HHsearch alignment for GI: 254780351 and conserved domain: COG1725
>COG1725 Predicted transcriptional regulators [Transcription].
Probab=96.37 E-value=0.06 Score=32.42 Aligned_cols=77 Identities=21% Similarity=0.258 Sum_probs=55.7
Q ss_pred CCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHHHHHH-----HHHHHHHHHHHHHCCCC
Q ss_conf 6889999985477105679999999778878863610071056445788999999999-----99999999998534999
Q gi|254780351|r 71 LTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSGKEIAETIS-----QLYQRHIESIDKVGGLS 145 (171)
Q Consensus 71 ~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~-----~~~~~~~~~l~~~~~ls 145 (171)
T Consensus 36 PSvRelA~~~~VNpnTv~raY~eLE~eG~i~t~------rg~G~fV~~~~~~~~~~~~~~~~~~~l~~~I~~~~~-~G~s 108 (125)
T COG1725 36 PSVRELAKDLGVNPNTVQRAYQELEREGIVETK------RGKGTFVTEDAKEILDQLKRELAEEELEEFIEEAKA-LGLS 108 (125)
T ss_pred CCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEE------CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH-CCCC
T ss_conf 759999998198988999999999978877986------670579747714557887899999999999999998-6998
Q ss_pred HHHHHHHHH
Q ss_conf 899999999
Q gi|254780351|r 146 VDDFIAMNK 154 (171)
Q Consensus 146 ~ee~~~l~~ 154 (171)
T Consensus 109 ~eei~~~~~ 117 (125)
T COG1725 109 LEEILELLK 117 (125)
T ss_pred HHHHHHHHH
T ss_conf 999999999