HHsearch alignment for GI: 254780349 and conserved domain: pfam00464
>pfam00464 SHMT Serine hydroxymethyltransferase.
Probab=100.00 E-value=0 Score=1117.16 Aligned_cols=378 Identities=60% Similarity=0.987 Sum_probs=374.7
Q ss_pred HHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 97858999999999999998388810430102989999830510288657988875336006799999999999998718
Q gi|254780349|r 14 LIESDPDVFSLIGQESCRQNDEIQLIASENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFN 93 (433)
Q Consensus 14 l~~~Dpei~~~i~~e~~rq~~~l~LiASEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~ 93 (433)
T Consensus 1 l~~~D~ei~~~i~~E~~rq~~~l~LIASEN~~S~~v~~a~gS~ltnkYaEG~pg~Ryy~G~e~iD~iE~la~~rak~lF~ 80 (380)
T pfam00464 1 LSDSDPEIFDIIKKEKERQREGIELIASENFTSRAVMEALGSVLTNKYAEGYPGKRYYGGCEYVDEVETLAQDRAKELFG 80 (380)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 95429999999999999998295475377757999999855731264658799843346763599999999999999839
Q ss_pred CCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 86301000016799999999831548748812334484111476654333332201366583235659899999998604
Q gi|254780349|r 94 VNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYN 173 (433)
Q Consensus 94 a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~k 173 (433)
T Consensus 81 a~~anVqp~SGs~An~av~~all~PGD~il~l~l~~GGHltHg~~~~~~g~~~~~~~Y~~d~~~~~ID~d~l~~~a~~~k 160 (380)
T pfam00464 81 LDGVNVQPLSGSQANLAVYTALLNPGDRIMGLDLPHGGHLTHGYPVNFSGKFFESMPYGVDPDTGLIDYDQLEKNAKLFK 160 (380)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEECCEEEEEECCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 97635177876999999999983799989953677775456798656201146778743464548668999999999709
Q ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEEEECC--C
Q ss_conf 66789705524353637999988641797899186201244320001232200235674045652256744898336--2
Q gi|254780349|r 174 PKLIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCHIVTTTTHKSLRGPRGGLIMTNH--A 251 (433)
Q Consensus 174 PklIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~ADvvt~sTHKtl~GPrgGiI~~~~--~ 251 (433)
T Consensus 161 PklIi~G~Say~r~~d~~~~reIad~vgA~l~~D~aH~~GLIA~g~~p~Pl~~ADvvt~tTHKTlrGPrGGiIl~~~~~~ 240 (380)
T pfam00464 161 PKLIVAGTSAYSRLIDYARFREIADEVGAYLMVDMAHIAGLVAAGVIPSPFPYAHVVTTTTHKTLRGPRGGMIFFREILY 240 (380)
T ss_pred CCEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCHH
T ss_conf 98899874004364488999999975098899863777777742437995466657853545667899851798378379
Q ss_pred CHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC
Q ss_conf 05650166465432234455666899999999735648999999998889999998616852334588898126316655
Q gi|254780349|r 252 DLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLMLVDLRSK 331 (433)
Q Consensus 252 e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vlvdl~~~ 331 (433)
T Consensus 241 e~~~kId~avFPg~qggp~~h~iAa~Aval~Ea~~~~f~~Ya~qVv~NAk~La~~L~~~G~~vv~ggTd~H~vlvdl~~~ 320 (380)
T pfam00464 241 ELEKKINSAVFPGLQGGPLNHVIAAKAVALKQALTPEFKVYQQQVLKNAKALAEALKERGYKLVSGGTDNHLVLVDLRPK 320 (380)
T ss_pred HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEECCCC
T ss_conf 99999714048876677006579999999999848529999999999999999999978883577999876899977666
Q ss_pred CCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHH
Q ss_conf 676799999888567188037899899998889851224666730799989999999999
Q gi|254780349|r 332 RMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELI 391 (433)
Q Consensus 332 ~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li 391 (433)
T Consensus 321 g~~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~sGiRiGt~~~T~rG~~e~em~~ia~~I 380 (380)
T pfam00464 321 GLDGKRAEKALERANITANKNTIPGDPKSPFVTSGLRLGTPALTSRGFGEADFEEVAGYI 380 (380)
T ss_pred CCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHHHHC
T ss_conf 999999999999769287888598999999888842657778983899889999999659