HHsearch alignment for GI: 254780350 and conserved domain: pfam01471
>pfam01471 PG_binding_1 Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
Probab=99.18 E-value=4.1e-11 Score=88.29 Aligned_cols=57 Identities=35% Similarity=0.406 Sum_probs=52.4
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 88248999999998198665678776457899999999999808887870299999884
Q gi|254780350|r 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165 (431)
Q Consensus 107 ~~~~V~~Lr~RL~~~Gdl~~~~~~~~~yD~~l~~AVk~FQ~rhGL~~DGvig~~Tl~aL 165 (431)
T Consensus 1 ~~~~V~~lQ~~L~~~Gy~~--~~~dg~~~~~t~~Av~~fQ~~~gL~~tG~~~~~T~~~L 57 (57)
T pfam01471 1 SGEDVKELQRYLKRLGYYP--GPVDGVFGPSTEAAVKAFQRFFGLPVTGIVDPETLAAL 57 (57)
T ss_pred CHHHHHHHHHHHHHCCCCC--CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCC
T ss_conf 9899999999999977999--99999688899999999999959999887699999619