HHsearch results for GI: 254780350 and protein with PDBid: 1zat_A
>1zat_A L,D-transpeptidase; L,D-transpeptidation, peptidoglycan, beta-lactam insensitive transpeptidase, antibiotic resistance, transferase; 2.40A {Enterococcus faecium} SCOP: b.160.1.1 d.335.1.1 PDB: 2hkl_A
Probab=99.68 E-value=2.3e-17 Score=125.57 Aligned_cols=117 Identities=13% Similarity=0.097 Sum_probs=93.1
Q ss_pred CCCCCCHHHHHHCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCHHHHH
Q ss_conf 56765234542045248999988855554123138877778554210038984487788766777777777641867787
Q gi|254780350|r 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267 (431)
Q Consensus 188 ~~~~~~~~v~VNip~~~l~~~e~g~~~~~~~viVGk~~~~TP~~~~~i~~iv~NP~W~vP~sI~~~eilpk~~~dp~yl~ 267 (431)
..++|++||.||+.+.+|.++++|++++.++|+.|+++++||.....|.....++.|..+..
T Consensus 121 ~~~~g~~yI~Vdl~~q~l~~y~~G~~v~~~~vstG~~~~~TP~G~~~I~~K~~~~~~~g~~~------------------ 182 (250)
T 1zat_A 121 HPLIEDTYIEVDLENQHMWYYKDGKVALETDIVSGKPTTPTPAGVFYVWNKEEDATLKGTND------------------ 182 (250)
T ss_dssp SCSSCSCEEEEETTTTEEEEEETTEEEEEEECBCBCTTSCCCCEEEECCCCEEEEECCBCC-------------------
T ss_pred CCCCCCCEEEEECCCCEEEEEECCEEEEEEEEECCCCCCCCCEEEEEEEEEECCCEEECCCC------------------
T ss_conf 88878839999950199999999999999877728899722228999888974977705689------------------
Q ss_pred HCCEEEECCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCEEEECCCCCHHHCCCC--CCCCCCCCEE
Q ss_conf 49939993899783502047010445772247268999863148953158876681388983232865--5554115034
Q gi|254780350|r 268 DNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV--VRFETSGCVR 345 (431)
Q Consensus 268 ~~~~~i~~~~g~~vdp~~i~w~~~~~~~~~~rQ~PGp~NaLG~vkf~f~N~~~iyLHdTP~~~lF~~~--~Ra~ShGCVR 345 (431)
++++.++.+..|+.|.+. +|+|||||.+..|+.. .+..||||||
T Consensus 183 ---------------------------------~~~~y~~~~~~~~~~~~~-gi~iHgt~~~~~~g~~~~~~~~SHGCIr 228 (250)
T 1zat_A 183 ---------------------------------DGTPYESPVNYWMPIDWT-GVGIHDSDWQPEYGGDLWKTRGSHGCIN 228 (250)
T ss_dssp ----------------------------------CCCBCCEEEEEEECSSS-SCEEEECTTCSCCSTTHHHHHCBSSSEE
T ss_pred ---------------------------------CCCCCCCCCCEEEECCCC-EEEEECCCCCCCCCCCCCCCCCCCCEEC
T ss_conf ---------------------------------888767776358843797-6999689973112435678878986818
Q ss_pred CCCHHHHHHHHHC
Q ss_conf 4798999999840
Q gi|254780350|r 346 VRNIIDLDVWLLK 358 (431)
Q Consensus 346 v~np~~La~~ll~ 358 (431)
|.+. -|.||..
T Consensus 229 l~~~--da~~ly~ 239 (250)
T 1zat_A 229 TPPS--VMKELFG 239 (250)
T ss_dssp ECHH--HHHHHHH
T ss_pred CCHH--HHHHHHH
T ss_conf 7999--9999995