HHsearch alignment for GI: 254780351 and conserved domain: COG1378

>COG1378 Predicted transcriptional regulators [Transcription].
Probab=96.63  E-value=0.04  Score=33.58  Aligned_cols=52  Identities=17%  Similarity=0.052  Sum_probs=45.3

Q ss_pred             CCCCHHHHHHH-HHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf             79999999999-99321796889999985477105679999999778878863
Q gi|254780351|r   53 SDVNAVQALLL-FNIGDLELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQR  104 (171)
Q Consensus        53 ~~l~~~q~~~L-~~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~  104 (171)
T Consensus        12 lGlt~yEa~vY~aLl~~g~~tA~eis~~sgvP~~kvY~vl~sLe~kG~v~~~~   64 (247)
T COG1378          12 LGLTEYEAKVYLALLCLGEATAKEISEASGVPRPKVYDVLRSLEKKGLVEVIE   64 (247)
T ss_pred             CCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCEEECC
T ss_conf             19978899999999981887799999865999322999999998788778407