HHsearch alignment for GI: 254780350 and conserved domain: COG2989
>COG2989 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=100.00 E-value=0 Score=831.12 Aligned_cols=396 Identities=42% Similarity=0.632 Sum_probs=357.6
Q ss_pred HHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCC--------HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 10155542301345676411157678764200078--------8887987366758788999999999999998809985
Q gi|254780350|r 24 LSLVEKPIHASVLDEIINESYHSIVNDRFDNFLAR--------VDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWP 95 (431)
Q Consensus 24 ~~l~s~~l~~~~~~~~i~~~~~~~~d~~f~~~~~~--------~~~~~~s~~P~~s~~~~~~l~~al~~y~~i~~~ggW~ 95 (431)
T Consensus 144 ~~~~~l~yaq~v~~~~i~~~~~~~~~d~~~~~~~~~~~~~~a~~~~~va~~l~sl~Pq~~~Y~al~~~l~~~~~~~~~wp 223 (561)
T COG2989 144 ASLAYLAYAQDVPNGRIRWLRSSGWYDLADPPASVINALQQAVEEGQVASFLPSLAPQNPQYQALAQALYQLIADAGGWP 223 (561)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999986301454743124843335886345789999873364766500238997789999999998430126876
Q ss_pred CC-CCC-CCCCCCCCCCHHHHHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHH
Q ss_conf 47-777-4146888824899999999819-86656787764578999999999998088878702999998844898898
Q gi|254780350|r 96 EL-PIR-PLHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172 (431)
Q Consensus 96 ~i-~~~-~L~~G~~~~~V~~Lr~RL~~~G-dl~~~~~~~~~yD~~l~~AVk~FQ~rhGL~~DGvig~~Tl~aLN~~~~~r 172 (431)
T Consensus 224 ~v~~~~~~LrpG~~~~~v~aL~~~L~~~~~d~~~a~~~s~~yd~el~~avKrfQ~~~GL~~DGviG~~T~~aLn~s~~~R 303 (561)
T COG2989 224 QVIPAGALLRPGVTSPDVPALRARLARSGMDLPSAAGSSPAYDPELVEAVKRFQARHGLPADGVIGPATRAALNVSVQIR 303 (561)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHH
T ss_conf 33687642478987266899999997507530112057643457788999999997089977744589999862679889
Q ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHH
Q ss_conf 88986407753035556765234542045248999988855554123138877778554210038984487788766777
Q gi|254780350|r 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252 (431)
Q Consensus 173 ~~qi~~nler~r~l~~~~~~~~~v~VNip~~~l~~~e~g~~~~~~~viVGk~~~~TP~~~~~i~~iv~NP~W~vP~sI~~ 252 (431)
T Consensus 304 l~~l~~n~eRlR~lP-~dl~~r~i~VNiPA~~l~y~~~G~~vl~~rvVVGr~~rqTp~~~ski~~VvvNP~WnvP~SIi~ 382 (561)
T COG2989 304 LAQLALNLQRLRWLP-GDLGQRGIMVNIPAYSLEYYENGREVLRSRVVVGRPDRQTPVMNSKINNVVVNPYWNVPQSIIV 382 (561)
T ss_pred HHHHHHHHHHHHHCC-CCCCCCEEEEECCHHEEEEEECCCEEEEEEEEECCCCCCCCCHHHHHCEEEECCCCCCCHHHHH
T ss_conf 999999899986076-5568742898545010366768808998778865788877304524021674799888688998
Q ss_pred HHHHHHHHHCHHHHHHCCEEEECCCCCEECCCCCCCC-CCCCCCCCEEECCCCCCCCEEEEEECCCCCEEEECCCCCHHH
Q ss_conf 7777776418677874993999389978350204701-044577224726899986314895315887668138898323
Q gi|254780350|r 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN-SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331 (431)
Q Consensus 253 ~eilpk~~~dp~yl~~~~~~i~~~~g~~vdp~~i~w~-~~~~~~~~~rQ~PGp~NaLG~vkf~f~N~~~iyLHdTP~~~l 331 (431)
T Consensus 383 kdilPk~r~DP~YL~rngy~v~~g~G~~V~p~~VdW~i~~~~~~~r~RQ~Pg~~NALG~~Kinfpn~~aIYmHDTP~ksl 462 (561)
T COG2989 383 KDILPKVRKDPGYLDRNGYEVIDGWGEVVDPSAVDWSITGSNFPYRFRQAPGPDNALGSYKFNFPNSHAIYLHDTPSKSL 462 (561)
T ss_pred HHHHHHHHCCCHHHHHCCEEEECCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCHHHEECCCCCCCCEEEECCCCHHH
T ss_conf 76405542392558768838985888565743256311577786024568863011110410478976235206861555
Q ss_pred CCCCCCCCCCCCEECCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEEEEEEECCCCCEEEECCCCC
Q ss_conf 28655554115034479899999984048899989999986259828996589886899999989879983888368574
Q gi|254780350|r 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411 (431)
Q Consensus 332 F~~~~Ra~ShGCVRv~np~~La~~ll~~~~~~~~~~i~~~~~~~~~~~v~l~~~iPV~i~Y~Taw~~~dG~v~fr~DiY~ 411 (431)
T Consensus 463 F~r~mRalSsGCVRvq~~rdla~~lL~d-~Gws~~~v~~~ik~g~t~~i~v~~~vPVyl~Y~TAW~~~dG~vqfrdDIY~ 541 (561)
T COG2989 463 FNRDMRALSSGCVRVQKPRDLANALLKD-PGWSVDRVEETLKSGKTTPIKVRQPVPVYLYYFTAWVTKDGVVQFRDDIYG 541 (561)
T ss_pred HHHHHHHHCCCCEEECCHHHHHHHHHHC-CCCCHHHHHHHHCCCCCEEEECCCCCCEEEEEEEEEECCCCCEEECCCCCC
T ss_conf 6657777535855744889999999855-798889987674168840200377786799999977779985573563000
Q ss_pred HHHHHHHHHH
Q ss_conf 4589898861
Q gi|254780350|r 412 LDNVHVGIIP 421 (431)
Q Consensus 412 ~D~~~~~~~~ 421 (431)
T Consensus 542 ~D~~~~~a~~ 551 (561)
T COG2989 542 YDGYAELALQ 551 (561)
T ss_pred CCHHHHHHHH
T ss_conf 1348877656