HHsearch alignment for GI: 254780349 and conserved domain: pfam00202

Probab=98.21  E-value=0.00024  Score=50.84  Aligned_cols=228  Identities=19%  Similarity=0.214  Sum_probs=110.1

Q ss_pred             HHHHHHHHCCC--CCEECCCHHHHHHHHHHHHHHH-------CC-CCEEEECCCCCCCCCCCCCCCCCCC----------
Q ss_conf             99999987188--6301000016799999999831-------54-8748812334484111476654333----------
Q gi|254780349|r   84 AIERAKKLFNV--NFVNVQSHSGSQMNQGVFLALM-------HP-GDSFMGLSLDSGGHLTHGSSVNMSG----------  143 (433)
Q Consensus        84 a~~~a~~lF~a--~~anvqp~SG~~An~av~~ALl-------~p-GD~Il~~~l~~GGHlshg~~~~~~g----------  143 (433)
T Consensus        64 lae~l~~~~p~~~~~v-~f~~sGseA~e~AiklAr~~~~~~g~t~r~~il~~~~~yHG~t~--~~~s~s~~~~~~~~~~~  140 (338)
T pfam00202        64 LAEKLAQLTPGGLDRV-FFMNSGSEANETAIKLARQYAKKKGATGKTKIIAFSGGFHGRTL--GALSVTGSSGYKKGFGP  140 (338)
T ss_pred             HHHHHHHHCCCCCCEE-EEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC--EEEEECCCCCCCCCCCC
T ss_conf             9999998578886879-98287689999999999997775378998879999388258873--05881588555556778


Q ss_pred             --CCCCCCCCCCCCC--CCCCCHHHHHHHHHHHCCC---EEEEEC---C---CCCCCCCHHHHHHHHHHCCCEEEECCCC
Q ss_conf             --3322013665832--3565989999999860466---789705---5---2435363799998864179789918620
Q gi|254780349|r  144 --KWFKAIPYNVRKE--DGLLDMHEIESLAIEYNPK---LIIVGG---T---AYSRVWDWERFRSIADSIGAYLMADISH  210 (433)
Q Consensus       144 --~~~~~~~y~~d~~--~~~ID~d~~~~~a~~~kPk---lIi~G~---S---~y~~~~d~~~l~eIa~~~ga~l~~D~aH  210 (433)
T Consensus       141 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaaviiEPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~  220 (338)
T pfam00202       141 SLPGVYFLPYPDLEAAEEELACADEALRLIKAVHDDNIAAVIVEPIQGEGGVVPPPPGFLAGLREICKKHGVLLIADEVQ  220 (338)
T ss_pred             CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCE
T ss_conf             99994574899735420015668999999998589977999998877889976798799999999974327757645310


Q ss_pred             HHHH-HHHHCCC-CCCCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             1244-3200012-32200-23567404565225--674489833620565016646543223445566689999999973
Q gi|254780349|r  211 ISGL-VVGGQHP-SPVPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEAL  285 (433)
Q Consensus       211 ~~GL-Ia~g~~~-~Pl~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~  285 (433)
T Consensus       221 t-GfgRtG~~~~~~~~gv~PDiv~~g--K~l~~G~P~sav-~~~~-~i~~~~~~~~~~~T~~g~p~~~aaa~a~-L-~~l  293 (338)
T pfam00202       221 T-GFGRTGKLFACEHYGVTPDIMTLA--KALTGGLPLSAV-LATA-EIMQAFHPGSHGGTFGGNPLACAAALAV-L-DII  293 (338)
T ss_pred             E-CCCCCCCCCHHHHCCCCCEEEEEC--CCCCCCCCCCCC-CCCH-HHHHHCCCCCCCCCCCHHHHHHHHHHHH-H-HHH
T ss_conf             0-877534874023249887599956--424589987531-1647-7997177999587776649999999999-9-999


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCC
Q ss_conf             56489999999988899999986168523345888981263166556
Q gi|254780349|r  286 SSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSKR  332 (433)
Q Consensus       286 ~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~~  332 (433)
T Consensus       294 ~~------~~l~~~~~~~g~~l~~~-L~~l~----~~~~v~~VRG~G  329 (338)
T pfam00202       294 ED------ENLLQNAQEKGDYLRKG-LLALQ----DKPVIGDVRGRG  329 (338)
T ss_pred             HH------CCHHHHHHHHHHHHHHH-HHHHH----CCCCEEECCCCC
T ss_conf             65------58999999999999999-99854----599737733272