HHSEARCH alignment of GI: 254780350 and SCOP domain: d2ikba1

Alignment

Probab=96.06  E-value=0.0033  Score=36.61  Aligned_cols=53  Identities=26%  Similarity=0.388  Sum_probs=37.7

Q ss_pred             CCCCHHH----HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCC
Q ss_conf             6457899----99999999980888787029999988448988988898640775303
Q gi|254780350|r  132 VAFDAYV----ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK  185 (431)
Q Consensus       132 ~~yD~~l----~~AVk~FQ~rhGL~~DGvig~~Tl~aLN~~~~~r~~qi~~nler~r~  185 (431)
                      .+||..+    ..|+|-.|+.-|+++||+|||+|+++++.-....+ ...++.+|..+
T Consensus        80 ~~FD~aVN~G~~~A~k~LQ~al~v~vDGiiGp~Tl~Al~~~~~~~l-~~~~~~~R~~~  136 (163)
T d2ikba1          80 QFFDACVNHGYGNAARMLQRAAGVPDDGVIGAVSLKAINSLPENDL-LLRFNAERLVF  136 (163)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHHTTSCCSSCCCHHHHHHHHHSCHHHH-HHHHHHHHHHH
T ss_pred             HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHH-HHHHHHHHHHH
T ss_conf             9985734288517999999983865235638888999982496999-99999999999

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: NMB1012-like
domain: Hypothetical protein NMB1012
species: Neisseria meningitidis [TaxId: 487]