HHsearch alignment for GI: 254780351 and conserved domain: COG1777

>COG1777 Predicted transcriptional regulators [Transcription].
Probab=92.31  E-value=0.28  Score=28.17  Aligned_cols=62  Identities=13%  Similarity=0.116  Sum_probs=47.2

Q ss_pred             HHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCC------------CEEEEEECHHH
Q ss_conf             999999932179688999998547710567999999977887886361007------------10564457889
Q gi|254780351|r   59 QALLLFNIGDLELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDK------------RSIRISLTQSG  120 (171)
Q Consensus        59 q~~~L~~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~------------R~~~i~LT~~G  120 (171)
T Consensus        17 RR~Il~lLt~~p~yvsEiS~~lgvsqkAVl~HL~~LE~AGlveS~ie~~~Rg~~rKYY~Is~~~rleV~lsp~~   90 (217)
T COG1777          17 RRRILQLLTRRPCYVSEISRELGVSQKAVLKHLRILERAGLVESRIEKIPRGRPRKYYMISRNLRLEVTLSPNF   90 (217)
T ss_pred             HHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEECCCCEEEEEEECCCC
T ss_conf             99999998547139998776608678999999999998587121203332688762265067707999964762