HHsearch alignment for GI: 254780351 and conserved domain: COG1414
>COG1414 IclR Transcriptional regulator [Transcription].
Probab=96.44 E-value=0.0075 Score=38.23 Aligned_cols=57 Identities=26% Similarity=0.310 Sum_probs=42.1
Q ss_pred HHHHHHCC--CCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHH
Q ss_conf 99993217--968899999854771056799999997788788636100710564457889999
Q gi|254780351|r 62 LLFNIGDL--ELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSGKEI 123 (171)
Q Consensus 62 ~L~~~~~~--~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i~LT~~G~~~ 123 (171)
T Consensus 9 iL~~l~~~~~~l~l~ela~~~glpksT~~RlL~tL~~~G~v~~d~~--~gr---Y~Lg~~~~~l 67 (246)
T COG1414 9 ILDLLAEGPGGLSLAELAERLGLPKSTVHRLLQTLVELGYVEQDPE--DGR---YRLGPRLLEL 67 (246)
T ss_pred HHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCC--CCE---EEECHHHHHH
T ss_conf 9999971888887999999879198899999999997898889799--996---9857899998