HHsearch alignment for GI: 254780350 and conserved domain: PRK12472
>PRK12472 hypothetical protein; Provisional.
Probab=98.26 E-value=9.3e-07 Score=61.37 Aligned_cols=121 Identities=19% Similarity=0.208 Sum_probs=77.2
Q ss_pred CHHHHHHCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHCCEE
Q ss_conf 23454204524899998885555412313887777855421003898448778876677777777764186778749939
Q gi|254780350|r 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272 (431)
Q Consensus 193 ~~~v~VNip~~~l~~~e~g~~~~~~~viVGk~~~~TP~~~~~i~~iv~NP~W~vP~sI~~~eilpk~~~dp~yl~~~~~~ 272 (431)
T Consensus 56 Pi~aiVSi~~Q~vt~YDa~G~~~~apVSTG~~G~~TP~GVFsii--qK~-k~H------------------------rS- 107 (512)
T PRK12472 56 PIMAIVSIKSQQVTLYDADGWILRAPVSTGTTGRETPAGVFAIV--EKD-KDH------------------------HS- 107 (512)
T ss_pred CEEEEEEECCCEEEEECCCCEEEECCCCCCCCCCCCCCEEEEEE--ECC-CHH------------------------HH-
T ss_conf 65999985132689981687289655347877787775345664--215-202------------------------20-
Q ss_pred EECCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCEEEECCCCCHHHCCCCCCCCCCCCEECCCHHHH
Q ss_conf 99389978350204701044577224726899986314895315887668138898323286555541150344798999
Q gi|254780350|r 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352 (431)
Q Consensus 273 i~~~~g~~vdp~~i~w~~~~~~~~~~rQ~PGp~NaLG~vkf~f~N~~~iyLHdTP~~~lF~~~~Ra~ShGCVRv~np~~L 352 (431)
T Consensus 108 ----------------niY~~A~MP~MQR-----------iTWs---GiALH~G~lPGY------pASHGCvRm--P~~F 149 (512)
T PRK12472 108 ----------------TMYDDAWMPNMQR-----------ITWN---GVALHGGPLPGY------AASHGCVRM--PYGF 149 (512)
T ss_pred ----------------CCCCCCCCCCEEE-----------EEEC---CEEECCCCCCCC------CCCCCCCCC--CHHH
T ss_conf ----------------3347888750001-----------2121---223216778998------676762427--6589
Q ss_pred HHHHHCCCCCCCHHHHHHHHHCCCEEEEECC
Q ss_conf 9998404889998999998625982899658
Q gi|254780350|r 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLA 383 (431)
Q Consensus 353 a~~ll~~~~~~~~~~i~~~~~~~~~~~v~l~ 383 (431)
T Consensus 150 A~~lf----~~T~~G~RViv~p~d~aPv~fs 176 (512)
T PRK12472 150 AEKLF----DKTRIGMRVIISPNDAAPVDFS 176 (512)
T ss_pred HHHHH----HHCCCCCEEEECCCCCCCCCCC
T ss_conf 99874----0002663799537877764457