HHsearch alignment of GI: 254780350 and MMDB domain: 1l6j_A_1-88

>1l6j_A (A:1-88) Matrix metalloproteinase-9; twisted beta sheet flanked by helices, hydrolase; 2.50A {Homo sapiens}

Probab=98.38  E-value=8.5e-07  Score=61.21  Aligned_cols=74  Identities=26%  Similarity=0.209  Sum_probs=62.5

Q ss_pred             CCCC-CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC
Q ss_conf             9854-777741468888248999999998198665678776457899999999999808887870299999884489
Q gi|254780350|r   93 GWPE-LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP  168 (431)
Q Consensus        93 gW~~-i~~~~L~~G~~~~~V~~Lr~RL~~~Gdl~~~~~~~~~yD~~l~~AVk~FQ~rhGL~~DGvig~~Tl~aLN~~  168 (431)
                      .|+. ....+..+......+....+-|...||+...  ....++..+.+||+.||+-.||++||.+|.+|++.|+.|
T Consensus         4 ~~~~~~~~~p~~~~~~~~~~~~a~~yL~~fGYl~~~--~~~~~~~~~~~ai~~fQ~~~~L~~TG~lD~~T~~~m~~P   78 (88)
T 1l6j_A            4 QRQSTLVLFPGDLRTNLTDRQLAEEYLYRYGYTRVA--EMRGESKSLGPALLLLQKQLSLPETGELDSATLKAMRTP   78 (88)
T ss_dssp             ------CCCTTCCCCCCCHHHHHHHHHHHTTCC-------------CHHHHHHHHHHHTCCCCSSCCHHHHHHHTSC
T ss_pred             CCCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCC--CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC
T ss_conf             779951327887556876699999999974999987--667763899999999999749997768399999987578