HHsearch alignment for GI: 254780351 and conserved domain: COG1378
>COG1378 Predicted transcriptional regulators [Transcription].
Probab=96.63 E-value=0.04 Score=33.58 Aligned_cols=52 Identities=17% Similarity=0.052 Sum_probs=45.3
Q ss_pred CCCCHHHHHHH-HHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf 79999999999-99321796889999985477105679999999778878863
Q gi|254780351|r 53 SDVNAVQALLL-FNIGDLELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQR 104 (171)
Q Consensus 53 ~~l~~~q~~~L-~~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~ 104 (171)
T Consensus 12 lGlt~yEa~vY~aLl~~g~~tA~eis~~sgvP~~kvY~vl~sLe~kG~v~~~~ 64 (247)
T COG1378 12 LGLTEYEAKVYLALLCLGEATAKEISEASGVPRPKVYDVLRSLEKKGLVEVIE 64 (247)
T ss_pred CCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCEEECC
T ss_conf 19978899999999981887799999865999322999999998788778407