHHHHHHHHHCC-CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEE
Q ss_conf 001679999999983154-8748812334484111476654333332201366583235659899999998604667897
Q gi|254780349|r 101 SHSGSQMNQGVFLALMHP-GDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIV 179 (433)
Q Consensus 101 p~SG~~An~av~~ALl~p-GD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~ 179 (433)
.+.|+.-..+...-|..- ++-+++.-...|+-+. ....+ -...|..+.+++.+..++++-+++|=
T Consensus 7 vlGGT~Dar~la~~L~~~~~~~~~ss~t~~g~~l~-----------~~~~~---~~~~G~l~~e~l~~~l~e~~i~llID 72 (257)
T COG2099 7 LLGGTSDARALAKKLAAAPVDIILSSLTGYGAKLA-----------EQIGP---VRVGGFLGAEGLAAFLREEGIDLLID 72 (257)
T ss_pred EEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCH-----------HCCCC---EEECCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 98263899999998620686179997034442411-----------10588---66527688789999999749888997
Q ss_pred ECCCCCCCCCHH-----HHHHHHHHCCCEEE
Q ss_conf 055243536379-----99988641797899
Q gi|254780349|r 180 GGTAYSRVWDWE-----RFRSIADSIGAYLM 205 (433)
Q Consensus 180 G~S~y~~~~d~~-----~l~eIa~~~ga~l~ 205 (433)
-. +||+ -..++|++.|...+
T Consensus 73 AT------HPyAa~iS~Na~~aake~gipy~ 97 (257)
T COG2099 73 AT------HPYAARISQNAARAAKETGIPYL 97 (257)
T ss_pred CC------CHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 88------75799998999999998599679
No 438
>PRK07449 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; Validated
Probab=44.48 E-value=24 Score=15.99 Aligned_cols=38 Identities=21% Similarity=0.267 Sum_probs=25.1
Q ss_pred HHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECC
Q ss_conf 999860466789705524353637999988641797899186
Q gi|254780349|r 167 SLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADI 208 (433)
Q Consensus 167 ~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~ 208 (433)
.+....|| +|++|... ..--++++++|++.|+.++.|.
T Consensus 210 ~l~~a~rp-vIiaG~~~---~~a~~~l~~lae~l~~PVv~~~ 247 (548)
T PRK07449 210 DLDLSKRG-VVIAGRMP---AEEAQAAAALAQLLGWPLLADP 247 (548)
T ss_pred HHHHCCCE-EEEECCCC---HHHHHHHHHHHHHHCCCEEEEC
T ss_conf 99747990-99986897---7899999999998299899837
No 439
>PRK05762 DNA polymerase II; Reviewed
Probab=44.27 E-value=24 Score=15.97 Aligned_cols=36 Identities=17% Similarity=0.347 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC
Q ss_conf 999999998889999998616852334588898126316
Q gi|254780349|r 290 RDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDL 328 (433)
Q Consensus 290 ~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl 328 (433)
..++++++..++.+++ +.|++|+.|-||+=.|+...
T Consensus 520 T~~GR~~i~~t~~~~e---~~g~~ViYgDTDSifV~~~~ 555 (785)
T PRK05762 520 TMRGHEIMKQTRELIE---AQGYQVIYGDTDSTFVWLGG 555 (785)
T ss_pred HHHHHHHHHHHHHHHH---HCCCEEEEECCCEEEEECCC
T ss_conf 9999999999999999---86998999878626798799
No 440
>PRK13129 consensus
Probab=44.27 E-value=22 Score=16.20 Aligned_cols=94 Identities=15% Similarity=0.198 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC----CEEEEEC
Q ss_conf 999999998315487488123344841114766543333322013665832356598999999986046----6789705
Q gi|254780349|r 106 QMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNP----KLIIVGG 181 (433)
Q Consensus 106 ~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kP----klIi~G~ 181 (433)
.....++.+|.+-|--++-+-.+.-- +..-|-..+......- ++| ++++.+-+++++.|. .+|+.++
T Consensus 33 e~s~~~~~~l~~~GaDiiEiGiPfSD-------P~ADGpvIq~A~~~AL-~~G-~~~~~~~~~~~~~r~~~~~PivlM~Y 103 (267)
T PRK13129 33 ETTAEALLILQENGADLIELGIPYSD-------PLADGPVIQAAATRAL-QSG-TTLEKVLEMLESLKGKLTIPIILFTY 103 (267)
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCC-------CCCCCHHHHHHHHHHH-HCC-CCHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 99999999999779999997998888-------7765899999999999-769-87899999999854347888899861
Q ss_pred CCCCCCCCHHHHHHHHHHCCC--EEEECC
Q ss_conf 524353637999988641797--899186
Q gi|254780349|r 182 TAYSRVWDWERFRSIADSIGA--YLMADI 208 (433)
Q Consensus 182 S~y~~~~d~~~l~eIa~~~ga--~l~~D~ 208 (433)
-+-.+.+.+++|.+-|.+.|. +++.|.
T Consensus 104 ~N~i~~~G~e~F~~~~~~~GvdGvIipDL 132 (267)
T PRK13129 104 YNPLLNRGMERFCEQAAAAGVAGLVVPDL 132 (267)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEECCCC
T ss_conf 07898855999999998669875767899
No 441
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=44.23 E-value=24 Score=15.96 Aligned_cols=92 Identities=20% Similarity=0.157 Sum_probs=54.7
Q ss_pred CCEEEECCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHH
Q ss_conf 8748812334484111476654---3333322013665832356598999999986046678970552435363799998
Q gi|254780349|r 119 GDSFMGLSLDSGGHLTHGSSVN---MSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRS 195 (433)
Q Consensus 119 GD~Il~~~l~~GGHlshg~~~~---~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~e 195 (433)
.=+|+...+-.-||-- |.++. +....|+++.-+.. --.++..+.|.++....|.+..-.--....++.+.|
T Consensus 12 rprvlvak~GlDgHd~-gakvia~~l~d~GfeVi~~g~~-----~tp~e~v~aA~~~dv~vIgvSsl~g~h~~l~~~lve 85 (143)
T COG2185 12 RPRVLVAKLGLDGHDR-GAKVIARALADAGFEVINLGLF-----QTPEEAVRAAVEEDVDVIGVSSLDGGHLTLVPGLVE 85 (143)
T ss_pred CCEEEEECCCCCCCCC-CHHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHH
T ss_conf 8669995367654431-3199999998579379815875-----899999999986479889997344047899999999
Q ss_pred HHHHCCCEEEECCCCHHHHHHHHCCCCC
Q ss_conf 8641797899186201244320001232
Q gi|254780349|r 196 IADSIGAYLMADISHISGLVVGGQHPSP 223 (433)
Q Consensus 196 Ia~~~ga~l~~D~aH~~GLIa~g~~~~P 223 (433)
.+++.|.--+. +++||..|.+
T Consensus 86 ~lre~G~~~i~-------v~~GGvip~~ 106 (143)
T COG2185 86 ALREAGVEDIL-------VVVGGVIPPG 106 (143)
T ss_pred HHHHHCCCCEE-------EEECCCCCCH
T ss_conf 99981975548-------8656866813
No 442
>TIGR00250 TIGR00250 conserved hypothetical protein TIGR00250; InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VIIcolicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma urealyticum (Q9PQY7 from SWISSPROT, ). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase . This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC . ; GO: 0000150 recombinase activity, 0003677 DNA binding, 0004518 nuclease activity, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus.
Probab=44.16 E-value=21 Score=16.39 Aligned_cols=60 Identities=27% Similarity=0.314 Sum_probs=36.6
Q ss_pred CCCCCCH--HHHHHHHHHHCCCEEEEECCCC------CCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCC
Q ss_conf 2356598--9999999860466789705524------3536379999886417978991862012443200012322002
Q gi|254780349|r 156 EDGLLDM--HEIESLAIEYNPKLIIVGGTAY------SRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHC 227 (433)
Q Consensus 156 ~~~~ID~--d~~~~~a~~~kPklIi~G~S~y------~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~A 227 (433)
.++.-|| ..+++++++.+|..||+|-... |+. ++.+..|+.+- +.|.=|+.+.
T Consensus 32 ~~~~~d~Gl~~i~~l~ke~~~d~~vvGlP~nM~Gt~g~~~---~~~~kFA~r~~----------------~~~~v~v~l~ 92 (133)
T TIGR00250 32 QDGEPDWGLSRIEELLKEWKVDKIVVGLPLNMDGTVGPLT---KRAQKFAKRLE----------------GRFGVPVELM 92 (133)
T ss_pred CCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHH---HHHHHHHHHHH----------------HHHCCCEEEE
T ss_conf 0488862179999987315889788617878788725026---88899998865----------------5406643786
Q ss_pred CEEEECC
Q ss_conf 3567404
Q gi|254780349|r 228 HIVTTTT 234 (433)
Q Consensus 228 Dvvt~sT 234 (433)
|=--+|+
T Consensus 93 DERL~t~ 99 (133)
T TIGR00250 93 DERLSTV 99 (133)
T ss_pred CCCCCHH
T ss_conf 1761378
No 443
>KOG0630 consensus
Probab=43.95 E-value=25 Score=15.94 Aligned_cols=59 Identities=22% Similarity=0.308 Sum_probs=42.6
Q ss_pred CCCCCHHHHHHHHHH-----HCCCEEE--EECCCCCCCCCHHHHHHHHHHCC-CEEEECCCCHHHHH
Q ss_conf 356598999999986-----0466789--70552435363799998864179-78991862012443
Q gi|254780349|r 157 DGLLDMHEIESLAIE-----YNPKLII--VGGTAYSRVWDWERFRSIADSIG-AYLMADISHISGLV 215 (433)
Q Consensus 157 ~~~ID~d~~~~~a~~-----~kPklIi--~G~S~y~~~~d~~~l~eIa~~~g-a~l~~D~aH~~GLI 215 (433)
.|+||...+++++.+ .+|-++| +|.|.+...-.+-++++||.... -||..-.--++-|+
T Consensus 271 egriDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eahakfWLHasGhaiAALt 337 (838)
T KOG0630 271 EGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHAKFWLHASGHAIAALT 337 (838)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCHHHHHHHHHHHHHHHHEEEEECCCHHHHEE
T ss_conf 4402189999999888747998769987224023062178999999999742106750364223011
No 444
>COG3220 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=43.80 E-value=25 Score=15.92 Aligned_cols=91 Identities=19% Similarity=0.260 Sum_probs=56.0
Q ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC----CCEEEEECCCC
Q ss_conf 99999831548748812334484111476654333332201366583235659899999998604----66789705524
Q gi|254780349|r 109 QGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYN----PKLIIVGGTAY 184 (433)
Q Consensus 109 ~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~k----PklIi~G~S~y 184 (433)
+..+.+|++.-|... .+-|||.- ...|..|+..|.+.+++. ++.+.+.+++.+ -.+++=..|.|
T Consensus 77 l~~~k~li~r~~~~~-----~SeHL~~~---~~~g~~yDLlPlP~teea----~~~va~~I~~~Qd~LerplllEN~s~Y 144 (282)
T COG3220 77 LRRIKALIKRYDPAF-----FSEHLSYC---TDDGHLYDLLPLPFTEEA----VDHVAARIREVQDVLERPLLLENPSYY 144 (282)
T ss_pred HHHHHHHHHHHCCHH-----HHHHEEEE---CCCCEEECCCCCCCCHHH----HHHHHHHHHHHHHHHCCCEEECCCCCC
T ss_conf 999999998737025-----42211464---269833015667651999----999999999999986686363073010
Q ss_pred CC-C----CCHHHHHHHHHHCCCEEEECCCCH
Q ss_conf 35-3----637999988641797899186201
Q gi|254780349|r 185 SR-V----WDWERFRSIADSIGAYLMADISHI 211 (433)
Q Consensus 185 ~~-~----~d~~~l~eIa~~~ga~l~~D~aH~ 211 (433)
+. + ...+.+.++|.+.||-++.|.-|+
T Consensus 145 ~~~~~~~m~E~~FL~al~~~~~CglLLDvNNi 176 (282)
T COG3220 145 LHSPCSAMNEVEFLNALAREAGCGLLLDVNNI 176 (282)
T ss_pred CCCCCCCCCHHHHHHHHHHHCCCCEEEEECCE
T ss_conf 25665431379999999986299789961432
No 445
>cd05531 POLBc_B2 DNA polymerase type-B B2 subfamily catalytic domain. Archaeal proteins that are involved in DNA replication are similar to those from eukaryotes. Some archaeal members also possess multiple family B DNA polymerases (B1, B2 and B3). So far there is no specific function(s) has been assigned for different members of the archaea type B DNA polymerases. Phylogenetic analyses of eubacterial, archaeal, and eukaryotic family B DNA polymerases are support independent gene duplications during the evolution of archaeal and eukaryotic family B DNA polymerases.
Probab=43.68 E-value=25 Score=15.91 Aligned_cols=29 Identities=28% Similarity=0.616 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
Q ss_conf 99999988899999986168523345888981
Q gi|254780349|r 292 YAKQIVLNSQALAKKLQFLGFDIVSGGTDNHL 323 (433)
Q Consensus 292 Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~ 323 (433)
++++++..+..+++ +.|++|+.|-||+=.
T Consensus 130 ~GR~~l~~~~~~~e---~~g~~VIYGDTDSvf 158 (352)
T cd05531 130 YGRKILLRAKEIAE---EMGFRVLHGIVDSLW 158 (352)
T ss_pred HHHHHHHHHHHHHH---HCCCEEEEECCCEEE
T ss_conf 99999999999999---759889997375589
No 446
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE; InterPro: IPR014137 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain . The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyze ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarize the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site , , . The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis , , , , , . Proteins known to belong to this family are classified in several functional subfamilies depending on the substrate used (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase..
Probab=42.97 E-value=18 Score=16.79 Aligned_cols=32 Identities=31% Similarity=0.565 Sum_probs=22.6
Q ss_pred HHHHCCCEEEEE-------------------------CCCCCCC-CCHHHHHHHHHHC
Q ss_conf 986046678970-------------------------5524353-6379999886417
Q gi|254780349|r 169 AIEYNPKLIIVG-------------------------GTAYSRV-WDWERFRSIADSI 200 (433)
Q Consensus 169 a~~~kPklIi~G-------------------------~S~y~~~-~d~~~l~eIa~~~ 200 (433)
|...+|||||++ +.+|+|. +|++-...+|+++
T Consensus 165 ALA~~PkLivLDEavSnLD~~lQ~~iL~lL~~L~q~~G~aylfitHDL~lv~~f~~r~ 222 (267)
T TIGR02769 165 ALAVKPKLIVLDEAVSNLDLVLQAVILELLKKLQQEFGTAYLFITHDLRLVQKFCQRV 222 (267)
T ss_pred HHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHH
T ss_conf 9730897375322255767999999999999998700955413564799999998777
No 447
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase; InterPro: IPR006269 These sequences describe 2-dehydro-3-deoxyphosphooctonate aldolase. Alternate names include 3-deoxy-d-manno-octulosonic acid 8-phosphate and KDO-8 phosphate synthetase. It catalyzes the aldol condensation of phosphoenolpyruvate with D-arabinose 5-phosphate. phosphoenolpyruvate + D-arabinose 5-phosphate + H_2O = 2-dehydro-3-deoxy-D-octonate 8-phosphate + phosphate In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide. ; GO: 0008676 3-deoxy-8-phosphooctulonate synthase activity, 0008152 metabolic process, 0005737 cytoplasm.
Probab=41.62 E-value=27 Score=15.70 Aligned_cols=120 Identities=20% Similarity=0.349 Sum_probs=64.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHH--------HHCCCCEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 36006799999999999998718863010000167999999998--------3154874881233448411147665433
Q gi|254780349|r 71 YGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLA--------LMHPGDSFMGLSLDSGGHLTHGSSVNMS 142 (433)
Q Consensus 71 y~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~A--------Ll~pGD~Il~~~l~~GGHlshg~~~~~~ 142 (433)
|.|--.-+=++.| +..|+-||..=. .--|+-++|..++=-+ |++=-|-|.++. . -|+.+|+-
T Consensus 54 fRGpGle~GL~iL--~kvK~~fG~pi~-TDVHE~~q~~~vAeVvDilQiPAFLCRQTDLl~AaA--~-----TG~ivNvK 123 (279)
T TIGR01362 54 FRGPGLEEGLKIL--QKVKEEFGVPIL-TDVHESSQAEPVAEVVDILQIPAFLCRQTDLLVAAA--K-----TGKIVNVK 123 (279)
T ss_pred CCCCCHHHHHHHH--HHHHHHCCCCCC-CCCCCCHHHHHHCEEEEEECCCCHHHHHHHHHHHHH--H-----CCCEEEEC
T ss_conf 3688878999999--986565289702-354772102200413001106613211468999998--2-----39868605
Q ss_pred -CCCCCCCCCCCCCCCCCCCHHH-HHHHHHHHC-------------CCEEEEE-CCCCCCC---CCHHHHHHHHHHCC--
Q ss_conf -3332201366583235659899-999998604-------------6678970-5524353---63799998864179--
Q gi|254780349|r 143 -GKWFKAIPYNVRKEDGLLDMHE-IESLAIEYN-------------PKLIIVG-GTAYSRV---WDWERFRSIADSIG-- 201 (433)
Q Consensus 143 -g~~~~~~~y~~d~~~~~ID~d~-~~~~a~~~k-------------PklIi~G-~S~y~~~---~d~~~l~eIa~~~g-- 201 (433)
|.+. .|. ||.- ++|...--. +++++|. +++|... -|+.-| .|-++.|
T Consensus 124 KGQFL-------sP~----dM~nv~~K~~~~GnksiqsPtyetal~~~v~lcERG~~FGYnnLVvDmRsL-~iM~~~~kG 191 (279)
T TIGR01362 124 KGQFL-------SPW----DMKNVVEKVLKTGNKSIQSPTYETALKKNVLLCERGTSFGYNNLVVDMRSL-PIMRELGKG 191 (279)
T ss_pred CCCCC-------CHH----HHHHHHHHHHHCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCCCCHHHH-HHHHHHCCC
T ss_conf 88638-------712----115899999872786224751223304771586178888887531112455-899971699
Q ss_pred CEEEECCCCHH
Q ss_conf 78991862012
Q gi|254780349|r 202 AYLMADISHIS 212 (433)
Q Consensus 202 a~l~~D~aH~~ 212 (433)
+.+++|+.|..
T Consensus 192 ~PVvfDaTHSv 202 (279)
T TIGR01362 192 CPVVFDATHSV 202 (279)
T ss_pred CCEEEEECCCE
T ss_conf 73687301240
No 448
>PRK13118 consensus
Probab=40.45 E-value=28 Score=15.58 Aligned_cols=94 Identities=14% Similarity=0.297 Sum_probs=49.3
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC---C--CEEEEEC
Q ss_conf 9999999831548748812334484111476654333332201366583235659899999998604---6--6789705
Q gi|254780349|r 107 MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYN---P--KLIIVGG 181 (433)
Q Consensus 107 An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~k---P--klIi~G~ 181 (433)
...-++.+|.+-|--++-+-.+.-- +..-|-..+......- +++ ++++.+-+++++.| + .+|+.++
T Consensus 32 ~t~~~~~~l~~~GaDiiElGiPfSD-------P~ADGPvIq~A~~rAL-~~G-~~~~~~~~~v~~~r~~~~~~PivlM~Y 102 (269)
T PRK13118 32 ASVPLLHGLVAAGADVIELGMPFSD-------PMADGPAIQLASERAL-AAG-QGLADVLQMVREFRQGDQTTPVVLMGY 102 (269)
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCC-------CCCCCHHHHHHHHHHH-HCC-CCHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 9999999999769999997898888-------6665799999999999-679-868899999999864389999899740
Q ss_pred CCCCCCCCHHHHHHHHHHCC--CEEEECCC
Q ss_conf 52435363799998864179--78991862
Q gi|254780349|r 182 TAYSRVWDWERFRSIADSIG--AYLMADIS 209 (433)
Q Consensus 182 S~y~~~~d~~~l~eIa~~~g--a~l~~D~a 209 (433)
..-.+.+.+++|.+-|.+.| .+++.|.-
T Consensus 103 ~N~i~~~G~e~F~~~~~~~GvdGvIipDLP 132 (269)
T PRK13118 103 LNPIEIYGYERFVAQAKEAGVDGLILVDLP 132 (269)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCEEECCCCC
T ss_conf 007878639999999998599746458999
No 449
>COG1751 Uncharacterized conserved protein [Function unknown]
Probab=40.15 E-value=28 Score=15.54 Aligned_cols=140 Identities=23% Similarity=0.286 Sum_probs=74.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCC-EEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 36006799999999999998718863010000167999999998315487-48812334484111476654333332201
Q gi|254780349|r 71 YGGCQYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGD-SFMGLSLDSGGHLTHGSSVNMSGKWFKAI 149 (433)
Q Consensus 71 y~G~~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD-~Il~~~l~~GGHlshg~~~~~~g~~~~~~ 149 (433)
+.|-|..|+.-++|.+||++| +.++.-|-+-||..|..+.= +-+|| +|.++ .+
T Consensus 6 ~pG~eNT~~tle~a~erA~el-gik~~vVAS~tG~tA~k~le---mveg~lkvVvV----------------------th 59 (186)
T COG1751 6 KPGKENTDETLEIAVERAKEL-GIKHIVVASSTGYTALKALE---MVEGDLKVVVV----------------------TH 59 (186)
T ss_pred CCCCCCHHHHHHHHHHHHHHC-CCCEEEEEECCCHHHHHHHH---HCCCCCEEEEE----------------------EE
T ss_conf 776214699999999988744-86159998436578999998---44267359999----------------------83
Q ss_pred CCCCCCC-CCCCCHHHHHHHHHHHCCCEEEEECCCCC---CC--------CCHHHHHHHHH--HCCCEEEECCC---CHH
Q ss_conf 3665832-35659899999998604667897055243---53--------63799998864--17978991862---012
Q gi|254780349|r 150 PYNVRKE-DGLLDMHEIESLAIEYNPKLIIVGGTAYS---RV--------WDWERFRSIAD--SIGAYLMADIS---HIS 212 (433)
Q Consensus 150 ~y~~d~~-~~~ID~d~~~~~a~~~kPklIi~G~S~y~---~~--------~d~~~l~eIa~--~~ga~l~~D~a---H~~ 212 (433)
++++..+ +...| +++++..+ .|-.-|+-+..+++ |- .+++-+++.-+ ..|-.+-+.++ --+
T Consensus 60 h~Gf~e~g~~e~~-~E~~~~L~-erGa~v~~~sHalSg~eRsis~kfGG~~p~eiiAetLR~fg~G~KVcvEItiMAaDa 137 (186)
T COG1751 60 HAGFEEKGTQEMD-EEVRKELK-ERGAKVLTQSHALSGVERSISRKFGGYSPLEIIAETLRMFGQGVKVCVEITIMAADA 137 (186)
T ss_pred ECCCCCCCCEECC-HHHHHHHH-HCCCEEEEEHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCC
T ss_conf 2265568852058-99999999-708600430022200014445532782669999999998447747999999874267
Q ss_pred HHHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEEEE
Q ss_conf 443200012322002356740456522567448983
Q gi|254780349|r 213 GLVVGGQHPSPVPHCHIVTTTTHKSLRGPRGGLIMT 248 (433)
Q Consensus 213 GLIa~g~~~~Pl~~ADvvt~sTHKtl~GPrgGiI~~ 248 (433)
||| |..+-=|-.+.|- +|..-++++.
T Consensus 138 GlI-------p~~eeViAiGGt~---~GaDtAlVlk 163 (186)
T COG1751 138 GLI-------PVSEEVIAIGGTE---RGADTALVLK 163 (186)
T ss_pred CCC-------CCCEEEEEECCCC---CCCCEEEEEC
T ss_conf 876-------5530589964645---6773368971
No 450
>PRK12746 short chain dehydrogenase; Provisional
Probab=39.65 E-value=28 Score=15.49 Aligned_cols=29 Identities=24% Similarity=0.255 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCC--CC-CCCCCC
Q ss_conf 999988899999986168523--34-588898
Q gi|254780349|r 294 KQIVLNSQALAKKLQFLGFDI--VS-GGTDNH 322 (433)
Q Consensus 294 ~qvv~NA~~La~~L~~~G~~v--v~-ggTd~H 322 (433)
.-+..=+|.||.+|..+|++| |+ |.++|.
T Consensus 165 aal~~ltr~lA~e~a~~gIrVNaVaPG~i~T~ 196 (254)
T PRK12746 165 GALNTMTLPLAKHLGERGITVNTIMPGYTKTD 196 (254)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEEEECCCCCH
T ss_conf 99999999999996513989999878989863
No 451
>TIGR02485 CobZ_N-term precorrin 3B synthase CobZ; InterPro: IPR012831 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase . In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase . There are at least two distinct cobalamin biosynthetic pathways in bacteria : Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway ; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis ; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) . There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobZ, which is essential for cobalamin biosynthesis and is complemented by precorrin 3B synthase CobG (1.3.99.1 from EC). The enzyme has been shown to contain flavin, haem and Fe-S cluster cofactors, and is believed to require dioxygen as a substrate. In Rhodobacter capsulatus, CobZ is found as a N-terminal domain, whereas in other species it exists as a separate protein. The C-terminal portion is homologous to the 2-component signal transduction system protein CitB (IPR012830 from INTERPRO)..
Probab=39.03 E-value=18 Score=16.83 Aligned_cols=57 Identities=23% Similarity=0.291 Sum_probs=40.6
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHH-HHHCCEEEECCCCCCC
Q ss_conf 99999986168523345888981263166556767999998-8856718803789989
Q gi|254780349|r 301 QALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAESI-LGRVSITCNKNSIPFD 357 (433)
Q Consensus 301 ~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~-Le~~gI~~Nkn~iP~D 357 (433)
+-|...|.+.|=.-++.-|++|+|-||-|.--.||-.+.+. +=..||.||+..-=++
T Consensus 223 ~LL~~ll~d~Ga~aiGdPt~~HvVavDaRaP~~DgGIvtRid~~~lG~VV~r~G~Rf~ 280 (467)
T TIGR02485 223 RLLKLLLDDEGADAIGDPTDAHVVAVDARAPLYDGGIVTRIDSVSLGVVVDRDGERFA 280 (467)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECEEECCEEECCCCCCHH
T ss_conf 6899998541643037798730676568888457835744121211317889776124
No 452
>COG2987 HutU Urocanate hydratase [Amino acid transport and metabolism]
Probab=38.78 E-value=18 Score=16.87 Aligned_cols=57 Identities=18% Similarity=0.090 Sum_probs=33.6
Q ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC--CCCCCCCCEEEECCCCCCCCHHHHH
Q ss_conf 97356489999999988899999986168523--3458889812631665567679999
Q gi|254780349|r 283 EALSSEFRDYAKQIVLNSQALAKKLQFLGFDI--VSGGTDNHLMLVDLRSKRMTGKRAE 339 (433)
Q Consensus 283 Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~v--v~ggTd~H~vlvdl~~~~~~G~~a~ 339 (433)
|.....++.|.--++-||-.+-..|.++|+.+ +|.-|-+|-.+.---+.|.+-.++.
T Consensus 227 ~~~~~ag~p~SIgl~GNaaei~~~l~~r~~~pD~vtDQTsaHdp~~GY~P~G~s~ee~~ 285 (561)
T COG2987 227 EEATAAGEPISIGLLGNAAEILPELLRRGIRPDLVTDQTSAHDPLNGYLPVGYTVEEAD 285 (561)
T ss_pred HHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 99874489658987353999999999759987330366644674447588867788999
No 453
>PRK11145 pflA pyruvate formate lyase-activating enzyme 1; Provisional
Probab=38.57 E-value=29 Score=15.38 Aligned_cols=51 Identities=14% Similarity=0.114 Sum_probs=27.9
Q ss_pred CCCHHHHHHHHHHHCC-------CEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCC
Q ss_conf 6598999999986046-------67897055243536379999886417978991862
Q gi|254780349|r 159 LLDMHEIESLAIEYNP-------KLIIVGGTAYSRVWDWERFRSIADSIGAYLMADIS 209 (433)
Q Consensus 159 ~ID~d~~~~~a~~~kP-------klIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~a 209 (433)
.+..+++-+.+.+.+| .+.+-|+-...++-=..++.+.|++.|....+|-+
T Consensus 50 ~~t~~el~~~i~~~~~f~~~sgGGVT~SGGEPllq~ef~~~l~~~~k~~gi~taidTn 107 (246)
T PRK11145 50 EVTVEELMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTN 107 (246)
T ss_pred ECCHHHHHHHHHHHHHHHHHCCCEEEEECCCEECCHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 7559999999998799986059638986995126899999999999887998999899
No 454
>PRK06852 aldolase; Validated
Probab=38.46 E-value=30 Score=15.37 Aligned_cols=19 Identities=16% Similarity=0.238 Sum_probs=7.8
Q ss_pred HHHHHCCCCEEEECCCCCC
Q ss_conf 9983154874881233448
Q gi|254780349|r 112 FLALMHPGDSFMGLSLDSG 130 (433)
Q Consensus 112 ~~ALl~pGD~Il~~~l~~G 130 (433)
|...++--.+++.++.+||
T Consensus 23 ~~~~t~GTG~l~ILpvDQG 41 (303)
T PRK06852 23 YLEITRGTGRLMLFAGDQK 41 (303)
T ss_pred HHHHHCCCCCEEEECCCCC
T ss_conf 9998658772899616777
No 455
>PRK09192 acyl-CoA synthetase; Validated
Probab=38.33 E-value=30 Score=15.36 Aligned_cols=15 Identities=13% Similarity=0.113 Sum_probs=7.3
Q ss_pred CCCCCHHHHHHHHHH
Q ss_conf 556767999998885
Q gi|254780349|r 330 SKRMTGKRAESILGR 344 (433)
Q Consensus 330 ~~~~~G~~a~~~Le~ 344 (433)
..++...++|+.|.+
T Consensus 469 G~nI~p~EIE~~l~~ 483 (580)
T PRK09192 469 GRNIWPQDIEWIAEQ 483 (580)
T ss_pred CEEECHHHHHHHHHH
T ss_conf 999899999999986
No 456
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=38.13 E-value=26 Score=15.82 Aligned_cols=24 Identities=21% Similarity=0.416 Sum_probs=14.0
Q ss_pred HHHHHHCCCEEEECCCCHHHHHHH
Q ss_conf 988641797899186201244320
Q gi|254780349|r 194 RSIADSIGAYLMADISHISGLVVG 217 (433)
Q Consensus 194 ~eIa~~~ga~l~~D~aH~~GLIa~ 217 (433)
..++.-.||..+.........+.|
T Consensus 307 ~~l~~~~ga~~v~~~~d~t~~~~G 330 (524)
T COG0459 307 ERLAKLGGAKIVSVLKDLTTIVLG 330 (524)
T ss_pred HHHHHHCCCEEEEECCCCCCCCCC
T ss_conf 899972594488444777510046
No 457
>KOG0634 consensus
Probab=37.92 E-value=30 Score=15.31 Aligned_cols=308 Identities=16% Similarity=0.199 Sum_probs=159.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCC-C--EECCCHHHH-HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 3600679999999999999871886-3--010000167-99999999831548748812334484111476654333332
Q gi|254780349|r 71 YGGCQYVDDIENIAIERAKKLFNVN-F--VNVQSHSGS-QMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWF 146 (433)
Q Consensus 71 y~G~~~~d~iE~la~~~a~~lF~a~-~--anvqp~SG~-~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~ 146 (433)
||-|.-+-++-....+--+..|.+. + -++-..+|. .+..-++..++.+||.||.=....-+-|+ +......
T Consensus 96 Yg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~-----s~~a~gv 170 (472)
T KOG0634 96 YGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQ-----SMEALGV 170 (472)
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHH-----HCCCCCC
T ss_conf 45446848999999874623142777788438980687217899999851678826874034367887-----3310484
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHH--------CCCEEEE---EC----CCCCCCCCHHHHHHHHHHCCCEEEECCC--
Q ss_conf 20136658323565989999999860--------4667897---05----5243536379999886417978991862--
Q gi|254780349|r 147 KAIPYNVRKEDGLLDMHEIESLAIEY--------NPKLIIV---GG----TAYSRVWDWERFRSIADSIGAYLMADIS-- 209 (433)
Q Consensus 147 ~~~~y~~d~~~~~ID~d~~~~~a~~~--------kPklIi~---G~----S~y~~~~d~~~l~eIa~~~ga~l~~D~a-- 209 (433)
.++|.+.|.+ -||.+.++++...- +|++.++ |+ +.++ ..-=++|-++|+++.-+++-|--
T Consensus 171 ~~ipv~md~~--Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls-~errk~iy~LArKyDfLIVeDdpYy 247 (472)
T KOG0634 171 KIIPVKMDQD--GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLS-LERRKKIYQLARKYDFLIVEDDPYY 247 (472)
T ss_pred EEEECCCCCC--CCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCC-HHHHHHHHHHHHHCCEEEEECCCCC
T ss_conf 5774145678--988799998986488543468997079967688899887468-9999999999987678999247631
Q ss_pred -----------------CHHHHHHHHCCCCCCCC---CCEEE-ECCCCCC-CCCCCEEEEECCCCHHHHCCHHHCHHHHH
Q ss_conf -----------------01244320001232200---23567-4045652-25674489833620565016646543223
Q gi|254780349|r 210 -----------------HISGLVVGGQHPSPVPH---CHIVT-TTTHKSL-RGPRGGLIMTNHADLAKKINSAIFPGLQG 267 (433)
Q Consensus 210 -----------------H~~GLIa~g~~~~Pl~~---ADvvt-~sTHKtl-~GPrgGiI~~~~~e~~~~i~~avfPg~qg 267 (433)
|..--.--.+.|+++.. ..|+- .|.-|-+ ||-|=|.|-.+..-+..-++.+-+- ++|
T Consensus 248 ~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~~ae~~-t~~ 326 (472)
T KOG0634 248 FLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKRILDLAEVA-TSG 326 (472)
T ss_pred EEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHCCCCEEEEEECCHHHHHHHHHHCCEE-ECC
T ss_conf 2433666887664675524788988644773236666617863412444167631578635777888886120310-038
Q ss_pred ------H---HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCC------CCC
Q ss_conf ------4---4556668999999997356489999999988899999986168523345888981263166------556
Q gi|254780349|r 268 ------G---PFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLR------SKR 332 (433)
Q Consensus 268 ------~---~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~------~~~ 332 (433)
+ ..+++-++. .+.+-+..-...|..|--.--.||-+.|-..-+.+.. -+.---+||.+. +++
T Consensus 327 pSg~sq~iv~a~l~~wgqe--G~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~-P~aGmFiwv~i~~~~~~~~~~ 403 (472)
T KOG0634 327 PSGFSQGIVYAMLKRWGQE--GFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHP-PKAGMFIWVEIPYINFDTKKS 403 (472)
T ss_pred CCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC-CCCCEEEEEEECCCCCCCCCC
T ss_conf 6641099999999998888--8999999999999888999999999758777069866-876469999926643465566
Q ss_pred CCHHHHHH----HHHHCCEEE-ECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 76799999----888567188-037899899998889851224666730799989999999999999602
Q gi|254780349|r 333 MTGKRAES----ILGRVSITC-NKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILDG 397 (433)
Q Consensus 333 ~~G~~a~~----~Le~~gI~~-Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~~ 397 (433)
++ ++++ .+.+.|+.+ --+..--||++.+..--.|+.-+. ...+++.+=.+.+..+++.
T Consensus 404 i~--q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~-----a~~e~l~~g~~rf~~~ike 466 (472)
T KOG0634 404 IN--QIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAF-----AEPEKLDEGIERFGSVIKE 466 (472)
T ss_pred HH--HHHHHHHHHHHHCCEEEECCCEEEECCCCCCCCCEEEEEEEC-----CCHHHHHHHHHHHHHHHHH
T ss_conf 67--999999999997791893374368767657775259999620-----8988999999999999998
No 458
>COG2895 CysN GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism]
Probab=37.81 E-value=23 Score=16.08 Aligned_cols=102 Identities=19% Similarity=0.346 Sum_probs=69.2
Q ss_pred HHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH--H
Q ss_conf 69785899999999999999838881043010298999983051028865798887533600679999999999999--8
Q gi|254780349|r 13 SLIESDPDVFSLIGQESCRQNDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAK--K 90 (433)
Q Consensus 13 ~l~~~Dpei~~~i~~e~~rq~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~--~ 90 (433)
-|...|.++|+.|..+...-...|.+-.. -+++-++ ..|-....+ ++ ...+|.|-...+.+|..-++... +
T Consensus 150 DLvdy~e~~F~~I~~dy~~fa~~L~~~~~-~~IPiSA--l~GDNV~~~-s~---~mpWY~GptLLe~LE~v~i~~~~~~~ 222 (431)
T COG2895 150 DLVDYSEEVFEAIVADYLAFAAQLGLKDV-RFIPISA--LLGDNVVSK-SE---NMPWYKGPTLLEILETVEIADDRSAK 222 (431)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCC-EEEECHH--HCCCCCCCC-CC---CCCCCCCCCHHHHHHHCCCCCCCCCC
T ss_conf 12356789999999999999997699852-4774323--048753346-56---78864685099997412234554366
Q ss_pred HCCCC--CE-----ECCCHHHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 71886--30-----10000167999999998315487488123
Q gi|254780349|r 91 LFNVN--FV-----NVQSHSGSQMNQGVFLALMHPGDSFMGLS 126 (433)
Q Consensus 91 lF~a~--~a-----nvqp~SG~~An~av~~ALl~pGD~Il~~~ 126 (433)
.|... |+ +.|-++|+.|. +-+++||+|..++
T Consensus 223 ~~RfPVQ~V~Rp~~dfRGyaGtias-----G~v~~Gd~vvvlP 260 (431)
T COG2895 223 AFRFPVQYVNRPNLDFRGYAGTIAS-----GSVKVGDEVVVLP 260 (431)
T ss_pred CEEECEEEECCCCCCCCCCCEEEEC-----CCEECCCEEEECC
T ss_conf 5010228861789762100304403-----5140597489945
No 459
>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional
Probab=37.78 E-value=30 Score=15.30 Aligned_cols=115 Identities=18% Similarity=0.185 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC
Q ss_conf 16799999999831548748812334484111476654333332-20136658323565989999999860466789705
Q gi|254780349|r 103 SGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWF-KAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVGG 181 (433)
Q Consensus 103 SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~-~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G~ 181 (433)
|-+.+|+++-+| +-|-+||-..-+- -|-+...+.|+.. .++.+ +...+..-+--.+++.+.+ ..+-|.|=-
T Consensus 16 STttaNlsaALA--~~GkkV~~IgcDP----k~DsT~~L~g~~~~tild~-l~~~~~~~~~~~~ed~~~~-G~~gv~cvE 87 (269)
T PRK13185 16 STTSSNLSAALA--KLGKKVLQIGCDP----KHDSTFTLTGKLVPTVIDI-LEEVDFHSEELRPEDFVFE-GYNGVDCVE 87 (269)
T ss_pred HHHHHHHHHHHH--HCCCEEEEECCCC----CCCCHHHCCCCCCCCHHHH-HHHCCCCHHHCCHHHHHHC-CCCCCEEEE
T ss_conf 889999999999--7699389981899----7323011259987878999-9743876021256677633-767705664
Q ss_pred CCCCC----------CCCHHHHHHH--HHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCE
Q ss_conf 52435----------3637999988--641797899186201244320001232200235
Q gi|254780349|r 182 TAYSR----------VWDWERFRSI--ADSIGAYLMADISHISGLVVGGQHPSPVPHCHI 229 (433)
Q Consensus 182 S~y~~----------~~d~~~l~eI--a~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADv 229 (433)
|--|- ..-++.+.+. -++. -+++|| ++|=|..|-|..|+.+||-
T Consensus 88 aGGP~pG~GCaGrgi~~~~~~L~~~~~~~~~-D~Vl~D---vlgdVvCGGFa~Pi~~Ad~ 143 (269)
T PRK13185 88 AGGPPAGTGCGGYVVGETVKLLKEHHLLDDY-DVILFD---VLGDVVCGGFAAPLQYADY 143 (269)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC-CEEEEE---CCCCCCCCCCCCCHHCCCE
T ss_conf 3899998776764318999999872874337-879995---3674333655575100888
No 460
>PRK00912 ribonuclease P protein component 3; Provisional
Probab=37.76 E-value=30 Score=15.30 Aligned_cols=72 Identities=15% Similarity=0.158 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCEEEECC-------CCCCCCHHHHHHHHHHC--CEEEECCCCCCCCCCCC
Q ss_conf 9999988899999986168523-34588898126316-------65567679999988856--71880378998999988
Q gi|254780349|r 293 AKQIVLNSQALAKKLQFLGFDI-VSGGTDNHLMLVDL-------RSKRMTGKRAESILGRV--SITCNKNSIPFDPESPF 362 (433)
Q Consensus 293 a~qvv~NA~~La~~L~~~G~~v-v~ggTd~H~vlvdl-------~~~~~~G~~a~~~Le~~--gI~~Nkn~iP~D~~~~~ 362 (433)
-++++.|++.+.+.-.++|+++ ++-++.+|+=+-.. ...|++-.++.+.|... .|+.+ | ..+..+
T Consensus 152 R~~~i~n~~~l~~l~r~yg~pivisS~A~s~ldlR~p~d~~~l~~~~Gl~~~~a~~als~~p~~il~~-~----r~r~~~ 226 (237)
T PRK00912 152 RARTLSQIRANLALHRKYDFPLVLSSGAMSCYDLRSPKEMIALAEVFGLEEDEALEALTSVPEKIIEK-N----RNRKNY 226 (237)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH-C----CCCCCC
T ss_conf 89999879999999986699889967999844417999999999985999999999999989999984-5----777764
Q ss_pred CCCCCCC
Q ss_conf 8985122
Q gi|254780349|r 363 ITSGIRL 369 (433)
Q Consensus 363 ~~sGiRl 369 (433)
+-.|+|+
T Consensus 227 i~~gv~~ 233 (237)
T PRK00912 227 VIEGVEI 233 (237)
T ss_pred CCCCEEE
T ss_conf 4666160
No 461
>PRK10736 hypothetical protein; Provisional
Probab=37.69 E-value=30 Score=15.29 Aligned_cols=63 Identities=17% Similarity=0.288 Sum_probs=29.9
Q ss_pred HHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCE----------EEECCCCCCCCCCCEEEEECCCCHHHHCC
Q ss_conf 99988641797899186201244320001232200-235----------67404565225674489833620565016
Q gi|254780349|r 192 RFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHI----------VTTTTHKSLRGPRGGLIMTNHADLAKKIN 258 (433)
Q Consensus 192 ~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADv----------vt~sTHKtl~GPrgGiI~~~~~e~~~~i~ 258 (433)
|=|-|+---.+.+++.++.-+|=...-.+. +++ -|| ....+|.-++ +|+.++++-+|+.+.+.
T Consensus 201 RNRIIsgLS~~vlVVEA~~rSGsLiTAr~A--leqgReVfAvPG~i~~~~s~Gc~~LI~--~GA~LV~s~~DIle~L~ 274 (364)
T PRK10736 201 RNRIISGLSKGVLVVEAALRSGSLVTARCA--LEQGRDVFALPGPIGNPGSEGPHWLIK--QGAYLVTEPEDILENLQ 274 (364)
T ss_pred HHHHHHHHCCCEEEEECCCCCCHHHHHHHH--HHCCCEEEEECCCCCCCCCHHHHHHHH--CCCEEECCHHHHHHHHH
T ss_conf 533998836827999658887569999999--984995999689998856868999998--79989888999999850
No 462
>COG4475 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=37.67 E-value=30 Score=15.29 Aligned_cols=55 Identities=29% Similarity=0.625 Sum_probs=36.6
Q ss_pred CCCCCHHHHHHHHHHHHH-HHHHCCCCCEEC--CCHHHHHHHHHHHHHHHCC--------------CCEEEECC
Q ss_conf 336006799999999999-998718863010--0001679999999983154--------------87488123
Q gi|254780349|r 70 YYGGCQYVDDIENIAIER-AKKLFNVNFVNV--QSHSGSQMNQGVFLALMHP--------------GDSFMGLS 126 (433)
Q Consensus 70 yy~G~~~~d~iE~la~~~-a~~lF~a~~anv--qp~SG~~An~av~~ALl~p--------------GD~Il~~~ 126 (433)
-++|||++.+.-. +|| ..+.|+.+-++| ++|-|-...+++|.-+-.| |||.++|.
T Consensus 69 A~Q~CEHlNRAlv--vEr~~ae~~~~e~VsvvP~~hAGGs~a~~Afq~mkdPV~VE~I~a~aGiDIGdT~IGMH 140 (180)
T COG4475 69 AFQGCEHLNRALV--VEREVAEPFGLEIVSVVPVLHAGGSMATYAFQQMKDPVEVEHITADAGIDIGDTFIGMH 140 (180)
T ss_pred EEEHHHHHHHHHH--HHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEE
T ss_conf 8501666536762--20855330587068864045667378899998708985899985047865330001103
No 463
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=37.59 E-value=31 Score=15.28 Aligned_cols=58 Identities=19% Similarity=0.257 Sum_probs=37.8
Q ss_pred CCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCC--CEEEECCCCHHHHHHHHCCCCCCCC
Q ss_conf 6598999999986046678970552435363799998864179--7899186201244320001232200
Q gi|254780349|r 159 LLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIG--AYLMADISHISGLVVGGQHPSPVPH 226 (433)
Q Consensus 159 ~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~g--a~l~~D~aH~~GLIa~g~~~~Pl~~ 226 (433)
..-.+++-+.+++.+|.+|-+.....+....++.+.++.++.+ ..++ .||.+++..++
T Consensus 36 ~~~~e~~v~~~~~~~~dvVgiS~~~~~~~~~~~~~~~~~~~~~~~v~vv----------~GG~~~t~~~~ 95 (125)
T cd02065 36 DVPPEEIVEAAKEEDADVVGLSALSTTHMEAMKLVIEALKELGIDIPVV----------VGGAHPTADPE 95 (125)
T ss_pred CCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEE----------ECCCCCCCCHH
T ss_conf 8899999999986089999985211301899999999999679987599----------75887986735
No 464
>TIGR00624 tag DNA-3-methyladenine glycosylase I; InterPro: IPR004597 One common form of damage to DNA occurs when alkyl groups become covalently linked to DNA, leading to the formation of mutagenic or toxic lesions. Alkylating agents are ubiquitous in the environment and can also exist endogenously; for example S-adenosylmethionine, a commonly used methyl donor in many cellualr pathways, can produce methylation damage. Given the prevalence of alkylating agents it is not surprising that all cellular organisms studied so far have developed repair systems to deal with DNA alkylation . DNA-3-methyladenine glycosylase I (also known as TagI) is part of the broader helix-hairpin-helix DNA repair glycosylase supefamily. It specifically catalyses the release of 3-methylated adenine and, to a lesser extent, guanosine bases from DNA by hydrolysis of the deoxyribose N-glycosidic bond , . A phylogenomic study suggests that TagI evolved in, and is specific to, the bacteria .; GO: 0008725 DNA-3-methyladenine glycosylase I activity, 0006284 base-excision repair.
Probab=37.34 E-value=21 Score=16.38 Aligned_cols=17 Identities=35% Similarity=0.626 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHCCCCCC
Q ss_conf 88999999861685233
Q gi|254780349|r 299 NSQALAKKLQFLGFDIV 315 (433)
Q Consensus 299 NA~~La~~L~~~G~~vv 315 (433)
.|+||+++|+.+||+-|
T Consensus 144 ea~Amsk~LKkrGF~FV 160 (185)
T TIGR00624 144 EAKAMSKELKKRGFRFV 160 (185)
T ss_pred HHHHHHHHHHHCCCCCC
T ss_conf 78999999875688300
No 465
>cd03067 PDI_b_PDIR_N PDIb family, PDIR subfamily, N-terminal TRX-like b domain; composed of proteins similar to human PDIR (for Protein Disulfide Isomerase Related). PDIR is composed of three redox active TRX (a) domains and an N-terminal redox inactive TRX-like (b) domain. Similar to PDI, it is involved in oxidative protein folding in the endoplasmic reticulum (ER) through its isomerase and chaperone activities. These activities are lower compared to PDI, probably due to PDIR acting only on a subset of proteins. PDIR is preferentially expressed in cells actively secreting proteins and its expression is induced by stress. Similar to PDI, the isomerase and chaperone activities of PDIR are independent; CXXC mutants lacking isomerase activity retain chaperone activity. The TRX-like b domain of PDIR is critical for its chaperone activity.
Probab=36.46 E-value=32 Score=15.16 Aligned_cols=53 Identities=17% Similarity=0.166 Sum_probs=39.9
Q ss_pred CCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHC---CCEEEECCCCHH
Q ss_conf 59899999998604667897055243536379999886417---978991862012
Q gi|254780349|r 160 LDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSI---GAYLMADISHIS 212 (433)
Q Consensus 160 ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~---ga~l~~D~aH~~ 212 (433)
.|+-++.+++|-.+-=||..-.|.-.-.-.++-|+++|+.+ |.+.++|++.--
T Consensus 7 ~d~KdfKKLLRT~~NVLvLy~~s~k~a~~~Lk~~~~~A~~ikG~GT~~~vDC~d~e 62 (112)
T cd03067 7 SDHKDFKKLLRTRNNVLVLYSKSAKSAEALLKLLSDVAQAVKGQGTIAWIDCGDSE 62 (112)
T ss_pred CCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCH
T ss_conf 45789999981157479999558778788999999999984472169999737607
No 466
>TIGR02545 ATP_syn_fliI flagellar protein export ATPase FliI; InterPro: IPR013379 FliI proteins are involved in bacterial flagellum systems, acting to drive protein export for flagellar biosynthesis. The most closely related proteins are the YscN proteins of bacterial type III secretion systems.; GO: 0016887 ATPase activity, 0001539 ciliary or flagellar motility, 0009296 flagellum biogenesis, 0009288 flagellin-based flagellum.
Probab=36.27 E-value=32 Score=15.14 Aligned_cols=61 Identities=26% Similarity=0.431 Sum_probs=35.9
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCC
Q ss_conf 89999998616852334588898126316655676799999888567188037899899998889851224666730799
Q gi|254780349|r 300 SQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGF 379 (433)
Q Consensus 300 A~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~ 379 (433)
|-+.|+.|.++|-+| ++++|- +| .++.+-.+.|...- +|| ||||+
T Consensus 236 A~~iAEYFRDqGk~V--------LL~~DS----lT--RFAmAqREigLa~G--------EPP-------------~tkGY 280 (439)
T TIGR02545 236 ATAIAEYFRDQGKDV--------LLLMDS----LT--RFAMAQREIGLAAG--------EPP-------------TTKGY 280 (439)
T ss_pred HHHHHHHHHHCCCCE--------EEEECH----HH--HHHHHHHHHHHHCC--------CCC-------------CCCCC
T ss_conf 999999998649834--------776211----78--89989889998717--------876-------------66789
Q ss_pred CHHHHHHHHHHHHHHH
Q ss_conf 9899999999999996
Q gi|254780349|r 380 KEKDFEYIGELIAQIL 395 (433)
Q Consensus 380 ~e~em~~iA~li~~~L 395 (433)
.+.=|.+|++|+-|+=
T Consensus 281 pPSVF~~Lp~L~ERaG 296 (439)
T TIGR02545 281 PPSVFSELPRLLERAG 296 (439)
T ss_pred CCHHHHHHHHHHHHHC
T ss_conf 7048999999998708
No 467
>cd05530 POLBc_B1 DNA polymerase type-B B1 subfamily catalytic domain. Archaeal proteins that are involved in DNA replication are similar to those from eukaryotes. Some archaeal members also possess multiple family B DNA polymerases (B1, B2 and B3). So far there is no specific function(s) has been assigned for different members of the archaea type B DNA polymerases. Phylogenetic analyses of eubacterial, archaeal, and eukaryotic family B DNA polymerases are support independent gene duplications during the evolution of archaeal and eukaryotic family B DNA polymerases.
Probab=36.22 E-value=32 Score=15.13 Aligned_cols=14 Identities=14% Similarity=0.173 Sum_probs=7.8
Q ss_pred HHHHHHHHCCEEEE
Q ss_conf 99998885671880
Q gi|254780349|r 337 RAESILGRVSITCN 350 (433)
Q Consensus 337 ~a~~~Le~~gI~~N 350 (433)
+++++|.+.|..++
T Consensus 313 ~~A~~l~~~G~~v~ 326 (372)
T cd05530 313 KAARQLEKYGRNVE 326 (372)
T ss_pred HHHHHHHHCCCCCC
T ss_conf 99999995799999
No 468
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=36.07 E-value=18 Score=16.86 Aligned_cols=80 Identities=30% Similarity=0.330 Sum_probs=42.3
Q ss_pred CE-EEECCCCCCCCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHH-------HHHCHHHHHHHHHHHHH
Q ss_conf 35-67404565225674489833620565016646543223445566689999999-------97356489999999988
Q gi|254780349|r 228 HI-VTTTTHKSLRGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFG-------EALSSEFRDYAKQIVLN 299 (433)
Q Consensus 228 Dv-vt~sTHKtl~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~-------Ea~~~~f~~Ya~qvv~N 299 (433)
|| +.+.|--+|-|-.|= ++|++++|.++. +- |-.-.-.|.--+|. -.++| |. .+-
T Consensus 69 dvI~Y~CtsgS~i~G~~~-----d~ei~~~ie~~~-~v----~vvTts~Avv~aL~al~a~ri~vlTP----Y~---~ev 131 (238)
T COG3473 69 DVIVYGCTSGSLIGGPGY-----DKEIAQRIEEAK-GV----PVVTTSTAVVEALNALGAQRISVLTP----YI---DEV 131 (238)
T ss_pred CEEEEECCCEEEECCCCH-----HHHHHHHHHHCC-CC----CEEECHHHHHHHHHHHCCCEEEEECC----CH---HHH
T ss_conf 789996262016427745-----599999998626-98----55614089999998617515898525----30---544
Q ss_pred HHHHHHHHHHCCCCCCC----CCCCCCEE
Q ss_conf 89999998616852334----58889812
Q gi|254780349|r 300 SQALAKKLQFLGFDIVS----GGTDNHLM 324 (433)
Q Consensus 300 A~~La~~L~~~G~~vv~----ggTd~H~v 324 (433)
.|...+.|.++||.|+. |-+||--+
T Consensus 132 n~~e~ef~~~~Gfeiv~~~~Lgi~dn~ei 160 (238)
T COG3473 132 NQREIEFLEANGFEIVDFKGLGITDNLEI 160 (238)
T ss_pred HHHHHHHHHHCCEEEEEEECCCCCCCCHH
T ss_conf 15899999848927997541577665001
No 469
>cd01130 VirB11-like_ATPase Type IV secretory pathway component VirB11, and related ATPases. The homohexamer, VirB11 is one of eleven Vir proteins, which are required for T-pilus biogenesis and virulence in the transfer of T-DNA from the Ti (tumor-inducing) plasmid of bacterial to plant cells. The pilus is a fibrous cell surface organelle, which mediates adhesion between bacteria during conjugative transfer or between bacteria and host eukaryotic cells during infection. VirB11- related ATPases include the archaeal flagella biosynthesis protein and the pilus assembly proteins CpaF/TadA and TrbB. This alignment contains the C-terminal domain, which is the ATPase.
Probab=36.01 E-value=32 Score=15.11 Aligned_cols=76 Identities=21% Similarity=0.289 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf 00167999999998315487488123344841114766543333322013665832356598999999986046678970
Q gi|254780349|r 101 SHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNPKLIIVG 180 (433)
Q Consensus 101 p~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kPklIi~G 180 (433)
+-||-..-+.++...+.|.++|+.+..+.==.+-|. ++....++. ......+.+++.++-+.+.+.+|..|++|
T Consensus 34 tGSGKTTll~al~~~i~~~~rivtiEd~~El~l~~~---~~v~l~~~~---~~~~~~~~~~~~~li~~aLR~~pd~iivG 107 (186)
T cd01130 34 TGSGKTTLLNALLAFIPPDERIITIEDTAELQLPHP---NWVRLVTRP---GNVEGSGEVTMADLLRSALRMRPDRIIVG 107 (186)
T ss_pred CCCCHHHHHHHHHHHCCCCCCEEEECCCHHHCCCCC---CEEEEEEEC---CCCCCCCEECHHHHHHHHCCCCCCEEECC
T ss_conf 999899999999961334564598415354047777---568888604---64578650349999887366899737317
Q ss_pred CC
Q ss_conf 55
Q gi|254780349|r 181 GT 182 (433)
Q Consensus 181 ~S 182 (433)
--
T Consensus 108 Ei 109 (186)
T cd01130 108 EV 109 (186)
T ss_pred CC
T ss_conf 56
No 470
>COG0417 PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair]
Probab=35.94 E-value=32 Score=15.10 Aligned_cols=59 Identities=15% Similarity=0.321 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC---CCCCHHHHHHHHHH---CCEEE
Q ss_conf 4899999999888999999861685233458889812631665---56767999998885---67188
Q gi|254780349|r 288 EFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRS---KRMTGKRAESILGR---VSITC 349 (433)
Q Consensus 288 ~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~---~~~~G~~a~~~Le~---~gI~~ 349 (433)
.-.+++++++.+|+.+++++ |+.|+.|-||+=.|+.+... ..-.|.+..+..++ .+|.+
T Consensus 534 ~VT~~gR~ii~~t~~~ae~~---G~~ViyGDTDSlfv~~~~~~~~ea~~~~~~l~~~vn~~~~~~i~l 598 (792)
T COG0417 534 SVTAFGREILRETKELAEEM---GLRVIYGDTDSLFVTLPGATYEEAIKIGEELVEEVNERLPSGIEL 598 (792)
T ss_pred HHHHHHHHHHHHHHHHHHHC---CCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 99999999999999999975---987999847626996487511767777999999998558886699
No 471
>COG1959 Predicted transcriptional regulator [Transcription]
Probab=35.92 E-value=32 Score=15.10 Aligned_cols=25 Identities=28% Similarity=0.527 Sum_probs=18.1
Q ss_pred CCCCCCEEEECCCCCCCCCCCEEEEECCCC
Q ss_conf 220023567404565225674489833620
Q gi|254780349|r 223 PVPHCHIVTTTTHKSLRGPRGGLIMTNHAD 252 (433)
Q Consensus 223 Pl~~ADvvt~sTHKtl~GPrgGiI~~~~~e 252 (433)
+|..+.+| ||.|||.||..+.++++
T Consensus 48 ~L~kaGlV-----~S~rG~~GGy~Lar~~~ 72 (150)
T COG1959 48 KLRKAGLV-----KSVRGKGGGYRLARPPE 72 (150)
T ss_pred HHHHCCCE-----EEECCCCCCEECCCCHH
T ss_conf 99877987-----85207998920238979
No 472
>TIGR02787 codY_Gpos GTP-sensing transcriptional pleiotropic repressor CodY; InterPro: IPR014154 This entry represents pleiotropic repressors in Bacillus subtilis, CodY, and other Firmicutes (low-GC Gram-positive bacteria) that respond to intracellular levels of GTP and branched chain amino acids. All have a C-terminal helix-turn-helix DNA-binding region..
Probab=35.70 E-value=32 Score=15.16 Aligned_cols=34 Identities=15% Similarity=0.198 Sum_probs=15.7
Q ss_pred CCCCCCEEEECCCCC-CCCHHH---HHHHHHHCCEEEE
Q ss_conf 588898126316655-676799---9998885671880
Q gi|254780349|r 317 GGTDNHLMLVDLRSK-RMTGKR---AESILGRVSITCN 350 (433)
Q Consensus 317 ggTd~H~vlvdl~~~-~~~G~~---a~~~Le~~gI~~N 350 (433)
.|-|-|+|.=...++ |+|=.. |=++||.||||=.
T Consensus 197 dG~EG~LvAS~IAD~vGITRSVIVNALRKlESAGvIES 234 (255)
T TIGR02787 197 DGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIES 234 (255)
T ss_pred CCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEC
T ss_conf 89966277530207126603355454344420764130
No 473
>KOG1486 consensus
Probab=35.67 E-value=33 Score=15.08 Aligned_cols=10 Identities=20% Similarity=0.355 Sum_probs=3.9
Q ss_pred HHHHHHHCCE
Q ss_conf 9998885671
Q gi|254780349|r 338 AESILGRVSI 347 (433)
Q Consensus 338 a~~~Le~~gI 347 (433)
.|+.-|..+.
T Consensus 280 le~iWe~l~L 289 (364)
T KOG1486 280 LERIWEELNL 289 (364)
T ss_pred HHHHHHHHCE
T ss_conf 9999987410
No 474
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein; InterPro: IPR013366 Salmonella typhimurium is capable of growth on ethanolamine as a sole source of carbon nitrogen and energy . During growth on this compound the cells form a multimolecular structure known as a metabolosome, which is similar to the carboxysome used by some photosynthetic bacteria to fix CO2, and is thought to contain the enzymes needed to metabolise this compound to acetyl-CoA. The metabolosome is not directly involved in the biochemistry of ethanolamine utilization - instead its role is thought to be to concentrate the enzymes involved in this process, while also protecting the cell from the build-up of toxic intermediates . The genes involved in growth on ethanolamine are encoded in a 17-gene operon known as the ethanolamine utilization (eut) operon. EutJ shows similarity to chaperonins and may play a role in assembly of the metabolosme , though it is not necessary for growth on this compound..
Probab=35.43 E-value=33 Score=15.05 Aligned_cols=66 Identities=15% Similarity=0.226 Sum_probs=41.2
Q ss_pred HHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC-CEEEEECCCCCCCCCHHH
Q ss_conf 8315487488123344841114766543333322013665832356598999999986046-678970552435363799
Q gi|254780349|r 114 ALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNP-KLIIVGGTAYSRVWDWER 192 (433)
Q Consensus 114 ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kP-klIi~G~S~y~~~~d~~~ 192 (433)
|.+|.|+-|-+-|.+-||| |-+- .+.| .+.|++++.|+.-+..|- +=|+. .-+|. +++
T Consensus 123 SI~K~GKViy~ADEpTGGt--Hm~L-V~AG-------------~ygi~~EEAEe~K~~~k~e~E~F~----~v~PV-~qK 181 (240)
T TIGR02529 123 SILKKGKVIYSADEPTGGT--HMSL-VLAG-------------AYGISFEEAEEIKRDKKKEEEVFS----VVKPV-VQK 181 (240)
T ss_pred EEEECCCEEEEEECCCCCC--CEEE-EEEE-------------CCCCCHHHHHHHHHCCCCCEEEEE----EECCH-HHH
T ss_conf 7997596899823799986--1567-8861-------------268888898878630588437887----60413-777
Q ss_pred HHHHHHHC
Q ss_conf 99886417
Q gi|254780349|r 193 FRSIADSI 200 (433)
Q Consensus 193 l~eIa~~~ 200 (433)
|++|.+.+
T Consensus 182 mA~Iv~~h 189 (240)
T TIGR02529 182 MASIVKKH 189 (240)
T ss_pred HHHHHHHH
T ss_conf 89999998
No 475
>TIGR02733 desat_CrtD C-3',4' desaturase CrtD; InterPro: IPR014104 Members of this family are encoded by slr1293, a carotenoid biosynthesis protein which was shown to be the C-3',4' desaturase (CrtD) of myxoxanthophyll biosynthesis in Synechocystis sp. (strain PCC 6803), and close homologues (presumed to be functionally equivalent) from other cyanobacteria, where myxoxanthophyll biosynthesis is either known or expected. This enzyme can act on neurosporene and so presumably catalyses the first step that is committed to myxoxanthophyll..
Probab=35.14 E-value=13 Score=17.77 Aligned_cols=15 Identities=20% Similarity=0.676 Sum_probs=6.9
Q ss_pred HHHHHHHHCCCEEEE
Q ss_conf 999886417978991
Q gi|254780349|r 192 RFRSIADSIGAYLMA 206 (433)
Q Consensus 192 ~l~eIa~~~ga~l~~ 206 (433)
|+.++-+--||+++|
T Consensus 312 Rl~~LP~pSGA~V~Y 326 (499)
T TIGR02733 312 RLKKLPEPSGAFVLY 326 (499)
T ss_pred HHHHCCCCCCEEEEE
T ss_conf 997277889728860
No 476
>pfam07454 SpoIIP Stage II sporulation protein P (SpoIIP). This family contains the bacterial stage II sporulation protein P (SpoIIP) (approximately 350 residues long). It has been shown that a block in polar cytokinesis in Bacillus subtilis is mediated partly by transcription of spoIID, spoIIM and spoIIP. This inhibition of polar division is involved in the locking in of asymmetry after the formation of a polar septum during sporulation. Engulfment in Bacillus subtilis is mediated by two complementary systems: the first includes the proteins SpoIID, SpoIIM and SpoIIP (DMP) which carry out the engulfment, and the second includes the SpoIIQ-SpoIIIAGH (Q-AH) zipper, that recruits other proteins to the septum in a second-phase of the engulfment. The course of events follows as the incorporation firstly of SpoIIB into the septum during division to serve directly or indirectly as a landmark for localising SpoIIM and then SpoIIP and SpoIID to the septum. SpoIIP and SpoIID interact together to
Probab=34.92 E-value=29 Score=15.39 Aligned_cols=61 Identities=20% Similarity=0.270 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCC-----EEEECCCCCC
Q ss_conf 9998889999998616852334588898126316655676799999888567-----1880378998
Q gi|254780349|r 295 QIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKRMTGKRAESILGRVS-----ITCNKNSIPF 356 (433)
Q Consensus 295 qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~g-----I~~Nkn~iP~ 356 (433)
.|+.=...|++.|.++|+.|+...| .|-..-+-.+...+...+.+.|++.. |-+-|.++|.
T Consensus 98 nV~~VG~~L~~~Le~~Gi~vihd~t-~hd~~~y~~sY~~Sr~tv~~~L~~~p~i~~viDiHRD~~~~ 163 (258)
T pfam07454 98 NVVKVGDRLAQELEKYGIGVIHDKT-VHDLPDYNQSYKRSRETVKKLLKENPDIKAVIDIHRDSVPD 163 (258)
T ss_pred CEEEHHHHHHHHHHHCCCCEEEECC-CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
T ss_conf 0772899999999977983696187-67774558899999999999998889925999814689987
No 477
>pfam11794 HpaB_N 4-hydroxyphenylacetate 3-hydroxylase N terminal. HpaB encodes part of the 4-hydroxyphenylacetate 3-hydroxylase from Escherichia coli. HpaB is part of a heterodimeric enzyme that also requires HpaC. The enzyme is NADH-dependent and uses FAD as the redox chromophore. This family also includes PvcC, which may play a role in one of the proposed hydroxylation steps of pyoverdine chromophore biosynthesis.
Probab=34.53 E-value=34 Score=14.95 Aligned_cols=129 Identities=17% Similarity=0.141 Sum_probs=65.8
Q ss_pred HHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCE
Q ss_conf 99999860466789705524353637999988641797899186201244320001232200235674045652256744
Q gi|254780349|r 165 IESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHIVTTTTHKSLRGPRGG 244 (433)
Q Consensus 165 ~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt~sTHKtl~GPrgG 244 (433)
-.+-++..||.+-+-|.-.= -..+=..|+-+++.+. -+||.+|- =++.|++|..++.| |-+-+
T Consensus 5 YlesLrd~r~~Vy~~Ge~V~-dVt~HPaf~~~v~~~A--~~YD~~~d------------p~~~d~~t~~s~~~--g~~v~ 67 (265)
T pfam11794 5 YLESLRDGRPEVYVDGERVE-DVTTHPAFRPSVRSVA--RLYDLAHD------------PEYADLLTATSPTT--GERVN 67 (265)
T ss_pred HHHHHHCCCCEEEECCEECC-CCCCCHHHHHHHHHHH--HHHHHHCC------------CCCCCCEEEECCCC--CCEEE
T ss_conf 99998649966998999926-6566823479999999--99865049------------31355238762899--86642
Q ss_pred EEE---ECCCCHHHHCC------HHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 898---33620565016------646543223445566689999999973564899999999888999999861685233
Q gi|254780349|r 245 LIM---TNHADLAKKIN------SAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIV 315 (433)
Q Consensus 245 iI~---~~~~e~~~~i~------~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv 315 (433)
..+ ...+++.+|-+ +..+--++.+ +..+.+...++.......+.+|++ |++..-+..+++.+-+.
T Consensus 68 ~~~~~p~s~eDL~~r~~a~~~~a~~t~G~~gR~--pD~~n~~~~~~~~~~~~~g~~y~~----n~~~y~~~~~~nDl~~~ 141 (265)
T pfam11794 68 RFFHIPRSKEDLVKRRKAIRLWARLTGGCMGRG--PDYLNALLMTLYANAEKYGTEYAE----NFRRYYKYAQENDLYLT 141 (265)
T ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHCCEEEECC--HHHHHHHHHHHHHHHHHHCCHHHH----HHHHHHHHHHHHCCEEE
T ss_conf 644499999999999999999999819251058--789999999999758775827899----99999999997095535
Q ss_pred C
Q ss_conf 4
Q gi|254780349|r 316 S 316 (433)
Q Consensus 316 ~ 316 (433)
.
T Consensus 142 ~ 142 (265)
T pfam11794 142 H 142 (265)
T ss_pred E
T ss_conf 4
No 478
>PRK11920 rirA iron-responsive transcriptional regulator; Reviewed
Probab=34.50 E-value=16 Score=17.19 Aligned_cols=16 Identities=31% Similarity=0.659 Sum_probs=9.7
Q ss_pred CCCCCCCCEEEEECCC
Q ss_conf 6522567448983362
Q gi|254780349|r 236 KSLRGPRGGLIMTNHA 251 (433)
Q Consensus 236 Ktl~GPrgGiI~~~~~ 251 (433)
||.||+.||..+.+++
T Consensus 55 ~S~RG~~GGy~Lar~p 70 (153)
T PRK11920 55 ETVRGRNGGVRLGKPA 70 (153)
T ss_pred EECCCCCCCEEECCCH
T ss_conf 8458898863544898
No 479
>KOG3890 consensus
Probab=33.95 E-value=35 Score=14.89 Aligned_cols=126 Identities=15% Similarity=0.173 Sum_probs=63.7
Q ss_pred CHHHHHHHHHHHCCCEEEEECCCCC-CCCCHHHHHHHHHHCCCEEEECCCCH------H--HHHHHHCCCCCCCC---CC
Q ss_conf 9899999998604667897055243-53637999988641797899186201------2--44320001232200---23
Q gi|254780349|r 161 DMHEIESLAIEYNPKLIIVGGTAYS-RVWDWERFRSIADSIGAYLMADISHI------S--GLVVGGQHPSPVPH---CH 228 (433)
Q Consensus 161 D~d~~~~~a~~~kPklIi~G~S~y~-~~~d~~~l~eIa~~~ga~l~~D~aH~------~--GLIa~g~~~~Pl~~---AD 228 (433)
.+|+-.++.+-+-|| -|.++|+ +.+-=+-++..-++..--.+.|-+-+ - --|.+.+|.. +++ -|
T Consensus 157 ~~ee~dRMnq~Yfpk---egR~~~tP~~F~eenL~~~l~~~~hefVLd~~~~qyEPd~pey~~is~~vfe~-inesgkfd 232 (391)
T KOG3890 157 TLEETDRMNQLYFPK---EGRQSYTPRMFAEENLAKCLAEHKHEFVLDRLLVQYEPDEPEYHNISARVFEH-INESGKFD 232 (391)
T ss_pred CHHHHHHHHHHCCCC---CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH-HCCCCCEE
T ss_conf 877764566410567---88756898543536899988620069999999985389973773267899986-42046534
Q ss_pred EEEECCCCCCCCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
Q ss_conf 567404565225674489833620565016646543223445566689999999973564899999999888
Q gi|254780349|r 229 IVTTTTHKSLRGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNS 300 (433)
Q Consensus 229 vvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA 300 (433)
++++|-| + |+|.++= -+.++||.-..- +++-..-.-|+-.|+|..++.|.++.|+.|--+.-
T Consensus 233 llrSTRh---F---Gpm~fy~--a~n~~Id~LL~d--~i~rd~l~da~nLV~L~~~lhpd~~~~~Aqg~~d~ 294 (391)
T KOG3890 233 LLRSTRH---F---GPMAFYY--AWNRCIDDLLYD--MIRRDYLHDAVNLVALSYKLHPDPVEYQAQGTEDG 294 (391)
T ss_pred EEEECCC---C---CCEEEEE--EHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC
T ss_conf 6731230---3---7556653--211358999999--86021456689999998775786153320135322
No 480
>cd00156 REC Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; contains a phosphoacceptor site that is phosphorylated by histidine kinase homologs; usually found N-terminal to a DNA binding effector domain; forms homodimers
Probab=33.90 E-value=30 Score=15.36 Aligned_cols=46 Identities=22% Similarity=0.364 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHCCCCCCC---C--------CCCCCEEEECCCCCCCCHHHHHHHHHH
Q ss_conf 889999998616852334---5--------888981263166556767999998885
Q gi|254780349|r 299 NSQALAKKLQFLGFDIVS---G--------GTDNHLMLVDLRSKRMTGKRAESILGR 344 (433)
Q Consensus 299 NA~~La~~L~~~G~~vv~---g--------gTd~H~vlvdl~~~~~~G~~a~~~Le~ 344 (433)
+.+.+.+.|...||.|.+ | ...-+++++|++=.+++|-++.+.+.+
T Consensus 9 ~~~~l~~~L~~~g~~v~~a~~g~~al~~~~~~~~dlvi~D~~mP~~~G~el~~~ir~ 65 (113)
T cd00156 9 IRELLRRLLEKEGYEVVEAEDGEEALALLAEEKPDLILLDIMMPGMDGLELLRRIRK 65 (113)
T ss_pred HHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHH
T ss_conf 999999999988999999899999999987579999997799989872699999998
No 481
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=33.82 E-value=35 Score=14.88 Aligned_cols=129 Identities=11% Similarity=0.156 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHCCCC-CE--ECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999999871886-30--1000016799999999831548748812334484111476654333332201366583
Q gi|254780349|r 79 DIENIAIERAKKLFNVN-FV--NVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRK 155 (433)
Q Consensus 79 ~iE~la~~~a~~lF~a~-~a--nvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~ 155 (433)
+++..+.+ ..+++|.. .+ .+.-+||-+--.++.+--+-..-+|+.+|.+-.| +|+
T Consensus 116 ~~~~rv~e-lL~~vgL~~~~~~~p~~LSGGqkQRV~IArALa~~P~iLl~DEPTsa---------------------LDp 173 (343)
T PRK11153 116 EIKRRVTE-LLDLVGLGDKHDSYPANLSGGQKQRVAIARALASNPKVLLCDEATSA---------------------LDP 173 (343)
T ss_pred HHHHHHHH-HHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC---------------------CCH
T ss_conf 99999999-99877994476197511899999999999998669999999288765---------------------899
Q ss_pred CCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCC-CC-CCEEEEC
Q ss_conf 235659899999998604667897055243536379999886417978991862012443200012322-00-2356740
Q gi|254780349|r 156 EDGLLDMHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPV-PH-CHIVTTT 233 (433)
Q Consensus 156 ~~~~ID~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl-~~-ADvvt~s 233 (433)
.+..-=++-+.++.++..--+|++ .+|...+++|||++- +|.++-=+--=-.-.+|.+|- +| .+++-++
T Consensus 174 ~t~~~Il~lL~~l~~e~g~TivlI-------THdm~~v~~icdrVa--Vm~~G~IVE~G~~~evf~~P~~~~tk~li~~~ 244 (343)
T PRK11153 174 ATTRSILELLKDINRRLGLTILLI-------THEMDVVKRICDCVA--VISNGELIEQDTVSEVFSHPKTPLAQKFIQST 244 (343)
T ss_pred HHHHHHHHHHHHHHHHHCCEEEEE-------CCCHHHHHHHCCEEE--EEECCEEEEECCHHHHHHCCCCHHHHHHCCCC
T ss_conf 999999999999999619899998-------889999998699999--99898899986889997389997999970886
Q ss_pred CCCCC
Q ss_conf 45652
Q gi|254780349|r 234 THKSL 238 (433)
Q Consensus 234 THKtl 238 (433)
.|-.+
T Consensus 245 ~~~~~ 249 (343)
T PRK11153 245 LHLDI 249 (343)
T ss_pred CCCCC
T ss_conf 75558
No 482
>TIGR02316 propion_prpE propionate--CoA ligase; InterPro: IPR012694 This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterised members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.; GO: 0050218 propionate-CoA ligase activity, 0019629 propionate catabolic process 2-methylcitrate cycle.
Probab=33.76 E-value=35 Score=14.87 Aligned_cols=29 Identities=21% Similarity=0.248 Sum_probs=25.7
Q ss_pred CEECCCHHHHHHHHHHHHHH-HCCCCEEEE
Q ss_conf 30100001679999999983-154874881
Q gi|254780349|r 96 FVNVQSHSGSQMNQGVFLAL-MHPGDSFMG 124 (433)
Q Consensus 96 ~anvqp~SG~~An~av~~AL-l~pGD~Il~ 124 (433)
|.-=|.|.-.|+.-+++.|| ++.||+|+.
T Consensus 88 ~tyR~lH~EVN~~As~l~aLGV~RGDRVli 117 (634)
T TIGR02316 88 YTYRQLHREVNAVASALRALGVRRGDRVLI 117 (634)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf 047788789999999998727876877899
No 483
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=33.74 E-value=35 Score=14.87 Aligned_cols=16 Identities=19% Similarity=0.310 Sum_probs=6.4
Q ss_pred CCCHHHHHHHHHHHHH
Q ss_conf 9998999999999999
Q gi|254780349|r 378 GFKEKDFEYIGELIAQ 393 (433)
Q Consensus 378 G~~e~em~~iA~li~~ 393 (433)
|+++..-.++-++|.+
T Consensus 183 gLD~~~~~~i~~~l~~ 198 (236)
T cd03267 183 GLDVVAQENIRNFLKE 198 (236)
T ss_pred CCCHHHHHHHHHHHHH
T ss_conf 8899999999999999
No 484
>TIGR02845 spore_V_AD stage V sporulation protein AD; InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation ..
Probab=33.68 E-value=35 Score=14.86 Aligned_cols=109 Identities=23% Similarity=0.298 Sum_probs=70.2
Q ss_pred EEEECCCCHHHHHHHHCCCCCCCCC--------CEEEECCCCCCCCCCCEEEEECCCC--------HHHHCCHHHCHHHH
Q ss_conf 8991862012443200012322002--------3567404565225674489833620--------56501664654322
Q gi|254780349|r 203 YLMADISHISGLVVGGQHPSPVPHC--------HIVTTTTHKSLRGPRGGLIMTNHAD--------LAKKINSAIFPGLQ 266 (433)
Q Consensus 203 ~l~~D~aH~~GLIa~g~~~~Pl~~A--------Dvvt~sTHKtl~GPrgGiI~~~~~e--------~~~~i~~avfPg~q 266 (433)
.|-+=-||.+- |=.+|-.|.+|+ .-||| -|++|+.+.++ +.|-.|-.++
T Consensus 129 vLaAtSSHy~t--aERQFRYPTEyG~Qkp~tAq~TVTG---------AGA~~l~~~~~~~~it~aT~GkV~D~G~~---- 193 (331)
T TIGR02845 129 VLAATSSHYAT--AERQFRYPTEYGVQKPPTAQWTVTG---------AGAVLLASTGGGPRITSATIGKVVDLGLT---- 193 (331)
T ss_pred HHHHHCCHHHH--HHHHCCCCCCCCCCCCCCCCCCEEH---------HHEEEECCCCCCCEEEEEEEEEEEECCCC----
T ss_conf 11121111353--2210256512561159988612503---------46486544789436414530147712336----
Q ss_pred HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH------------HHHHHHHHHHHC-CCCCCCCCCCCCEEEECC
Q ss_conf 34455666899999999735648999999998------------889999998616-852334588898126316
Q gi|254780349|r 267 GGPFMHSIAAKAVAFGEALSSEFRDYAKQIVL------------NSQALAKKLQFL-GFDIVSGGTDNHLMLVDL 328 (433)
Q Consensus 267 g~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~------------NA~~La~~L~~~-G~~vv~ggTd~H~vlvdl 328 (433)
+| ++.=+|.|-|..+.....||+-..++=+ =...+-+-|.|+ |++|-..+.||-++.-+.
T Consensus 194 -dP-~~mG~AMAPAAaDTI~~Hf~dtg~~~~DYDLIvTGDL~rvG~~I~~~LL~e~yg~~~~~~Y~DCG~~IY~~ 266 (331)
T TIGR02845 194 -DP-LDMGAAMAPAAADTIEAHFKDTGRSVDDYDLIVTGDLARVGSEILRKLLKEEYGYDVTEKYDDCGVMIYRP 266 (331)
T ss_pred -CC-CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEECC
T ss_conf -86-41135412689999999998707880401367873300214899999988860875000104564675338
No 485
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated
Probab=33.64 E-value=35 Score=14.86 Aligned_cols=66 Identities=20% Similarity=0.291 Sum_probs=36.4
Q ss_pred HHHHHHHH-HHCCCEEEEECCC-CCCCCCHHHHHHHHHHCCCEEE--------EC--CCCHHHHHHHHCCCC-----CCC
Q ss_conf 99999998-6046678970552-4353637999988641797899--------18--620124432000123-----220
Q gi|254780349|r 163 HEIESLAI-EYNPKLIIVGGTA-YSRVWDWERFRSIADSIGAYLM--------AD--ISHISGLVVGGQHPS-----PVP 225 (433)
Q Consensus 163 d~~~~~a~-~~kPklIi~G~S~-y~~~~d~~~l~eIa~~~ga~l~--------~D--~aH~~GLIa~g~~~~-----Pl~ 225 (433)
+++.+++. ..|| +|++|.-+ ...+--.+.++++++..|+.++ ++ -.+.+|.+ |.+.+ -+.
T Consensus 202 ~~a~~~L~~AkrP-vii~G~Gv~~sg~~a~~~l~~lae~l~~PV~tt~~gkg~~p~~hp~~~G~~--G~~g~~~a~~~l~ 278 (594)
T PRK09107 202 REAVALLANAKRP-VIYSGGGVINSGPEASRLLRELVELTGFPITSTLMGLGAYPASGKNWLGML--GMHGTYEANMAMH 278 (594)
T ss_pred HHHHHHHHHCCCC-EEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCCCCCCCCCCCCC--CCCCCHHHHHHHH
T ss_conf 9999999717898-798064012206899999999999778781402102666577776667775--7778889997662
Q ss_pred CCCEEE
Q ss_conf 023567
Q gi|254780349|r 226 HCHIVT 231 (433)
Q Consensus 226 ~ADvvt 231 (433)
+||+|-
T Consensus 279 ~aDlvl 284 (594)
T PRK09107 279 DCDVML 284 (594)
T ss_pred CCCEEE
T ss_conf 588699
No 486
>PRK13135 consensus
Probab=33.49 E-value=35 Score=14.84 Aligned_cols=93 Identities=17% Similarity=0.329 Sum_probs=49.3
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC----CEEEEECC
Q ss_conf 99999998315487488123344841114766543333322013665832356598999999986046----67897055
Q gi|254780349|r 107 MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNP----KLIIVGGT 182 (433)
Q Consensus 107 An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kP----klIi~G~S 182 (433)
...-++.+|.+-|--|+-+-.+.---+.-|....-+. .+.. ++| ++++.+-+++++.|. .+|+.++-
T Consensus 32 ~s~~~l~~l~~~GaDiiElGiPfSDP~ADGPvIq~A~--~rAL------~~G-~~~~~~~~~~~~~r~~~~~PivlM~Y~ 102 (267)
T PRK13135 32 TTEALIPLLAESGADIIELGVPFSDPMADGPTIQLSS--ERAL------AAG-TTLPRILAMVRSVRRRCQVPIVLMGYY 102 (267)
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHH--HHHH------HCC-CCHHHHHHHHHHHHCCCCCCEEEEECC
T ss_conf 9999999999759999997899898666589999999--9999------769-849999999998633589988998423
Q ss_pred CCCCCCCHHHHHHHHHHCC--CEEEECC
Q ss_conf 2435363799998864179--7899186
Q gi|254780349|r 183 AYSRVWDWERFRSIADSIG--AYLMADI 208 (433)
Q Consensus 183 ~y~~~~d~~~l~eIa~~~g--a~l~~D~ 208 (433)
.-.+.+.+++|.+-|.+.| .+++.|.
T Consensus 103 N~i~~yG~e~F~~~~~~~GvdGlIipDL 130 (267)
T PRK13135 103 NPIFAYGLERFAADAAAAGVDGVLLVDL 130 (267)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEECCCC
T ss_conf 0998846899999999749974763789
No 487
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; InterPro: IPR010023 This entry is a part of the haloacid dehalogenase (HAD) superfamily of hydrolases from beta, gamma and epsilon proteobacteria, Aquifex, Fusobacterium, Porphyromonas and Methanosarcina. All characterised members of the HAD-superfamily hydrolase, subfamily IIIA and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs , all of which are found conserved in this family. Lipopolysaccharides of Gram-negative bacteria consist of a heteropolysaccharide component (O-antigen) and a hydrophobic component (lipid A). Linking the two portions is 3-Deoxy-D-manno-octulosonate (KDO), an 8-carbon sugar. Biosynthesis of KDO linked to lipid A proceeds via five steps, one of which involves removal of a phosphate from KDO 8-P via the action of KDO 8-P phosphatase (3.1.3.45 from EC; IPR008230 from INTERPRO) . One member of this family, the YrbI protein from Haemophilus influenzae has been cloned, expressed, purified and found to be an active phosphatase. Furthermore, its crystal structure has been determined . The sequence from Methanosarcina acetivorans, Q8TJL6 from SWISSPROT, is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (IPR003329 from INTERPRO) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences are also closely related to this family; one such sequence is the CMP-N-acetylneuraminic acid synthetase from mouse, but in this case as in the others the phosphatase domain is clearly inactive as many of the active site residues are not conserved.; GO: 0019143 3-deoxy-manno-octulosonate-8-phosphatase activity, 0009103 lipopolysaccharide biosynthetic process.
Probab=33.43 E-value=17 Score=17.09 Aligned_cols=126 Identities=15% Similarity=0.194 Sum_probs=76.3
Q ss_pred CCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 74489833620565016646543223445566689999999973564899999999888999999861685233458889
Q gi|254780349|r 242 RGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDN 321 (433)
Q Consensus 242 rgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~ 321 (433)
-|=+++|++.|.-|.. +|--|. ++ +++...+..-|-=.=+||+.+...+.+.|+..+..|..+
T Consensus 14 DGkiyyt~nGE~iK~F--NV~DG~------------gI---~~~lk~gi~~AiItGR~~~~v~~R~k~Lgi~~lY~G~~~ 76 (154)
T TIGR01670 14 DGKIYYTENGEEIKAF--NVKDGI------------GI---KLLLKLGIKVAIITGRDAKLVEKRLKELGIKELYQGSKD 76 (154)
T ss_pred CCEEEECCCCCEEEEE--CCCCCH------------HH---HHHHHCCCEEEEEECCCCHHHHHHHHHCCCEEEECCCHH
T ss_conf 6706663888443120--154528------------99---999974986989817987568988877582032058656
Q ss_pred CEEEEC-C-CCCCCC-------HHHH--HHHHHHCCEEEE-CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf 812631-6-655676-------7999--998885671880-378998999988898512246667307999899999999
Q gi|254780349|r 322 HLMLVD-L-RSKRMT-------GKRA--ESILGRVSITCN-KNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGE 389 (433)
Q Consensus 322 H~vlvd-l-~~~~~~-------G~~a--~~~Le~~gI~~N-kn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~ 389 (433)
-+.... + .+..+. |... -..||++|..+. +|..|- +|=-.--+|+|-=|+.-++|+++
T Consensus 77 KL~~~~~ileKl~l~~e~~a~iGDd~~D~~vmekVGlsvav~da~~~----------l~~~adyvt~~~GG~gAvrev~e 146 (154)
T TIGR01670 77 KLAIYEEILEKLALKDEEVAYIGDDLVDKEVMEKVGLSVAVKDAHKE----------LRKVADYVTRKKGGKGAVREVIE 146 (154)
T ss_pred HHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCCHHH----------CCCEEEEEECCCCCHHHHHHHHH
T ss_conf 89999998887478702213662510065888536995230122121----------10415568615563558999999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780349|r 390 LIAQI 394 (433)
Q Consensus 390 li~~~ 394 (433)
+|...
T Consensus 147 ll~~~ 151 (154)
T TIGR01670 147 LLLLK 151 (154)
T ss_pred HHHHH
T ss_conf 99975
No 488
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=33.40 E-value=35 Score=14.83 Aligned_cols=94 Identities=15% Similarity=0.172 Sum_probs=51.5
Q ss_pred HHHHHHHCCCCC---EECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999998718863---01000016799999999831548748812334484111476654333332201366583235659
Q gi|254780349|r 85 IERAKKLFNVNF---VNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLD 161 (433)
Q Consensus 85 ~~~a~~lF~a~~---anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID 161 (433)
++.+.++++..+ -.++-+||-+--...++..+-..-+++.+|.+-.| +|+....-=
T Consensus 117 v~~~l~~~~l~~~~~~~~~~LSgGqkQrv~iAraL~~~P~lLlLDEPtag---------------------LD~~~~~~i 175 (271)
T PRK13638 117 VDEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGALVLQARYLLLDEPTAG---------------------LDPAGRTQM 175 (271)
T ss_pred HHHHHHHCCCHHHHCCCHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCC---------------------CCHHHHHHH
T ss_conf 99999753942223089355999999999999999659998998387545---------------------899999999
Q ss_pred HHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCC
Q ss_conf 899999998604667897055243536379999886417978991862
Q gi|254780349|r 162 MHEIESLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADIS 209 (433)
Q Consensus 162 ~d~~~~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~a 209 (433)
++-++++..+-+ .+|++ .+|+..+.++||++- ++.|+-
T Consensus 176 ~~ll~~l~~~G~-tiiiv-------sHdl~~v~~~aDrv~--vl~~G~ 213 (271)
T PRK13638 176 IAIIRRIVAQGN-HVIIS-------SHDIDLIYEISDAVY--VLRQGQ 213 (271)
T ss_pred HHHHHHHHHCCC-EEEEE-------CCCHHHHHHHCCEEE--EEECCE
T ss_conf 999999997899-99998-------488899999699999--998998
No 489
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein; InterPro: IPR005670 This is a family of phosphate transport system permease proteins.; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0015114 phosphate transmembrane transporter activity, 0006817 phosphate transport, 0016020 membrane.
Probab=33.05 E-value=35 Score=14.88 Aligned_cols=81 Identities=22% Similarity=0.365 Sum_probs=48.3
Q ss_pred CCCCCCCCHHHHHHHHHHHCC--CEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCE
Q ss_conf 832356598999999986046--6789705524353637999988641797899186201244320001232200--235
Q gi|254780349|r 154 RKEDGLLDMHEIESLAIEYNP--KLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHI 229 (433)
Q Consensus 154 d~~~~~ID~d~~~~~a~~~kP--klIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADv 229 (433)
.+.|..=-+.++.++....|- ++++-|...|...+|..++|+ +||-.+ +-|||||. -|=
T Consensus 39 GKSTlLR~lNRMnDl~~~~r~~G~v~f~G~dIy~~~~D~~~LR~---~vGMVF--------------Q~PNPFpmSIydN 101 (248)
T TIGR00972 39 GKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRK---RVGMVF--------------QKPNPFPMSIYDN 101 (248)
T ss_pred CHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCHHHHHH---HCCCCC--------------CCCCCCCCCHHHH
T ss_conf 67899999887764078816888898645114565668788762---258521--------------4789788405567
Q ss_pred EEECCCCCCCCCCCEEEEECCCCHHHHCCH
Q ss_conf 674045652256744898336205650166
Q gi|254780349|r 230 VTTTTHKSLRGPRGGLIMTNHADLAKKINS 259 (433)
Q Consensus 230 vt~sTHKtl~GPrgGiI~~~~~e~~~~i~~ 259 (433)
|+. |||--=|-.|+ ++.+.+..
T Consensus 102 iay-------G~r~~G~~~K~-~L~e~Ve~ 123 (248)
T TIGR00972 102 IAY-------GPRLHGIKDKK-ELDEIVEE 123 (248)
T ss_pred HHH-------HHHHCCCCCHH-HHHHHHHH
T ss_conf 545-------24521633778-99999999
No 490
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=33.02 E-value=36 Score=14.79 Aligned_cols=11 Identities=18% Similarity=0.619 Sum_probs=4.4
Q ss_pred HHHHHHHHHCC
Q ss_conf 99998864179
Q gi|254780349|r 191 ERFRSIADSIG 201 (433)
Q Consensus 191 ~~l~eIa~~~g 201 (433)
+.++++.+.+|
T Consensus 94 ~~~~~lr~~vG 104 (304)
T PRK13651 94 KKIKEIRRRVG 104 (304)
T ss_pred HHHHHHHHCEE
T ss_conf 66898773379
No 491
>PRK07825 short chain dehydrogenase; Provisional
Probab=32.98 E-value=24 Score=16.06 Aligned_cols=40 Identities=18% Similarity=0.213 Sum_probs=29.2
Q ss_pred CHHHHHHH---HHHHHHHHHHHHHHHHCCCCCCC---CCCCCCEEE
Q ss_conf 56489999---99998889999998616852334---588898126
Q gi|254780349|r 286 SSEFRDYA---KQIVLNSQALAKKLQFLGFDIVS---GGTDNHLML 325 (433)
Q Consensus 286 ~~~f~~Ya---~qvv~NA~~La~~L~~~G~~vv~---ggTd~H~vl 325 (433)
.|....|+ .-++.-++.|+.+|...|++|-+ |.++|-++-
T Consensus 144 ~p~~~~Y~ASK~av~g~t~sLa~El~~~gIrVn~V~PG~v~T~m~~ 189 (273)
T PRK07825 144 VPGMATYCASKHAVVGLTDALRLELRPTGVHVSVVLPTFVNTELIA 189 (273)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC
T ss_conf 9998359999999999999999985230959999970999856579
No 492
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=32.68 E-value=36 Score=14.75 Aligned_cols=95 Identities=15% Similarity=0.231 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC---CC--EEEE
Q ss_conf 799999999831548748812334484111476654333332201366583235659899999998604---66--7897
Q gi|254780349|r 105 SQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYN---PK--LIIV 179 (433)
Q Consensus 105 ~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~k---Pk--lIi~ 179 (433)
...-.-++.+|.+-|--++-+-.+.---+--|..+..++. +. -...+..+..-+++++.| ++ +|+.
T Consensus 30 ~e~s~e~i~~L~~~GaD~iELGvPfSDPvADGP~Iq~A~~--rA-------L~~g~t~~~~lel~~~~r~~~~~~Pivlm 100 (265)
T COG0159 30 LETSLEIIKTLVEAGADILELGVPFSDPVADGPTIQAAHL--RA-------LAAGVTLEDTLELVEEIRAKGVKVPIVLM 100 (265)
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHH--HH-------HHCCCCHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 8999999999986798889966888886766889999899--99-------97799889999999999861899988998
Q ss_pred ECCCCCCCCCHHHHHHHHHHCC--CEEEECC
Q ss_conf 0552435363799998864179--7899186
Q gi|254780349|r 180 GGTAYSRVWDWERFRSIADSIG--AYLMADI 208 (433)
Q Consensus 180 G~S~y~~~~d~~~l~eIa~~~g--a~l~~D~ 208 (433)
++-+-.+...+++|-+-|.+.| .+++.|.
T Consensus 101 ~Y~Npi~~~Gie~F~~~~~~~GvdGlivpDL 131 (265)
T COG0159 101 TYYNPIFNYGIEKFLRRAKEAGVDGLLVPDL 131 (265)
T ss_pred EECCHHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf 7011887735999999999759987985789
No 493
>TIGR02660 nifV_homocitr homocitrate synthase; InterPro: IPR013477 Most NifV-type homocitrate synthases are encoded within operons for nitrogen fixation. They are homologous to enzymes that include 2-isopropylmalate synthase, (R)-citramalate synthase, and homocitrate synthases associated with other processes. The homocitrate made by these enzymes becomes a part of the iron-molybdenum cofactor of nitrogenase.; GO: 0004410 homocitrate synthase activity, 0051188 cofactor biosynthetic process.
Probab=32.64 E-value=36 Score=14.75 Aligned_cols=18 Identities=33% Similarity=0.453 Sum_probs=10.6
Q ss_pred CCHHHHHHHHCCCCCCCC
Q ss_conf 201244320001232200
Q gi|254780349|r 209 SHISGLVVGGQHPSPVPH 226 (433)
Q Consensus 209 aH~~GLIa~g~~~~Pl~~ 226 (433)
+|-+|+=+.|+.+||-.|
T Consensus 282 ~HESGIHVdGlLkd~~tY 299 (369)
T TIGR02660 282 THESGIHVDGLLKDPRTY 299 (369)
T ss_pred ECCCHHHHHHHHCCCCCC
T ss_conf 001178788763470027
No 494
>KOG3489 consensus
Probab=32.61 E-value=33 Score=15.03 Aligned_cols=22 Identities=23% Similarity=0.377 Sum_probs=18.9
Q ss_pred HHHHHCHHHHHHHHHHHHHHHH
Q ss_conf 6978589999999999999983
Q gi|254780349|r 13 SLIESDPDVFSLIGQESCRQND 34 (433)
Q Consensus 13 ~l~~~Dpei~~~i~~e~~rq~~ 34 (433)
.|...|||+.+.|+.|..||+-
T Consensus 6 ~l~~~~~el~~fl~~E~qk~k~ 27 (86)
T KOG3489 6 ALDANDPELQQFLEAETQKQKF 27 (86)
T ss_pred HCCCCCHHHHHHHHHHHHHHHH
T ss_conf 0263649999999999999999
No 495
>PRK09997 hydroxypyruvate isomerase; Provisional
Probab=32.60 E-value=36 Score=14.74 Aligned_cols=117 Identities=15% Similarity=0.150 Sum_probs=64.7
Q ss_pred HHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEE
Q ss_conf 99986046678970552435363799998864179789918620124432000123220023567404565225674489
Q gi|254780349|r 167 SLAIEYNPKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHIVTTTTHKSLRGPRGGLI 246 (433)
Q Consensus 167 ~~a~~~kPklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt~sTHKtl~GPrgGiI 246 (433)
+.|.+.-=+-|=+ .+|...|.+++++..++.|-.++. +..|.. |.. .|-+ |+.
T Consensus 22 ~aAa~~GF~aVE~---~~Py~~~~~~l~~~l~~~gL~~~l-------------~n~p~G--d~~--------~g~~-G~a 74 (258)
T PRK09997 22 EKAAQCGFRGVEF---MFPYDYDIEELKQVLASNKLEHTL-------------HNLPAG--DWA--------AGER-GIA 74 (258)
T ss_pred HHHHHCCCCEEEE---CCCCCCCHHHHHHHHHHCCCCEEE-------------ECCCCC--CCC--------CCCC-CCC
T ss_conf 9999819999996---486658999999999976992899-------------767888--634--------4666-755
Q ss_pred E--ECCCCHHHHCCHHH-CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 8--33620565016646-543223445566689999999973564899999999888999999861685233
Q gi|254780349|r 247 M--TNHADLAKKINSAI-FPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIV 315 (433)
Q Consensus 247 ~--~~~~e~~~~i~~av-fPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv 315 (433)
. .+++++.+.++.++ +-...|.+.+|.++++...= ..-.+.-...++|=+..++.+.+.|..++
T Consensus 75 a~P~~~~efr~~i~~ai~yA~~lg~~~i~vmaG~~~~g-----~~~~~~~~~~venL~~aa~~a~~~gv~l~ 141 (258)
T PRK09997 75 CIPGREEEFRDGVAAAIRYARALGNKKINCLVGKTPSG-----FSSEQIHDTLVENLRYAANMLMKEDILLL 141 (258)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC-----CCHHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_conf 78861999999999999999983999688811358888-----89899999999999999999986598799
No 496
>TIGR02647 DNA conserved hypothetical protein TIGR02647; InterPro: IPR013468 Proteins in this entry are found, so far, only in the Gammaproteobacteria. Their function is currently unknown. The location on the chromosome is usually not far from housekeeping genes. Some proteins have been annotated in public databases as DNA-binding protein inhibitors, putative transcriptional regulators, or hypothetical DNA binding proteins..
Probab=32.34 E-value=37 Score=14.72 Aligned_cols=53 Identities=19% Similarity=0.207 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
Q ss_conf 679999999999999871886301000016799999999831548748812334484111
Q gi|254780349|r 75 QYVDDIENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLT 134 (433)
Q Consensus 75 ~~~d~iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHls 134 (433)
|.|||+|.| .+|+.+-+.-=.-=-+.|.-.+..|.-+-.+|=| .+-++||+||
T Consensus 6 e~i~Ele~L------~lF~l~~~~~G~Kv~~~A~~~~~aA~~RL~~K~L-~~QpDGGYLT 58 (77)
T TIGR02647 6 ELIAELELL------ALFNLSSTQEGLKVHSTASPAAVAAAKRLYEKGL-TDQPDGGYLT 58 (77)
T ss_pred HHHHHHHHH------HHHCCCCCCCCCEEECHHHHHHHHHHHHHHHCCC-CCCCCCCCHH
T ss_conf 689999999------8733433237730100103789999998873377-5579975013
No 497
>PRK11014 transcriptional repressor NsrR; Provisional
Probab=31.87 E-value=17 Score=16.98 Aligned_cols=17 Identities=29% Similarity=0.626 Sum_probs=0.0
Q ss_pred CCCCCCCCEEEEECCCC
Q ss_conf 65225674489833620
Q gi|254780349|r 236 KSLRGPRGGLIMTNHAD 252 (433)
Q Consensus 236 Ktl~GPrgGiI~~~~~e 252 (433)
+|.|||.||.-+.++++
T Consensus 56 ~S~RG~~GGy~Lar~p~ 72 (141)
T PRK11014 56 TAVRGKNGGIRLGKPAS 72 (141)
T ss_pred EECCCCCCCEECCCCHH
T ss_conf 72047998832148988
No 498
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=31.84 E-value=37 Score=14.66 Aligned_cols=48 Identities=13% Similarity=0.115 Sum_probs=0.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCC----EEEEECCCCCCCCCHHHHHHHHHHC
Q ss_conf 658323565989999999860466----7897055243536379999886417
Q gi|254780349|r 152 NVRKEDGLLDMHEIESLAIEYNPK----LIIVGGTAYSRVWDWERFRSIADSI 200 (433)
Q Consensus 152 ~~d~~~~~ID~d~~~~~a~~~kPk----lIi~G~S~y~~~~d~~~l~eIa~~~ 200 (433)
|+|++ +.||++.++++++..-.+ ++++|.+.=-.....++-.++.+.+
T Consensus 11 PF~~d-g~iD~~~~~~~i~~l~~~Gv~gi~v~GstGE~~~Ls~eEr~~v~~~~ 62 (289)
T cd00951 11 HFDAD-GSFDEDAYRAHVEWLLSYGAAALFAAGGTGEFFSLTPDEYAQVVRAA 62 (289)
T ss_pred CCCCC-CCCCHHHHHHHHHHHHHCCCCEEEECCHHHCCCCCCHHHHHHHHHHH
T ss_conf 76899-59799999999999997799999979330062128999999999999
No 499
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=31.77 E-value=38 Score=14.65 Aligned_cols=60 Identities=13% Similarity=0.186 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCC-----CEEEEECCCCC--CCCCHHHHHHHHHHCCCEEEECCCC
Q ss_conf 665832356598999999986046-----67897055243--5363799998864179789918620
Q gi|254780349|r 151 YNVRKEDGLLDMHEIESLAIEYNP-----KLIIVGGTAYS--RVWDWERFRSIADSIGAYLMADISH 210 (433)
Q Consensus 151 y~~d~~~~~ID~d~~~~~a~~~kP-----klIi~G~S~y~--~~~d~~~l~eIa~~~ga~l~~D~aH 210 (433)
+.++.-.-.|+-++++.+.+..+- .++++.+|.=+ -+-.|.++-++|++.|+.++.|.|.
T Consensus 102 Tein~~Gp~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 102 TEINFPGPEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCH
T ss_conf 8704889988999999999999975664889999088999999799999999998659839997985
No 500
>PRK08303 short chain dehydrogenase; Provisional
Probab=31.75 E-value=38 Score=14.65 Aligned_cols=57 Identities=23% Similarity=0.230 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCC---CCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 998889999998616852334---58889812631665567679999988856718803789989999888985122466
Q gi|254780349|r 296 IVLNSQALAKKLQFLGFDIVS---GGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTP 372 (433)
Q Consensus 296 vv~NA~~La~~L~~~G~~vv~---ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~ 372 (433)
+..=+|.||.+|..+|++|.+ |.++|-+++ ...+.+....++.+.+ .+++. |.|||
T Consensus 182 v~~ltr~lA~Ela~~GIrVNaV~PG~i~T~~~~---~~~~~~ee~~~~~~~~--------------~~~~~----r~~tP 240 (305)
T PRK08303 182 VLRLAFSLAHELAPHGATAVALTPGWLRSEMML---DHFGVTEENWRDATAK--------------EPHFA----ISETP 240 (305)
T ss_pred HHHHHHHHHHHHHHHCEEEEEEEECCCCCHHHH---HHCCCCHHHHHHHHHC--------------CCCCC----CCCCH
T ss_conf 999999999997341919999963887755435---3325887899998703--------------88655----66698
Q ss_pred H
Q ss_conf 6
Q gi|254780349|r 373 S 373 (433)
Q Consensus 373 a 373 (433)
+
T Consensus 241 e 241 (305)
T PRK08303 241 R 241 (305)
T ss_pred H
T ss_conf 9
Done!