HHsearch alignment for GI: 254780351 and conserved domain: COG1497
>COG1497 Predicted transcriptional regulator [Transcription].
Probab=97.80 E-value=0.00033 Score=46.93 Aligned_cols=70 Identities=21% Similarity=0.274 Sum_probs=57.0
Q ss_pred CCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHH-HHHHHH
Q ss_conf 9999999999993217968899999854771056799999997788788636100710564457889999-999999
Q gi|254780351|r 54 DVNAVQALLLFNIGDLELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSGKEI-AETISQ 129 (171)
Q Consensus 54 ~l~~~q~~~L~~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i~LT~~G~~~-~~~~~~ 129 (171)
T Consensus 9 ~~t~fqIL~ei~~~qp~v~q~eIA~~lgiT~QaVsehiK~Lv~eG~i~~-----~gR~~Y-~iTkkG~e~l~~~~~d 79 (260)
T COG1497 9 NLTRFQILSEIAVRQPRVKQKEIAKKLGITLQAVSEHIKELVKEGLIEK-----EGRGEY-EITKKGAEWLLEQLSD 79 (260)
T ss_pred CCHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEE-----CCCEEE-EEEHHHHHHHHHHHHH
T ss_conf 3159899999997588778889998709879999999999986646661-----487258-9726689999999999