HHsearch alignment for GI: 254780351 and conserved domain: COG1959

>COG1959 Predicted transcriptional regulator [Transcription].

Probab=94.62  E-value=0.12  Score=30.54  Aligned_cols=40  Identities=23%  Similarity=0.229  Sum_probs=37.1

Q ss_pred             CCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf             9688999998547710567999999977887886361007
Q gi|254780351|r   70 ELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDK  109 (171)
Q Consensus        70 ~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~  109 (171)
T Consensus        25 ~~s~~~IA~~~~is~~~L~kil~~L~kaGlV~S~rG~~GG   64 (150)
T COG1959          25 PVSSAEIAERQGISPSYLEKILSKLRKAGLVKSVRGKGGG   64 (150)
T ss_pred             CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCC
T ss_conf             4649999999891999999999999877987852079989